ONTOLOGY REPORT - ANNOTATIONS
Term: B cell activation involved in immune response
Accession: GO:0002312
browse the term
Definition: The change in morphology and behavior of a mature or immature B cell during an immune response, resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.
Synonyms: related_synonym: B lymphocyte activation during immune response; B-cell activation during immune response
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ENSRNOG00000065554
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr 5:103,321,196...103,322,285
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Gpr183
G protein-coupled receptor 183
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr15:99,037,764...99,050,550
Ensembl chr15:99,036,367...99,050,559
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Ifna1
interferon, alpha 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:103,097,356...103,097,925
Ensembl chr 5:103,097,356...103,097,925
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Ifna4
interferon, alpha 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:103,069,174...103,070,120
Ensembl chr 5:103,069,483...103,070,052
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Ifna4l1
interferon, alpha 4 like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:103,524,733...103,525,302
Ensembl chr 5:103,524,733...103,525,302
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Ifna5
interferon, alpha 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:103,187,852...103,188,430
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Ifnb1
interferon beta 1
involved_in
ISO IBA
(PMID:12932356) GO_REF:0000033
RGD GO_Central
PMID:12932356
GO_REF:0000033
NCBI chr 5:103,020,758...103,021,595
Ensembl chr 5:103,020,969...103,021,523
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Ifnk
interferon kappa
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:49,732,073...49,734,281
Ensembl chr 5:49,732,073...49,734,281
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LOC120103158
interferon alpha-12-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:103,378,576...103,379,147
Ensembl chr 5:103,378,593...103,379,147
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LOC120103159
interferon alpha-12-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:103,407,135...103,407,884
Ensembl chr 5:103,407,283...103,407,837
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LOC120103160
interferon alpha-12-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:103,426,092...103,427,016
Ensembl chr 5:103,426,387...103,426,941
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LOC120103161
interferon alpha-12-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:103,441,204...103,442,180
Ensembl chr 5:103,441,540...103,442,094
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LOC120103162
interferon alpha-1-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:103,455,380...103,455,934
Ensembl chr 5:103,455,380...103,455,934
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Abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase
acts_upstream_of_or_within
ISO IEA
MGI:1856663|MGI:2153718|MGI:96561 (PMID:11120811), (PMID:7671324), (PMID:8806812) GO_REF:0000107
RGD Ensembl
PMID:7671324 PMID:8806812 PMID:11120811
GO_REF:0000107
NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:14,979,853...15,083,065
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Cd180
CD180 molecule
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:3581654 (PMID:10880523)
GO_Central RGD
PMID:10880523
GO_REF:0000033
NCBI chr 2:33,855,940...33,870,046
Ensembl chr 2:33,855,991...33,899,936
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Cd19
CD19 molecule
involved_in
ISO IEA
(PMID:1373518), (PMID:16672701) GO_REF:0000107 GO_REF:0000002
RGD Ensembl InterPro
PMID:1373518 PMID:16672701
GO_REF:0000002 GO_REF:0000107
NCBI chr 1:180,987,286...180,993,920
Ensembl chr 1:180,987,286...180,993,975
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Gapt
Grb2-binding adaptor protein, transmembrane
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 MGI:3809581 (PMID:18559951)
GO_Central Ensembl RGD
PMID:18559951
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:41,927,533...41,932,120
Ensembl chr 2:41,927,532...41,932,093
