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ONTOLOGY REPORT - ANNOTATIONS

Term:production of molecular mediator of immune response
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Accession:GO:0002440 term browser browse the term
Definition:The synthesis or release of any molecular mediator of the immune response, resulting in an increase in its intracellular or extracellular levels.
Comment:Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select one of the 'regulation' children terms.
Synonyms:related_synonym: production of cellular mediator of immune response


show annotations for term's descendants           Sort by:
antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgals4 lectin, galactose binding, soluble 4 acts_upstream_of_or_within IDA (PMID:27427436) MGI PMID:27427436 NCBI chr 7:28,533,559...28,541,128
Ensembl chr 7:28,533,279...28,541,133 		JBrowse link
G Lgals6 lectin, galactose binding, soluble 6 acts_upstream_of_or_within IDA (PMID:27427436) MGI PMID:27427436
G Mmp7 matrix metallopeptidase 7 acts_upstream_of_or_within IMP (PMID:20056603) MGI PMID:20056603 NCBI chr 9:7,692,095...7,699,587
Ensembl chr 9:7,692,091...7,699,587 		JBrowse link
antibacterial peptide secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp7 matrix metallopeptidase 7 acts_upstream_of_or_within IMP (PMID:11248802) MGI PMID:11248802 NCBI chr 9:7,692,095...7,699,587
Ensembl chr 9:7,692,091...7,699,587 		JBrowse link
B cell affinity maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton agammaglobulinemia tyrosine kinase acts_upstream_of_or_within IMP (PMID:7680896) MGI PMID:7680896 NCBI chr  X:133,443,083...133,484,366
Ensembl chr  X:133,443,085...133,484,319 		JBrowse link
G Ighm immunoglobulin heavy constant mu acts_upstream_of_or_within IMP (PMID:9707605) MGI PMID:9707605 NCBI chr12:113,382,446...113,386,350
Ensembl chr12:113,382,178...113,386,350 		JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 involved_in IMP (PMID:20543113) MGI PMID:20543113 NCBI chr10:39,488,930...39,531,303
Ensembl chr10:39,488,930...39,531,303 		JBrowse link
biosynthetic process of antibacterial peptides active against Gram-negative bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elane elastase, neutrophil expressed involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr10:79,722,146...79,724,050
Ensembl chr10:79,722,081...79,724,049 		JBrowse link
biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of IMP (PMID:15692051) MGI PMID:15692051 NCBI chr 8:89,373,943...89,415,103
Ensembl chr 8:89,373,943...89,415,102 		JBrowse link
immunoglobulin heavy chain V-D-J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in TAS (PMID:23531880) MGI PMID:23531880 NCBI chr 6:47,507,208...47,613,843
Ensembl chr 6:47,507,073...47,572,275 		JBrowse link
G Polb polymerase (DNA directed), beta acts_upstream_of_or_within IMP (PMID:24388753) MGI PMID:24388753 NCBI chr 8:23,118,135...23,143,482
Ensembl chr 8:23,118,142...23,143,451 		JBrowse link
G Yy1 YY1 transcription factor involved_in IMP (PMID:23531880) MGI PMID:23531880 NCBI chr12:108,758,841...108,786,074
Ensembl chr12:108,758,899...108,786,074 		JBrowse link
immunoglobulin production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkdc protein kinase, DNA activated, catalytic polypeptide ISO RGD PMID:22981234 RGD:8696027 NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099 		JBrowse link
immunoglobulin V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyren cell cycle regulator of NHEJ involved_in IMP (PMID:30017584), (PMID:31795137) UniProt PMID:30017584 PMID:31795137 NCBI chr 6:34,848,706...34,855,024
Ensembl chr 6:34,848,706...34,854,995 		JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within IMP (PMID:16819554) MGI PMID:16819554 NCBI chr 6:98,902,303...99,510,587
Ensembl chr 6:98,902,299...99,499,682 		JBrowse link
G Lig4 ligase IV, DNA, ATP-dependent involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:9823897) GO_Central
MGI		 PMID:9823897 GO_REF:0000033 NCBI chr 8:10,020,020...10,027,680
Ensembl chr 8:10,019,049...10,027,686 		JBrowse link
G Nhej1 non-homologous end joining factor 1 involved_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr 1:75,006,505...75,101,870
Ensembl chr 1:75,006,298...75,101,844 		JBrowse link
G Prkdc protein kinase, DNA activated, catalytic polypeptide acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:9768755) MGI
GO_Central		 PMID:9768755 GO_REF:0000033 NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099 		JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within
involved_in		 IMP
IBA
ISO		 (PMID:16428437) MGI
GO_Central		 PMID:16428437 GO_REF:0000033 NCBI chr10:80,245,375...80,269,814
Ensembl chr10:80,245,348...80,269,481 		JBrowse link
G Xrcc4 X-ray repair complementing defective repair in Chinese hamster cells 4 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:9875844) MGI
GO_Central		 PMID:9875844 GO_REF:0000033 NCBI chr13:89,997,033...90,237,727
Ensembl chr13:89,922,146...90,237,727 		JBrowse link
isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase acts_upstream_of_or_within
involved_in		 IMP (PMID:17713479)
(PMID:21518874)		 MGI
UniProt		 PMID:17713479 PMID:21518874 NCBI chr 6:122,530,768...122,541,139
Ensembl chr 6:122,530,760...122,541,139 		JBrowse link
G Atad5 ATPase family, AAA domain containing 5 acts_upstream_of IMP (PMID:25404367) MGI PMID:25404367 NCBI chr11:79,980,205...80,026,623
Ensembl chr11:79,980,226...80,026,620 		JBrowse link
G Batf basic leucine zipper transcription factor, ATF-like involved_in IMP (PMID:20421391), (PMID:21572431) UniProt PMID:20421391 PMID:21572431 NCBI chr12:85,733,494...85,755,861
Ensembl chr12:85,733,443...85,755,861 		JBrowse link
G Cd40lg CD40 ligand involved_in IDA (PMID:7529792) UniProt PMID:7529792 NCBI chr  X:56,257,448...56,269,402
Ensembl chr  X:56,257,503...56,269,402 		JBrowse link
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 acts_upstream_of_or_within IMP (PMID:15280420) MGI PMID:15280420 NCBI chr 7:19,079,016...19,090,449
Ensembl chr 7:19,078,703...19,090,449 		JBrowse link
G Exo1 exonuclease 1 acts_upstream_of_or_within IMP (PMID:14716311) MGI PMID:14716311 NCBI chr 1:175,708,334...175,738,962
Ensembl chr 1:175,708,147...175,741,055 		JBrowse link
G Exosc3 exosome component 3 involved_in IMP (PMID:21255825) UniProt PMID:21255825 NCBI chr 4:45,316,613...45,320,616
Ensembl chr 4:45,316,613...45,342,732 		JBrowse link
G Exosc6 exosome component 6 involved_in IMP (PMID:21255825) UniProt PMID:21255825 NCBI chr 8:111,782,971...111,784,296
Ensembl chr 8:111,782,971...111,784,296 		JBrowse link
G Icosl icos ligand involved_in NAS (PMID:11343122) UniProt PMID:11343122 NCBI chr10:77,904,921...77,915,359
Ensembl chr10:77,905,136...77,919,747 		JBrowse link
G Lig4 ligase IV, DNA, ATP-dependent acts_upstream_of_or_within IMP (PMID:17713479) MGI PMID:17713479 NCBI chr 8:10,020,020...10,027,680
Ensembl chr 8:10,019,049...10,027,686 		JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within IMP (PMID:12743174) MGI PMID:12743174 NCBI chr 9:111,057,296...111,100,854
Ensembl chr 9:111,057,296...111,100,859 		JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within IMP (PMID:10430621)
(PMID:12743174)		 MGI PMID:10430621 PMID:12743174 NCBI chr17:87,979,960...88,031,141
Ensembl chr17:87,979,758...88,031,141 		JBrowse link
G Msh6 mutS homolog 6 acts_upstream_of_or_within IGI
IMP		 (PMID:17015724)
(PMID:16618598)		 MGI PMID:16618598 PMID:17015724 NCBI chr17:88,282,478...88,298,320
Ensembl chr17:88,282,490...88,298,320 		JBrowse link
G Nbn nibrin involved_in IDA (PMID:15668383) UniProt PMID:15668383 NCBI chr 4:15,955,388...15,992,589
Ensembl chr 4:15,957,925...15,992,589 		JBrowse link
G Nfkbiz nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta involved_in IMP (PMID:25124037)
(PMID:31182790)		 MGI PMID:25124037 PMID:31182790 NCBI chr16:55,631,740...55,659,018
Ensembl chr16:55,631,738...55,659,262 		JBrowse link
G Pcyt1a phosphate cytidylyltransferase 1, choline, alpha isoform involved_in IMP (PMID:19139091) UniProt PMID:19139091 NCBI chr16:32,249,739...32,293,883
Ensembl chr16:32,249,739...32,293,888 		JBrowse link
G Rnf168 ring finger protein 168 involved_in IMP (PMID:20080757) UniProt PMID:20080757 NCBI chr16:32,096,279...32,120,260
Ensembl chr16:32,096,277...32,120,252 		JBrowse link
G Rnf8 ring finger protein 8 involved_in IMP (PMID:20080757) UniProt PMID:20080757 NCBI chr17:29,833,763...29,860,638
Ensembl chr17:29,833,764...29,863,965 		JBrowse link
G Sanbr SANT and BTB domain regulator of CSR involved_in IDA
IBA		 (PMID:33831416) UniProt
GO_Central		 PMID:33831416 GO_REF:0000033 NCBI chr11:23,514,949...23,596,409
Ensembl chr11:23,514,961...23,583,631 		JBrowse link
G Swap70 SWA-70 protein acts_upstream_of_or_within IDA (PMID:9642267) MGI PMID:9642267 NCBI chr 7:109,820,890...109,882,720
Ensembl chr 7:109,820,918...109,882,713 		JBrowse link
G Ung uracil DNA glycosylase acts_upstream_of_or_within IGI (PMID:17015724) MGI PMID:17015724 NCBI chr 5:114,268,427...114,277,382
Ensembl chr 5:114,268,447...114,277,384 		JBrowse link
G Xrcc4 X-ray repair complementing defective repair in Chinese hamster cells 4 acts_upstream_of_or_within IMP (PMID:17713479) MGI PMID:17713479 NCBI chr13:89,997,033...90,237,727
Ensembl chr13:89,922,146...90,237,727 		JBrowse link
isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr6 C-C motif chemokine receptor 6 involved_in IMP (PMID:27174992) UniProt PMID:27174992 NCBI chr17:8,454,875...8,477,353
Ensembl chr17:8,454,875...8,475,973 		JBrowse link
