ONTOLOGY REPORT - ANNOTATIONS
Term: cytokine production involved in immune response
Accession: GO:0002367
browse the term
Definition: The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus contributing to an immune response, resulting in an increase in its intracellular or extracellular levels.
Comment: Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select one of the 'regulation' children terms.
Synonyms: narrow_synonym: cytokine biosynthetic process involved in immune response
related_synonym: cytokine production during immune response; cytokine secretion during immune response; cytokine secretion involved in immune response
alt_id: GO:0002374; GO:0002375
G
Angpt1
angiopoietin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:20060382)
Ensembl RGD
PMID:20060382
GO_REF:0000107
NCBI chr 7:75,415,959...75,668,696
Ensembl chr 7:73,531,486...73,784,067
G
Apoa1
apolipoprotein A1
involved_in
ISO IEA
(PMID:12458630) GO_REF:0000107
RGD Ensembl
PMID:12458630
GO_REF:0000107
NCBI chr 8:55,423,945...55,425,729
Ensembl chr 8:46,527,144...46,529,035
G
Apoa2
apolipoprotein A2
involved_in
ISO
(PMID:12458630)
RGD
PMID:12458630
NCBI chr13:86,176,767...86,178,819
Ensembl chr13:83,644,470...83,646,355
G
Il10
interleukin 10
involved_in
ISS ISO
GO_REF:0000024 (PMID:10443688)
UniProt RGD
PMID:10443688
GO_REF:0000024
NCBI chr13:45,024,921...45,029,586
Ensembl chr13:42,472,839...42,477,313
G
Tnf
tumor necrosis factor
involved_in
ISO
(PMID:10443688)
RGD
PMID:10443688
NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629
G
Jak3
Janus kinase 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:16020505)
BHF-UCL RGD
PMID:16020505
GO_REF:0000024
NCBI chr16:18,418,807...18,432,515
Ensembl chr16:18,386,405...18,398,536
G
Acp5
acid phosphatase 5, tartrate resistant
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2180086 (PMID:11168643)
Ensembl RGD
PMID:11168643
GO_REF:0000107
NCBI chr 8:28,939,984...28,946,639
Ensembl chr 8:20,663,985...20,667,929
G
Atg9a
autophagy related 9A
acts_upstream_of_or_within
ISO
(PMID:24670807)
RGD
PMID:24670807
NCBI chr 9:84,126,071...84,136,723
Ensembl chr 9:76,677,404...76,687,986
G
Axl
Axl receptor tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:107670 (PMID:16831897)
RGD
PMID:16831897
NCBI chr 1:90,392,864...90,424,123
Ensembl chr 1:81,265,088...81,296,265
G
Cuedc2
CUE domain containing 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:24882011) MGI:5635142 (PMID:24882011) GO_REF:0000107
RGD Ensembl
PMID:24882011
GO_REF:0000107
NCBI chr 1:245,192,057...245,200,594
Ensembl chr 1:245,192,063...245,200,339
G
Epx
eosinophil peroxidase
acts_upstream_of_or_within
ISO
MGI:2182952 (PMID:16926417)
RGD
PMID:16926417
NCBI chr10:73,164,096...73,175,180
Ensembl chr10:72,666,865...72,677,952
G
Irak3
interleukin-1 receptor-associated kinase 3
involved_in
ISO
(PMID:12150927)
RGD
PMID:12150927
NCBI chr 7:57,538,522...57,600,166
Ensembl chr 7:55,653,962...55,713,121
G
Nlrx1
NLR family member X1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:5141085 (PMID:21703540)
Ensembl RGD
PMID:21703540
GO_REF:0000107
NCBI chr 8:53,486,866...53,503,498
Ensembl chr 8:44,590,048...44,606,484
G
Nod2
nucleotide-binding oligomerization domain containing 2
acts_upstream_of_or_within
ISO
MGI:2680581 (PMID:15220916)
RGD
PMID:15220916
NCBI chr19:34,555,832...34,596,281
Ensembl chr19:18,382,439...18,417,177
G
Prg2
proteoglycan 2, pro eosinophil major basic protein
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3027719 (PMID:16926417)
Ensembl RGD
PMID:16926417
GO_REF:0000107
NCBI chr 3:90,469,192...90,472,759
Ensembl chr 3:70,062,535...70,066,101
G
Tgfb1
transforming growth factor, beta 1
involved_in
ISO ISS
(PMID:20875417) GO_REF:0000024
RGD AgBase
PMID:20875417
GO_REF:0000024
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:20875417)
