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ONTOLOGY REPORT - ANNOTATIONS

Term:organ or tissue specific immune response
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Accession:GO:0002251 term browser browse the term
Definition:An immune response taking place in an organ or tissues such as the liver, brain, mucosa, or nervous system tissues.
Synonyms:exact_synonym: immune response in organ or tissue


show annotations for term's descendants           Sort by:
organ or tissue specific immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfh complement component factor h acts_upstream_of_or_within IGI (PMID:20702729) MGI PMID:20702729 NCBI chr 1:140,013,593...140,111,149
Ensembl chr 1:140,012,446...140,111,502 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within IMP (PMID:24218451) MGI PMID:24218451 NCBI chr 9:108,887,000...108,888,791
Ensembl chr 9:108,887,001...108,888,802 		JBrowse link
G Umod uromodulin acts_upstream_of_or_within IMP (PMID:28990932) MGI PMID:28990932 NCBI chr 7:119,061,931...119,078,485
Ensembl chr 7:119,061,934...119,078,505 		JBrowse link
antigen transcytosis by M cells in mucosal-associated lymphoid tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gp2 glycoprotein 2 zymogen granule membrane acts_upstream_of_or_within IDA
IMP		 (PMID:19907495) MGI PMID:19907495 NCBI chr 7:119,041,760...119,058,495
Ensembl chr 7:119,041,760...119,058,508 		JBrowse link
hepatic immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il6 interleukin 6 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 5:30,218,112...30,224,973
Ensembl chr 5:30,218,112...30,224,979 		JBrowse link
immune response in brain or nervous system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within IMP (PMID:24218451) MGI PMID:24218451 NCBI chr 9:108,887,000...108,888,791
Ensembl chr 9:108,887,001...108,888,802 		JBrowse link
immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pigr polymeric immunoglobulin receptor involved_in ISO
IBA
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 NCBI chr 1:130,754,421...130,779,986
Ensembl chr 1:130,754,421...130,779,986 		JBrowse link
G Rab17 RAB17, member RAS oncogene family involved_in IMP (PMID:9624171) UniProt PMID:9624171 NCBI chr 1:90,885,855...90,897,395
Ensembl chr 1:90,885,855...90,897,383 		JBrowse link
innate immune response in mucosa term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa4 apolipoprotein A-IV involved_in ISO
IMP		 (PMID:15254593) GO_Central
BHF-UCL		 PMID:15254593 GO_REF:0000119 NCBI chr 9:46,152,142...46,154,756
Ensembl chr 9:46,151,994...46,154,757 		JBrowse link
G AY761185 cDNA sequence AY761185 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:21,433,710...21,434,764
Ensembl chr 8:21,433,710...21,434,726 		JBrowse link
G Bpifb1 BPI fold containing family B, member 1 involved_in IBA
ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr 2:154,032,738...154,062,263
Ensembl chr 2:154,032,738...154,062,289 		JBrowse link
G Camp cathelicidin antimicrobial peptide involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 9:109,676,445...109,678,524
Ensembl chr 9:109,676,447...109,678,685 		JBrowse link
G Cldn2 claudin 2 involved_in IMP (PMID:28618266) UniProt PMID:28618266 NCBI chr  X:138,701,552...138,712,135
Ensembl chr  X:138,701,577...138,712,135 		JBrowse link
G Defa-rs10 defensin, alpha, related sequence 10 involved_in IBA GO_Central GO_REF:0000033
G Defa-rs12 defensin, alpha, related sequence 12 involved_in IBA GO_Central GO_REF:0000033
G Defa-rs2 defensin, alpha, related sequence 2 involved_in IBA GO_Central GO_REF:0000033
G Defa1 defensin, alpha 1 involved_in IBA GO_Central GO_REF:0000033
G Defa10 defensin, alpha, 10 involved_in IBA GO_Central GO_REF:0000033
G Defa11 defensin, alpha, 11 involved_in IBA GO_Central GO_REF:0000033
G Defa13 defensin, alpha, 13 involved_in IBA GO_Central GO_REF:0000033
G Defa14 defensin, alpha, 14 involved_in IBA GO_Central GO_REF:0000033
G Defa15 defensin, alpha, 15 involved_in IBA GO_Central GO_REF:0000033
G Defa16 defensin, alpha, 16 involved_in IBA GO_Central GO_REF:0000033
G Defa17 defensin, alpha, 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:22,145,783...22,146,752