isotype switching to IgD isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdcsp follicular dendritic cell secreted protein acts_upstream_of_positive_effect IMP (PMID:17548624) MGI PMID:17548624 NCBI chr 5:88,056,638...88,062,030
Ensembl chr 5:88,056,638...88,062,030 		JBrowse link
isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 B cell leukemia/lymphoma 6 acts_upstream_of IMP
IGI		 (PMID:10490661) MGI PMID:10490661 NCBI chr16:23,780,058...23,807,602
Ensembl chr16:23,783,802...23,807,602 		JBrowse link
G Fdcsp follicular dendritic cell secreted protein acts_upstream_of_or_within_negative_effect IMP (PMID:17548624) MGI PMID:17548624 NCBI chr 5:88,056,638...88,062,030
Ensembl chr 5:88,056,638...88,062,030 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of IMP (PMID:16275384) MGI PMID:16275384 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484 		JBrowse link
G Il4 interleukin 4 acts_upstream_of IDA (PMID:14988498) MGI PMID:14988498 NCBI chr11:53,503,287...53,509,492
Ensembl chr11:53,493,809...53,509,496 		JBrowse link
G Stat6 signal transducer and activator of transcription 6 acts_upstream_of IGI (PMID:10490661) MGI PMID:10490661 NCBI chr10:127,478,855...127,496,856
Ensembl chr10:127,478,855...127,496,826 		JBrowse link
isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdcsp follicular dendritic cell secreted protein acts_upstream_of_or_within_negative_effect IMP (PMID:17548624) MGI PMID:17548624 NCBI chr 5:88,056,638...88,062,030
Ensembl chr 5:88,056,638...88,062,030 		JBrowse link
G Hspd1 heat shock protein 1 (chaperonin) involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 1:55,116,992...55,127,402
Ensembl chr 1:55,116,994...55,127,402 		JBrowse link
G Il4 interleukin 4 acts_upstream_of IDA (PMID:14988498) MGI PMID:14988498 NCBI chr11:53,503,287...53,509,492
Ensembl chr11:53,493,809...53,509,496 		JBrowse link
negative regulation of cytokine production involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angpt1 angiopoietin 1 acts_upstream_of_or_within IDA (PMID:20060382) MGI PMID:20060382 NCBI chr15:42,288,063...42,540,373
Ensembl chr15:42,288,119...42,540,373 		JBrowse link
G Apoa1 apolipoprotein A-I involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 9:46,139,928...46,141,767
Ensembl chr 9:46,139,878...46,141,764 		JBrowse link
G Apoa2 apolipoprotein A-II involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 1:171,049,133...171,053,948
Ensembl chr 1:171,052,623...171,053,948 		JBrowse link
G Il10 interleukin 10 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711 		JBrowse link
G Mir302a microRNA 302a acts_upstream_of ISO (PMID:29046356) ARUK-UCL PMID:29046356 NCBI chr 3:127,339,145...127,339,213
Ensembl chr 3:127,339,145...127,339,213 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983 		JBrowse link
negative regulation of dendritic cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jak3 Janus kinase 3 involved_in IMP (PMID:16020505) BHF-UCL PMID:16020505 NCBI chr 8:72,129,027...72,143,221
Ensembl chr 8:72,128,940...72,143,219 		JBrowse link
negative regulation of immunoglobulin production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd22 CD22 antigen involved_in IGI (PMID:20200274) ARUK-UCL PMID:20200274 NCBI chr 7:30,564,829...30,579,767
Ensembl chr 7:30,564,827...30,579,767 		JBrowse link
G Fcgr2b Fc receptor, IgG, low affinity IIb acts_upstream_of_or_within IMP (PMID:12385742) MGI PMID:12385742 NCBI chr 1:170,786,186...170,804,141
Ensembl chr 1:170,786,186...170,804,116 		JBrowse link
G Ifnb1 interferon beta 1, fibroblast involved_in ISO RGD
GO_Central		 PMID:10494101 GO_REF:0000096 RGD:401854240 NCBI chr 4:88,440,253...88,441,083
Ensembl chr 4:88,440,262...88,441,011 		JBrowse link
G Il13ra2 interleukin 13 receptor, alpha 2 acts_upstream_of_or_within IMP (PMID:15944273) MGI PMID:15944273 NCBI chr  X:146,166,474...146,214,982
Ensembl chr  X:146,166,472...146,212,188 		JBrowse link
G Il33 interleukin 33 involved_in IGI (PMID:18268038) BHF-UCL PMID:18268038 NCBI chr19:29,902,513...29,938,118
Ensembl chr19:29,902,514...29,938,118 		JBrowse link
G Lilrb4a leukocyte immunoglobulin-like receptor, subfamily B, member 4A involved_in IMP (PMID:24935931) UniProt PMID:24935931 NCBI chr10:51,366,999...51,372,709
Ensembl chr10:51,367,052...51,372,707 		JBrowse link
G Prkdc protein kinase, DNA activated, catalytic polypeptide involved_in ISO
IEA		 RGD
Ensembl
GO_Central		 PMID:22981234 GO_REF:0000096 GO_REF:0000107 RGD:8696027 NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099 		JBrowse link
G Siglecg sialic acid binding Ig-like lectin G involved_in IGI (PMID:20200274) ARUK-UCL PMID:20200274 NCBI chr 7:43,057,623...43,067,773
Ensembl chr 7:43,057,628...43,067,782 		JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 involved_in IMP (PMID:19328063) ParkinsonsUK-UCL PMID:19328063 NCBI chr15:99,290,828...99,307,930
Ensembl chr15:99,290,763...99,307,930 		JBrowse link
G Vpreb3 V-set pre-B cell surrogate light chain 3 acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr10:75,778,859...75,785,491
Ensembl chr10:75,778,891...75,785,491 		JBrowse link
G Zpbp2 zona pellucida binding protein 2 acts_upstream_of_or_within IMP (PMID:29536159) MGI PMID:29536159 NCBI chr11:98,441,923...98,449,491
Ensembl chr11:98,441,923...98,449,491 		JBrowse link
negative regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp3 poly (ADP-ribose) polymerase family, member 3 involved_in IMP (PMID:26000965) UniProt PMID:26000965 NCBI chr 9:106,347,521...106,354,148
Ensembl chr 9:106,347,521...106,354,148 		JBrowse link
negative regulation of isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdcsp follicular dendritic cell secreted protein involved_in IMP (PMID:24399151) MGI PMID:24399151 NCBI chr 5:88,056,638...88,062,030
Ensembl chr 5:88,056,638...88,062,030 		JBrowse link
negative regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 B cell leukemia/lymphoma 6 acts_upstream_of_or_within IMP
IGI		 (PMID:10490661) MGI PMID:10490661 NCBI chr16:23,780,058...23,807,602
Ensembl chr16:23,783,802...23,807,602 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within IMP (PMID:16275384) MGI PMID:16275384 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within IMP (PMID:17137798) MGI PMID:17137798 NCBI chr18:38,551,960...38,598,250
Ensembl chr18:38,543,449...38,598,356 		JBrowse link
negative regulation of macrophage cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp5 acid phosphatase 5, tartrate resistant acts_upstream_of_or_within IMP (PMID:11168643) MGI PMID:11168643 NCBI chr 9:22,038,023...22,047,042
Ensembl chr 9:22,038,023...22,047,007 		JBrowse link
G Atg9a autophagy related 9A acts_upstream_of_or_within IMP (PMID:24670807) MGI PMID:24670807 NCBI chr 1:75,157,509...75,168,654
Ensembl chr 1:75,157,504...75,168,840 		JBrowse link
G Axl AXL receptor tyrosine kinase acts_upstream_of_or_within IGI (PMID:16831897) MGI PMID:16831897 NCBI chr 7:25,455,925...25,488,502
Ensembl chr 7:25,456,698...25,488,130 		JBrowse link
G Cuedc2 CUE domain containing 2 acts_upstream_of_or_within IMP
ISO		 (PMID:24882011) MGI PMID:24882011 GO_REF:0000008 NCBI chr19:46,318,251...46,327,144
Ensembl chr19:46,318,251...46,327,141 		JBrowse link
G Epx eosinophil peroxidase acts_upstream_of_or_within IMP (PMID:16926417) MGI PMID:16926417 NCBI chr11:87,754,824...87,766,362
Ensembl chr11:87,754,826...87,766,362 		JBrowse link
G Irak3 interleukin-1 receptor-associated kinase 3 involved_in IMP (PMID:12150927) BHF-UCL PMID:12150927 NCBI chr10:119,977,553...120,038,035
Ensembl chr10:119,977,553...120,038,035 		JBrowse link
G Nlrx1 NLR family member X1 acts_upstream_of_or_within IMP (PMID:21703540) MGI PMID:21703540 NCBI chr 9:44,164,010...44,179,896
Ensembl chr 9:44,164,014...44,179,896 		JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within IMP
IDA		 (PMID:15220916) MGI PMID:15220916 NCBI chr 8:89,373,943...89,415,103
Ensembl chr 8:89,373,943...89,415,102 		JBrowse link
G Prg2 proteoglycan 2, bone marrow acts_upstream_of_or_within IMP (PMID:16926417) MGI PMID:16926417 NCBI chr 2:84,810,805...84,813,977
Ensembl chr 2:84,810,805...84,813,976 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO
ISS		 GO_Central
AgBase		 GO_REF:0000024 GO_REF:0000119 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISS
ISO		 AgBase
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr12:86,103,517...86,125,815
Ensembl chr12:86,103,519...86,125,815 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IGI (PMID:16831897) MGI PMID:16831897 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
G Twist2 twist basic helix-loop-helix transcription factor 2 acts_upstream_of_or_within IGI
IMP		 (PMID:16831897) MGI PMID:16831897 NCBI chr 1:91,729,183...91,775,756
Ensembl chr 1:91,729,183...91,775,750 		JBrowse link
negative regulation of mast cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 B cell leukemia/lymphoma 6 acts_upstream_of_or_within IMP (PMID:15950739) MGI PMID:15950739 NCBI chr16:23,780,058...23,807,602
Ensembl chr16:23,783,802...23,807,602 		JBrowse link
G Hmox1 heme oxygenase 1 involved_in ISO RGD
GO_Central		 PMID:17234154 GO_REF:0000096 RGD:1601626 NCBI chr 8:75,820,246...75,827,221
Ensembl chr 8:75,820,249...75,827,217 		JBrowse link
G Rabgef1 RAB guanine nucleotide exchange factor (GEF) 1 acts_upstream_of_or_within IMP (PMID:16533754) MGI PMID:16533754 NCBI chr 5:130,200,644...130,243,178
Ensembl chr 5:130,200,639...130,243,183 		JBrowse link
negative regulation of natural killer cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd96 CD96 antigen acts_upstream_of_or_within IMP (PMID:24658051) MGI PMID:24658051 NCBI chr16:45,856,015...45,940,611