AgBase RGD
PMID:20875417
GO_REF:0000024
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
G
Tgfb3
transforming growth factor, beta 3
involved_in
ISO ISS
(PMID:20875417) GO_REF:0000024
RGD AgBase
PMID:20875417
GO_REF:0000024
NCBI chr 6:111,435,170...111,457,646
Ensembl chr 6:105,704,236...105,726,564
G
Twist1
twist family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:104685 (PMID:16831897)
RGD
PMID:16831897
NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653
G
Twist2
twist family bHLH transcription factor 2
acts_upstream_of_or_within
ISO
MGI:3044412|MGI:98872 (PMID:16831897)
RGD
PMID:16831897
NCBI chr 9:99,822,242...99,866,722
Ensembl chr 9:92,374,574...92,419,222
G
Bcl6
BCL6, transcription repressor
acts_upstream_of_or_within
ISO
MGI:2158436 (PMID:15950739)
RGD
PMID:15950739
NCBI chr11:90,358,753...90,382,049
Ensembl chr11:76,854,090...76,877,389
G
Hmox1
heme oxygenase 1
IDA
RGD
PMID:17234154
RGD:1601626
NCBI chr19:13,452,365...13,479,823
Ensembl chr19:13,467,244...13,474,079
G
Rabgef1
RAB guanine nucleotide exchange factor 1
acts_upstream_of_or_within
ISO
MGI:3051384 (PMID:16533754)
RGD
PMID:16533754
NCBI chr12:32,096,338...32,139,949
Ensembl chr12:26,460,175...26,503,744
G
Cd96
CD96 molecule
acts_upstream_of_or_within
ISO
MGI:5617136 (PMID:24658051)
RGD
PMID:24658051
NCBI chr11:68,164,926...68,239,266
Ensembl chr11:54,702,290...54,776,621
G
RT1-CE5
RT1 class I, locus CE5
involved_in
ISO
(PMID:24018270)
RGD
PMID:24018270
NCBI chr20:3,407,880...3,484,130
G
Bst2
bone marrow stromal cell antigen 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:19564354)
UniProt RGD
PMID:19564354
GO_REF:0000024
NCBI chr16:18,250,593...18,254,967
Ensembl chr16:18,217,407...18,220,979
G
Foxp3
forkhead box P3
involved_in
ISO
(PMID:15466453), (PMID:23169781)
RGD
PMID:15466453 PMID:23169781
NCBI chr X:17,580,380...17,601,181
Ensembl chr X:14,908,494...14,923,838
G
Hfe
homeostatic iron regulator
involved_in
ISO
UniProtKB:P04439 (PMID:24643698)
RGD
PMID:24643698
NCBI chr17:41,841,302...41,849,359
Ensembl chr17:41,413,451...41,421,502
G
Lilrb4
leukocyte immunoglobulin like receptor B4
involved_in
ISO
(PMID:18420485)
RGD
PMID:18420485
NCBI chr 1:78,847,685...78,853,294
Ensembl chr 1:69,805,250...69,810,660
G
RT1-CE5
RT1 class I, locus CE5
involved_in
ISO
(PMID:24018270)
RGD
PMID:24018270
NCBI chr20:3,407,880...3,484,130
G
Slamf1
signaling lymphocytic activation molecule family member 1
involved_in
ISO
(PMID:11477403)
RGD
PMID:11477403
NCBI chr13:86,802,708...86,837,890
Ensembl chr13:84,270,316...84,305,497
G
Smad7
SMAD family member 7
involved_in
IEA ISO
GO_REF:0000107 (PMID:25642768)
Ensembl RGD
PMID:25642768
GO_REF:0000107
NCBI chr18:71,263,508...71,291,849
Ensembl chr18:68,988,429...69,016,765
G
Vsir
V-set immunoregulatory receptor
acts_upstream_of_or_within
ISO
(PMID:21383057)
RGD
PMID:21383057
NCBI chr20:28,281,582...28,307,262
Ensembl chr20:28,281,596...28,303,878
G
Xcl1
X-C motif chemokine ligand 1
involved_in
ISO
(PMID:10887101)
RGD
PMID:10887101
NCBI chr13:79,781,784...79,785,440
Ensembl chr13:77,248,717...77,252,329
G
Arg1
arginase 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19360123)
Ensembl RGD
PMID:19360123
GO_REF:0000107
NCBI chr 1:22,295,093...22,307,720
Ensembl chr 1:20,475,968...20,488,422
G
Ifnb1
interferon beta 1
involved_in
ISO
(PMID:20554961)
RGD
PMID:20554961
NCBI chr 5:108,066,650...108,067,487
Ensembl chr 5:103,020,969...103,021,523
G
Tbx21
T-box transcription factor 21
involved_in
ISO
(PMID:10761931), (PMID:23616576)
RGD
PMID:10761931 PMID:23616576
NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831
G
Clec7a
C-type lectin domain containing 7A
involved_in
IBA ISO
GO_REF:0000033 (PMID:27288407)
GO_Central RGD
PMID:27288407
GO_REF:0000033