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Plcl2
phospholipase C-like 2
acts_upstream_of_or_within
ISO IEA
MGI:2679632 (PMID:14517301) GO_REF:0000107
RGD Ensembl
PMID:14517301
GO_REF:0000107
NCBI chr 9:3,292,564...3,477,009
Ensembl chr 9:3,292,695...3,477,009
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Tlr4
toll-like receptor 4
acts_upstream_of_or_within
ISO IEA
(PMID:10880523) GO_REF:0000107
RGD Ensembl
PMID:10880523
GO_REF:0000107
NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
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Irf8
interferon regulatory factor 8
involved_in
ISO IEA
UniProtKB:P17433 (PMID:31000603) GO_REF:0000107
RGD Ensembl
PMID:31000603
GO_REF:0000107
NCBI chr19:48,790,581...48,812,363
Ensembl chr19:48,790,588...48,811,829
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Muc19
mucin 19, oligomeric
acts_upstream_of_or_within
ISO
(PMID:37475871)
RGD
PMID:37475871
NCBI chr 7:123,017,896...123,139,053
Ensembl chr 7:123,017,896...123,139,053
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Plcg2
phospholipase C, gamma 2
acts_upstream_of_or_within
ISO
MGI:2386100 (PMID:12928432)
RGD
PMID:12928432
NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930
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Spi1
Spi-1 proto-oncogene
involved_in
ISO IEA
UniProtKB:P23611 (PMID:31000603) GO_REF:0000107
RGD Ensembl
PMID:31000603
GO_REF:0000107
NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
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Ada
adenosine deaminase
acts_upstream_of_or_within
ISO IEA
MGI:1857117|MGI:2683027 (PMID:14607964) GO_REF:0000107
RGD Ensembl
PMID:14607964
GO_REF:0000107
NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
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Cdh17
cadherin 17
involved_in
ISO IEA
(PMID:15688343) GO_REF:0000107
RGD Ensembl
PMID:15688343
GO_REF:0000107
NCBI chr 5:25,262,820...25,314,884
Ensembl chr 5:25,262,758...25,314,884
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Il21
interleukin 21
involved_in
ISS ISO
GO_REF:0000024 (PMID:23045607)
UniProt RGD
PMID:23045607
GO_REF:0000024
NCBI chr 2:120,117,105...120,127,012
Ensembl chr 2:120,119,444...120,126,996
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Il6
interleukin 6
involved_in
ISS ISO
GO_REF:0000024 (PMID:23045607)
UniProt RGD
PMID:23045607
GO_REF:0000024
NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178
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Irf8
interferon regulatory factor 8
involved_in
ISO IEA
UniProtKB:P17433 (PMID:31000603) GO_REF:0000107
RGD Ensembl
PMID:31000603
GO_REF:0000107
NCBI chr19:48,790,581...48,812,363
Ensembl chr19:48,790,588...48,811,829
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Itfg2
integrin alpha FG-GAP repeat containing 2
acts_upstream_of_or_within
ISO
MGI:4235940 (PMID:23997217)
RGD
PMID:23997217
NCBI chr 4:161,684,249...161,698,315
Ensembl chr 4:161,684,249...161,698,422
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Phf14
PHD finger protein 14
involved_in
ISO IEA
(PMID:33035772) GO_REF:0000107
RGD Ensembl
PMID:33035772
GO_REF:0000107
NCBI chr 4:40,009,691...40,195,877
Ensembl chr 4:40,009,264...40,195,885
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Pou2af1
POU class 2 homeobox associating factor 1
involved_in
ISO IEA
(PMID:23045607) GO_REF:0000107
RGD Ensembl
PMID:23045607
GO_REF:0000107
NCBI chr 8:51,521,813...51,548,819
Ensembl chr 8:51,474,015...51,548,819
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Spi1
Spi-1 proto-oncogene
involved_in
ISO IEA
UniProtKB:P23611 (PMID:31000603) GO_REF:0000107
RGD Ensembl
PMID:31000603
GO_REF:0000107
NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
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Aicda
activation-induced cytidine deaminase
acts_upstream_of_or_within involved_in
ISO
(PMID:17713479) (PMID:21518874)
RGD
PMID:17713479 PMID:21518874
NCBI chr 4:155,774,132...155,783,972
Ensembl chr 4:155,774,132...155,783,972
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Atad5
ATPase family, AAA domain containing 5
acts_upstream_of
ISO IEA
MGI:4127920 (PMID:25404367) GO_REF:0000107
RGD Ensembl
PMID:25404367
GO_REF:0000107
NCBI chr10:65,070,682...65,118,489
Ensembl chr10:65,070,689...65,117,845