Ensembl chr16:45,856,020...45,940,614 		JBrowse link
G Gm7030 predicted gene 7030 involved_in ISO (PMID:24018270) UniProt PMID:24018270 NCBI chr17:36,438,501...36,440,317
Ensembl chr17:36,420,611...36,440,317 		JBrowse link
negative regulation of plasmacytoid dendritic cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bst2 bone marrow stromal cell antigen 2 involved_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr 8:71,986,899...71,990,116
Ensembl chr 8:71,986,899...71,990,100 		JBrowse link
negative regulation of T cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 involved_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484 		JBrowse link
G Gm7030 predicted gene 7030 involved_in ISO (PMID:24018270) UniProt PMID:24018270 NCBI chr17:36,438,501...36,440,317
Ensembl chr17:36,420,611...36,440,317 		JBrowse link
G Hfe homeostatic iron regulator involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr13:23,886,017...23,894,837
Ensembl chr13:23,886,017...23,894,837 		JBrowse link
G Lilrb4a leukocyte immunoglobulin-like receptor, subfamily B, member 4A involved_in ISO GO_Central GO_REF:0000119 NCBI chr10:51,366,999...51,372,709
Ensembl chr10:51,367,052...51,372,707 		JBrowse link
G Lilrb4b leukocyte immunoglobulin-like receptor, subfamily B, member 4B involved_in ISO GO_Central GO_REF:0000119 NCBI chr10:51,356,757...51,362,417
Ensembl chr10:51,356,728...51,362,799 		JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in IDA (PMID:11477403) UniProt PMID:11477403 NCBI chr 1:171,594,700...171,628,752
Ensembl chr 1:171,594,695...171,628,752 		JBrowse link
G Smad7 SMAD family member 7 involved_in IMP (PMID:25642768) BHF-UCL PMID:25642768 NCBI chr18:75,500,436...75,529,006
Ensembl chr18:75,500,600...75,529,006 		JBrowse link
G Vsir V-set immunoregulatory receptor acts_upstream_of_or_within IDA (PMID:21383057) MGI PMID:21383057 NCBI chr10:60,182,630...60,266,073
Ensembl chr10:60,182,630...60,208,463 		JBrowse link
G Xcl1 chemokine (C motif) ligand 1 involved_in ISO (PMID:10887101) BHF-UCL PMID:10887101 NCBI chr 1:164,759,216...164,763,094
Ensembl chr 1:164,759,213...164,763,096 		JBrowse link
negative regulation of T-helper 2 cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase, liver involved_in IMP (PMID:19360123) UniProt PMID:19360123 NCBI chr10:24,791,105...24,803,368
Ensembl chr10:24,791,119...24,803,382 		JBrowse link
G Ifnb1 interferon beta 1, fibroblast involved_in ISO GO_Central GO_REF:0000119 NCBI chr 4:88,440,253...88,441,083
Ensembl chr 4:88,440,262...88,441,011 		JBrowse link
G Tbx21 T-box 21 involved_in IMP
IDA		 (PMID:23616576)
(PMID:10761931)		 UniProt PMID:10761931 PMID:23616576 NCBI chr11:96,988,833...97,006,157
Ensembl chr11:96,988,897...97,006,157 		JBrowse link
positive regulation of antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within IDA (PMID:18167348) MGI PMID:18167348 NCBI chr 8:89,373,943...89,415,103
Ensembl chr 8:89,373,943...89,415,102 		JBrowse link
positive regulation of antibacterial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klk5 kallikrein related-peptidase 5 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 7:43,483,581...43,500,605
Ensembl chr 7:43,491,395...43,500,605 		JBrowse link
G Klk7 kallikrein related-peptidase 7 (chymotryptic, stratum corneum) involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 7:43,460,718...43,465,811
Ensembl chr 7:43,460,718...43,465,783 		JBrowse link
G Pgc progastricsin (pepsinogen C) involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr17:48,037,767...48,045,403
Ensembl chr17:48,037,767...48,045,407 		JBrowse link
positive regulation of antimicrobial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il17a interleukin 17A involved_in IDA (PMID:19144317) UniProt PMID:19144317 NCBI chr 1:20,801,129...20,804,720
Ensembl chr 1:20,801,129...20,804,720 		JBrowse link
G Il17f interleukin 17F involved_in IDA (PMID:19144317) UniProt PMID:19144317 NCBI chr 1:20,847,370...20,855,498
Ensembl chr 1:20,847,370...20,860,841 		JBrowse link
positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within IMP (PMID:15692051) MGI PMID:15692051 NCBI chr 8:89,373,943...89,415,103
Ensembl chr 8:89,373,943...89,415,102 		JBrowse link
positive regulation of cytokine production involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec7a C-type lectin domain family 7, member a involved_in IBA
IDA		 (PMID:27288407) GO_Central
UniProt		 PMID:27288407 GO_REF:0000033 NCBI chr 6:129,438,554...129,449,748
Ensembl chr 6:129,438,554...129,449,742 		JBrowse link
G Defb43 defensin beta 43 involved_in ISO (PMID:26649771) UniProt PMID:26649771 NCBI chr14:63,249,220...63,255,537
Ensembl chr14:63,249,220...63,255,537 		JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr13:95,648,226...95,661,748
Ensembl chr13:95,648,240...95,661,735 		JBrowse link
G Ffar2 free fatty acid receptor 2 involved_in IMP (PMID:23665276) UniProt PMID:23665276 NCBI chr 7:30,517,778...30,523,200
Ensembl chr 7:30,517,773...30,523,200 		JBrowse link
G Ffar3 free fatty acid receptor 3 involved_in IMP (PMID:23665276) UniProt PMID:23665276 NCBI chr 7:30,553,755...30,555,603
Ensembl chr 7:30,553,755...30,555,603 		JBrowse link
G Hk1 hexokinase 1 involved_in IDA (PMID:27374331) CAFA PMID:27374331 NCBI chr10:62,104,634...62,215,699
Ensembl chr10:62,104,634...62,215,687 		JBrowse link
G Htr2a 5-hydroxytryptamine (serotonin) receptor 2A involved_in ISO
IEA		 RGD
Ensembl
GO_Central		 PMID:19318092 GO_REF:0000096 GO_REF:0000107 RGD:401901206 NCBI chr14:74,878,314...74,944,299
Ensembl chr14:74,878,280...74,946,934 		JBrowse link
G Inava innate immunity activator involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr 1:136,141,259...136,162,045
Ensembl chr 1:136,141,269...136,162,002 		JBrowse link
G Irf5 interferon regulatory factor 5 involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 6:29,526,129...29,541,874
Ensembl chr 6:29,526,624...29,541,870 		JBrowse link
G Klrh1 killer cell lectin-like receptor subfamily H, member 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:129,743,531...129,761,233
Ensembl chr 6:129,743,531...129,761,233 		JBrowse link
G Lacc1 laccase domain containing 1 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr14:77,261,640...77,274,344
Ensembl chr14:77,261,640...77,274,344 		JBrowse link
G Laptm5 lysosomal-associated protein transmembrane 5 involved_in IMP (PMID:22733818) ARUK-UCL PMID:22733818 NCBI chr 4:130,640,627...130,663,459
Ensembl chr 4:130,640,436...130,663,452 		JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 involved_in IMP (PMID:27374331) CAFA PMID:27374331 NCBI chr11:59,432,395...59,457,781
Ensembl chr11:59,432,394...59,457,782 		JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr 8:89,373,943...89,415,103
Ensembl chr 8:89,373,943...89,415,102 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IMP (PMID:27288407) UniProt PMID:27288407 NCBI chr11:70,681,758...70,703,387
Ensembl chr11:70,681,758...70,703,412 		JBrowse link
G Sphk2 sphingosine kinase 2 involved_in IMP (PMID:17346996) UniProt PMID:17346996 NCBI chr 7:45,358,887...45,367,426
Ensembl chr 7:45,358,891...45,367,426 		JBrowse link
G Tek TEK receptor tyrosine kinase acts_upstream_of_or_within IDA (PMID:20060382) MGI PMID:20060382 NCBI chr 4:94,627,322...94,763,213
Ensembl chr 4:94,627,526...94,763,213 		JBrowse link
G Tnfrsf14 tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator) involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:21236258) GO_Central
MGI		 PMID:21236258 GO_REF:0000033 NCBI chr 4:155,002,944...155,013,077
Ensembl chr 4:155,006,390...155,013,020 		JBrowse link
G Trim6 tripartite motif-containing 6 involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 7:103,868,002...103,884,359
Ensembl chr 7:103,868,000...103,884,359 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A involved_in ISO GO_Central GO_REF:0000119 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
positive regulation of dendritic cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec7a C-type lectin domain family 7, member a involved_in IMP
IDA		 (PMID:19136564)
(PMID:27288407)		 ARUK-UCL
UniProt		 PMID:19136564 PMID:27288407 NCBI chr 6:129,438,554...129,449,748
Ensembl chr 6:129,438,554...129,449,742 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in IMP (PMID:18454155) UniProt PMID:18454155 NCBI chr 5:75,735,647...75,817,382
Ensembl chr 5:75,735,576...75,817,382 		JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO
IEA		 RGD
Ensembl
GO_Central		 PMID:16818757 GO_REF:0000096 GO_REF:0000107 RGD:1600784 NCBI chr 8:89,373,943...89,415,103
Ensembl chr 8:89,373,943...89,415,102 		JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in IMP (PMID:19136564) ARUK-UCL PMID:19136564 NCBI chr 8:118,225,014...118,361,881
Ensembl chr 8:118,225,030...118,361,881 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IMP (PMID:27288407) UniProt PMID:27288407 NCBI chr11:70,681,758...70,703,387
Ensembl chr11:70,681,758...70,703,412 		JBrowse link
positive regulation of granzyme A production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xcl1 chemokine (C motif) ligand 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 1:164,759,216...164,763,094
Ensembl chr 1:164,759,213...164,763,096 		JBrowse link
positive regulation of granzyme B production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd244a CD244 molecule A involved_in ISO GO_Central GO_REF:0000119 NCBI chr 1:171,386,761...171,412,884
