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ONTOLOGY REPORT - ANNOTATIONS

Term:organ or tissue specific immune response
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Accession:GO:0002251 term browser browse the term
Definition:An immune response taking place in an organ or tissues such as the liver, brain, mucosa, or nervous system tissues.
Synonyms:exact_synonym: immune response in organ or tissue


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organ or tissue specific immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFH complement factor H acts_upstream_of_or_within ISO (PMID:20702729) MGI PMID:20702729 NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521 		JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:48,387,762...48,389,693
Ensembl chr 3:49,470,222...49,471,331 		JBrowse link
G UMOD uromodulin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:17,960,456...17,980,338
Ensembl chr16:20,430,085...20,449,121 		JBrowse link
antigen transcytosis by M cells in mucosal-associated lymphoid tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GP2 glycoprotein 2 acts_upstream_of_or_within ISO (PMID:19907495) MGI PMID:19907495 NCBI chr16:17,985,586...18,003,831
Ensembl chr16:20,407,989...20,423,199 		JBrowse link
hepatic immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL6 interleukin 6 involved_in ISO (PMID:2444978) BHF-UCL PMID:2444978 NCBI chr 7:23,415,922...23,420,767 JBrowse link
immune response in brain or nervous system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:48,387,762...48,389,693
Ensembl chr 3:49,470,222...49,471,331 		JBrowse link
immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIGR polymeric immunoglobulin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:182,532,773...182,550,662
Ensembl chr 1:186,811,152...186,829,793 		JBrowse link
G RAB17 RAB17, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:124,802,789...124,820,775
Ensembl chr2B:243,654,176...243,671,003 		JBrowse link
innate immune response in mucosa term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA4 apolipoprotein A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:111,659,186...111,661,790
Ensembl chr11:115,591,788...115,594,382 		JBrowse link
G BPIFB1 BPI fold containing family B member 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:29,572,667...29,599,158
Ensembl chr20:30,688,567...30,715,127 		JBrowse link
G CAMP cathelicidin antimicrobial peptide involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:48,137,785...48,139,893
Ensembl chr 3:49,222,110...49,224,250 		JBrowse link
G CLDN2 claudin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:96,020,274...96,031,157
Ensembl chr  X:106,405,879...106,406,571 		JBrowse link
G DEFA4 defensin alpha 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:344,350...346,835
Ensembl chr 8:6,938,152...6,940,669 		JBrowse link
G DEFA6 defensin alpha 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:356,058...357,659
Ensembl chr 8:6,927,326...6,928,970 		JBrowse link
G DEFB1 defensin beta 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:403,268...410,712
Ensembl chr 8:6,874,235...6,881,631 		JBrowse link
G FAU FAU ubiquitin like and ribosomal protein S30 fusion involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:60,482,981...60,484,585
Ensembl chr11:63,821,447...63,822,579 		JBrowse link
G IL4 interleukin 4 involved_in ISO (PMID:9973465) BHF-UCL PMID:9973465 NCBI chr 5:128,091,342...128,099,886
Ensembl chr 5:134,253,039...134,261,581 		JBrowse link
G LOC100979846 histone H2B type 1-C/E/F/G/I involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,034,782...26,036,003
Ensembl chr 6:26,695,177...26,695,557 		JBrowse link
G LOC100981154 histone H2B type 1-K involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,971,577...26,980,171
Ensembl chr 6:27,641,404...27,641,784 		JBrowse link
G LOC100981494 histone H2B type 1-J involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:26,958,944...26,966,117
Ensembl chr 6:27,627,323...27,627,703 		JBrowse link
G LOC100981885 histone H2B type 1-C/E/F/G/I involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,017,776...26,019,904
Ensembl chr 6:26,679,372...26,679,752 		JBrowse link
G LOC100981889 non-secretory ribonuclease involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:1,759,482...1,760,873
Ensembl chr14:19,841,364...19,841,849 		JBrowse link
G LOC100984497 histone H2B type 2-F involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 1:125,100,206...125,156,882 JBrowse link