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Batf
basic leucine zipper ATF-like transcription factor
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:20421391), (PMID:21572431)
UniProt Ensembl RGD
PMID:20421391 PMID:21572431
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:105,353,715...105,376,051
Ensembl chr 6:105,353,715...105,376,051
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Cd40lg
CD40 ligand
involved_in
IEA ISO
GO_REF:0000107 (PMID:7529792)
Ensembl RGD
PMID:7529792
GO_REF:0000107
NCBI chr X:135,127,052...135,138,768
Ensembl chr X:135,126,969...135,138,306
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Ercc1
ERCC excision repair 1, endonuclease non-catalytic subunit
acts_upstream_of_or_within
ISO
MGI:2183944 (PMID:15280420)
RGD
PMID:15280420
NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963
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Exo1
exonuclease 1
acts_upstream_of_or_within
ISO IEA
MGI:2653925 (PMID:14716311) GO_REF:0000107
RGD Ensembl
PMID:14716311
GO_REF:0000107
NCBI chr13:87,809,725...87,834,654
Ensembl chr13:87,809,810...87,834,654
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Exosc3
exosome component 3
involved_in
ISO IEA
(PMID:21255825) GO_REF:0000107
RGD Ensembl
PMID:21255825
GO_REF:0000107
NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060
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Exosc6
exosome component 6
involved_in
ISO IEA
(PMID:21255825) GO_REF:0000107
RGD Ensembl
PMID:21255825
GO_REF:0000107
NCBI chr19:39,022,171...39,023,585
Ensembl chr19:39,022,183...39,023,515
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Lig4
DNA ligase 4
acts_upstream_of_or_within
ISO
MGI:1857732 (PMID:17713479)
RGD
PMID:17713479
NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
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Mlh1
mutL homolog 1
acts_upstream_of_or_within
ISO IEA
MGI:1857946 (PMID:12743174) GO_REF:0000107
RGD Ensembl
PMID:12743174
GO_REF:0000107
NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
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Msh2
mutS homolog 2
acts_upstream_of_or_within
ISO IEA
MGI:1857940|MGI:2151801 (PMID:10430621), (PMID:12743174) GO_REF:0000107
RGD Ensembl
PMID:10430621 PMID:12743174
GO_REF:0000107
NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
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Msh6
mutS homolog 6
acts_upstream_of_or_within
ISO IEA
MGI:109352|MGI:3653701 (PMID:16618598), (PMID:17015724) GO_REF:0000107
RGD Ensembl
PMID:16618598 PMID:17015724
GO_REF:0000107
NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956
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Nbn
nibrin
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:15668383) GO_REF:0000107
UniProt RGD Ensembl
PMID:15668383
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150
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Nfkbiz
NFKB inhibitor zeta
involved_in
ISO
MGI:3046930|MGI:5501251 (PMID:25124037), (PMID:31182790)
RGD
PMID:25124037 PMID:31182790
NCBI chr11:44,782,676...44,810,722
Ensembl chr11:44,782,676...44,810,723
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Pcyt1a
phosphate cytidylyltransferase 1A, choline
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:19139091)
UniProt Ensembl RGD
PMID:19139091
GO_REF:0000024 GO_REF:0000107
NCBI chr11:68,313,860...68,357,828
Ensembl chr11:68,313,882...68,357,357
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Rnf168
ring finger protein 168
involved_in
ISS ISO
GO_REF:0000024 (PMID:20080757)
UniProt RGD
PMID:20080757
GO_REF:0000024
NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277
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Rnf8
ring finger protein 8
involved_in
ISS ISO
GO_REF:0000024 (PMID:20080757)
UniProt RGD
PMID:20080757
GO_REF:0000024
NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491
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Sanbr
SANT and BTB domain regulator of CSR
involved_in
ISS IBA ISO IEA
GO_REF:0000024 GO_REF:0000033 (PMID:33831416) GO_REF:0000107
UniProt GO_Central RGD Ensembl
PMID:33831416
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr14:97,516,652...97,585,955
Ensembl chr14:97,516,413...97,581,346
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Swap70
switching B-cell complex subunit SWAP70
