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ONTOLOGY REPORT - ANNOTATIONS

Term:organ or tissue specific immune response
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Accession:GO:0002251 term browser browse the term
Definition:An immune response taking place in an organ or tissues such as the liver, brain, mucosa, or nervous system tissues.
Synonyms:exact_synonym: immune response in organ or tissue


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organ or tissue specific immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFH complement factor H acts_upstream_of_or_within ISO (PMID:20702729) MGI PMID:20702729
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24218451) Ensembl
MGI		 PMID:24218451 GO_REF:0000107 NCBI chr13:31,177,604...31,180,764
Ensembl chr13:31,179,291...31,180,747 		JBrowse link
G UMOD uromodulin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28990932) Ensembl
MGI		 PMID:28990932 GO_REF:0000107 NCBI chr 3:25,473,048...25,492,286
Ensembl chr 3:25,473,162...25,492,278 		JBrowse link
antigen transcytosis by M cells in mucosal-associated lymphoid tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GP2 glycoprotein 2 acts_upstream_of_or_within ISO (PMID:19907495) MGI PMID:19907495 NCBI chr 3:25,496,533...25,518,210
Ensembl chr 3:25,497,292...25,517,096 		JBrowse link
hepatic immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL6 interleukin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:91,506,421...91,510,830
Ensembl chr 9:91,506,421...91,511,263 		JBrowse link
immune response in brain or nervous system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24218451) Ensembl
MGI		 PMID:24218451 GO_REF:0000107 NCBI chr13:31,177,604...31,180,764
Ensembl chr13:31,179,291...31,180,747 		JBrowse link
immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIGR polymeric immunoglobulin receptor involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:67,553,094...67,574,698
Ensembl chr 9:67,553,099...67,574,668 		JBrowse link
G RAB17 RAB17, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:137,232,781...137,255,884
Ensembl chr15:137,235,936...137,261,057 		JBrowse link
innate immune response in mucosa term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA4 apolipoprotein A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:44,201,587...44,204,072
Ensembl chr 9:44,201,508...44,204,206 		JBrowse link
G BPIFB1 BPI fold containing family B member 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr17:36,782,307...36,809,756
Ensembl chr17:36,782,307...36,809,754 		JBrowse link
G CLDN2 claudin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:87,352,695...87,355,724
Ensembl chr  X:87,321,152...87,355,721 		JBrowse link
G DEFB1 defensin beta 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107
G FAU FAU ubiquitin like and ribosomal protein S30 fusion involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 2:7,070,903...7,072,811
Ensembl chr 2:7,070,906...7,072,809 		JBrowse link
G H2BC10 H2B clustered histone 10 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 7:20,907,083...20,908,336
Ensembl chr 7:20,907,099...20,908,327 		JBrowse link
G H2BC11 H2B clustered histone 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:21,219,729...21,220,563
Ensembl chr 7:21,220,123...21,220,503 		JBrowse link
G H2BC12 H2B clustered histone 12 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 7:21,225,807...21,226,322
Ensembl chr 7:21,225,879...21,226,259 		JBrowse link
G H2BC13 H2B clustered histone 13 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 7:21,582,043...21,582,522 JBrowse link
G H2BC15 H2B clustered histone 15 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 7:21,606,754...21,610,955 JBrowse link
G H2BC16 H2B clustered histone 16 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 7:21,620,204...21,620,664 JBrowse link
G H2BC18 H2B clustered histone 18 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 4:99,216,737...99,219,700
Ensembl chr 4:99,216,452...99,219,698 		JBrowse link
G H2BC2 H2B clustered histone 2 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 7:20,467,395...20,471,314 JBrowse link
G H2BC21 H2B clustered histone 21 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 4:99,169,471...99,171,665
Ensembl chr 4:99,169,485...99,186,310 		JBrowse link
G H2BC26 H2B clustered histone 26 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 2:51,687,852...51,694,237
Ensembl chr 2:51,687,842...51,694,212 		JBrowse link
G H2BC3 H2B clustered histone 3 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 7:20,735,437...20,736,010 JBrowse link
G H2BC5 H2B clustered histone 5 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 7:20,821,090...20,829,491
Ensembl chr 7:20,821,091...20,829,493 		JBrowse link
G IL4 interleukin 4 involved_in ISO (PMID:9973465) BHF-UCL PMID:9973465 NCBI chr 2:134,986,817...134,994,365
Ensembl chr 2:134,986,817...134,994,365 		JBrowse link
G LOC102163838 non-secretory ribonuclease-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:78,179,285...78,180,221 JBrowse link
G LTF lactotransferrin involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:29,413,886...29,445,751
Ensembl chr13:29,413,886...29,445,739 		JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15692051) Ensembl
MGI		 PMID:15692051 GO_REF:0000107 NCBI chr 6:34,132,127...34,167,446
Ensembl chr 6:34,130,938...34,177,534 		JBrowse link
G NPG4 protegrin 4 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr13:30,932,411...30,934,626
Ensembl chr13:30,932,232...30,987,873 		JBrowse link
G PLA2G1B phospholipase A2 group IB involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:40,314,520...40,322,315
Ensembl chr14:40,314,520...40,322,315 		JBrowse link
G RPL39 ribosomal protein L39 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr  X:98,178,148...98,181,439
Ensembl chr  X:98,178,155...98,181,598 		JBrowse link
mucosal immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD160 CD160 molecule involved_in ISO (PMID:22801499) UniProt PMID:22801499 NCBI chr 4:99,579,891...99,585,808 JBrowse link
G EPG5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:26764600) MGI
Ensembl		 PMID:26764600 GO_REF:0000107 NCBI chr 1:95,493,779...95,616,794
Ensembl chr 1:95,498,720...95,616,755 		JBrowse link
G FFAR2 free fatty acid receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:44,899,879...44,904,461
Ensembl chr 6:44,901,159...44,904,459 		JBrowse link
G FFAR3 free fatty acid receptor 3 involved_in ISO (PMID:23665276) UniProt PMID:23665276 NCBI chr 6:44,844,149...44,845,172 JBrowse link
G IFNLR1 interferon lambda receptor 1 involved_in ISO (PMID:21518880) UniProt PMID:21518880 NCBI chr 6:81,893,997...81,914,104
Ensembl chr 6:81,894,642...81,914,071 		JBrowse link
G LOC110255217 interferon lambda-3-like involved_in ISO (PMID:21518880) UniProt PMID:21518880 NCBI chr 6:47,939,706...47,941,254 JBrowse link
G OTUD7B OTU deubiquitinase 7B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:99,054,426...99,111,649
Ensembl chr 4:99,054,426...99,114,162 		JBrowse link
positive regulation of immunoglobulin production in mucosal tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XCL1 chemokine (C motif) ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:82,432,845...82,436,150
Ensembl chr 4:82,432,204...82,436,180 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18943
    response to stimulus 10120
      immune response 1700
        organ or tissue specific immune response 39
          hepatic immune response 1
          immune response in brain or nervous system 1
          mucosal immune response + 35
paths to the root