Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:wound healing involved in inflammatory response
go back to main search page
Accession:GO:0002246 term browser browse the term
Definition:The series of events that restore integrity to damaged tissue that contribute to an inflammatory response.
Synonyms:related_synonym: healing during inflammatory response;   inflammatory response wound healing


show annotations for term's descendants           Sort by:
wound healing involved in inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd44 CD44 molecule acts_upstream_of_or_within ISO MGI:2181292 (PMID:11935029) RGD PMID:11935029 NCBI chr 3:109,610,824...109,699,776
Ensembl chr 3:89,157,058...89,244,620 		JBrowse link
G Hmox1 heme oxygenase 1 involved_in ISO
IEA		 (PMID:9884342)
GO_REF:0000107		 RGD
Ensembl		 PMID:9884342 GO_REF:0000107 NCBI chr19:13,452,365...13,479,823
Ensembl chr19:13,467,244...13,474,079 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma acts_upstream_of_or_within_negative_effect ISO (PMID:21880694) RGD PMID:21880694 NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
G Tlr4 toll-like receptor 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:21880694)		 Ensembl
RGD		 PMID:21880694 GO_REF:0000107 NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:80,145,826...80,159,628 		JBrowse link
connective tissue replacement involved in inflammatory response wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec10a C-type lectin domain containing 10A acts_upstream_of_or_within ISO MGI:2183546 (PMID:15784728) RGD PMID:15784728 NCBI chr10:54,876,244...54,880,439
Ensembl chr10:54,876,260...54,880,435 		JBrowse link
G F2r coagulation factor II (thrombin) receptor involved_in ISO
IEA
ISS		 (PMID:9639571)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:9639571 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:26,869,343...26,885,856
Ensembl chr 2:26,868,404...26,885,870 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in IEA
ISO		 GO_REF:0000107
(PMID:18037992)		 Ensembl
RGD		 PMID:18037992 GO_REF:0000107 NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Il1a interleukin 1 alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15784728)		 Ensembl
RGD		 PMID:15784728 GO_REF:0000107 NCBI chr 3:136,979,804...136,990,236
Ensembl chr 3:116,526,604...116,536,822 		JBrowse link
G Lrrc25 leucine rich repeat containing 25 acts_upstream_of_or_within ISO (PMID:30340835) RGD PMID:30340835 NCBI chr16:18,806,888...18,813,723
Ensembl chr16:18,806,890...18,813,671 		JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 acts_upstream_of_or_within ISO (PMID:23100531) RGD PMID:23100531 NCBI chr  X:3,766,509...3,772,578
Ensembl chr  X:1,212,972...1,217,664 		JBrowse link
negative regulation of connective tissue replacement involved in inflammatory response wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929 		JBrowse link
G Ager advanced glycosylation end product-specific receptor involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:4,152,758...4,155,956
Ensembl chr20:4,147,890...4,151,078 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma acts_upstream_of_or_within IDA PMID:29695452 BHF-UCL PMID:29695452 RGD:150521636 NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20546
    response to stimulus 11039
      response to stress 4321
        response to wounding 623
          wound healing 422
            wound healing involved in inflammatory response 12
              clearance of damaged tissue involved in inflammatory response wound healing 0
              connective tissue replacement involved in inflammatory response wound healing + 9
Path 2
Term Annotations click to browse term
  biological_process 20546
    response to stimulus 11039
      response to stress 4321
        defense response 1943
          inflammatory response 894
            inflammatory response to wounding 35
              wound healing involved in inflammatory response 12
                clearance of damaged tissue involved in inflammatory response wound healing 0
                connective tissue replacement involved in inflammatory response wound healing + 9
paths to the root