acts_upstream_of_or_within
ISO IEA
(PMID:9642267) GO_REF:0000107
RGD Ensembl
PMID:9642267
GO_REF:0000107
NCBI chr 1:164,267,588...164,328,796
Ensembl chr 1:164,267,609...164,328,794
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Ung
uracil-DNA glycosylase
acts_upstream_of_or_within
ISO
MGI:1343961 (PMID:17015724)
RGD
PMID:17015724
NCBI chr12:42,485,276...42,494,217
Ensembl chr12:42,485,276...42,494,206
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Xrcc4
X-ray repair cross complementing 4
acts_upstream_of_or_within
ISO
MGI:1926771|MGI:3047571|MGI:3641440 (PMID:17713479)
RGD
PMID:17713479
NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
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Ccr6
C-C motif chemokine receptor 6
involved_in
ISO IEA
(PMID:27174992) GO_REF:0000107
RGD Ensembl
PMID:27174992
GO_REF:0000107
NCBI chr 1:52,474,477...52,508,301
Ensembl chr 1:52,474,168...52,498,603
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Fdcsp
follicular dendritic cell secreted protein
acts_upstream_of_positive_effect
ISO
MGI:7719862 (PMID:17548624)
RGD
PMID:17548624
NCBI chr14:20,169,691...20,173,983
Ensembl chr14:20,169,691...20,173,983
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Bcl6
BCL6, transcription repressor
acts_upstream_of
ISO IEA
MGI:103034|MGI:2158438 (PMID:10490661) GO_REF:0000107
RGD Ensembl
PMID:10490661
GO_REF:0000107
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
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Fdcsp
follicular dendritic cell secreted protein
acts_upstream_of_or_within_negative_effect
ISO
MGI:7719862 (PMID:17548624)
RGD
PMID:17548624
NCBI chr14:20,169,691...20,173,983
Ensembl chr14:20,169,691...20,173,983
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Foxp3
forkhead box P3
acts_upstream_of
ISO IEA
MGI:3696705 (PMID:16275384) GO_REF:0000107
RGD Ensembl
PMID:16275384
GO_REF:0000107
NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
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Il4
interleukin 4
acts_upstream_of
ISO
(PMID:14988498)
RGD
PMID:14988498
NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750
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Stat6
signal transducer and activator of transcription 6
acts_upstream_of
ISO
MGI:107187 (PMID:10490661)
RGD
PMID:10490661
NCBI chr 7:63,480,229...63,497,551
Ensembl chr 7:63,479,642...63,498,495
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Fdcsp
follicular dendritic cell secreted protein
acts_upstream_of_or_within_negative_effect
ISO
MGI:7719862 (PMID:17548624)
RGD
PMID:17548624
NCBI chr14:20,169,691...20,173,983
Ensembl chr14:20,169,691...20,173,983
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Hspd1
heat shock protein family D (Hsp60) member 1
involved_in
ISO
(PMID:16148103)
RGD
PMID:16148103
NCBI chr 9:64,073,610...64,084,332
Ensembl chr 9:56,579,201...56,589,662
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Il4
interleukin 4
acts_upstream_of
ISO
(PMID:14988498)
RGD
PMID:14988498
NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750
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Adam10
ADAM metallopeptidase domain 10
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 8:71,346,008...71,477,889
Ensembl chr 8:71,345,837...71,477,889
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Bcl3
BCL3, transcription coactivator
acts_upstream_of_or_within
ISO
MGI:1861796 (PMID:9009202)
RGD
PMID:9009202
NCBI chr 1:79,471,368...79,485,908
Ensembl chr 1:79,471,369...79,485,607
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Cdh17
cadherin 17
involved_in
ISO IEA
(PMID:15688343) GO_REF:0000107
RGD Ensembl
PMID:15688343
GO_REF:0000107
NCBI chr 5:25,262,820...25,314,884
Ensembl chr 5:25,262,758...25,314,884
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Dll1
delta like canonical Notch ligand 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:15146182), (PMID:19217325)
UniProt RGD
PMID:15146182 PMID:19217325
GO_REF:0000024
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
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Dock10
dedicator of cytokinesis 10
involved_in
ISO
(PMID:25729399)
RGD
PMID:25729399
NCBI chr 9:81,843,599...82,101,540
Ensembl chr 9:81,843,604...82,101,525
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Dock11