NCBI chr 4:164,588,737...164,599,953
Ensembl chr 4:162,902,732...162,913,897
G
Defb43
defensin beta 43
involved_in
ISO
(PMID:26649771)
RGD
PMID:26649771
NCBI chr15:41,447,875...41,452,769
Ensembl chr15:37,272,008...37,276,626
G
F2rl1
F2R like trypsin receptor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:11441110)
UniProt RGD
PMID:11441110
GO_REF:0000024
NCBI chr 2:28,507,003...28,519,954
Ensembl chr 2:26,772,278...26,785,226
G
Ffar2
free fatty acid receptor 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:23665276)
UniProt RGD
PMID:23665276
GO_REF:0000024
NCBI chr 1:95,199,277...95,202,599
Ensembl chr 1:86,072,184...86,075,033
G
Ffar3
free fatty acid receptor 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:23665276)
UniProt RGD
PMID:23665276
GO_REF:0000024
NCBI chr 1:86,105,388...86,106,728
Ensembl chr 1:86,104,920...86,106,849
G
Hk1
hexokinase 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:27374331)
Ensembl RGD
PMID:27374331
GO_REF:0000107
NCBI chr20:30,773,222...30,874,814
Ensembl chr20:30,230,486...30,332,131
G
Htr2a
5-hydroxytryptamine receptor 2A
IMP
RGD
PMID:19318092
RGD:401901206
NCBI chr15:56,360,647...56,428,703
Ensembl chr15:49,950,804...50,020,928
G
Inava
innate immunity activator
involved_in
ISO
(PMID:28436939)
RGD
PMID:28436939
NCBI chr13:50,218,149...50,238,430
Ensembl chr13:47,666,447...47,686,729
G
Irf5
interferon regulatory factor 5
involved_in
ISO
(PMID:29046356)
RGD
PMID:29046356
NCBI chr 4:59,092,914...59,104,596
Ensembl chr 4:58,127,640...58,139,267
G
Lacc1
laccase domain containing 1
involved_in
ISO
(PMID:28593945)
RGD
PMID:28593945
NCBI chr15:58,799,477...58,816,840
Ensembl chr15:52,395,183...52,407,545
G
Laptm5
lysosomal protein transmembrane 5
involved_in
ISO
(PMID:22733818)
RGD
PMID:22733818
NCBI chr 5:148,371,880...148,393,927
Ensembl chr 5:143,087,759...143,109,807
G
Nlrp3
NLR family, pyrin domain containing 3
involved_in
ISO
(PMID:27374331)
RGD
PMID:27374331
NCBI chr10:44,826,299...44,853,373
Ensembl chr10:44,328,566...44,352,811
G
Nod2
nucleotide-binding oligomerization domain containing 2
involved_in
ISO
(PMID:16260731)
RGD
PMID:16260731
NCBI chr19:34,555,832...34,596,281
Ensembl chr19:18,382,439...18,417,177
G
Scimp
SLP adaptor and CSK interacting membrane protein
involved_in
ISO
(PMID:27288407)
RGD
PMID:27288407
NCBI chr10:56,006,243...56,026,357
Ensembl chr10:55,507,519...55,528,171
G
Sphk2
sphingosine kinase 2
involved_in
ISO
(PMID:17346996)
RGD
PMID:17346996
NCBI chr 1:105,317,332...105,324,985
Ensembl chr 1:96,180,887...96,188,391
G
Tek
TEK receptor tyrosine kinase
acts_upstream_of_or_within
ISO
(PMID:20060382)
RGD
PMID:20060382
NCBI chr 5:114,722,815...114,849,535
Ensembl chr 5:109,607,077...109,733,804
G
Tnfrsf14
TNF receptor superfamily member 14
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:4940320 (PMID:21236258)
GO_Central RGD
PMID:21236258
GO_REF:0000033
NCBI chr 5:170,768,413...170,776,749
Ensembl chr 5:165,484,262...165,493,703
G
Trim6
tripartite motif containing 6
involved_in
ISO
(PMID:24882218)
RGD
PMID:24882218
NCBI chr 1:168,095,619...168,108,809
Ensembl chr 1:158,683,746...158,696,914
G
Wnt5a
Wnt family member 5A
involved_in
ISO
(PMID:18174455)
RGD
PMID:18174455
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
G
Clec7a
C-type lectin domain containing 7A
involved_in
ISO
(PMID:19136564), (PMID:27288407)
RGD
PMID:19136564 PMID:27288407
NCBI chr 4:164,588,737...164,599,953
Ensembl chr 4:162,902,732...162,913,897
G
Kit
KIT proto-oncogene receptor tyrosine kinase
involved_in
ISO
(PMID:18454155)
RGD
PMID:18454155
NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
G
Nod2
nucleotide-binding oligomerization domain containing 2
IDA
RGD
PMID:16818757
RGD:1600784
NCBI chr19:34,555,832...34,596,281
Ensembl chr19:18,382,439...18,417,177
G
Plcg2