Ensembl chr 1:171,386,761...171,437,314 		JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) involved_in IMP (PMID:23871208) UniProt PMID:23871208 NCBI chr 3:103,763,891...103,819,568
Ensembl chr 3:103,767,111...103,819,563 		JBrowse link
G Xcl1 chemokine (C motif) ligand 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 1:164,759,216...164,763,094
Ensembl chr 1:164,759,213...164,763,096 		JBrowse link
positive regulation of immunoglobulin production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton agammaglobulinemia tyrosine kinase involved_in ISO
IEA		 RGD
Ensembl
GO_Central		 PMID:28352114 GO_REF:0000096 GO_REF:0000107 RGD:151665126 NCBI chr  X:133,443,083...133,484,366
Ensembl chr  X:133,443,085...133,484,319 		JBrowse link
G Cd27 CD27 antigen involved_in NAS (PMID:9692890) UniProt PMID:9692890 NCBI chr 6:125,209,583...125,214,014
Ensembl chr 6:125,209,585...125,213,973 		JBrowse link
G Cd37 CD37 antigen acts_upstream_of_or_within IMP (PMID:10891477) MGI PMID:10891477 NCBI chr 7:44,883,056...44,888,701
Ensembl chr 7:44,883,056...44,888,539 		JBrowse link
G Cd86 CD86 antigen involved_in IDA (PMID:23241883) UniProt PMID:23241883 NCBI chr16:36,389,318...36,486,439
Ensembl chr16:36,424,231...36,486,443 		JBrowse link
G Clcf1 cardiotrophin-like cytokine factor 1 involved_in IDA (PMID:12023368) BHF-UCL PMID:12023368 NCBI chr19:4,264,479...4,273,548
Ensembl chr19:4,264,292...4,273,544 		JBrowse link
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 involved_in IMP (PMID:25222125) UniProt PMID:25222125 NCBI chr12:44,252,680...44,256,851
Ensembl chr12:44,252,342...44,257,109 		JBrowse link
G Ephb2 Eph receptor B2 involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 4:136,374,850...136,563,637
Ensembl chr 4:136,374,850...136,563,299 		JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within IMP (PMID:16819554) MGI PMID:16819554 NCBI chr 6:98,902,303...99,510,587
Ensembl chr 6:98,902,299...99,499,682 		JBrowse link
G Galnt2 polypeptide N-acetylgalactosaminyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:124,958,133...125,072,461
Ensembl chr 8:124,958,130...125,072,463 		JBrowse link
G Gpi1 glucose-6-phosphate isomerase 1 involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 7:33,900,752...33,929,761
Ensembl chr 7:33,900,755...33,929,761 		JBrowse link
G H2-T23 histocompatibility 2, T region locus 23 involved_in ISO GO_Central GO_REF:0000119 NCBI chr17:36,340,869...36,343,593
Ensembl chr17:36,340,665...36,343,747 		JBrowse link
G Hpx hemopexin acts_upstream_of_or_within IMP (PMID:18641331) MGI PMID:18641331 NCBI chr 7:105,240,818...105,249,323
Ensembl chr 7:105,240,820...105,249,344 		JBrowse link
G Il10 interleukin 10 involved_in
acts_upstream_of		 IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711 		JBrowse link
G Il13 interleukin 13 involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP
IGI		 IgE production after infection
(PMID:15944273)		 RGD
GO_Central
MGI		 PMID:11573960 PMID:15944273 GO_REF:0000033 GO_REF:0000096 RGD:633067 NCBI chr11:53,522,150...53,525,529
Ensembl chr11:53,522,151...53,525,529 		JBrowse link
G Il13ra1 interleukin 13 receptor, alpha 1 involved_in ISO
IBA		 IgE production after infection RGD
GO_Central		 PMID:11573960 GO_REF:0000033 RGD:633067 NCBI chr  X:35,375,761...35,434,915
Ensembl chr  X:35,375,763...35,434,912 		JBrowse link
G Il2 interleukin 2 acts_upstream_of_or_within IMP
ISO		 (PMID:1830926) MGI
GO_Central		 PMID:1830926 GO_REF:0000119 NCBI chr 3:37,174,862...37,180,103
Ensembl chr 3:37,174,672...37,180,108 		JBrowse link
G Il21 interleukin 21 involved_in IMP (PMID:23045607) UniProt PMID:23045607 NCBI chr 3:37,276,908...37,286,785
Ensembl chr 3:37,276,908...37,286,785 		JBrowse link
G Il2rg interleukin 2 receptor, gamma chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:100,307,991...100,311,861
Ensembl chr  X:100,307,984...100,311,861 		JBrowse link
G Il33 interleukin 33 involved_in IGI (PMID:18268038) BHF-UCL PMID:18268038 NCBI chr19:29,902,513...29,938,118
Ensembl chr19:29,902,514...29,938,118 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within IGI
IMP		 (PMID:15944273) MGI PMID:15944273 NCBI chr11:53,503,287...53,509,492
Ensembl chr11:53,493,809...53,509,496 		JBrowse link
G Il4ra interleukin 4 receptor, alpha acts_upstream_of_or_within IMP (PMID:15944273) MGI PMID:15944273 NCBI chr 7:125,151,443...125,178,646
Ensembl chr 7:125,151,292...125,178,646 		JBrowse link
G Il5 interleukin 5 involved_in IGI (PMID:18268038) BHF-UCL PMID:18268038 NCBI chr11:53,611,621...53,615,930
Ensembl chr11:53,611,621...53,615,933 		JBrowse link
G Il6 interleukin 6 involved_in IMP
ISO		 (PMID:23045607) UniProt
GO_Central		 PMID:23045607 GO_REF:0000119 NCBI chr 5:30,218,112...30,224,973
Ensembl chr 5:30,218,112...30,224,979 		JBrowse link
G Mzb1 marginal zone B and B1 cell-specific protein 1 involved_in IMP (PMID:19805154), (PMID:19805157) UniProt PMID:19805154 PMID:19805157 NCBI chr18:35,780,318...35,782,420
Ensembl chr18:35,780,320...35,782,420 		JBrowse link
G Phb1 prohibitin 1 involved_in IDA (PMID:23241883) UniProt PMID:23241883 NCBI chr11:95,557,783...95,571,599
Ensembl chr11:95,557,783...95,571,599 		JBrowse link
G Phb2 prohibitin 2 involved_in IDA (PMID:23241883) UniProt PMID:23241883 NCBI chr 6:124,689,252...124,693,908
Ensembl chr 6:124,689,299...124,693,913 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in ISO GO_Central GO_REF:0000119 NCBI chr 1:137,990,601...138,103,491
Ensembl chr 1:137,990,599...138,103,446 		JBrowse link
G Rbp4 retinol binding protein 4, plasma involved_in IDA (PMID:10944490) BHF-UCL PMID:10944490 NCBI chr19:38,105,068...38,113,769
Ensembl chr19:38,105,077...38,113,729 		JBrowse link
G Sash3 SAM and SH3 domain containing 3 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:16227612) MGI
GO_Central		 PMID:16227612 GO_REF:0000033 NCBI chr  X:47,235,313...47,250,442
Ensembl chr  X:47,235,313...47,250,442 		JBrowse link
G Stx4a syntaxin 4A (placental) involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 7:127,439,832...127,450,160
Ensembl chr 7:127,423,466...127,448,191 		JBrowse link
G Tlr9 toll-like receptor 9 involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr 9:106,099,797...106,104,075
Ensembl chr 9:106,099,797...106,104,082 		JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:23333565 RGD:7245573 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983 		JBrowse link
G Tnfrsf4 tumor necrosis factor receptor superfamily, member 4 involved_in IDA (PMID:7749983) BHF-UCL PMID:7749983 NCBI chr 4:156,098,049...156,101,070
Ensembl chr 4:156,098,300...156,101,069 		JBrowse link
G Tnfsf4 tumor necrosis factor (ligand) superfamily, member 4 involved_in IDA (PMID:7749983) BHF-UCL PMID:7749983 NCBI chr 1:161,223,009...161,245,777
Ensembl chr 1:161,222,980...161,245,981 		JBrowse link
G Vamp3 vesicle-associated membrane protein 3 NOT|involved_in ISO (PMID:24055037) UniProt PMID:24055037 NCBI chr 4:151,131,762...151,142,410
Ensembl chr 4:151,131,757...151,142,420 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in IDA
ISO
ISS		 (PMID:12612580) UniProt
GO_Central		 PMID:12612580 GO_REF:0000024 GO_REF:0000119 NCBI chr11:5,470,641...5,475,993
Ensembl chr11:5,470,659...5,475,893 		JBrowse link
positive regulation of immunoglobulin production in mucosal tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 6030468B19Rik RIKEN cDNA 6030468B19 gene involved_in IMP (PMID:28978694) UniProt PMID:28978694 NCBI chr11:117,688,460...117,698,134
Ensembl chr11:117,688,486...117,698,127 		JBrowse link
G Xcl1 chemokine (C motif) ligand 1 involved_in IDA (PMID:9973465) BHF-UCL PMID:9973465 NCBI chr 1:164,759,216...164,763,094
Ensembl chr 1:164,759,213...164,763,096 		JBrowse link
positive regulation of interleukin-4-dependent isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfsf4 tumor necrosis factor (ligand) superfamily, member 4 involved_in IMP (PMID:12496423) BHF-UCL PMID:12496423 NCBI chr 1:161,223,009...161,245,777
Ensembl chr 1:161,222,980...161,245,981 		JBrowse link
positive regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc3 exosome component 3 acts_upstream_of_or_within IMP (PMID:21255825) MGI PMID:21255825 NCBI chr 4:45,316,613...45,320,616
Ensembl chr 4:45,316,613...45,342,732 		JBrowse link
G Exosc6 exosome component 6 acts_upstream_of_or_within IMP (PMID:21255825) MGI PMID:21255825 NCBI chr 8:111,782,971...111,784,296
Ensembl chr 8:111,782,971...111,784,296 		JBrowse link
G Hmces 5-hydroxymethylcytosine (hmC) binding, ES cell specific involved_in IDA (PMID:31806351) UniProt PMID:31806351 NCBI chr 6:87,890,889...87,913,603
Ensembl chr 6:87,890,917...87,913,611 		JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in IMP (PMID:28114273) UniProt PMID:28114273 NCBI chr19:3,816,436...3,868,303
Ensembl chr19:3,817,421...3,868,303 		JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in IMP (PMID:28114273) UniProt PMID:28114273 NCBI chr 7:4,743,091...4,750,513
Ensembl chr 7:4,743,114...4,750,513 		JBrowse link
G Mad2l2 MAD2 mitotic arrest deficient-like 2 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 4:148,214,615...148,230,161
Ensembl chr 4:148,214,841...148,230,156 		JBrowse link
G Paxip1 PAX interacting (with transcription-activation domain) protein 1 involved_in IMP (PMID:20671152) UniProt PMID:20671152 NCBI chr 5:27,947,044...27,999,326
Ensembl chr 5:27,945,078...27,996,689 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in IMP (PMID:23306439), (PMID:23333305), (PMID:23333306) UniProt PMID:23306439 PMID:23333305 PMID:23333306 NCBI chr 2:51,962,725...52,016,781
