ONTOLOGY REPORT - ANNOTATIONS |
|
|
Term: | T cell lineage commitment |
|
Accession: | GO:0002360
|
browse the term
|
Definition: | The process in which a lymphoid progenitor cell becomes committed to becoming any type of T cell. |
Synonyms: | exact_synonym: | T-lymphocyte lineage commitment |
|
|
|
G |
Bcl2 |
BCL2, apoptosis regulator |
acts_upstream_of_or_within |
ISO |
MGI:2156165 (PMID:8788039) |
RGD |
PMID:8788039 |
|
NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
|
|
G |
Foxn1 |
forkhead box N1 |
involved_in |
ISO |
(PMID:24184560) |
RGD |
PMID:24184560 |
|
NCBI chr10:63,749,461...63,778,468
Ensembl chr10:63,251,400...63,273,710
|
|
G |
Il7 |
interleukin 7 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857652 (PMID:9252127) |
Ensembl RGD |
PMID:9252127 |
GO_REF:0000107 |
NCBI chr 2:96,142,523...96,186,282
Ensembl chr 2:94,234,766...94,280,075
|
|
G |
Prkdc |
protein kinase, DNA-activated, catalytic subunit |
acts_upstream_of_or_within |
ISO |
MGI:1857113 (PMID:8788039) |
RGD |
PMID:8788039 |
|
NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952
|
|
G |
Rag2 |
recombination activating 2 |
acts_upstream_of_or_within |
ISO |
MGI:1858556 (PMID:8788039) |
RGD |
PMID:8788039 |
|
NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066
|
|
G |
Tp53 |
tumor protein p53 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857590 (PMID:8788039) |
Ensembl RGD |
PMID:8788039 |
GO_REF:0000107 |
NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
|
|
|
G |
Rhoa |
ras homolog family member A |
involved_in |
ISO |
(PMID:25398325) |
RGD |
PMID:25398325 |
|
NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746
|
|
|
G |
Braf |
B-Raf proto-oncogene, serine/threonine kinase |
acts_upstream_of_or_within |
ISO |
MGI:1857579 (PMID:18228248) |
RGD |
PMID:18228248 |
|
NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:68,384,649...68,510,463
|
|
G |
Cyld |
CYLD lysine 63 deubiquitinase |
acts_upstream_of_or_within |
ISO |
MGI:3664438 (PMID:16501569) |
RGD |
PMID:16501569 |
|
NCBI chr19:34,487,491...34,547,311
Ensembl chr19:18,314,019...18,373,658
|
|
G |
Shh |
sonic hedgehog signaling molecule |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:17227833) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:17227833 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170
|
|
|
G |
Ctsl |
cathepsin L |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:9545226) |
UniProt RGD |
PMID:9545226 |
GO_REF:0000024 |
NCBI chr17:770,104...776,266
Ensembl chr17:764,309...770,548
|
|
G |
Tox |
thymocyte selection-associated high mobility group box |
involved_in |
ISO |
(PMID:18195075) |
RGD |
PMID:18195075 |
|
NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272
|
|
|
G |
Tox |
thymocyte selection-associated high mobility group box |
involved_in |
ISO |
(PMID:18195075) |
RGD |
PMID:18195075 |
|
NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272
|
|
|
G |
Bcl2 |
BCL2, apoptosis regulator |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2156165 (PMID:8170972) |
Ensembl RGD |
PMID:8170972 |
GO_REF:0000107 |
NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
|
|
G |
Tox |
thymocyte selection-associated high mobility group box |
involved_in |
ISO |
(PMID:11850626), (PMID:15078895) |
RGD |
PMID:11850626 PMID:15078895 |
|
NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272
|
|
|
G |
Cd69 |
Cd69 molecule |
involved_in |
ISO |
(PMID:24752896) |
RGD |
PMID:24752896 |
|
NCBI chr 4:164,411,485...164,419,403
Ensembl chr 4:162,725,446...162,733,542
|
|
G |
Jak3 |
Janus kinase 3 |
involved_in |
ISO IEA |
(PMID:20696842) GO_REF:0000107 |
RGD Ensembl |
PMID:20696842 |
GO_REF:0000107 |
NCBI chr16:18,418,807...18,432,515
Ensembl chr16:18,386,405...18,398,536
|
|
G |
Lgals1 |
galectin 1 |
involved_in |
ISO IEA |
(PMID:24752896) GO_REF:0000107 |
RGD Ensembl |
PMID:24752896 |
GO_REF:0000107 |
NCBI chr 7:112,365,695...112,368,801
Ensembl chr 7:110,481,392...110,488,345
|
|
G |
Loxl3 |
lysyl oxidase-like 3 |
involved_in |
ISO |
(PMID:28065600) |
RGD |
PMID:28065600 |
|
NCBI chr 4:115,540,640...115,556,958
Ensembl chr 4:115,540,685...115,557,466
|
|
G |
Stat5a |
signal transducer and activator of transcription 5A |
involved_in |
ISO IEA |
(PMID:20696842) GO_REF:0000107 |
RGD Ensembl |
PMID:20696842 |
GO_REF:0000107 |
NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866
|
|
G |
Tbx21 |
T-box transcription factor 21 |