phospholipase C, gamma 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:19136564)
Ensembl RGD
PMID:19136564
GO_REF:0000107
NCBI chr19:62,456,196...62,592,684
Ensembl chr19:45,547,416...45,683,930
G
Scimp
SLP adaptor and CSK interacting membrane protein
involved_in
ISO
(PMID:27288407)
RGD
PMID:27288407
NCBI chr10:56,006,243...56,026,357
Ensembl chr10:55,507,519...55,528,171
G
Card9
caspase recruitment domain family, member 9
acts_upstream_of_or_within
ISO
MGI:3698412 (PMID:17187069)
RGD
PMID:17187069
NCBI chr 3:29,569,907...29,578,402
Ensembl chr 3:9,171,815...9,180,237
G
Casp1
caspase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:18490713)
Ensembl RGD
PMID:18490713
GO_REF:0000107
NCBI chr 8:10,746,338...10,882,295
Ensembl chr 8:2,587,831...2,597,383
G
Casp4
caspase 4
acts_upstream_of_or_within
ISO
MGI:1931465|MGI:2653833 (PMID:22002608)
RGD
PMID:22002608
NCBI chr 8:10,883,817...10,919,978
Ensembl chr 8:2,598,876...2,635,092
G
Cd36
CD36 molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2447190|MGI:3573941 (PMID:15690042), (PMID:16061696)
Ensembl RGD
PMID:15690042 PMID:16061696
GO_REF:0000107
NCBI chr 4:18,209,088...18,302,142
Ensembl chr 4:17,354,466...17,513,903
G
Cd74
CD74 molecule
involved_in
ISS ISO IBA
GO_REF:0000024 (PMID:19413900) GO_REF:0000033
BHF-UCL RGD GO_Central
PMID:19413900
GO_REF:0000024 GO_REF:0000033
NCBI chr18:56,527,071...56,536,406
Ensembl chr18:54,256,778...54,266,003
G
Gprc5b
G protein-coupled receptor, class C, group 5, member B
involved_in
ISO
(PMID:23169819)
RGD
PMID:23169819
NCBI chr 1:173,316,904...173,340,933
Ensembl chr 1:173,316,907...173,340,932
G
Ifng
interferon gamma
acts_upstream_of_or_within
ISO
(PMID:9348310)
RGD
PMID:9348310
NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:53,903,337...53,907,375
G
Laptm5
lysosomal protein transmembrane 5
involved_in
ISO
(PMID:22733818)
RGD
PMID:22733818
NCBI chr 5:148,371,880...148,393,927
Ensembl chr 5:143,087,759...143,109,807
G
Mapkapk2
MAPK activated protein kinase 2
acts_upstream_of_or_within
ISO
(PMID:24020373)
RGD
PMID:24020373
NCBI chr13:45,066,027...45,112,326
Ensembl chr13:42,513,762...42,560,457
G
Mir324
microRNA 324
acts_upstream_of_or_within
ISO
(PMID:24882011)
RGD
PMID:24882011
NCBI chr10:54,734,680...54,734,762
Ensembl chr10:54,734,678...54,734,766
G
Myd88
MYD88, innate immune signal transduction adaptor
acts_upstream_of_or_within
ISO
MGI:2147032|MGI:2385681 (PMID:10607756), (PMID:11067888), (PMID:12872135)
RGD
PMID:10607756 PMID:11067888 PMID:12872135
NCBI chr 8:127,952,161...127,956,230
Ensembl chr 8:119,074,437...119,079,415
G
Nod1
nucleotide-binding oligomerization domain containing 1
acts_upstream_of_or_within
ISO
MGI:2429397|MGI:2674231 (PMID:18261938)
RGD
PMID:18261938
NCBI chr 4:85,391,142...85,442,281
Ensembl chr 4:84,060,880...84,111,404
G
Nod2
nucleotide-binding oligomerization domain containing 2
acts_upstream_of_or_within
ISO
MGI:1341839|MGI:2680581|MGI:3529594 (PMID:14560001), (PMID:15220916), (PMID:15692051), (PMID:18261938)
RGD
PMID:14560001 PMID:15220916 PMID:15692051 PMID:18261938
NCBI chr19:34,555,832...34,596,281
Ensembl chr19:18,382,439...18,417,177
G
P2rx7
purinergic receptor P2X 7
acts_upstream_of_or_within
ISO
MGI:2386080|MGI:3606250 (PMID:11016935), (PMID:18490713)
RGD
PMID:11016935 PMID:18490713
NCBI chr12:39,550,531...39,594,984
Ensembl chr12:33,879,745...33,934,619
G
Panx1
Pannexin 1
acts_upstream_of_or_within
ISO
(PMID:18490713)
RGD
PMID:18490713
NCBI chr 8:20,128,783...20,171,200
Ensembl chr 8:11,850,730...11,889,774
G
Plcg2
phospholipase C, gamma 2
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 (PMID:22041900)
Ensembl RGD
PMID:22041900
GO_REF:0000107
NCBI chr19:62,456,196...62,592,684
Ensembl chr19:45,547,416...45,683,930
G
Pycard
PYD and CARD domain containing