Ensembl chr 2:51,962,844...52,012,395 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in IBA
IEA
ISO		 GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr 2:132,528,871...132,592,975
Ensembl chr 2:132,528,851...132,592,975 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr14:33,958,905...34,032,528
Ensembl chr14:33,958,990...34,032,450 		JBrowse link
G Shld3 shieldin complex subunit 3 involved_in IBA
ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr13:104,310,228...104,314,967
Ensembl chr13:104,310,230...104,314,947 		JBrowse link
G Tfrc transferrin receptor involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr16:32,427,714...32,451,612
Ensembl chr16:32,427,738...32,451,612 		JBrowse link
G Trp53bp1 transformation related protein 53 binding protein 1 involved_in IMP
ISO		 (PMID:15077110), (PMID:15159415) UniProt
GO_Central		 PMID:15077110 PMID:15159415 GO_REF:0000119 NCBI chr 2:121,025,316...121,126,830
Ensembl chr 2:121,023,762...121,101,888 		JBrowse link
positive regulation of isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 involved_in IMP (PMID:10430621) CAFA PMID:10430621 NCBI chr 9:111,057,296...111,100,854
Ensembl chr 9:111,057,296...111,100,859 		JBrowse link
G Msh2 mutS homolog 2 involved_in IMP (PMID:10430621) CAFA PMID:10430621 NCBI chr17:87,979,960...88,031,141
Ensembl chr17:87,979,758...88,031,141 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within IMP (PMID:23241889) MGI PMID:23241889 NCBI chr 5:33,974,286...34,055,310
Ensembl chr 5:33,978,069...34,055,319 		JBrowse link
G Pms2 PMS1 homolog2, mismatch repair system component involved_in IMP
IGI		 (PMID:10430621) CAFA PMID:10430621 NCBI chr 5:143,846,379...143,922,538
Ensembl chr 5:143,846,782...143,870,786
Ensembl chr 5:143,846,782...143,870,786 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within
involved_in		 ISO
ISS		 (PMID:14988498) MGI
AgBase		 PMID:14988498 GO_REF:0000024 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Tnfsf13 tumor necrosis factor (ligand) superfamily, member 13 acts_upstream_of_or_within
involved_in		 IMP
IBA
ISO		 (PMID:14988498) MGI
GO_Central		 PMID:14988498 GO_REF:0000033 NCBI chr11:69,573,403...69,576,380
Ensembl chr11:69,573,672...69,576,610 		JBrowse link
positive regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clcf1 cardiotrophin-like cytokine factor 1 involved_in IDA (PMID:12023368) BHF-UCL PMID:12023368 NCBI chr19:4,264,479...4,273,548
Ensembl chr19:4,264,292...4,273,544 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within IDA (PMID:14988498) MGI PMID:14988498 NCBI chr11:53,503,287...53,509,492
Ensembl chr11:53,493,809...53,509,496 		JBrowse link
G Stat6 signal transducer and activator of transcription 6 acts_upstream_of_or_within IGI (PMID:10490661) MGI PMID:10490661 NCBI chr10:127,478,855...127,496,856
Ensembl chr10:127,478,855...127,496,826 		JBrowse link
positive regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad5 ATPase family, AAA domain containing 5 acts_upstream_of_or_within IMP (PMID:25404367) MGI PMID:25404367 NCBI chr11:79,980,205...80,026,623
Ensembl chr11:79,980,226...80,026,620 		JBrowse link
G Cd28 CD28 antigen acts_upstream_of_or_within IMP (PMID:7688139) MGI PMID:7688139 NCBI chr 1:60,785,547...60,812,521
Ensembl chr 1:60,755,959...60,812,518 		JBrowse link
G Cd40 CD40 antigen acts_upstream_of_or_within IDA (PMID:12882831) MGI PMID:12882831 NCBI chr 2:164,897,535...164,913,574
Ensembl chr 2:164,897,547...164,914,868 		JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within IDA (PMID:12882831) MGI PMID:12882831 NCBI chr10:118,276,951...118,281,799
Ensembl chr10:118,276,951...118,281,797 		JBrowse link
G Il2 interleukin 2 acts_upstream_of_or_within IMP (PMID:1830926) MGI PMID:1830926 NCBI chr 3:37,174,862...37,180,103
Ensembl chr 3:37,174,672...37,180,108 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within IDA (PMID:12882831), (PMID:14988498) MGI PMID:12882831 PMID:14988498 NCBI chr11:53,503,287...53,509,492
Ensembl chr11:53,493,809...53,509,496 		JBrowse link
G Mlh1 mutL homolog 1 involved_in IMP (PMID:10430621) CAFA PMID:10430621 NCBI chr 9:111,057,296...111,100,854
Ensembl chr 9:111,057,296...111,100,859 		JBrowse link
G Msh2 mutS homolog 2 involved_in IMP (PMID:10430621) CAFA PMID:10430621 NCBI chr17:87,979,960...88,031,141
Ensembl chr17:87,979,758...88,031,141 		JBrowse link
G Pagr1a PAXIP1 associated glutamate rich protein 1A involved_in IMP (PMID:26744420) UniProt PMID:26744420 NCBI chr 7:126,614,223...126,616,524
Ensembl chr 7:126,614,205...126,616,524
Ensembl chr 7:126,614,205...126,616,524 		JBrowse link
G Paxip1 PAX interacting (with transcription-activation domain) protein 1 involved_in IMP (PMID:26744420) UniProt PMID:26744420 NCBI chr 5:27,947,044...27,999,326
Ensembl chr 5:27,945,078...27,996,689 		JBrowse link
G Pms2 PMS1 homolog2, mismatch repair system component involved_in IGI
IMP		 (PMID:10430621) CAFA PMID:10430621 NCBI chr 5:143,846,379...143,922,538
Ensembl chr 5:143,846,782...143,870,786
Ensembl chr 5:143,846,782...143,870,786 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within IMP (PMID:9015183) MGI PMID:9015183 NCBI chr 1:137,990,601...138,103,491
Ensembl chr 1:137,990,599...138,103,446 		JBrowse link
G Tbx21 T-box 21 acts_upstream_of_or_within IMP (PMID:12882831) MGI PMID:12882831 NCBI chr11:96,988,833...97,006,157
Ensembl chr11:96,988,897...97,006,157 		JBrowse link
positive regulation of macrophage cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Card9 caspase recruitment domain family, member 9 acts_upstream_of_or_within IMP (PMID:17187069) MGI PMID:17187069 NCBI chr 2:26,242,199...26,250,957
Ensembl chr 2:26,242,188...26,250,930 		JBrowse link
G Casp1 caspase 1 acts_upstream_of_or_within IMP (PMID:18490713) MGI PMID:18490713 NCBI chr 9:5,298,517...5,307,281
Ensembl chr 9:5,298,508...5,307,290 		JBrowse link
G Casp4 caspase 4, apoptosis-related cysteine peptidase acts_upstream_of_or_within IGI (PMID:22002608) MGI PMID:22002608 NCBI chr 9:5,308,816...5,336,791
Ensembl chr 9:5,308,828...5,336,783 		JBrowse link
G Cd36 CD36 molecule acts_upstream_of_or_within IMP (PMID:15690042)
(PMID:16061696)		 MGI PMID:15690042 PMID:16061696 NCBI chr 5:17,986,680...18,093,828
Ensembl chr 5:17,986,688...18,093,799 		JBrowse link
G Cd74 CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated) involved_in IBA
IDA		 (PMID:19413900) GO_Central
BHF-UCL		 PMID:19413900 GO_REF:0000033 NCBI chr18:60,936,921...60,945,724
Ensembl chr18:60,936,920...60,945,724 		JBrowse link
G Gprc5b G protein-coupled receptor, family C, group 5, member B involved_in IMP (PMID:23169819) UniProt PMID:23169819 NCBI chr 7:118,571,263...118,594,434
Ensembl chr 7:118,571,270...118,594,434 		JBrowse link
G H2-M3 histocompatibility 2, M region locus 3 involved_in ISO GO_Central GO_REF:0000119 NCBI chr17:37,581,094...37,585,380
Ensembl chr17:37,581,111...37,585,375 		JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within IDA (PMID:9348310) MGI PMID:9348310 NCBI chr10:118,276,951...118,281,799
Ensembl chr10:118,276,951...118,281,797 		JBrowse link
G Laptm5 lysosomal-associated protein transmembrane 5 involved_in IMP (PMID:22733818) ARUK-UCL PMID:22733818 NCBI chr 4:130,640,627...130,663,459
Ensembl chr 4:130,640,436...130,663,452 		JBrowse link
G Mapkapk2 MAP kinase-activated protein kinase 2 acts_upstream_of_or_within IMP (PMID:24020373) MGI PMID:24020373 NCBI chr 1:130,981,437...131,025,580
Ensembl chr 1:130,981,437...131,025,563 		JBrowse link
G Mir324 microRNA 324 acts_upstream_of_or_within IDA (PMID:24882011) MGI PMID:24882011 NCBI chr11:69,902,869...69,902,957
Ensembl chr11:69,902,869...69,902,957 		JBrowse link
G Myd88 myeloid differentiation primary response gene 88 acts_upstream_of_or_within IGI
IMP		 (PMID:12872135)
(PMID:10607756), (PMID:11067888), (PMID:12872135)		 MGI PMID:10607756 PMID:11067888 PMID:12872135 NCBI chr 9:119,165,000...119,169,084
Ensembl chr 9:119,165,000...119,170,477 		JBrowse link
G Nod1 nucleotide-binding oligomerization domain containing 1 acts_upstream_of_or_within IMP
IGI		 (PMID:18261938) MGI PMID:18261938 NCBI chr 6:54,900,927...54,949,655
Ensembl chr 6:54,900,934...54,949,597 		JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within IMP
IDA
IGI		 (PMID:14560001), (PMID:15220916)
(PMID:15220916), (PMID:18261938)
(PMID:15692051), (PMID:18261938)
(PMID:18261938)		 MGI PMID:14560001 PMID:15220916 PMID:15692051 PMID:18261938 NCBI chr 8:89,373,943...89,415,103
Ensembl chr 8:89,373,943...89,415,102 		JBrowse link
G P2rx7 purinergic receptor P2X, ligand-gated ion channel, 7 acts_upstream_of_or_within IMP (PMID:11016935)
(PMID:18490713)		 MGI PMID:11016935 PMID:18490713 NCBI chr 5:122,781,990...122,830,399
Ensembl chr 5:122,781,974...122,829,495 		JBrowse link
G Panx1 pannexin 1 acts_upstream_of_or_within IMP (PMID:18490713) MGI PMID:18490713 NCBI chr 9:14,917,081...14,956,774
Ensembl chr 9:14,913,424...14,956,774 		JBrowse link
G Plcg2 phospholipase C, gamma 2 acts_upstream_of IMP (PMID:22041900) ARUK-UCL PMID:22041900 NCBI chr 8:118,225,014...118,361,881
Ensembl chr 8:118,225,030...118,361,881 		JBrowse link
G Psg22 pregnancy-specific beta-1-glycoprotein 22 acts_upstream_of_or_within IDA (PMID:22423048) MGI PMID:22423048 NCBI chr 7:18,451,976...18,461,363
Ensembl chr 7:18,452,015...18,461,173 		JBrowse link
G Pycard PYD and CARD domain containing acts_upstream_of_or_within IGI (PMID:22002608) MGI PMID:22002608 NCBI chr 7:127,590,545...127,593,039
Ensembl chr 7:127,588,880...127,593,039 		JBrowse link
