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ONTOLOGY REPORT - ANNOTATIONS


Term:organ or tissue specific immune response
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Accession:GO:0002251 term browser browse the term
Definition:An immune response taking place in an organ or tissues such as the liver, brain, mucosa, or nervous system tissues.
Synonyms:exact_synonym: immune response in organ or tissue



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organ or tissue specific immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfh complement factor H acts_upstream_of_or_within ISO (PMID:20702729) RGD PMID:20702729 NCBI chr13:54,063,079...54,164,523 JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO MGI:3052754 (PMID:24218451) RGD PMID:24218451 NCBI chr 8:109,706,613...109,707,913 JBrowse link
G Umod uromodulin acts_upstream_of_or_within ISO (PMID:28990932) RGD PMID:28990932 NCBI chr 1:173,816,341...173,829,681 JBrowse link
antigen transcytosis by M cells in mucosal-associated lymphoid tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gp2 glycoprotein 2 acts_upstream_of_or_within ISO (PMID:19907495) RGD PMID:19907495 NCBI chr 1:173,797,057...173,812,619 JBrowse link
hepatic immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il6 interleukin 6 involved_in ISO (PMID:2444978) RGD PMID:2444978 NCBI chr 4:5,889,999...5,894,575 JBrowse link
immune response in brain or nervous system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO MGI:3052754 (PMID:24218451) RGD PMID:24218451 NCBI chr 8:109,706,613...109,707,913 JBrowse link
immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pigr polymeric immunoglobulin receptor involved_in IEA
ISS
ISO
IBA
GO_REF:0000107
GO_REF:0000024
(PMID:10229845), (PMID:22022593), (PMID:9379029)
GO_REF:0000033
Ensembl
UniProt
RGD
GO_Central
PMID:9379029 PMID:10229845 PMID:22022593 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr13:44,851,001...44,879,143 JBrowse link
G Rab17 RAB17, member RAS oncogene family involved_in ISO (PMID:9624171) RGD PMID:9624171 NCBI chr 9:91,552,924...91,566,759 JBrowse link
innate immune response in mucosa term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa4 apolipoprotein A4 involved_in IEA
ISO
GO_REF:0000107
(PMID:15254593)
Ensembl
RGD
PMID:15254593 GO_REF:0000107 NCBI chr 8:55,435,779...55,438,160 JBrowse link
G Bpifb1 BPI fold containing family B, member 1 involved_in ISO
IBA
IEA
(PMID:21900486)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:21900486 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:142,672,995...142,706,258 JBrowse link
G Camp cathelicidin antimicrobial peptide involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr 8:109,841,729...109,843,543 JBrowse link
G Cldn2 claudin 2 involved_in ISO (PMID:28618266) RGD PMID:28618266 NCBI chr  X:108,248,383...108,258,847 JBrowse link
G Defa24 defensin alpha 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,349,550...70,350,582 JBrowse link
G Defa3 defensin alpha 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,533,436...70,535,592 JBrowse link
G Defa31 defensin alpha 31 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,513,892...70,516,234 JBrowse link
G Defa5 defensin alpha 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,342,530...70,344,854 JBrowse link
G Defa6 defensin alpha 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,405,223...70,406,237 JBrowse link
G Defa8 defensin alpha 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,433,121...70,434,154 JBrowse link
G Defa9 defensin alpha 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,481,813...70,482,803 JBrowse link
G Defal1 defensin alpha-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,371,492...70,372,481 JBrowse link
G Defb1 defensin beta 1 involved_in ISO
IBA
(PMID:12860195)
GO_REF:0000033
RGD
GO_Central
PMID:12860195 GO_REF:0000033 NCBI chr16:77,001,326...77,016,068 JBrowse link
G Defb10 defensin beta 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,202,599...70,212,734 JBrowse link
G Defb11 defensin beta 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,156,044...70,163,062 JBrowse link
G Defb2 defensin beta 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,231,870...70,245,817 JBrowse link
G Defb37 defensin beta 37 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,783,532...70,796,798 JBrowse link
G Defb38 defensin beta 38 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,756,370...70,759,701 JBrowse link
G Defb39 defensin beta 39 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,740,347...70,744,157 JBrowse link
G Defb9 defensin beta 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,180,692...70,183,602 JBrowse link
G Ear1 eosinophil-associated, ribonuclease A family, member 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:24,555,280...24,556,189 JBrowse link
G Ear1l1 eosinophil-associated, ribonuclease A family, member 1 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:24,486,827...24,487,702 JBrowse link