acts_upstream_of_or_within
ISO
MGI:107700|MGI:2653833 (PMID:22002608)
RGD
PMID:22002608
NCBI chr 1:192,032,124...192,033,419
Ensembl chr 1:182,601,174...182,602,955
G
Ripk2
receptor-interacting serine-threonine kinase 2
acts_upstream_of_or_within
ISO
MGI:2660793 (PMID:11894098), (PMID:18261938)
RGD
PMID:11894098 PMID:18261938
NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:29,631,570...29,662,657
G
RT1-M3-1
RT1 class Ib, locus M3, gene 1
involved_in
ISO
(PMID:19304799)
RGD
PMID:19304799
NCBI chr20:1,329,227...1,333,394
Ensembl chr20:1,287,521...1,328,117
G
Rtn4
reticulon 4
involved_in
ISS ISO
GO_REF:0000024 (PMID:19805174)
UniProt RGD
PMID:19805174
GO_REF:0000024
NCBI chr14:107,651,001...107,698,610
Ensembl chr14:103,449,930...103,497,686
G
Sema7a
semaphorin 7A (John Milton Hagen blood group)
involved_in
ISO
(PMID:17377534)
RGD
PMID:17377534
NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
G
Sirt1
sirtuin 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:22315447)
Ensembl RGD
PMID:22315447
GO_REF:0000107
NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260
G
Spon2
spondin 2
acts_upstream_of_or_within
ISO
MGI:3026870 (PMID:14691481)
RGD
PMID:14691481
NCBI chr14:81,713,070...81,742,510
Ensembl chr14:77,511,901...77,517,996
G
Ticam1
TIR domain containing adaptor molecule 1
acts_upstream_of_or_within
ISO
MGI:108005|MGI:2679794|MGI:3029019 (PMID:12855817), (PMID:12872135)
RGD
PMID:12855817 PMID:12872135
NCBI chr 9:1,189,717...1,197,730
Ensembl chr 9:1,102,366...1,123,147
G
Tirap
TIR domain containing adaptor protein
acts_upstream_of_or_within
ISO
MGI:3573942 (PMID:15690042)
RGD
PMID:15690042
NCBI chr 8:41,789,557...41,805,903
Ensembl chr 8:33,531,725...33,547,432
G
Tlr2
toll-like receptor 2
acts_upstream_of_or_within
ISO
MGI:2178675|MGI:2674036 (PMID:10549626), (PMID:11067888), (PMID:15690042), (PMID:18261938)
RGD
PMID:10549626 PMID:11067888 PMID:15690042 PMID:18261938
NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:169,197,419...169,206,630
G
Tlr3
toll-like receptor 3
acts_upstream_of_or_within
ISO
MGI:3690535 (PMID:12855817), (PMID:18261938)
RGD
PMID:12855817 PMID:18261938
NCBI chr16:53,554,916...53,572,321
Ensembl chr16:46,822,039...46,836,545
G
Tlr4
toll-like receptor 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857718|MGI:1860755|MGI:1860885 (PMID:10549626), (PMID:10607756), (PMID:10623794), (PMID:14691481), (PMID:15661922), (PMID:18261938), (PMID:21609717)
Ensembl RGD
PMID:10549626 PMID:10607756 PMID:10623794 PMID:14691481 PMID:15661922 PMID:18261938 PMID:21609717 More...
GO_REF:0000107
NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:80,145,826...80,159,628
G
Tlr7
toll-like receptor 7
acts_upstream_of_or_within
ISO
(PMID:18261938)
RGD
PMID:18261938
NCBI chr X:30,644,324...30,670,796
Ensembl chr X:27,027,425...27,054,754
G
Wnt5a
Wnt family member 5A
involved_in
ISO IEA
(PMID:18174455) GO_REF:0000107
RGD Ensembl
PMID:18174455
GO_REF:0000107
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
G
Fcer1a
Fc epsilon receptor Ia
acts_upstream_of_or_within
ISO
(PMID:9000133)
RGD
PMID:9000133
NCBI chr13:88,218,427...88,224,723
Ensembl chr13:85,686,092...85,692,351
G
Fcer1g
Fc epsilon receptor Ig
acts_upstream_of_or_within
ISO
MGI:2384004 (PMID:14764707)
RGD
PMID:14764707
NCBI chr13:86,181,908...86,186,766
Ensembl chr13:83,649,449...83,671,443
G
Kit
KIT proto-oncogene receptor tyrosine kinase
involved_in
ISO
(PMID:20100931)
RGD
PMID:20100931
NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
G
Nr4a3
nuclear receptor subfamily 4, group A, member 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:24586680)
UniProt RGD
PMID:24586680
GO_REF:0000024
NCBI chr 5:67,157,141...67,198,287
Ensembl chr 5:62,361,822...62,402,733
G
Syk
spleen associated tyrosine kinase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2384078 (PMID:9000133)