G Ripk2 receptor (TNFRSF)-interacting serine-threonine kinase 2 acts_upstream_of_or_within IMP (PMID:11894098), (PMID:18261938) MGI PMID:11894098 PMID:18261938 NCBI chr 4:16,122,740...16,163,674
Ensembl chr 4:16,122,733...16,163,647 		JBrowse link
G Rtn4 reticulon 4 involved_in IMP (PMID:19805174) UniProt PMID:19805174 NCBI chr11:29,642,898...29,694,414
Ensembl chr11:29,642,947...29,694,331 		JBrowse link
G Sema7a sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A involved_in IDA (PMID:17377534) UniProt PMID:17377534 NCBI chr 9:57,846,879...57,870,148
Ensembl chr 9:57,847,395...57,870,148 		JBrowse link
G Sirt1 sirtuin 1 involved_in IMP (PMID:22315447) UniProt PMID:22315447 NCBI chr10:63,154,784...63,174,814
Ensembl chr10:63,154,784...63,217,483 		JBrowse link
G Spon2 spondin 2, extracellular matrix protein acts_upstream_of_or_within IMP
IDA		 (PMID:14691481) MGI PMID:14691481 NCBI chr 5:33,370,862...33,375,596
Ensembl chr 5:33,355,528...33,375,799 		JBrowse link
G Ticam1 TIR domain containing adaptor molecule 1 acts_upstream_of_or_within IDA
IGI
IMP		 (PMID:12872135)
(PMID:12855817)		 MGI PMID:12855817 PMID:12872135 NCBI chr17:56,576,462...56,583,767
Ensembl chr17:56,576,319...56,583,786 		JBrowse link
G Tirap toll-interleukin 1 receptor (TIR) domain-containing adaptor protein acts_upstream_of_or_within IMP (PMID:15690042) MGI PMID:15690042 NCBI chr 9:35,095,687...35,111,587
Ensembl chr 9:35,095,847...35,111,587 		JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within IDA
IMP		 (PMID:18261938)
(PMID:10549626), (PMID:11067888)
(PMID:15690042)		 MGI PMID:10549626 PMID:11067888 PMID:15690042 PMID:18261938 NCBI chr 3:83,743,579...83,749,045
Ensembl chr 3:83,743,579...83,749,074 		JBrowse link
G Tlr3 toll-like receptor 3 acts_upstream_of_or_within IDA
IMP		 (PMID:18261938)
(PMID:12855817)		 MGI PMID:12855817 PMID:18261938 NCBI chr 8:45,848,702...45,864,112
Ensembl chr 8:45,848,702...45,864,117 		JBrowse link
G Tlr4 toll-like receptor 4 acts_upstream_of_or_within IMP
IDA		 (PMID:14691481)
(PMID:10623794)
(PMID:18261938), (PMID:21609717)
(PMID:10549626), (PMID:10607756), (PMID:15661922)		 MGI PMID:10549626 PMID:10607756 PMID:10623794 PMID:14691481 PMID:15661922 More... NCBI chr 4:66,745,788...66,765,338
Ensembl chr 4:66,745,821...66,848,521 		JBrowse link
G Tlr7 toll-like receptor 7 acts_upstream_of_or_within IDA (PMID:18261938) MGI PMID:18261938 NCBI chr  X:166,086,376...166,113,570
Ensembl chr  X:166,087,925...166,113,554 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
positive regulation of mast cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcer1a Fc receptor, IgE, high affinity I, alpha polypeptide acts_upstream_of_or_within IDA (PMID:9000133) MGI PMID:9000133 NCBI chr 1:173,048,836...173,054,799
Ensembl chr 1:173,048,851...173,054,781 		JBrowse link
G Fcer1g Fc receptor, IgE, high affinity I, gamma polypeptide acts_upstream_of_or_within IMP
IDA		 (PMID:14764707) MGI PMID:14764707 NCBI chr 1:171,057,141...171,061,918
Ensembl chr 1:171,057,141...171,061,934 		JBrowse link
G Igh-7 immunoglobulin heavy chain 7 (heavy chain of IgE) acts_upstream_of_or_within IDA (PMID:14764707), (PMID:9000133) MGI PMID:9000133 PMID:14764707
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr 5:75,735,647...75,817,382
Ensembl chr 5:75,735,576...75,817,382 		JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 involved_in IMP (PMID:24586680) UniProt PMID:24586680 NCBI chr 4:48,045,098...48,086,446
Ensembl chr 4:48,045,153...48,086,447 		JBrowse link
G Syk spleen tyrosine kinase acts_upstream_of_or_within IMP (PMID:9000133) MGI PMID:9000133 NCBI chr13:52,736,670...52,802,828
Ensembl chr13:52,737,209...52,802,828 		JBrowse link
positive regulation of myeloid dendritic cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk4 calcium/calmodulin-dependent protein kinase IV NOT|involved_in ISO (PMID:17909078) UniProt PMID:17909078 NCBI chr18:33,067,995...33,328,820
Ensembl chr18:33,067,984...33,324,281 		JBrowse link
G Ddx1 DEAD box helicase 1 involved_in IMP (PMID:21703541) UniProt PMID:21703541 NCBI chr12:13,269,308...13,299,175
Ensembl chr12:13,266,974...13,299,214 		JBrowse link
G Ddx21 DExD box helicase 21 involved_in IMP (PMID:21703541) UniProt PMID:21703541 NCBI chr10:62,416,026...62,438,077
Ensembl chr10:62,416,030...62,438,060 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in IMP (PMID:21703541) UniProt PMID:21703541 NCBI chr 3:62,375,436...62,414,464
Ensembl chr 3:62,375,434...62,414,425 		JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in IMP (PMID:21703541) UniProt PMID:21703541 NCBI chr 2:131,075,445...131,089,945
Ensembl chr 2:131,075,983...131,089,945 		JBrowse link
G Rigi RNA sensor RIG-I involved_in IMP (PMID:21703541) UniProt PMID:21703541 NCBI chr 4:40,203,775...40,239,843
Ensembl chr 4:40,203,773...40,239,828 		JBrowse link
G Ticam1 TIR domain containing adaptor molecule 1 involved_in IMP (PMID:21703541) UniProt PMID:21703541 NCBI chr17:56,576,462...56,583,767
Ensembl chr17:56,576,319...56,583,786 		JBrowse link
positive regulation of myeloid leukocyte cytokine production involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mif macrophage migration inhibitory factor (glycosylation-inhibiting factor) involved_in IMP (PMID:11756671) BHF-UCL PMID:11756671 NCBI chr10:75,695,187...75,696,111
Ensembl chr10:75,695,187...75,696,074 		JBrowse link
positive regulation of natural killer cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd160 CD160 antigen involved_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr 3:96,706,079...96,736,667
Ensembl chr 3:96,706,079...96,736,667 		JBrowse link
G Cd226 CD226 antigen acts_upstream_of_or_within IMP (PMID:24658051) MGI PMID:24658051 NCBI chr18:89,195,078...89,290,356
Ensembl chr18:89,195,091...89,290,353 		JBrowse link
G Clnk cytokine-dependent hematopoietic cell linker involved_in IMP (PMID:16439675) UniProt PMID:16439675 NCBI chr 5:38,858,951...39,034,201
Ensembl chr 5:38,863,805...39,034,155 		JBrowse link
G Gimap3 GTPase, IMAP family member 3 involved_in ISO GO_Central GO_REF:0000096 NCBI chr 6:48,741,398...48,747,785
Ensembl chr 6:48,741,398...48,747,785 		JBrowse link
G Gimap5 GTPase, IMAP family member 5 involved_in ISO RGD
GO_Central		 PMID:15100275 GO_REF:0000096 RGD:2303778 NCBI chr 6:48,723,131...48,731,134
Ensembl chr 6:48,723,131...48,731,144 		JBrowse link
G Gm7030 predicted gene 7030 involved_in ISO (PMID:27455421) UniProt PMID:27455421 NCBI chr17:36,438,501...36,440,317
Ensembl chr17:36,420,611...36,440,317 		JBrowse link
G H2-M3 histocompatibility 2, M region locus 3 involved_in ISO GO_Central GO_REF:0000119 NCBI chr17:37,581,094...37,585,380
Ensembl chr17:37,581,111...37,585,375 		JBrowse link
G H2-T23 histocompatibility 2, T region locus 23 involved_in ISO GO_Central GO_REF:0000119 NCBI chr17:36,340,869...36,343,593
Ensembl chr17:36,340,665...36,343,747 		JBrowse link
G Il21 interleukin 21 acts_upstream_of_or_within IDA (PMID:14764669) MGI PMID:14764669 NCBI chr 3:37,276,908...37,286,785
Ensembl chr 3:37,276,908...37,286,785 		JBrowse link
positive regulation of T cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 2:121,978,168...121,983,563
Ensembl chr 2:121,978,167...121,983,564 		JBrowse link
G Cd55 CD55 molecule, decay accelerating factor for complement involved_in ISO GO_Central GO_REF:0000119 NCBI chr 1:130,357,526...130,390,513
Ensembl chr 1:130,366,764...130,390,481 		JBrowse link
G Cd55b CD55 molecule, decay accelerating factor for complement B involved_in ISO GO_Central GO_REF:0000119 NCBI chr 1:130,316,263...130,350,831
Ensembl chr 1:130,316,274...130,350,746 		JBrowse link
G Cd7 CD7 antigen involved_in ISO (PMID:10652336) UniProt PMID:10652336 NCBI chr11:120,927,573...120,930,304
Ensembl chr11:120,927,573...120,930,244 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 1:64,769,717...64,776,907
Ensembl chr 1:64,769,717...64,776,910 		JBrowse link
G H2-Q1 histocompatibility 2, Q region locus 1 involved_in ISO (PMID:24643698) BHF-UCL PMID:24643698 NCBI chr17:35,539,503...35,547,118
Ensembl chr17:35,539,381...35,544,075 		JBrowse link
G Malt1 MALT1 paracaspase involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr18:65,564,010...65,612,138
Ensembl chr18:65,564,009...65,612,138 		JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 4:31,963,659...32,023,470
Ensembl chr 4:31,964,097...32,023,467 		JBrowse link
G Sash3 SAM and SH3 domain containing 3 acts_upstream_of_or_within IMP (PMID:16227612) MGI PMID:16227612 NCBI chr  X:47,235,313...47,250,442
Ensembl chr  X:47,235,313...47,250,442 		JBrowse link
G Sectm1a secreted and transmembrane 1A involved_in ISO (PMID:22184754) UniProt PMID:22184754 NCBI chr11:120,958,221...120,988,023
Ensembl chr11:120,958,233...120,972,046 		JBrowse link
G Tnfsf4 tumor necrosis factor (ligand) superfamily, member 4 involved_in IDA (PMID:18354165), (PMID:9670042) BHF-UCL PMID:9670042 PMID:18354165 NCBI chr 1:161,223,009...161,245,777
Ensembl chr 1:161,222,980...161,245,981 		JBrowse link
G Traf2 TNF receptor-associated factor 2 involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 2:25,407,994...25,436,952
Ensembl chr 2:25,407,994...25,436,952 		JBrowse link
G Traf6 TNF receptor-associated factor 6 involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 2:101,508,765...101,532,013
Ensembl chr 2:101,508,774...101,532,014 		JBrowse link
G Xcl1 chemokine (C motif) ligand 1 involved_in IDA (PMID:9029087) BHF-UCL PMID:9029087 NCBI chr 1:164,759,216...164,763,094
Ensembl chr 1:164,759,213...164,763,096 		JBrowse link
