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ONTOLOGY REPORT - ANNOTATIONS

Term:organ or tissue specific immune response
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Accession:GO:0002251 term browser browse the term
Definition:An immune response taking place in an organ or tissues such as the liver, brain, mucosa, or nervous system tissues.
Synonyms:exact_synonym: immune response in organ or tissue


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organ or tissue specific immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFH complement factor H acts_upstream_of_or_within ISO (PMID:20702729) MGI PMID:20702729 NCBI chr 1:196,652,043...196,747,504
Ensembl chr 1:196,651,754...196,752,476 		JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645 		JBrowse link
G UMOD uromodulin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:20,333,051...20,356,301
Ensembl chr16:20,333,051...20,356,301 		JBrowse link
antigen transcytosis by M cells in mucosal-associated lymphoid tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GP2 glycoprotein 2 acts_upstream_of_or_within ISS UniProt GO_REF:0000024 NCBI chr16:20,309,574...20,327,513
Ensembl chr16:20,309,574...20,327,808 		JBrowse link
hepatic immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL6 interleukin 6 involved_in IDA
TAS		 (PMID:2444978)
(PMID:12832423)		 BHF-UCL PMID:2444978 PMID:12832423 NCBI chr 7:22,727,200...22,731,998
Ensembl chr 7:22,725,884...22,732,002 		JBrowse link
G IL6R interleukin 6 receptor involved_in TAS (PMID:12832423) BHF-UCL PMID:12832423 NCBI chr 1:154,405,343...154,469,450
Ensembl chr 1:154,405,193...154,469,450 		JBrowse link
immune response in brain or nervous system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645 		JBrowse link
immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIGR polymeric immunoglobulin receptor involved_in IDA
IBA		 (PMID:10229845), (PMID:22022593), (PMID:9379029) UniProt
GO_Central		 PMID:9379029 PMID:10229845 PMID:22022593 GO_REF:0000033 NCBI chr 1:206,928,522...206,946,466
Ensembl chr 1:206,928,522...206,946,466 		JBrowse link
G RAB17 RAB17, member RAS oncogene family involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:237,574,326...237,590,734
Ensembl chr 2:237,574,322...237,601,614 		JBrowse link
innate immune response in mucosa term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA4 apolipoprotein A4 involved_in IDA
IEA		 (PMID:15254593) BHF-UCL
Ensembl		 PMID:15254593 GO_REF:0000107 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304 		JBrowse link
G BPIFB1 BPI fold containing family B member 1 involved_in IDA
IBA		 (PMID:21900486) UniProt
GO_Central		 PMID:21900486 GO_REF:0000033 NCBI chr20:33,283,214...33,309,871
Ensembl chr20:33,273,480...33,309,871 		JBrowse link
G CAMP cathelicidin antimicrobial peptide involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 3:48,223,495...48,225,485
Ensembl chr 3:48,223,347...48,225,491 		JBrowse link
G CLDN2 claudin 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:106,900,164...106,930,861
Ensembl chr  X:106,900,164...106,930,861 		JBrowse link
G DEFA1 defensin alpha 1 involved_in IDA
IBA		 (PMID:12860195) UniProt
GO_Central		 PMID:12860195 GO_REF:0000033 NCBI chr 8:6,977,649...6,980,092
Ensembl chr 8:6,977,649...6,980,092 		JBrowse link
G DEFA1B defensin alpha 1B involved_in IDA
IBA		 (PMID:12860195) UniProt
GO_Central		 PMID:12860195 GO_REF:0000033 NCBI chr 8:6,996,766...6,999,198
Ensembl chr 8:6,996,766...6,999,198 		JBrowse link
G DEFA3 defensin alpha 3 involved_in IDA
IBA		 (PMID:12860195) UniProt
GO_Central		 PMID:12860195 GO_REF:0000033 NCBI chr 8:7,015,869...7,018,297
Ensembl chr 8:7,015,869...7,018,297 		JBrowse link
G DEFA4 defensin alpha 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:6,935,820...6,938,306
Ensembl chr 8:6,935,820...6,938,306 		JBrowse link