Ensembl chr 8:22,145,796...22,146,751 		JBrowse link
G Defa2 defensin, alpha, 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:21,868,533...21,869,511
Ensembl chr 8:21,868,531...21,869,511 		JBrowse link
G Defa20 defensin, alpha, 20 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:21,999,274...22,000,253
Ensembl chr 8:21,999,274...22,000,253 		JBrowse link
G Defa21 defensin, alpha, 21 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:21,515,561...21,516,533
Ensembl chr 8:21,515,561...21,516,532 		JBrowse link
G Defa22 defensin, alpha, 22 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:21,652,293...21,653,265
Ensembl chr 8:21,652,293...21,653,265 		JBrowse link
G Defa23 defensin, alpha, 23 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:21,545,056...21,546,032
Ensembl chr 8:21,545,063...21,546,032 		JBrowse link
G Defa24 defensin, alpha, 24 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:22,224,510...22,225,487
Ensembl chr 8:22,224,510...22,225,487 		JBrowse link
G Defa25 defensin, alpha, 25 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:21,574,412...21,575,396
Ensembl chr 8:21,574,458...21,575,301 		JBrowse link
G Defa26 defensin, alpha, 26 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:22,108,184...22,108,988
Ensembl chr 8:22,108,199...22,108,988 		JBrowse link
G Defa28 defensin, alpha, 28 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:22,072,976...22,073,883
Ensembl chr 8:22,073,022...22,073,977 		JBrowse link
G Defa29 defensin, alpha, 29 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:21,815,904...21,817,034
Ensembl chr 8:21,815,903...21,817,036 		JBrowse link
G Defa3 defensin, alpha, 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:21,777,425...21,778,393
Ensembl chr 8:21,777,425...21,778,393 		JBrowse link
G Defa30 defensin, alpha, 30 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:21,624,634...21,625,614
Ensembl chr 8:21,624,658...21,625,614 		JBrowse link
G Defa31 defensin, alpha, 31 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:21,681,589...21,682,566
Ensembl chr 8:21,681,630...21,682,565 		JBrowse link
G Defa34 defensin, alpha, 34 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:22,155,813...22,156,749
Ensembl chr 8:22,155,813...22,156,748 		JBrowse link
G Defa35 defensin, alpha, 35 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:21,555,054...21,556,017
Ensembl chr 8:21,555,054...21,556,012 		JBrowse link
G Defa37 defensin, alpha, 37 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:22,055,402...22,056,366
Ensembl chr 8:22,055,402...22,056,365 		JBrowse link
G Defa38 defensin, alpha, 38 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:21,584,987...21,586,111
Ensembl chr 8:21,585,090...21,586,066 		JBrowse link
G Defa39 defensin, alpha, 39 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:22,192,540...22,193,663
Ensembl chr 8:22,192,535...22,193,661 		JBrowse link
G Defa4 defensin, alpha, 4 involved_in IBA GO_Central GO_REF:0000033
G Defa40 defensin, alpha, 40 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:21,739,731...21,740,569
Ensembl chr 8:21,739,770...21,740,572 		JBrowse link
G Defa41 defensin, alpha, 41 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:21,691,620...21,692,462
Ensembl chr 8:21,691,577...21,692,555 		JBrowse link
G Defa42 defensin, alpha, 42 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:21,945,443...21,946,533
Ensembl chr 8:21,945,461...21,946,576 		JBrowse link
G Defa5 defensin, alpha, 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:21,787,410...21,788,391
Ensembl chr 8:21,787,455...21,788,391 		JBrowse link
G Defa6 defensin, alpha, 6 involved_in IBA GO_Central GO_REF:0000033
G Defa7 defensin, alpha, 7 involved_in IBA GO_Central GO_REF:0000033
G Defa8 defensin, alpha, 8 involved_in IBA GO_Central GO_REF:0000033
G Defa9 defensin, alpha, 9 involved_in IBA GO_Central GO_REF:0000033
G Defb1 defensin beta 1 involved_in IBA
ISO		 GO_Central GO_REF:0000033 GO_REF:0000119 NCBI chr 8:22,266,571...22,285,201
Ensembl chr 8:22,266,615...22,285,201 		JBrowse link
G Defb10 defensin beta 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:22,348,917...22,352,027
Ensembl chr 8:22,348,917...22,352,027 		JBrowse link