positive regulation of T-helper 1 cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5a AT-rich interaction domain 5A involved_in IMP (PMID:27671645) UniProt PMID:27671645 NCBI chr 1:36,346,814...36,363,117
Ensembl chr 1:36,346,814...36,363,110 		JBrowse link
G Il18 interleukin 18 involved_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr 9:50,466,000...50,493,141
Ensembl chr 9:50,466,127...50,493,140 		JBrowse link
G Il18r1 interleukin 18 receptor 1 involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr 1:40,504,712...40,540,014
Ensembl chr 1:40,504,712...40,540,014 		JBrowse link
G Il1b interleukin 1 beta involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr 2:129,206,490...129,213,059
Ensembl chr 2:129,206,490...129,213,059 		JBrowse link
G Il1r1 interleukin 1 receptor, type I involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr 1:40,261,651...40,355,361
Ensembl chr 1:40,264,240...40,356,417 		JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in IDA (PMID:9126961) UniProt PMID:9126961 NCBI chr 1:171,594,700...171,628,752
Ensembl chr 1:171,594,695...171,628,752 		JBrowse link
G Tbx21 T-box 21 involved_in IDA (PMID:10761931) UniProt PMID:10761931 NCBI chr11:96,988,833...97,006,157
Ensembl chr11:96,988,897...97,006,157 		JBrowse link
G Xcl1 chemokine (C motif) ligand 1 involved_in IDA (PMID:9973465) BHF-UCL PMID:9973465 NCBI chr 1:164,759,216...164,763,094
Ensembl chr 1:164,759,213...164,763,096 		JBrowse link
positive regulation of T-helper 2 cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 CD81 antigen involved_in ISO
IMP
ISS		 (PMID:11046035) GO_Central
UniProt		 PMID:11046035 GO_REF:0000024 GO_REF:0000119 NCBI chr 7:142,606,487...142,621,667
Ensembl chr 7:142,606,476...142,621,671 		JBrowse link
G Dennd1b DENN domain containing 1B involved_in IMP
ISO		 (PMID:26774822) UniProt
GO_Central		 PMID:26774822 GO_REF:0000119 NCBI chr 1:138,891,447...139,103,781
Ensembl chr 1:138,891,173...139,106,698 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within IMP (PMID:15087456) MGI PMID:15087456 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
G Il4 interleukin 4 involved_in ISO GO_Central GO_REF:0000119 NCBI chr11:53,503,287...53,509,492
Ensembl chr11:53,493,809...53,509,496 		JBrowse link
G Il6 interleukin 6 involved_in IMP (PMID:11159963) BHF-UCL PMID:11159963 NCBI chr 5:30,218,112...30,224,973
Ensembl chr 5:30,218,112...30,224,979 		JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 involved_in IMP (PMID:26098997) UniProt PMID:26098997 NCBI chr11:59,432,395...59,457,781
Ensembl chr11:59,432,394...59,457,782 		JBrowse link
G Prkcz protein kinase C, zeta involved_in IMP (PMID:15987782) UniProt PMID:15987782 NCBI chr 4:155,344,579...155,445,856
Ensembl chr 4:155,344,586...155,445,818 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in IMP (PMID:19047684) UniProt PMID:19047684 NCBI chr12:26,492,742...26,506,451
Ensembl chr12:26,492,745...26,506,451 		JBrowse link
G Xcl1 chemokine (C motif) ligand 1 involved_in IDA (PMID:9973465) BHF-UCL PMID:9973465 NCBI chr 1:164,759,216...164,763,094
Ensembl chr 1:164,759,213...164,763,096 		JBrowse link
regulation of antibacterial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Evpl envoplakin acts_upstream_of_or_within IGI (PMID:27427436) MGI PMID:27427436 NCBI chr11:116,111,385...116,128,983
Ensembl chr11:116,111,385...116,128,903 		JBrowse link
G Ivl involucrin acts_upstream_of_or_within IGI (PMID:27427436) MGI PMID:27427436 NCBI chr 3:92,478,206...92,481,097
Ensembl chr 3:92,478,209...92,481,042 		JBrowse link
G Ppl periplakin acts_upstream_of_or_within IGI (PMID:27427436) MGI PMID:27427436 NCBI chr16:4,904,155...4,950,345
Ensembl chr16:4,904,155...4,950,285 		JBrowse link
regulation of cytokine production involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 acts_upstream_of_or_within IMP (PMID:22710871) MGI PMID:22710871 NCBI chr10:44,144,325...44,240,295
Ensembl chr10:44,144,354...44,240,287 		JBrowse link
G Pkp3 plakophilin 3 involved_in IMP (PMID:26173741) UniProt PMID:26173741 NCBI chr 7:140,658,202...140,670,424
Ensembl chr 7:140,658,131...140,670,423 		JBrowse link
G Tnfrsf1b tumor necrosis factor receptor superfamily, member 1b involved_in IGI (PMID:28052249) ARUK-UCL PMID:28052249 NCBI chr 4:144,938,938...144,973,453
Ensembl chr 4:144,940,033...144,973,440 		JBrowse link
G Tril TLR4 interactor with leucine-rich repeats involved_in IBA
ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr 6:53,792,453...53,797,810
Ensembl chr 6:53,792,453...53,797,815 		JBrowse link
regulation of dendritic cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within IDA (PMID:19047410) MGI PMID:19047410 NCBI chr 3:83,743,579...83,749,045
Ensembl chr 3:83,743,579...83,749,074 		JBrowse link
G Tlr3 toll-like receptor 3 acts_upstream_of_or_within IDA (PMID:19047410) MGI PMID:19047410 NCBI chr 8:45,848,702...45,864,112
Ensembl chr 8:45,848,702...45,864,117 		JBrowse link
G Tlr4 toll-like receptor 4 acts_upstream_of_or_within IDA (PMID:19047410) MGI PMID:19047410 NCBI chr 4:66,745,788...66,765,338
Ensembl chr 4:66,745,821...66,848,521 		JBrowse link
G Tlr9 toll-like receptor 9 acts_upstream_of_or_within IDA (PMID:19047410) MGI PMID:19047410 NCBI chr 9:106,099,797...106,104,075
Ensembl chr 9:106,099,797...106,104,082 		JBrowse link
regulation of immunoglobulin production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd40 CD40 antigen acts_upstream_of_or_within IDA (PMID:12958312) MGI PMID:12958312 NCBI chr 2:164,897,535...164,913,574
Ensembl chr 2:164,897,547...164,914,868 		JBrowse link
G Cd40lg CD40 ligand acts_upstream_of_or_within IDA (PMID:12958312) MGI PMID:12958312 NCBI chr  X:56,257,448...56,269,402
Ensembl chr  X:56,257,503...56,269,402 		JBrowse link
G Cgas cyclic GMP-AMP synthase acts_upstream_of_or_within IGI (PMID:26371324) MGI PMID:26371324 NCBI chr 9:78,337,800...78,350,519
Ensembl chr 9:78,337,808...78,350,519 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within IMP (PMID:16275384) MGI PMID:16275384 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484 		JBrowse link
G Ighm immunoglobulin heavy constant mu acts_upstream_of_or_within IMP (PMID:9707605) MGI PMID:9707605 NCBI chr12:113,382,446...113,386,350
Ensembl chr12:113,382,178...113,386,350 		JBrowse link
G Pkn1 protein kinase N1 acts_upstream_of_or_within IMP (PMID:23223530) MGI PMID:23223530 NCBI chr 8:84,393,162...84,425,819
Ensembl chr 8:84,393,165...84,425,808 		JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within IDA (PMID:12958312) MGI PMID:12958312 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983 		JBrowse link
G Tnfaip3 tumor necrosis factor, alpha-induced protein 3 involved_in IC (PMID:21088135) BHF-UCL PMID:21088135 NCBI chr10:18,876,658...18,891,158
Ensembl chr10:18,876,658...18,891,405 		JBrowse link
G Traf2 TNF receptor-associated factor 2 acts_upstream_of_or_within IMP (PMID:12958312) MGI PMID:12958312 NCBI chr 2:25,407,994...25,436,952
Ensembl chr 2:25,407,994...25,436,952 		JBrowse link
G Traf6 TNF receptor-associated factor 6 acts_upstream_of_or_within IDA (PMID:12958312) MGI PMID:12958312 NCBI chr 2:101,508,765...101,532,013
Ensembl chr 2:101,508,774...101,532,014 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within IGI
IMP		 (PMID:26371324)
(PMID:26320659)		 MGI PMID:26320659 PMID:26371324 NCBI chr 9:108,887,000...108,888,791
Ensembl chr 9:108,887,001...108,888,802 		JBrowse link
regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplf aprataxin and PNKP like factor acts_upstream_of_or_within IMP (PMID:21211721) MGI PMID:21211721 NCBI chr 6:87,605,407...87,649,244
Ensembl chr 6:87,605,406...87,649,175 		JBrowse link
G Mir181b-1 microRNA 181b-1 acts_upstream_of_or_within IDA (PMID:18762567) MGI PMID:18762567 NCBI chr 1:137,894,377...137,894,456
Ensembl chr 1:137,894,377...137,894,456 		JBrowse link
G Mir181b-2 microRNA 181b-2 acts_upstream_of_or_within IDA (PMID:18762567) MGI PMID:18762567 NCBI chr 2:38,743,842...38,743,930
Ensembl chr 2:38,743,842...38,743,930 		JBrowse link
G Supt6 SPT6, histone chaperone and transcription elongation factor involved_in IMP (PMID:21518874) UniProt PMID:21518874 NCBI chr11:78,097,575...78,136,798
Ensembl chr11:78,097,572...78,136,813 		JBrowse link
regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 acts_upstream_of_or_within IMP (PMID:16275384) MGI PMID:16275384 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484 		JBrowse link
G Il27ra interleukin 27 receptor, alpha acts_upstream_of_or_within IMP (PMID:11057672) MGI PMID:11057672 NCBI chr 8:84,756,915...84,769,250
Ensembl chr 8:84,756,923...84,769,218 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within IMP (PMID:17137798) MGI PMID:17137798 NCBI chr18:38,551,960...38,598,250
Ensembl chr18:38,543,449...38,598,356 		JBrowse link
G Slc15a4 solute carrier family 15, member 4 involved_in IMP (PMID:25310967) UniProt PMID:25310967 NCBI chr 5:127,668,795...127,710,356
Ensembl chr 5:127,672,728...127,709,961 		JBrowse link
regulation of macrophage cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Litaf LPS-induced TN factor acts_upstream_of_or_within IMP (PMID:16954198) MGI PMID:16954198 NCBI chr16:10,777,137...10,810,985
Ensembl chr16:10,777,139...10,884,021 		JBrowse link
G Ube2j1 ubiquitin-conjugating enzyme E2J 1 acts_upstream_of_or_within IGI (PMID:24020373) MGI PMID:24020373 NCBI chr 4:33,031,380...33,052,367
Ensembl chr 4:33,031,416...33,052,363 		JBrowse link