G ENSRNOG00000064390 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G ENSRNOG00000069429 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Fau FAU ubiquitin like and ribosomal protein S30 fusion involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr 1:203,350,226...203,351,741 JBrowse link
G H2bc12 H2B clustered histone 12 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:47,181,477...47,181,940 JBrowse link
G H2bc18 H2B clustered histone 18 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr 2:183,838,331...183,842,769 JBrowse link
G H2bc3 H2B clustered histone 3 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:41,807,913...41,808,543 JBrowse link
G H2bc6 H2B clustered histone 6 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:41,520,775...41,521,238 JBrowse link
G H2bc8 H2B clustered histone 8 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:47,404,405...47,405,155 JBrowse link
G H2bc9 H2B clustered histone 9 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:42,470,593...42,478,590 JBrowse link
G H2bu1 H2B.U histone 1 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr10:44,232,318...44,233,065 JBrowse link
G Hist1h2bc histone cluster 1, H2bc involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:42,692,335...42,696,601 JBrowse link
G Hist1h2bd histone cluster 1 H2B family member D involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:47,488,627...47,489,008 JBrowse link
G Hist1h2bq histone cluster 1 H2B family member Q involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:41,859,955...41,869,889 JBrowse link
G Hist2h2be histone cluster 2 H2B family member E involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr 2:183,780,583...183,783,030 JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:9973465) RGD PMID:9973465 NCBI chr10:38,272,003...38,277,549 JBrowse link
G LOC100361866 eosinophil cationic protein-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:24,535,701...24,536,571 JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:12037568) RGD PMID:12037568 NCBI chr 8:119,878,344...119,901,189 JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within ISO MGI:3529594 (PMID:15692051) RGD PMID:15692051 NCBI chr19:34,555,832...34,596,281 JBrowse link
G Np4 defensin NP-4 precursor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,494,607...70,497,261 JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in ISO
IEA
(PMID:12860195)
GO_REF:0000107
RGD
Ensembl
PMID:12860195 GO_REF:0000107 NCBI chr12:46,802,932...46,814,511 JBrowse link
G RatNP-3b defensin RatNP-3 precursor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,544,364...70,546,533 JBrowse link
G Rnase17 ribonuclease 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:24,499,178...24,500,140 JBrowse link
G Rnase2 ribonuclease A family member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:24,449,618...24,450,427 JBrowse link
G Rnase3 ribonuclease A family member 3 involved_in ISO
IBA
(PMID:12860195)
GO_REF:0000033
RGD
GO_Central
PMID:12860195 GO_REF:0000033 NCBI chr15:26,985,399...26,986,269 JBrowse link
G Rpl39 ribosomal protein L39 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr  X:116,327,216...116,330,211 JBrowse link
mucosal immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd160 CD160 molecule involved_in ISO (PMID:22801499) RGD PMID:22801499 NCBI chr 2:184,340,820...184,383,421 JBrowse link
G Epg5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_or_within ISO (PMID:26764600) RGD PMID:26764600 NCBI chr18:71,403,990...71,502,079 JBrowse link
G Ffar2 free fatty acid receptor 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:23665276)
UniProt
RGD
PMID:23665276 GO_REF:0000024 NCBI chr 1:95,199,277...95,202,599 JBrowse link
G Ffar3 free fatty acid receptor 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:23665276)
UniProt
RGD
PMID:23665276 GO_REF:0000024 NCBI chr 1:86,105,388...86,106,728 JBrowse link
G Ifnl3 interferon, lambda 3 involved_in ISO (PMID:21518880) RGD PMID:21518880 NCBI chr 1:83,814,456...83,816,096 JBrowse link
G Ifnlr1 interferon, lambda receptor 1 involved_in ISO (PMID:21518880) RGD PMID:21518880 NCBI chr 5:147,919,547...147,942,328 JBrowse link
G Otud7b OTU deubiquitinase 7B involved_in ISO (PMID:23334419) RGD PMID:23334419 NCBI chr 2:186,350,811...186,411,461 JBrowse link
positive regulation of immunoglobulin production in mucosal tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C10h17orf99 similar to human chromosome 17 open reading frame 99 involved_in ISO (PMID:28978694) RGD PMID:28978694 NCBI chr10:103,015,371...103,027,407 JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:9973465)
Ensembl
RGD
PMID:9973465 GO_REF:0000107 NCBI chr13:77,248,687...77,252,343 JBrowse link

Term paths to the root
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Term Annotations click to browse term
  biological_process 20534
    response to stimulus 11012
      immune response 2219
        organ or tissue specific immune response 63
          hepatic immune response 1
          immune response in brain or nervous system 1
          mucosal immune response + 59
paths to the root