G Defb11 defensin beta 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:22,395,383...22,396,448
Ensembl chr 8:22,395,392...22,396,428 		JBrowse link
G Defb2 defensin beta 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:22,329,942...22,333,519
Ensembl chr 8:22,329,942...22,333,498 		JBrowse link
G Defb37 defensin beta 37 involved_in IBA
ISO		 GO_Central GO_REF:0000033 GO_REF:0000119 NCBI chr 8:19,036,266...19,041,072
Ensembl chr 8:19,036,249...19,041,071 		JBrowse link
G Defb38 defensin beta 38 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:19,073,420...19,076,584
Ensembl chr 8:19,073,423...19,076,582 		JBrowse link
G Defb39 defensin beta 39 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:19,102,841...19,114,937
Ensembl chr 8:19,102,842...19,114,826 		JBrowse link
G Defb40 defensin beta 40 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:19,024,930...19,028,237
Ensembl chr 8:19,024,956...19,028,272 		JBrowse link
G Defb9 defensin beta 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:22,371,729...22,375,458
Ensembl chr 8:22,371,729...22,375,437 		JBrowse link
G Ear1 eosinophil-associated, ribonuclease A family, member 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:44,056,222...44,057,096
Ensembl chr14:44,056,222...44,112,974 		JBrowse link
G Ear10 eosinophil-associated, ribonuclease A family, member 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:44,160,355...44,161,053
Ensembl chr14:44,160,177...44,161,016 		JBrowse link
G Ear14 eosinophil-associated, ribonuclease A family, member 14 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:51,441,152...51,441,613
Ensembl chr14:51,440,848...51,441,795 		JBrowse link
G Ear2 eosinophil-associated, ribonuclease A family, member 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:44,340,111...44,340,988
Ensembl chr14:44,340,111...44,340,991 		JBrowse link
G Ear3 eosinophil-associated, ribonuclease A family, member 3 involved_in IBA GO_Central GO_REF:0000033
G Ear4 eosinophil-associated, ribonuclease A family, member 4 involved_in IBA GO_Central GO_REF:0000033
G Ear6 eosinophil-associated, ribonuclease A family, member 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:52,091,225...52,092,100
Ensembl chr14:52,091,156...52,092,100 		JBrowse link
G Fau FAU ubiquitin like and ribosomal protein S30 fusion involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr19:6,107,977...6,109,554
Ensembl chr19:6,107,874...6,109,554 		JBrowse link
G H2bc12 H2B clustered histone 12 involved_in ISO GO_Central GO_REF:0000119 NCBI chr13:22,219,991...22,220,490
Ensembl chr13:22,220,040...22,220,515 		JBrowse link
G H2bc14 H2B clustered histone 14 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr13:21,906,214...21,906,696
Ensembl chr13:21,906,214...21,906,737 		JBrowse link
G H2bc15 H2B clustered histone 15 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr13:21,938,246...21,938,723
Ensembl chr13:21,938,293...21,938,673 		JBrowse link
G H2bc18 H2B clustered histone 18 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 3:96,177,016...96,177,508
Ensembl chr 3:96,177,068...96,177,448 		JBrowse link
G H2bc21 H2B clustered histone 21 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 3:96,128,435...96,131,057
Ensembl chr 3:96,128,435...96,131,054 		JBrowse link
G H2bc22 H2B clustered histone 22 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr13:21,971,652...21,985,731
Ensembl chr13:21,971,631...21,973,383 		JBrowse link
G H2bc26 H2B clustered histone 26 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr11:58,842,961...58,845,278
Ensembl chr11:58,844,874...58,845,254 		JBrowse link
G H2bc3 H2B clustered histone 3 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr13:23,930,717...23,931,206
Ensembl chr13:23,930,717...23,931,224 		JBrowse link
G H2bc4 H2B clustered histone 4 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr13:23,868,182...23,876,805
Ensembl chr13:23,868,182...23,876,891 		JBrowse link
G H2bc6 H2B clustered histone 6 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr13:23,767,653...23,805,091
Ensembl chr13:23,767,653...23,805,107 		JBrowse link