regulation of natural killer cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calhm6 calcium homeostasis modulator family member 6 involved_in IMP (PMID:36861806) UniProt PMID:36861806 NCBI chr10:34,002,063...34,003,968
Ensembl chr10:34,002,063...34,003,980 		JBrowse link
regulation of T cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl20 C-C motif chemokine ligand 20 NOT|involved_in IDA (PMID:19050256) UniProt PMID:19050256 NCBI chr 1:83,094,487...83,096,888
Ensembl chr 1:83,094,487...83,096,888 		JBrowse link
G Ccr2 C-C motif chemokine receptor 2 involved_in IMP (PMID:28507030) UniProt PMID:28507030 NCBI chr 9:123,901,954...123,913,594
Ensembl chr 9:123,901,987...123,913,594 		JBrowse link
G Tnfrsf1b tumor necrosis factor receptor superfamily, member 1b involved_in IBA
IMP		 (PMID:28052249) GO_Central
ARUK-UCL		 PMID:28052249 GO_REF:0000033 NCBI chr 4:144,938,938...144,973,453
Ensembl chr 4:144,940,033...144,973,440 		JBrowse link
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr 7:44,952,579...44,983,495
Ensembl chr 7:44,952,056...44,983,204 		JBrowse link
somatic diversification of immunoglobulins term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase involved_in ISO GO_Central GO_REF:0000119 NCBI chr 6:122,530,768...122,541,139
Ensembl chr 6:122,530,760...122,541,139 		JBrowse link
G Ctnnbl1 catenin, beta like 1 involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 2:157,579,321...157,733,823
Ensembl chr 2:157,579,321...157,733,534 		JBrowse link
G Polb polymerase (DNA directed), beta acts_upstream_of_or_within IMP (PMID:24388753) MGI PMID:24388753 NCBI chr 8:23,118,135...23,143,482
Ensembl chr 8:23,118,142...23,143,451 		JBrowse link
somatic diversification of immunoglobulins involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mad2l2 MAD2 mitotic arrest deficient-like 2 involved_in NAS (PMID:29656893) ComplexPortal PMID:29656893 NCBI chr 4:148,214,615...148,230,161
Ensembl chr 4:148,214,841...148,230,156 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in NAS (PMID:29656893) ComplexPortal PMID:29656893 NCBI chr 2:132,528,871...132,592,975
Ensembl chr 2:132,528,851...132,592,975 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in NAS (PMID:29656893) ComplexPortal PMID:29656893 NCBI chr14:33,958,905...34,032,528
Ensembl chr14:33,958,990...34,032,450 		JBrowse link
G Shld3 shieldin complex subunit 3 involved_in NAS (PMID:29656893) ComplexPortal PMID:29656893 NCBI chr13:104,310,228...104,314,967
Ensembl chr13:104,310,230...104,314,947 		JBrowse link
somatic hypermutation of immunoglobulin genes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr 6:122,530,768...122,541,139
Ensembl chr 6:122,530,760...122,541,139 		JBrowse link
G Exo1 exonuclease 1 acts_upstream_of_or_within IMP (PMID:14716311) MGI PMID:14716311 NCBI chr 1:175,708,334...175,738,962
Ensembl chr 1:175,708,147...175,741,055 		JBrowse link
G Hmces 5-hydroxymethylcytosine (hmC) binding, ES cell specific involved_in ISO
IDA		 (PMID:35450882) GO_Central
UniProt		 PMID:35450882 GO_REF:0000119 NCBI chr 6:87,890,889...87,913,603
Ensembl chr 6:87,890,917...87,913,611 		JBrowse link
G Ighd immunoglobulin heavy constant delta acts_upstream_of_or_within IMP (PMID:8418208) MGI PMID:8418208 NCBI chr12:113,371,155...113,379,944
Ensembl chr12:113,370,224...113,379,944 		JBrowse link
G Mcm3ap minichromosome maintenance complex component 3 associated protein involved_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr10:76,304,736...76,351,693
Ensembl chr10:76,304,761...76,351,691 		JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:10092760), (PMID:10429667) GO_Central
MGI		 PMID:10092760 PMID:10429667 GO_REF:0000033 NCBI chr 9:111,057,296...111,100,854
Ensembl chr 9:111,057,296...111,100,859 		JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within
NOT|acts_upstream_of_or_within		 IMP
IGI		 (PMID:9607916)
(PMID:14568978)
(PMID:9607915)
(PMID:9697842), (PMID:9697843)
(PMID:15494304)		 MGI PMID:9607915 PMID:9607916 PMID:9697842 PMID:9697843 PMID:14568978 More... NCBI chr17:87,979,960...88,031,141
Ensembl chr17:87,979,758...88,031,141 		JBrowse link
G Msh3 mutS homolog 3 NOT|acts_upstream_of_or_within IMP (PMID:10662804) MGI PMID:10662804 NCBI chr13:92,348,387...92,491,515
Ensembl chr13:92,348,380...92,491,511 		JBrowse link
G Msh6 mutS homolog 6 acts_upstream_of_or_within IMP (PMID:10662804), (PMID:15238604), (PMID:17015724)
(PMID:16618598)		 MGI PMID:10662804 PMID:15238604 PMID:16618598 PMID:17015724 NCBI chr17:88,282,478...88,298,320
Ensembl chr17:88,282,490...88,298,320 		JBrowse link
G Nuggc nuclear GTPase, germinal center associated acts_upstream_of_or_within IMP (PMID:22833677) MGI PMID:22833677 NCBI chr14:65,830,901...65,885,893
Ensembl chr14:65,835,995...65,885,980 		JBrowse link
G Pms2 PMS1 homolog2, mismatch repair system component involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:9618520)
(PMID:10429667)		 GO_Central
CAFA
MGI		 PMID:9618520 PMID:10429667 GO_REF:0000033 NCBI chr 5:143,846,379...143,922,538
Ensembl chr 5:143,846,782...143,870,786
Ensembl chr 5:143,846,782...143,870,786 		JBrowse link
G Polb polymerase (DNA directed), beta acts_upstream_of_or_within IMP (PMID:24388753) MGI PMID:24388753 NCBI chr 8:23,118,135...23,143,482
Ensembl chr 8:23,118,142...23,143,451 		JBrowse link
G Polm polymerase (DNA directed), mu acts_upstream_of_or_within IMP (PMID:15789338) MGI PMID:15789338 NCBI chr11:5,777,860...5,788,831
Ensembl chr11:5,777,860...5,788,016 		JBrowse link
G Polq polymerase (DNA directed), theta involved_in IMP (PMID:16172387), (PMID:16222339), (PMID:16890500) UniProt PMID:16172387 PMID:16222339 PMID:16890500 NCBI chr16:36,832,104...36,922,321
Ensembl chr16:36,832,148...36,915,779 		JBrowse link
G Samhd1 SAM domain and HD domain, 1 involved_in IMP (PMID:29669924) UniProt PMID:29669924 NCBI chr 2:156,939,454...156,977,016
Ensembl chr 2:156,939,453...156,977,185 		JBrowse link
G Ung uracil DNA glycosylase acts_upstream_of_or_within IGI
IMP		 (PMID:15494304)
(PMID:17015724)		 MGI PMID:15494304 PMID:17015724 NCBI chr 5:114,268,427...114,277,382
Ensembl chr 5:114,268,447...114,277,384 		JBrowse link
somatic recombination of immunoglobulin gene segments term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 acts_upstream_of_or_within IMP (PMID:11828012) MGI PMID:11828012 NCBI chr 9:111,057,296...111,100,854
Ensembl chr 9:111,057,296...111,100,859 		JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within IGI
IMP		 (PMID:15494304)
(PMID:14563316), (PMID:15955838)
(PMID:11828012)
(PMID:14568978)		 MGI PMID:11828012 PMID:14563316 PMID:14568978 PMID:15494304 PMID:15955838 NCBI chr17:87,979,960...88,031,141
Ensembl chr17:87,979,758...88,031,141 		JBrowse link
G Msh3 mutS homolog 3 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:15238604) GO_Central
MGI		 PMID:15238604 GO_REF:0000033 NCBI chr13:92,348,387...92,491,515
Ensembl chr13:92,348,380...92,491,511 		JBrowse link
G Msh6 mutS homolog 6 acts_upstream_of_or_within IMP (PMID:15238604) MGI PMID:15238604 NCBI chr17:88,282,478...88,298,320
Ensembl chr17:88,282,490...88,298,320 		JBrowse link
G Pms2 PMS1 homolog2, mismatch repair system component acts_upstream_of_or_within IMP (PMID:11828012) MGI PMID:11828012 NCBI chr 5:143,846,379...143,922,538
Ensembl chr 5:143,846,782...143,870,786
Ensembl chr 5:143,846,782...143,870,786 		JBrowse link
G Ung uracil DNA glycosylase acts_upstream_of_or_within IMP
IGI		 (PMID:15494304) MGI PMID:15494304 NCBI chr 5:114,268,427...114,277,382
Ensembl chr 5:114,268,447...114,277,384 		JBrowse link
somatic recombination of immunoglobulin genes involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 acts_upstream_of_or_within IGI (PMID:12743174) MGI PMID:12743174 NCBI chr 9:111,057,296...111,100,854
Ensembl chr 9:111,057,296...111,100,859 		JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within
involved_in		 IGI
IBA		 (PMID:12743174) MGI
GO_Central		 PMID:12743174 GO_REF:0000033 NCBI chr17:87,979,960...88,031,141
Ensembl chr17:87,979,758...88,031,141 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28632
    immune system process 3179
      production of molecular mediator of immune response 262
        antimicrobial peptide production + 13
        cytokine production involved in immune response + 141
        granulysin production 0
        granzyme A production + 1
        granzyme B production + 3
        immunoglobulin production + 126
        negative regulation of production of molecular mediator of immune response + 50
        perforin production 0
        positive regulation of production of molecular mediator of immune response + 159
        regulation of production of molecular mediator of immune response + 225
Path 2
Term Annotations click to browse term
  biological_process 28632
    cellular process 18393
      metabolic process 11633
        biosynthetic process 7616
          macromolecule biosynthetic process 7293
            gene expression 6856
              production of molecular mediator of immune response 262
                antimicrobial peptide production + 13
                cytokine production involved in immune response + 141
                granulysin production 0
                granzyme A production + 1
                granzyme B production + 3
                immunoglobulin production + 126
                negative regulation of production of molecular mediator of immune response + 50
                perforin production 0
                positive regulation of production of molecular mediator of immune response + 159
                regulation of production of molecular mediator of immune response + 225
paths to the root