Ensembl RGD
PMID:9000133
GO_REF:0000107
NCBI chr17:12,756,493...12,830,927
Ensembl chr17:12,604,619...12,661,410
G
Camk4
calcium/calmodulin-dependent protein kinase IV
NOT|involved_in
ISO
(PMID:17909078)
RGD
PMID:17909078
NCBI chr18:24,857,152...25,076,054
Ensembl chr18:24,585,269...24,802,487
G
Ddx1
DEAD-box helicase 1
involved_in
ISO
(PMID:21703541)
RGD
PMID:21703541
NCBI chr 6:41,725,365...41,756,236
Ensembl chr 6:35,996,469...36,027,365
G
Ddx21
DExD-box helicase 21
involved_in
ISO
(PMID:21703541)
RGD
PMID:21703541
NCBI chr20:31,077,044...31,097,238
Ensembl chr20:30,534,319...30,554,543
G
Dhx36
DEAH-box helicase 36
involved_in
ISO
(PMID:21703541)
RGD
PMID:21703541
NCBI chr 2:149,006,089...149,044,192
Ensembl chr 2:146,856,469...146,894,572
G
Mavs
mitochondrial antiviral signaling protein
involved_in
ISS ISO
GO_REF:0000024 (PMID:21703541)
UniProt RGD
PMID:21703541
GO_REF:0000024
NCBI chr 3:138,904,673...138,919,129
Ensembl chr 3:118,451,743...118,466,094
G
Rig1
RNA sensor RIG-1
involved_in
ISO
(PMID:21703541)
RGD
PMID:21703541
NCBI chr 5:60,117,398...60,165,995
Ensembl chr 5:55,321,235...55,370,819
G
Ticam1
TIR domain containing adaptor molecule 1
involved_in
ISO
(PMID:21703541)
RGD
PMID:21703541
NCBI chr 9:1,189,717...1,197,730
Ensembl chr 9:1,102,366...1,123,147
G
Mif
macrophage migration inhibitory factor
involved_in
ISO
(PMID:11756671)
RGD
PMID:11756671
NCBI chr20:12,767,138...12,791,222
Ensembl chr20:12,790,902...12,799,504 Ensembl chr 4:12,790,902...12,799,504
G
Cd160
CD160 molecule
involved_in
ISO
(PMID:17307798)
RGD
PMID:17307798
NCBI chr 2:187,029,654...187,042,447
Ensembl chr 2:184,340,599...184,375,834
G
Cd226
CD226 molecule
acts_upstream_of_or_within
ISO
MGI:4454325 (PMID:24658051)
RGD
PMID:24658051
NCBI chr18:84,723,330...84,819,836
Ensembl chr18:82,450,568...82,543,051
G
Clnk
cytokine-dependent hematopoietic cell linker
involved_in
ISO
(PMID:16439675)
RGD
PMID:16439675
NCBI chr14:76,136,446...76,315,364
Ensembl chr14:71,873,105...72,101,208
G
Gimap5
GTPase, IMAP family member 5
IMP
RGD
PMID:15100275
RGD:2303778
NCBI chr 4:79,025,151...79,031,917
Ensembl chr 4:77,687,564...77,703,086
G
Il21
interleukin 21
acts_upstream_of_or_within
ISO
(PMID:14764669)
RGD
PMID:14764669
NCBI chr 2:122,045,240...122,055,142
Ensembl chr 2:120,119,444...120,126,996
G
RT1-A2
RT1 class Ia, locus A2
involved_in
ISO
(PMID:30134159)
RGD
PMID:30134159
NCBI chr20:4,872,720...4,876,425
G
RT1-CE5
RT1 class I, locus CE5
involved_in
ISO
(PMID:27455421)
RGD
PMID:27455421
NCBI chr20:3,407,880...3,484,130
G
RT1-M3-1
RT1 class Ib, locus M3, gene 1
involved_in
ISO
(PMID:16366734), (PMID:19304799), (PMID:23184984)
RGD
PMID:16366734 PMID:19304799 PMID:23184984
NCBI chr20:1,329,227...1,333,394
Ensembl chr20:1,287,521...1,328,117
G
B2m
beta-2 microglobulin
involved_in
ISO IEA
(PMID:24643698) GO_REF:0000107
RGD Ensembl
PMID:24643698
GO_REF:0000107
NCBI chr 3:129,549,236...129,555,354
Ensembl chr 3:109,095,729...109,101,766
G
Cd55
CD55 molecule (Cromer blood group)
involved_in
ISO
(PMID:16818763)
RGD
PMID:16818763
NCBI chr13:44,409,574...44,438,913
Ensembl chr13:41,857,395...41,885,831
G
Cd7
Cd7 molecule
involved_in
ISO
(PMID:10652336)
RGD
PMID:10652336
NCBI chr10:106,304,046...106,306,963
Ensembl chr10:106,304,056...106,306,967
G
Fzd5
frizzled class receptor 5
involved_in
ISO IEA
(PMID:16601243) GO_REF:0000107
RGD Ensembl
PMID:16601243
GO_REF:0000107
NCBI chr 9:73,606,860...73,614,039
Ensembl chr 9:66,113,112...66,121,457
G
Malt1
MALT1 paracaspase
involved_in
ISO
(PMID:15125833)
RGD
PMID:15125833
NCBI chr18:61,212,290...61,266,272
Ensembl chr18:58,942,299...58,994,260
G
Map3k7
mitogen activated protein kinase kinase kinase 7
involved_in
ISO
(PMID:15125833)
RGD
PMID:15125833