dedicator of cytokinesis 11
involved_in
ISO IEA
(PMID:25729399) GO_REF:0000107
RGD Ensembl
PMID:25729399
GO_REF:0000107
NCBI chr X:115,131,720...115,314,854
Ensembl chr X:115,131,909...115,314,854
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Lfng
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:19217325) GO_REF:0000107
UniProt RGD Ensembl
PMID:19217325
GO_REF:0000024 GO_REF:0000107
NCBI chr12:14,030,551...14,038,996
Ensembl chr12:14,018,333...14,039,008
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Mfng
MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
involved_in
ISO IEA
(PMID:19217325) GO_REF:0000107
RGD Ensembl
PMID:19217325
GO_REF:0000107
NCBI chr 7:110,310,810...110,328,653
Ensembl chr 7:110,310,812...110,328,653
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Notch2
notch receptor 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:19217325) GO_REF:0000107
UniProt RGD Ensembl
PMID:19217325
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
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Ptk2b
protein tyrosine kinase 2 beta
involved_in
ISS ISO
GO_REF:0000024 (PMID:10881171)
UniProt RGD
PMID:10881171
GO_REF:0000024
NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
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Taok3
TAO kinase 3
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr12:39,312,354...39,473,656
Ensembl chr12:39,314,027...39,461,244
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C10h17orf99
similar to human chromosome 17 open reading frame 99
involved_in
ISO IEA
(PMID:28978694) GO_REF:0000107
RGD Ensembl
PMID:28978694
GO_REF:0000107
NCBI chr10:103,015,371...103,027,407
Ensembl chr10:103,016,505...103,027,407
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Gpr183
G protein-coupled receptor 183
involved_in
ISO
(PMID:19597478)
RGD
PMID:19597478
NCBI chr15:99,037,764...99,050,550
Ensembl chr15:99,036,367...99,050,559
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Rag2
recombination activating 2
IMP
RGD
PMID:30206106
RGD:38508903
NCBI chr 3:87,902,373...87,910,227
Ensembl chr 3:87,902,238...87,911,066
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St3gal1
ST3 beta-galactoside alpha-2,3-sialyltransferase 1
involved_in
ISO IEA
(PMID:10755614) GO_REF:0000107
RGD Ensembl
PMID:10755614
GO_REF:0000107
NCBI chr 7:98,845,270...98,913,409
Ensembl chr 7:98,845,270...98,913,236
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Parp3
poly (ADP-ribose) polymerase family, member 3
involved_in
ISO IEA
(PMID:26000965) GO_REF:0000107
RGD Ensembl
PMID:26000965
GO_REF:0000107
NCBI chr 8:107,111,010...107,117,073
Ensembl chr 8:107,111,012...107,116,782
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Fdcsp
follicular dendritic cell secreted protein
involved_in
ISO
MGI:6723808|MGI:7719862 (PMID:24399151)
RGD
PMID:24399151
NCBI chr14:20,169,691...20,173,983
Ensembl chr14:20,169,691...20,173,983
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Bcl6
BCL6, transcription repressor
acts_upstream_of_or_within
ISO IEA
MGI:103034|MGI:2158438 (PMID:10490661) GO_REF:0000107
RGD Ensembl
PMID:10490661
GO_REF:0000107
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
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Foxp3
forkhead box P3
acts_upstream_of_or_within
ISO IEA
MGI:3696705 (PMID:16275384) GO_REF:0000107
RGD Ensembl
PMID:16275384
GO_REF:0000107
NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
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Ndfip1
Nedd4 family interacting protein 1
acts_upstream_of_or_within
ISO IEA
MGI:3695433 (PMID:17137798) GO_REF:0000107
RGD Ensembl
PMID:17137798
GO_REF:0000107
NCBI chr18:30,265,808...30,316,068
Ensembl chr18:30,250,613...30,322,311
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Bcl6
BCL6, transcription repressor
acts_upstream_of_or_within
ISO IEA
MGI:2158439 (PMID:15240705) GO_REF:0000107
RGD Ensembl
PMID:15240705
GO_REF:0000107
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
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Bcl6
BCL6, transcription repressor
acts_upstream_of
ISO IEA
MGI:2158439 (PMID:15240705) GO_REF:0000107
RGD Ensembl
PMID:15240705
GO_REF:0000107
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
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Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