G DEFA5 defensin alpha 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:7,055,304...7,056,739
Ensembl chr 8:7,055,304...7,056,739 		JBrowse link
G DEFA6 defensin alpha 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:6,924,697...6,926,076
Ensembl chr 8:6,924,697...6,926,076 		JBrowse link
G DEFB1 defensin beta 1 involved_in IDA
IBA		 (PMID:12860195) UniProt
GO_Central		 PMID:12860195 GO_REF:0000033 NCBI chr 8:6,870,592...6,877,936
Ensembl chr 8:6,870,592...6,877,936 		JBrowse link
G FAU FAU ubiquitin like and ribosomal protein S30 fusion involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr11:65,120,630...65,122,134
Ensembl chr11:65,120,630...65,122,177 		JBrowse link
G H2BC10 H2B clustered histone 10 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,272,931...26,273,412
Ensembl chr 6:26,272,931...26,273,412 		JBrowse link
G H2BC11 H2B clustered histone 11 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:27,132,316...27,132,795
Ensembl chr 6:27,122,657...27,132,795 		JBrowse link
G H2BC12 H2B clustered histone 12 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:27,138,293...27,146,858
Ensembl chr 6:27,137,298...27,146,855 		JBrowse link
G H2BC12L H2B clustered histone 12 like involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr21:43,565,182...43,565,648
Ensembl chr21:43,565,182...43,565,648 		JBrowse link
G H2BC12L H2B clustered histone 12 like involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr21:5,972,947...5,973,385
Ensembl chr21:43,565,182...43,565,648 		JBrowse link
G H2BC13 H2B clustered histone 13 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:27,807,479...27,807,929
Ensembl chr 6:27,807,479...27,807,929 		JBrowse link
G H2BC14 H2B clustered histone 14 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:27,815,022...27,815,489
Ensembl chr 6:27,815,022...27,815,489 		JBrowse link
G H2BC15 H2B clustered histone 15 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:27,838,569...27,839,110
Ensembl chr 6:27,838,545...27,855,709 		JBrowse link
G H2BC17 H2B clustered histone 17 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:27,893,425...27,893,891
Ensembl chr 6:27,893,425...27,893,891 		JBrowse link
G H2BC18 H2B clustered histone 18 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 1:149,782,689...149,812,370
Ensembl chr 1:149,782,689...149,812,373 		JBrowse link
G H2BC21 H2B clustered histone 21 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 1:149,884,459...149,886,682
Ensembl chr 1:149,884,459...149,886,682 		JBrowse link
G H2BC26 H2B clustered histone 26 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 1:228,458,103...228,458,558
Ensembl chr 1:228,458,103...228,463,104 		JBrowse link
G H2BC3 H2B clustered histone 3 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,043,227...26,043,713
Ensembl chr 6:26,042,771...26,043,713 		JBrowse link
G H2BC4 H2B clustered histone 4 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,113,170...26,123,926
Ensembl chr 6:26,086,317...26,123,926 		JBrowse link
G H2BC5 H2B clustered histone 5 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,158,121...26,171,349
Ensembl chr 6:26,158,122...26,171,349 		JBrowse link
G H2BC6 H2B clustered histone 6 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,183,761...26,184,230
Ensembl chr 6:26,172,059...26,184,655 		JBrowse link
G H2BC7 H2B clustered histone 7 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,199,516...26,199,988
Ensembl chr 6:26,199,516...26,199,988 		JBrowse link
G H2BC8 H2B clustered histone 8 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,216,200...26,216,688
Ensembl chr 6:26,216,200...26,216,688 		JBrowse link
G H2BC9 H2B clustered histone 9 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,251,614...26,252,075
Ensembl chr 6:26,251,614...26,252,075 		JBrowse link