NCBI chr 5:51,149,524...51,212,012
Ensembl chr 5:46,357,931...46,415,597
G
RT1-CE16
RT1 class I, locus CE16
involved_in
ISO
(PMID:24643698)
RGD
PMID:24643698
NCBI chr20:3,261,656...3,265,548
Ensembl chr20:3,257,123...3,279,563
G
Sash3
SAM and SH3 domain containing 3
acts_upstream_of_or_within
ISO
MGI:3716944 (PMID:16227612)
RGD
PMID:16227612
NCBI chr X:127,326,815...127,341,521
Ensembl chr X:127,326,859...127,341,519
G
Sectm1b
secreted and transmembrane 1B
involved_in
ISO
(PMID:22184754)
RGD
PMID:22184754
NCBI chr10:106,324,070...106,333,779
Ensembl chr10:106,325,203...106,333,769
G
Tnfsf4
TNF superfamily member 4
involved_in
ISO
(PMID:18354165), (PMID:9670042)
RGD
PMID:9670042 PMID:18354165
NCBI chr13:76,256,654...76,280,133
Ensembl chr13:73,723,329...73,746,788
G
Traf2
Tnf receptor-associated factor 2
involved_in
ISO
(PMID:15125833)
RGD
PMID:15125833
NCBI chr 3:28,740,098...28,764,752
Ensembl chr 3:8,341,951...8,366,538
G
Traf6
TNF receptor associated factor 6
involved_in
ISO IEA
(PMID:15125833) GO_REF:0000107
RGD Ensembl
PMID:15125833
GO_REF:0000107
NCBI chr 3:108,418,537...108,443,330
Ensembl chr 3:87,963,514...87,983,507
G
Xcl1
X-C motif chemokine ligand 1
involved_in
ISO
(PMID:9029087)
RGD
PMID:9029087
NCBI chr13:79,781,784...79,785,440
Ensembl chr13:77,248,717...77,252,329
G
Arid5a
AT-rich interaction domain 5A
involved_in
ISO
(PMID:27671645)
RGD
PMID:27671645
NCBI chr 9:46,030,513...46,058,729
Ensembl chr 9:38,534,590...38,547,597
G
Il18
interleukin 18
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:10653850) GO_REF:0000024
Ensembl RGD UniProt
PMID:10653850
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:59,802,072...59,829,275
Ensembl chr 8:50,906,960...50,932,887
G
Il18r1
interleukin 18 receptor 1
involved_in
ISO
(PMID:10653850)
RGD
PMID:10653850
NCBI chr 9:50,223,274...50,257,370
Ensembl chr 9:42,727,869...42,760,715
G
Il1b
interleukin 1 beta
involved_in
ISO ISS
(PMID:10653850) GO_REF:0000024
RGD UniProt
PMID:10653850
GO_REF:0000024
NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:116,577,010...116,583,415
G
Il1r1
interleukin 1 receptor type 1
involved_in
ISO ISS IEA
(PMID:10653850) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:10653850
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:50,000,558...50,076,579
Ensembl chr 9:42,504,735...42,579,937
G
Slamf1
signaling lymphocytic activation molecule family member 1
involved_in
ISO
(PMID:9126961)
RGD
PMID:9126961
NCBI chr13:86,802,708...86,837,890
Ensembl chr13:84,270,316...84,305,497
G
Tbx21
T-box transcription factor 21
involved_in
ISO
(PMID:10761931)
RGD
PMID:10761931
NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831
G
Xcl1
X-C motif chemokine ligand 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:9973465)
Ensembl RGD
PMID:9973465
GO_REF:0000107
NCBI chr13:79,781,784...79,785,440
Ensembl chr13:77,248,717...77,252,329
G
Cd81
Cd81 molecule
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:8766544) GO_REF:0000107 (PMID:11046035)
UniProt RGD Ensembl
PMID:8766544 PMID:11046035
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:207,665,274...207,681,094
Ensembl chr 1:198,241,484...198,251,660
G
Dennd1b
DENN domain containing 1B
involved_in
ISO
(PMID:26774822)
RGD
PMID:26774822
NCBI chr13:53,096,717...53,324,372
Ensembl chr13:50,545,836...50,770,601
G
Gata3
GATA binding protein 3
acts_upstream_of_or_within
ISO
(PMID:15087456)
RGD
PMID:15087456
NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391
G
Il4
interleukin 4
involved_in
ISO
(PMID:20554961)
RGD
PMID:20554961
NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750
G
Il6
interleukin 6
involved_in
ISO
(PMID:11159963)
RGD
PMID:11159963
NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178
G
Nlrp3
NLR family, pyrin domain containing 3
involved_in
ISO
(PMID:26098997)