involved_in
ISO
MGI:2385534 (PMID:29259245)
RGD
PMID:29259245
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
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Itm2a
integral membrane protein 2A
acts_upstream_of_or_within
ISO IEA
MGI:5645968 (PMID:24831988) GO_REF:0000107
RGD Ensembl
PMID:24831988
GO_REF:0000107
NCBI chr X:72,486,383...72,492,344
Ensembl chr X:72,486,381...72,492,363
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Lgals1
galectin 1
acts_upstream_of_or_within
ISO IEA
(PMID:21753146) GO_REF:0000107
RGD Ensembl
PMID:21753146
GO_REF:0000107
NCBI chr 7:110,485,239...110,488,345
Ensembl chr 7:110,481,392...110,488,345
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Lgals8
galectin 8
acts_upstream_of_or_within
ISO IEA
(PMID:21753146) GO_REF:0000107
RGD Ensembl
PMID:21753146
GO_REF:0000107
NCBI chr17:58,024,652...58,052,764
Ensembl chr17:58,028,105...58,052,764
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Nfkbiz
NFKB inhibitor zeta
involved_in
ISO
MGI:5501251 (PMID:25124037)
RGD
PMID:25124037
NCBI chr11:44,782,676...44,810,722
Ensembl chr11:44,782,676...44,810,723
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Nkx2-3
NK2 homeobox 3
acts_upstream_of_or_within
ISO IEA
MGI:2448069 (PMID:10926756) GO_REF:0000107
RGD Ensembl
PMID:10926756
GO_REF:0000107
NCBI chr 1:242,478,130...242,481,083
Ensembl chr 1:242,478,130...242,481,083
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Tnfsf4
TNF superfamily member 4
involved_in
ISO IEA
(PMID:12496423) GO_REF:0000107
RGD Ensembl
PMID:12496423
GO_REF:0000107
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
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Exosc3
exosome component 3
acts_upstream_of_or_within
ISO IEA
(PMID:21255825) GO_REF:0000107
RGD Ensembl
PMID:21255825
GO_REF:0000107
NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060
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Exosc6
exosome component 6
acts_upstream_of_or_within
ISO IEA
(PMID:21255825) GO_REF:0000107
RGD Ensembl
PMID:21255825
GO_REF:0000107
NCBI chr19:39,022,171...39,023,585
Ensembl chr19:39,022,183...39,023,515
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Hmces
5-hydroxymethylcytosine binding, ES cell specific
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:31806351)
UniProt Ensembl RGD
PMID:31806351
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616
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Kmt5b
lysine methyltransferase 5B
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:28114273)
UniProt Ensembl RGD
PMID:28114273
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:201,000,444...201,049,819
Ensembl chr 1:201,000,444...201,049,819
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Kmt5c
lysine methyltransferase 5C
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:28114273)
UniProt Ensembl RGD
PMID:28114273
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:69,099,531...69,107,145
Ensembl chr 1:69,099,539...69,107,145
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Mad2l2
mitotic arrest deficient 2 like 2
involved_in
ISO
(PMID:29656893)
RGD
PMID:29656893
NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693
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Paxip1
PAX interacting protein 1
involved_in
ISO
(PMID:20671152)
RGD
PMID:20671152
NCBI chr 4:7,525,132...7,576,659
Ensembl chr 4:7,525,004...7,576,548
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Rif1
replication timing regulatory factor 1
involved_in
ISO IEA
(PMID:23306439), (PMID:23333305), (PMID:23333306) GO_REF:0000107
RGD Ensembl
PMID:23306439 PMID:23333305 PMID:23333306
GO_REF:0000107
NCBI chr 3:36,554,689...36,607,961
Ensembl chr 3:36,554,697...36,603,617
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Shld1
shieldin complex subunit 1
involved_in
ISO IBA
(PMID:29656893) GO_REF:0000033
RGD GO_Central
PMID:29656893
GO_REF:0000033
NCBI chr 3:119,938,695...120,011,068
Ensembl chr 3:119,938,833...120,009,550
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Shld2
shieldin complex subunit 2
involved_in
ISO
(PMID:29656893)
RGD
PMID:29656893
NCBI chr16:9,544,940...9,640,323
Ensembl chr16:9,548,660...9,639,965
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Shld3