involved_in |
ISO |
(PMID:21151104) |
RGD |
PMID:21151104 |
|
NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831
|
|
G |
Tnfsf18 |
TNF superfamily member 18 |
involved_in |
ISO |
(PMID:24107315) |
RGD |
PMID:24107315 |
|
NCBI chr13:76,366,790...76,440,673
Ensembl chr13:73,831,252...73,843,169
|
|
|
G |
Tox |
thymocyte selection-associated high mobility group box |
involved_in |
ISO |
(PMID:18195075) |
RGD |
PMID:18195075 |
|
NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272
|
|
|
G |
Brd2 |
bromodomain containing 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:28262505) |
UniProt RGD |
PMID:28262505 |
GO_REF:0000024 |
NCBI chr20:4,728,282...4,737,286
Ensembl chr20:4,728,151...4,735,388
|
|
G |
Brd4 |
bromodomain containing 4 |
involved_in |
ISO |
(PMID:28262505) |
RGD |
PMID:28262505 |
|
NCBI chr 7:11,866,997...11,946,575
Ensembl chr 7:11,216,446...11,295,539
|
|
G |
Ep300 |
E1A binding protein p300 |
involved_in |
ISO |
(PMID:28262505) |
RGD |
PMID:28262505 |
|
NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
|
|
G |
Il23a |
interleukin 23 subunit alpha |
involved_in |
IBA ISO |
GO_REF:0000033 (PMID:19501566) |
GO_Central RGD |
PMID:19501566 |
GO_REF:0000033 |
NCBI chr 7:1,306,320...1,308,434
Ensembl chr 7:721,809...723,923
|
|
G |
Opa1 |
OPA1, mitochondrial dynamin like GTPase |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:36171294) |
UniProt Ensembl RGD |
PMID:36171294 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr11:84,612,943...84,690,025
Ensembl chr11:71,109,873...71,185,109
|
|
|
G |
Il4 |
interleukin 4 |
acts_upstream_of_or_within |
ISO |
MGI:103034 (PMID:20706986) |
RGD |
PMID:20706986 |
|
NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750
|
|
G |
Mtor |
mechanistic target of rapamycin kinase |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:26410627) |
Ensembl RGD |
PMID:26410627 |
GO_REF:0000107 |
NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311
|
|
G |
Spn |
sialophorin |
involved_in |
ISO ISS |
(PMID:18036228) GO_REF:0000024 |
RGD UniProt |
PMID:18036228 |
GO_REF:0000024 |
NCBI chr 1:191,177,449...191,190,115
Ensembl chr 1:181,746,429...181,759,628
|
|
G |
Stat6 |
signal transducer and activator of transcription 6 |
acts_upstream_of_or_within |
ISO |
MGI:96556 (PMID:20706986) |
RGD |
PMID:20706986 |
|
NCBI chr 7:65,365,505...65,382,825
Ensembl chr 7:63,479,642...63,498,495
|
|
G |
Tbx21 |
T-box transcription factor 21 |
involved_in |
ISO |
(PMID:10761931) |
RGD |
PMID:10761931 |
|
NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831
|
|
|
G |
Batf |
basic leucine zipper ATF-like transcription factor |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:19578362), (PMID:22983707) |
UniProt RGD |
PMID:19578362 PMID:22983707 |
GO_REF:0000024 |
NCBI chr 6:111,084,717...111,107,052
Ensembl chr 6:105,353,715...105,376,051
|
|
G |
Il6 |
interleukin 6 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:16990136), (PMID:27893700) |
UniProt RGD |
PMID:16990136 PMID:27893700 |
GO_REF:0000024 |
NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178
|
|
G |
Il6r |
interleukin 6 receptor |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:27893700) |
UniProt Ensembl RGD |
PMID:27893700 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 2:177,582,020...177,646,705
Ensembl chr 2:175,298,686...175,347,536
|
|
G |
Irf4 |
interferon regulatory factor 4 |
involved_in |
ISO |
(PMID:22983707) |
RGD |
PMID:22983707 |
|
NCBI chr17:33,930,460...33,948,842
Ensembl chr17:33,721,811...33,740,070
|
|
G |
Ly9 |
lymphocyte antigen 9 |
involved_in |
ISO |
(PMID:22184727) |
RGD |
PMID:22184727 |
|
NCBI chr13:86,610,762...86,633,314
Ensembl chr13:84,079,458...84,100,823
|
|
G |
Otud5 |
OTU deubiquitinase 5 |
acts_upstream_of_or_within |
ISO |
MGI:2386448|MGI:5752247 (PMID:25470037) |
RGD |
PMID:25470037 |
|
NCBI chr X:17,296,750...17,331,257
Ensembl chr X:14,626,164...14,659,573
|
|
G |
Slamf6 |
SLAM family member 6 |
involved_in |
ISO |
(PMID:22184727) |
RGD |
PMID:22184727 |
|
NCBI chr13:86,916,956...86,937,697
Ensembl chr13:84,383,742...84,405,300
|
|
G |
Stat3 |
signal transducer and activator of transcription 3 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:28065600) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:28065600 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:86,311,528...86,363,513
Ensembl chr10:85,811,218...85,863,057
|
|
Term paths to the root
|