RGD
PMID:26098997
NCBI chr10:44,826,299...44,853,373
Ensembl chr10:44,328,566...44,352,811
G
Prkcz
protein kinase C, zeta
involved_in
ISS ISO
GO_REF:0000024 (PMID:15987782)
UniProt RGD
PMID:15987782
GO_REF:0000024
NCBI chr 5:171,101,774...171,212,694
Ensembl chr 5:165,819,466...165,930,367
G
Rsad2
radical S-adenosyl methionine domain containing 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:19047684) GO_REF:0000107
UniProt RGD Ensembl
PMID:19047684
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:48,774,985...48,788,245
Ensembl chr 6:43,047,658...43,059,699
G
Xcl1
X-C motif chemokine ligand 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:9973465)
Ensembl RGD
PMID:9973465
GO_REF:0000107
NCBI chr13:79,781,784...79,785,440
Ensembl chr13:77,248,717...77,252,329
G
Atg5
autophagy related 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:22710871)
Ensembl RGD
PMID:22710871
GO_REF:0000107
NCBI chr20:49,380,835...49,471,826
Ensembl chr20:47,798,290...47,889,209
G
Pkp3
plakophilin 3
involved_in
ISO
(PMID:26173741)
RGD
PMID:26173741
NCBI chr 1:205,617,511...205,628,441
Ensembl chr 1:196,187,835...196,198,844
G
Tnfrsf1b
TNF receptor superfamily member 1B
involved_in
ISO
UniProtKB:Q9Z0D9 (PMID:28052249)
RGD
PMID:28052249
NCBI chr 5:162,356,250...162,387,411
Ensembl chr 5:157,070,642...157,104,206
G
Tril
TLR4 interactor with leucine-rich repeats
involved_in
ISO IBA
(PMID:19710467) GO_REF:0000033
RGD GO_Central
PMID:19710467
GO_REF:0000033
NCBI chr 4:84,252,781...84,257,626
Ensembl chr 4:82,922,328...82,927,172
G
Tlr2
toll-like receptor 2
acts_upstream_of_or_within
ISO
(PMID:19047410)
RGD
PMID:19047410
NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:169,197,419...169,206,630
G
Tlr3
toll-like receptor 3
acts_upstream_of_or_within
ISO
(PMID:19047410)
RGD
PMID:19047410
NCBI chr16:53,554,916...53,572,321
Ensembl chr16:46,822,039...46,836,545
G
Tlr4
toll-like receptor 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:19047410)
Ensembl RGD
PMID:19047410
GO_REF:0000107
NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:80,145,826...80,159,628
G
Tlr9
toll-like receptor 9
acts_upstream_of_or_within
ISO
(PMID:19047410)
RGD
PMID:19047410
NCBI chr 8:115,743,407...115,747,523
Ensembl chr 8:106,864,680...106,868,796
G
Litaf
lipopolysaccharide-induced TNF factor
acts_upstream_of_or_within
ISO
MGI:3687962 (PMID:16954198)
RGD
PMID:16954198
NCBI chr10:5,163,258...5,199,930
Ensembl chr10:4,625,552...4,692,763
G
Ube2j1
ubiquitin-conjugating enzyme E2, J1
acts_upstream_of_or_within
ISO
MGI:109298 (PMID:24020373)
RGD
PMID:24020373
NCBI chr 5:52,218,807...52,237,805
Ensembl chr 5:47,422,587...47,441,461
G
Calhm6
calcium homeostasis modulator family member 6
involved_in
ISO
(PMID:36861806)
RGD
PMID:36861806
NCBI chr20:26,638,721...26,640,466
Ensembl chr20:26,095,592...26,097,278
G
Ccl20
C-C motif chemokine ligand 20
NOT|involved_in
ISO
(PMID:19050256)
RGD
PMID:19050256
NCBI chr 9:91,837,139...91,839,736
Ensembl chr 9:84,388,904...84,391,629
G
Ccr2
C-C motif chemokine receptor 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:28507030)
UniProt RGD
PMID:28507030
GO_REF:0000024
NCBI chr 8:132,611,883...132,619,106
Ensembl chr 8:123,734,430...123,742,100
G
Tnfrsf1b
TNF receptor superfamily member 1B
involved_in
IBA ISO
GO_REF:0000033 (PMID:28052249)
GO_Central RGD
PMID:28052249
GO_REF:0000033
NCBI chr 5:162,356,250...162,387,411
Ensembl chr 5:157,070,642...157,104,206
G
Trpm4
transient receptor potential cation channel, subfamily M, member 4
involved_in
ISO IEA ISS
(PMID:20656926) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:20656926
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:104,918,462...104,949,453
Ensembl chr 1:95,782,000...95,812,532
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all