shieldin complex subunit 3
involved_in
ISO IEA IBA
(PMID:29656893) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:29656893
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:35,297,255...35,302,071
Ensembl chr 2:35,295,859...35,302,346
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Tfrc
transferrin receptor
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:26642240)
UniProt Ensembl RGD
PMID:26642240
GO_REF:0000024 GO_REF:0000107
NCBI chr11:68,163,413...68,185,257
Ensembl chr11:68,163,413...68,185,257
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Tp53bp1
tumor protein p53 binding protein 1
involved_in
ISO IEA
(PMID:23345425), (PMID:23760478) GO_REF:0000107 (PMID:15077110), (PMID:15159415)
RGD Ensembl
PMID:15077110 PMID:15159415 PMID:23345425 PMID:23760478
GO_REF:0000107
NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822
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Mlh1
mutL homolog 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:10430621)
Ensembl RGD
PMID:10430621
GO_REF:0000107
NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
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Msh2
mutS homolog 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:10430621)
Ensembl RGD
PMID:10430621
GO_REF:0000107
NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
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Nsd2
nuclear receptor binding SET domain protein 2
acts_upstream_of_or_within
ISO IEA
(PMID:23241889) GO_REF:0000107
RGD Ensembl
PMID:23241889
GO_REF:0000107
NCBI chr14:76,833,179...76,911,304
Ensembl chr14:76,835,637...76,913,641
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Pms2
PMS1 homolog 2, mismatch repair system component
involved_in
ISO IEA
UniProtKB:Q9JK91 (PMID:10430621) GO_REF:0000107
RGD Ensembl
PMID:10430621
GO_REF:0000107
NCBI chr12:10,676,818...10,701,161
Ensembl chr12:10,676,764...10,701,066
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Tgfb1
transforming growth factor, beta 1
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:14988498)
AgBase Ensembl RGD
PMID:14988498
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
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Tnfsf13
TNF superfamily member 13
acts_upstream_of_or_within involved_in
ISO IBA
(PMID:14988498) MGI:3038886 (PMID:14988498) GO_REF:0000033
RGD GO_Central
PMID:14988498
GO_REF:0000033
NCBI chr10:54,400,054...54,403,723
Ensembl chr10:54,400,065...54,403,042
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Clcf1
cardiotrophin-like cytokine factor 1
involved_in
ISO
(PMID:12023368)
RGD
PMID:12023368
NCBI chr 1:210,937,763...210,947,064
Ensembl chr 1:201,507,859...201,517,605
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Il4
interleukin 4
acts_upstream_of_or_within
ISO
(PMID:14988498)
RGD
PMID:14988498
NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750
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Stat6
signal transducer and activator of transcription 6
acts_upstream_of_or_within
ISO
MGI:107187 (PMID:10490661)
RGD
PMID:10490661
NCBI chr 7:63,480,229...63,497,551
Ensembl chr 7:63,479,642...63,498,495
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Atad5
ATPase family, AAA domain containing 5
acts_upstream_of_or_within
ISO IEA
MGI:4127920 (PMID:25404367) GO_REF:0000107
RGD Ensembl
PMID:25404367
GO_REF:0000107
NCBI chr10:65,070,682...65,118,489
Ensembl chr10:65,070,689...65,117,845
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Cd28
Cd28 molecule
acts_upstream_of_or_within
ISO
MGI:1857150 (PMID:7688139)
RGD
PMID:7688139
NCBI chr 9:62,166,324...62,194,674
Ensembl chr 9:62,166,192...62,194,685
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Cd40
CD40 molecule
acts_upstream_of_or_within
ISO
(PMID:12882831)
RGD
PMID:12882831
NCBI chr 3:153,790,372...153,805,279
Ensembl chr 3:153,790,449...153,805,534
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Ifng
interferon gamma
acts_upstream_of_or_within
ISO
(PMID:12882831)
RGD
PMID:12882831
NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:53,903,337...53,907,375
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Il2
interleukin 2
acts_upstream_of_or_within
ISO
MGI:1857191 (PMID:1830926)
RGD
PMID:1830926
NCBI chr 2:121,932,968...121,937,672
Ensembl chr 2:120,004,862...120,009,566
