ONTOLOGY REPORT - ANNOTATIONS
Term: somatic diversification of immune receptors
Accession: GO:0002200
browse the term
Definition: The somatic process allowing for the production of immune receptors whose specificity is not encoded in the germline genomic sequences.
Comment: Note that this process covers somatic recombination, gene conversion, hypermutation, N-region addition, and alternate splicing processes of immune receptor diversification.
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POLB
DNA polymerase beta
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24388753)
Ensembl MGI
PMID:24388753
GO_REF:0000107
NCBI chr17:11,356,130...11,388,122
Ensembl chr17:11,356,129...11,388,821
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YY1
YY1 transcription factor
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 7:121,132,168...121,170,699
Ensembl chr 7:121,132,191...121,170,697
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CYREN
cell cycle regulator of NHEJ
involved_in
ISO
(PMID:30017584), (PMID:31795137)
UniProt
PMID:30017584 PMID:31795137
NCBI chr18:14,127,724...14,133,486
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FOXP1
forkhead box P1
acts_upstream_of_or_within
ISO
(PMID:16819554)
MGI
PMID:16819554
NCBI chr13:52,346,844...52,974,358
Ensembl chr13:52,348,234...52,876,892
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LIG4
DNA ligase 4
involved_in acts_upstream_of_or_within
IEA ISO IBA
(PMID:9823897)
Ensembl MGI GO_Central
PMID:9823897
GO_REF:0000033 GO_REF:0000107
NCBI chr11:75,537,027...75,547,711
Ensembl chr11:75,537,036...75,547,716
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NHEJ1
non-homologous end joining factor 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr15:121,100,624...121,190,086
Ensembl chr15:121,100,628...121,194,042
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PRKDC
protein kinase, DNA-activated, catalytic subunit
involved_in acts_upstream_of_or_within
IEA ISO IBA
(PMID:9768755)
Ensembl MGI GO_Central
PMID:9768755
GO_REF:0000033 GO_REF:0000107
NCBI chr 4:79,687,375...79,850,146
Ensembl chr 4:79,687,375...79,846,656
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TCF3
transcription factor 3
acts_upstream_of_or_within involved_in
ISO IBA IEA
(PMID:16428437)
MGI GO_Central Ensembl
PMID:16428437
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:76,859,079...76,906,275
Ensembl chr 2:76,859,089...76,898,351
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VCAN
versican
acts_upstream_of_or_within
ISO
(PMID:9875844)
MGI
PMID:9875844
NCBI chr 2:91,358,348...91,643,697
Ensembl chr 2:91,384,391...91,811,208
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AICDA
activation induced cytidine deaminase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17713479)
Ensembl MGI
PMID:17713479
GO_REF:0000107
NCBI chr 5:62,777,236...62,787,342
Ensembl chr 5:62,777,352...62,787,369
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ATAD5
ATPase family AAA domain containing 5
involved_in acts_upstream_of
IEA ISO
(PMID:25404367)
Ensembl MGI
PMID:25404367
GO_REF:0000107
NCBI chr12:42,874,705...42,920,438
Ensembl chr12:42,874,599...42,920,399
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BATF
basic leucine zipper ATF-like transcription factor
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 7:98,670,211...98,692,230
Ensembl chr 7:98,670,211...98,692,230
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CD40LG
CD40 ligand
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr X:111,778,666...111,788,901
Ensembl chr X:111,778,493...111,789,709
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ERCC1
ERCC excision repair 1, endonuclease non-catalytic subunit
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15280420)
Ensembl MGI
PMID:15280420
GO_REF:0000107
NCBI chr 6:51,783,537...51,808,898
Ensembl chr 6:51,783,478...51,798,984
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EXO1
exonuclease 1
acts_upstream_of_or_within
ISO
(PMID:14716311)
MGI
PMID:14716311
NCBI chr10:15,317,555...15,360,593
Ensembl chr10:15,317,581...15,359,839
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EXOSC3
exosome component 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:238,536,341...238,541,756
Ensembl chr 1:238,536,345...238,541,333
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EXOSC6
exosome component 6
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:13,295,591...13,296,942
Ensembl chr 6:13,295,125...13,296,914
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LIG4
DNA ligase 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17713479)
Ensembl MGI
PMID:17713479
GO_REF:0000107
NCBI chr11:75,537,027...75,547,711
Ensembl chr11:75,537,036...75,547,716
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MLH1
mutL homolog 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12743174)
Ensembl MGI
PMID:12743174
GO_REF:0000107
NCBI chr13:21,791,276...21,877,789
Ensembl chr13:21,791,203...21,877,757
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MSH2
mutS homolog 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10430621) (PMID:12743174)
Ensembl MGI
PMID:10430621 PMID:12743174
GO_REF:0000107
NCBI chr 3:93,082,958...93,163,556
Ensembl chr 3:93,081,219...93,163,585
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MSH6
mutS homolog 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17015724) (PMID:16618598)
Ensembl MGI
PMID:16618598 PMID:17015724
GO_REF:0000107
NCBI chr 3:92,792,590...92,814,154
Ensembl chr 3:92,785,664...92,814,238
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NBN
nibrin
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 4:46,787,664...46,854,331
Ensembl chr 4:46,787,691...46,874,603
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NFKBIZ
NFKB inhibitor zeta
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr13:157,261,419...157,273,119
Ensembl chr13:157,261,419...157,272,688
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PCYT1A
phosphate cytidylyltransferase 1A, choline
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr13:133,794,337...133,851,004
Ensembl chr13:133,818,761...133,850,996
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RNF168
ring finger protein 168
involved_in
ISO
(PMID:20080757)
UniProt
PMID:20080757