G LOC100985433 histone H2B type 2-E involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 1:125,228,579...125,230,881
Ensembl chr 1:128,886,807...128,887,187 		JBrowse link
G LOC100985450 histone H2B type 1-C/E/F/G/I involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,051,127...26,051,730
Ensembl chr 6:26,766,746...26,767,126 		JBrowse link
G LOC100985638 histone H2B type 1-N involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:27,667,886...27,685,282
Ensembl chr 6:28,343,094...28,370,373 		JBrowse link
G LOC100987642 histone H2B type 1-O involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:27,723,111...27,724,863
Ensembl chr 6:28,397,363...28,397,743 		JBrowse link
G LOC100989841 histone H2B type 1-C/E/F/G/I involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:25,948,480...25,959,296
Ensembl chr 6:26,695,177...26,695,557
Ensembl chr 6:26,695,177...26,695,557 		JBrowse link
G LOC100991118 defensin alpha 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:264,298...265,962 JBrowse link
G LOC100991783 neutrophil defensin 1 involved_in IEA TreeGrafter GO_REF:0000118
G LOC100992900 histone H2B type 1-B involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:25,878,922...25,879,458
Ensembl chr 6:26,536,827...26,537,207 		JBrowse link
G LOC117981563 neutrophil defensin 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:302,665...305,105 JBrowse link
G LOC129395845 neutrophil defensin 1-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC129395846 neutrophil defensin 1 involved_in IEA TreeGrafter GO_REF:0000118
G LOC129395848 neutrophil defensin 1 involved_in IEA TreeGrafter GO_REF:0000118
G LOC129395849 neutrophil defensin 1 involved_in IEA TreeGrafter GO_REF:0000118
G LOC130540440 histone H2B type 3-B involved_in ISO (PMID:12860195) UniProt PMID:12860195
G LTF lactotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:46,337,738...46,367,476
Ensembl chr 3:47,442,440...47,471,532 		JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:15692051) MGI PMID:15692051 NCBI chr16:30,955,976...30,995,451
Ensembl chr16:49,837,891...49,873,773 		JBrowse link
G PLA2G1B phospholipase A2 group IB involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:117,896,729...117,900,946
Ensembl chr12:121,270,082...121,275,740 		JBrowse link
G RPL39 ribosomal protein L39 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr  X:108,818,773...108,823,935
Ensembl chr  X:119,243,624...119,248,916 		JBrowse link
mucosal immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPG5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:39,129,678...39,250,418
Ensembl chr18:42,669,223...42,788,788 		JBrowse link
G FDCSP follicular dendritic cell secreted protein involved_in ISO (PMID:24399151) MGI PMID:24399151 NCBI chr 4:53,988,378...53,998,028
Ensembl chr 4:60,331,243...60,341,647 		JBrowse link
G FFAR2 free fatty acid receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:32,394,401...32,398,730
Ensembl chr19:41,132,599...41,133,591 		JBrowse link
G FFAR3 free fatty acid receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:32,305,112...32,307,223
Ensembl chr19:41,054,341...41,055,381 		JBrowse link
G IFNL3 interferon lambda 3 involved_in ISO (PMID:21518880) UniProt PMID:21518880 NCBI chr19:36,341,396...36,343,261 JBrowse link
G IFNLR1 interferon lambda receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:23,355,986...23,389,467
Ensembl chr 1:24,335,259...24,368,299 		JBrowse link
G LOC117977026 free fatty acid receptor 3-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:32,317,930...32,319,695 JBrowse link
G OTUD7B OTU deubiquitinase 7B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:125,282,599...125,355,441
Ensembl chr 1:128,944,782...128,976,474 		JBrowse link
positive regulation of immunoglobulin production in mucosal tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C19H17orf99 chromosome 19 C17orf99 homolog involved_in ISO (PMID:28978694) UniProt PMID:28978694 NCBI chr17:72,223,073...72,244,049
Ensembl chr17:77,776,151...77,796,139 		JBrowse link
G LOC100978961 lymphotactin involved_in ISO (PMID:9973465) BHF-UCL PMID:9973465 NCBI chr 1:143,837,578...144,068,261
Ensembl chr 1:147,785,654...147,790,587 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    response to stimulus 8607
      immune response 1635
        organ or tissue specific immune response 50
          hepatic immune response 1
          immune response in brain or nervous system 1
          mucosal immune response + 46
paths to the root