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Il4
interleukin 4
acts_upstream_of_or_within
ISO
(PMID:12882831), (PMID:14988498)
RGD
PMID:12882831 PMID:14988498
NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750
G
Mlh1
mutL homolog 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:10430621)
Ensembl RGD
PMID:10430621
GO_REF:0000107
NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
G
Msh2
mutS homolog 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:10430621)
Ensembl RGD
PMID:10430621
GO_REF:0000107
NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
G
Pagr1
Paxip1-associated glutamate-rich protein 1
involved_in
ISO
(PMID:26744420)
RGD
PMID:26744420
NCBI chr 1:181,622,698...181,625,024
G
Paxip1
PAX interacting protein 1
involved_in
ISO
(PMID:26744420)
RGD
PMID:26744420
NCBI chr 4:7,525,132...7,576,659
Ensembl chr 4:7,525,004...7,576,548
G
Pms2
PMS1 homolog 2, mismatch repair system component
involved_in
ISO IEA
UniProtKB:Q9JK91 (PMID:10430621) GO_REF:0000107
RGD Ensembl
PMID:10430621
GO_REF:0000107
NCBI chr12:10,676,818...10,701,161
Ensembl chr12:10,676,764...10,701,066
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Ptprc
protein tyrosine phosphatase, receptor type, C
acts_upstream_of_or_within
ISO
MGI:2181288 (PMID:9015183)
RGD
PMID:9015183
NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692
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Tbx21
T-box transcription factor 21
acts_upstream_of_or_within
ISO IEA
MGI:2180194 (PMID:12882831) GO_REF:0000107
RGD Ensembl
PMID:12882831
GO_REF:0000107
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
G
Ddrgk1
DDRGK domain containing 1
involved_in
ISO IEA
(PMID:30842412) GO_REF:0000107
RGD Ensembl
PMID:30842412
GO_REF:0000107
NCBI chr 3:117,861,916...117,882,680
Ensembl chr 3:117,861,653...117,882,680
G
Il10
interleukin 10
acts_upstream_of
ISO IEA
UniProtKB:P60568 (PMID:22962438) GO_REF:0000107
RGD Ensembl
PMID:22962438
GO_REF:0000107
NCBI chr13:45,024,921...45,029,586
Ensembl chr13:42,472,839...42,477,313
G
Il2
interleukin 2
acts_upstream_of
ISO IEA
UniProtKB:P22301 (PMID:22962438) GO_REF:0000107
RGD Ensembl
PMID:22962438
GO_REF:0000107
NCBI chr 2:121,932,968...121,937,672
Ensembl chr 2:120,004,862...120,009,566
G
Xbp1
X-box binding protein 1
involved_in
ISO IEA ISS
(PMID:11460154) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:11460154
GO_REF:0000024 GO_REF:0000107
NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
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Aplf
aprataxin and PNKP like factor
acts_upstream_of_or_within
ISO IEA
MGI:4128102 (PMID:21211721) GO_REF:0000107
RGD Ensembl
PMID:21211721
GO_REF:0000107
NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633
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Mir181b1
microRNA 181b-1
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr13:49,485,688...49,485,797
Ensembl chr13:49,485,688...49,485,797
G
Mir181b2
microRNA 181b-2
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 3:22,616,948...22,617,035
Ensembl chr 3:22,616,948...22,617,035
G
Supt6h
SPT6 homolog, histone chaperone and transcription elongation factor
involved_in
ISO IEA
(PMID:21518874) GO_REF:0000107
RGD Ensembl
PMID:21518874
GO_REF:0000107
NCBI chr10:63,103,920...63,140,780
Ensembl chr10:63,103,921...63,140,780
G
Foxp3
forkhead box P3
acts_upstream_of_or_within
ISO IEA
MGI:3696705 (PMID:16275384) GO_REF:0000107
RGD Ensembl
PMID:16275384
GO_REF:0000107
NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
G
Il27ra
interleukin 27 receptor subunit alpha
acts_upstream_of_or_within
ISO IEA
MGI:3525439 (PMID:11057672) GO_REF:0000107
RGD Ensembl
PMID:11057672
GO_REF:0000107
NCBI chr19:24,109,963...24,121,977
Ensembl chr19:24,109,972...24,121,938
G
Ndfip1
Nedd4 family interacting protein 1
acts_upstream_of_or_within
ISO IEA
MGI:3695433 (PMID:17137798) GO_REF:0000107
RGD Ensembl
PMID:17137798
GO_REF:0000107
NCBI chr18:30,265,808...30,316,068
Ensembl chr18:30,250,613...30,322,311
G
Slc15a4
solute carrier family 15 member 4
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:25310967) GO_REF:0000024
Ensembl RGD UniProt
PMID:25310967
GO_REF:0000024 GO_REF:0000107
NCBI chr12:29,048,634...29,082,480
Ensembl chr12:29,063,015...29,082,480
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all