G IL4 interleukin 4 involved_in ISO (PMID:9973465) BHF-UCL PMID:9973465 NCBI chr 5:132,673,989...132,682,678
Ensembl chr 5:132,673,986...132,682,678 		JBrowse link
G LTF lactotransferrin involved_in IDA (PMID:12037568) UniProt PMID:12037568 NCBI chr 3:46,435,645...46,485,234
Ensembl chr 3:46,435,645...46,485,234 		JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:15692051) MGI PMID:15692051 NCBI chr16:50,693,606...50,733,075
Ensembl chr16:50,693,588...50,733,077 		JBrowse link
G NOS2 nitric oxide synthase 2 involved_in NAS (PMID:18390757) BHF-UCL PMID:18390757 NCBI chr17:27,756,766...27,800,529
Ensembl chr17:27,756,766...27,800,529 		JBrowse link
G PLA2G1B phospholipase A2 group IB involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr12:120,322,115...120,327,779
Ensembl chr12:120,322,115...120,327,779 		JBrowse link
G RNASE2 ribonuclease A family member 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:20,955,487...20,956,436
Ensembl chr14:20,955,487...20,956,436 		JBrowse link
G RNASE3 ribonuclease A family member 3 involved_in IDA
IBA		 (PMID:12860195) UniProt
GO_Central		 PMID:12860195 GO_REF:0000033 NCBI chr14:20,891,385...20,892,348
Ensembl chr14:20,891,385...20,892,348 		JBrowse link
G RPL39 ribosomal protein L39 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr  X:119,786,504...119,791,630
Ensembl chr  X:119,786,504...119,791,630 		JBrowse link
mucosal immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD160 CD160 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:145,719,499...145,739,288
Ensembl chr 1:145,719,471...145,739,288 		JBrowse link
G EPG5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:45,800,581...45,967,329
Ensembl chr18:45,800,581...45,967,329 		JBrowse link
G FDCSP follicular dendritic cell secreted protein involved_in ISO (PMID:24399151) MGI PMID:24399151 NCBI chr 4:70,226,124...70,235,252
Ensembl chr 4:70,226,124...70,235,252 		JBrowse link
G FFAR2 free fatty acid receptor 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr19:35,448,257...35,451,767
Ensembl chr19:35,443,907...35,451,767 		JBrowse link
G FFAR3 free fatty acid receptor 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr19:35,358,151...35,360,489
Ensembl chr19:35,358,460...35,360,489 		JBrowse link
G IFNL2 interferon lambda 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr19:39,268,396...39,270,188
Ensembl chr19:39,268,396...39,270,188 		JBrowse link
G IFNL3 interferon lambda 3 involved_in ISO (PMID:21518880) UniProt PMID:21518880 NCBI chr19:39,243,455...39,245,250
Ensembl chr19:39,243,455...39,245,250 		JBrowse link
G IFNLR1 interferon lambda receptor 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:24,154,168...24,187,289
Ensembl chr 1:24,154,168...24,187,959 		JBrowse link
G IGHA2 immunoglobulin heavy constant alpha 2 (A2m marker) acts_upstream_of_or_within ISO (PMID:14988498) MGI PMID:14988498 NCBI chr14:105,586,937...105,588,394
Ensembl chr14:105,583,731...105,588,395 		JBrowse link
G OTUD7B OTU deubiquitinase 7B involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:149,937,812...150,067,653
Ensembl chr 1:149,937,812...150,010,726 		JBrowse link
positive regulation of immunoglobulin production in mucosal tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C17orf99 chromosome 17 open reading frame 99 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:78,145,571...78,166,297
Ensembl chr17:78,146,385...78,166,297 		JBrowse link
G XCL1 X-C motif chemokine ligand 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 1:168,576,605...168,582,069
Ensembl chr 1:168,576,605...168,582,069 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 27210
    response to stimulus 16590
      immune response 2374
        organ or tissue specific immune response 59
          hepatic immune response 2
          immune response in brain or nervous system 1
          mucosal immune response + 54
paths to the root