G H2bc7 H2B clustered histone 7 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr13:23,757,934...23,758,381
Ensembl chr13:23,757,910...23,758,370 		JBrowse link
G H2bc8 H2B clustered histone 8 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr13:23,755,574...23,756,037
Ensembl chr13:23,755,570...23,756,187 		JBrowse link
G H2bc9 H2B clustered histone 9 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr13:23,727,093...23,727,614
Ensembl chr13:23,725,884...23,727,562 		JBrowse link
G Il4 interleukin 4 involved_in IDA (PMID:9973465) BHF-UCL PMID:9973465 NCBI chr11:53,503,287...53,509,492
Ensembl chr11:53,493,809...53,509,496 		JBrowse link
G Ltf lactotransferrin involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr 9:110,848,360...110,871,834
Ensembl chr 9:110,848,339...110,871,835 		JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within IMP (PMID:15692051) MGI PMID:15692051 NCBI chr 8:89,373,943...89,415,103
Ensembl chr 8:89,373,943...89,415,102 		JBrowse link
G Pla2g1b phospholipase A2, group IB, pancreas involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 5:115,604,201...115,612,781
Ensembl chr 5:115,604,321...115,612,781 		JBrowse link
G Rnase2a ribonuclease, RNase A family, 2A (liver, eosinophil-derived neurotoxin) involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:51,492,718...51,493,569
Ensembl chr14:51,492,719...51,493,569 		JBrowse link
G Rnase2b ribonuclease, RNase A family, 2B (liver, eosinophil-derived neurotoxin) involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:51,399,717...51,400,475
Ensembl chr14:51,399,717...51,400,475 		JBrowse link
G Rpl39 ribosomal protein L39 involved_in ISO GO_Central GO_REF:0000119 NCBI chr  X:36,346,169...36,348,852
Ensembl chr  X:36,346,173...36,349,055 		JBrowse link
mucosal immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd160 CD160 antigen involved_in IDA (PMID:22801499) UniProt PMID:22801499 NCBI chr 3:96,706,079...96,736,667
Ensembl chr 3:96,706,079...96,736,667 		JBrowse link
G Epg5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_or_within IMP (PMID:26764600) MGI PMID:26764600 NCBI chr18:77,981,618...78,080,539
Ensembl chr18:77,981,680...78,078,228 		JBrowse link
G Fdcsp follicular dendritic cell secreted protein involved_in IMP (PMID:24399151) MGI PMID:24399151 NCBI chr 5:88,056,638...88,062,030
Ensembl chr 5:88,056,638...88,062,030 		JBrowse link
G Ffar2 free fatty acid receptor 2 involved_in IMP (PMID:23665276) UniProt PMID:23665276 NCBI chr 7:30,517,778...30,523,200
Ensembl chr 7:30,517,773...30,523,200 		JBrowse link
G Ffar3 free fatty acid receptor 3 involved_in IMP (PMID:23665276) UniProt PMID:23665276 NCBI chr 7:30,553,755...30,555,603
Ensembl chr 7:30,553,755...30,555,603 		JBrowse link
G Ifnl2 interferon lambda 2 involved_in IDA (PMID:21518880) UniProt PMID:21518880 NCBI chr 7:28,208,209...28,209,957
Ensembl chr 7:28,208,261...28,209,880 		JBrowse link
G Ifnlr1 interferon lambda receptor 1 involved_in IMP (PMID:21518880) UniProt PMID:21518880 NCBI chr 4:135,413,513...135,435,492
Ensembl chr 4:135,413,598...135,435,492 		JBrowse link
G Igha immunoglobulin heavy constant alpha acts_upstream_of_or_within IDA (PMID:14988498) MGI PMID:14988498 NCBI chr12:113,219,824...113,223,856
Ensembl chr12:113,218,450...113,223,856 		JBrowse link
G Otud7b OTU domain containing 7B involved_in IMP (PMID:23334419) UniProt PMID:23334419 NCBI chr 3:96,011,759...96,068,446
Ensembl chr 3:96,011,839...96,068,446 		JBrowse link
positive regulation of immunoglobulin production in mucosal tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 6030468B19Rik RIKEN cDNA 6030468B19 gene involved_in IMP (PMID:28978694) UniProt PMID:28978694 NCBI chr11:117,688,460...117,698,134
Ensembl chr11:117,688,486...117,698,127 		JBrowse link
G Xcl1 chemokine (C motif) ligand 1 involved_in IDA (PMID:9973465) BHF-UCL PMID:9973465 NCBI chr 1:164,759,216...164,763,094
Ensembl chr 1:164,759,213...164,763,096 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28628
    response to stimulus 10994
      immune response 2230
        organ or tissue specific immune response 98
          hepatic immune response 1
          immune response in brain or nervous system 1
          mucosal immune response + 94
paths to the root