NCBI chr13:133,625,534...133,659,253
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RNF8
ring finger protein 8
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 7:32,931,786...32,969,536
Ensembl chr 7:32,931,786...32,970,585
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SANBR
SANT and BTB domain regulator of CSR
involved_in
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 3:80,675,008...80,746,306
Ensembl chr 3:80,675,008...80,746,252
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SWAP70
switching B cell complex subunit SWAP70
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9642267)
Ensembl MGI
PMID:9642267
GO_REF:0000107
NCBI chr 2:49,721,120...49,805,262
Ensembl chr 2:49,719,669...49,805,049
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UNG
uracil DNA glycosylase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17015724)
Ensembl MGI
PMID:17015724
GO_REF:0000107
NCBI chr14:41,746,498...41,757,841
Ensembl chr14:41,746,502...41,757,807
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VCAN
versican
acts_upstream_of_or_within
ISO
(PMID:17713479)
MGI
PMID:17713479
NCBI chr 2:91,358,348...91,643,697
Ensembl chr 2:91,384,391...91,811,208
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CCR6
C-C motif chemokine receptor 6
involved_in
ISO
(PMID:27174992)
UniProt
PMID:27174992
NCBI chr 1:2,016,600...2,034,172
Ensembl chr 1:2,018,608...2,019,821
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BCL6
BCL6 transcription repressor
involved_in acts_upstream_of
IEA ISO
(PMID:10490661)
Ensembl MGI
PMID:10490661
GO_REF:0000107
NCBI chr13:125,377,247...125,401,328
Ensembl chr13:125,377,250...125,393,330
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FOXP3
forkhead box P3
involved_in acts_upstream_of
IEA ISO
(PMID:16275384)
Ensembl MGI
PMID:16275384
GO_REF:0000107
NCBI chr X:43,303,777...43,328,164
Ensembl chr X:43,303,785...43,322,968
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IL4
interleukin 4
acts_upstream_of
ISO
(PMID:14988498)
MGI
PMID:14988498
NCBI chr 2:134,986,817...134,994,365
Ensembl chr 2:134,986,817...134,994,365
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STAT6
signal transducer and activator of transcription 6
involved_in acts_upstream_of
IEA ISO
(PMID:10490661)
Ensembl MGI
PMID:10490661
GO_REF:0000107
NCBI chr 5:22,406,356...22,422,412
Ensembl chr 5:22,406,368...22,421,989
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HSPD1
heat shock protein family D (Hsp60) member 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr15:101,360,355...101,373,498
Ensembl chr15:101,360,094...101,373,526
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IL4
interleukin 4
acts_upstream_of
ISO
(PMID:14988498)
MGI
PMID:14988498
NCBI chr 2:134,986,817...134,994,365
Ensembl chr 2:134,986,817...134,994,365
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PARP3
poly(ADP-ribose) polymerase family member 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr13:34,075,807...34,084,384
Ensembl chr13:34,076,012...34,085,210
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BCL6
BCL6 transcription repressor
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10490661)
Ensembl MGI
PMID:10490661
GO_REF:0000107
NCBI chr13:125,377,247...125,401,328
Ensembl chr13:125,377,250...125,393,330
G
FOXP3
forkhead box P3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16275384)
Ensembl MGI
PMID:16275384
GO_REF:0000107
NCBI chr X:43,303,777...43,328,164
Ensembl chr X:43,303,785...43,322,968
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NDFIP1
Nedd4 family interacting protein 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17137798)
Ensembl MGI
PMID:17137798
GO_REF:0000107
NCBI chr 2:143,688,946...143,734,523
Ensembl chr 2:143,629,783...143,734,520
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TNFSF4
TNF superfamily member 4
involved_in
ISO
(PMID:12496423)
BHF-UCL
PMID:12496423
NCBI chr 9:115,535,185...115,857,457
Ensembl chr 9:115,550,569...115,659,263
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EXOSC3
exosome component 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21255825)
Ensembl MGI
PMID:21255825
GO_REF:0000107
NCBI chr 1:238,536,341...238,541,756
Ensembl chr 1:238,536,345...238,541,333
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EXOSC6
exosome component 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21255825)
Ensembl MGI
PMID:21255825
GO_REF:0000107
NCBI chr 6:13,295,591...13,296,942
Ensembl chr 6:13,295,125...13,296,914
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HMCES
5-hydroxymethylcytosine binding, ES cell specific
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr13:71,732,311...71,752,296
Ensembl chr13:71,732,277...71,753,486
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KMT5B
lysine methyltransferase 5B
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 2:4,710,510...4,768,237
Ensembl chr 2:4,711,023...4,765,979
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KMT5C
lysine methyltransferase 5C
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:59,517,058...59,524,551
Ensembl chr 6:59,517,098...59,524,550
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MAD2L2
mitotic arrest deficient 2 like 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:71,773,680...71,779,192
Ensembl chr 6:71,773,154...71,786,517
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PAXIP1
PAX interacting protein 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr18:3,066,853...3,111,239
Ensembl chr18:3,066,848...3,111,240
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RIF1
replication timing regulatory factor 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr15:769,518...832,036
Ensembl chr15:774,191...832,010
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SHLD1
shieldin complex subunit 1
involved_in
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr17:14,610,723...14,706,082
Ensembl chr17:14,610,817...14,707,872
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SHLD2
shieldin complex subunit 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr14:88,005,599...88,121,155
Ensembl chr14:88,005,611...88,121,352
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TFRC
transferrin receptor
involved_in
ISS IEA
UniProt Ensembl
GO_REF:0000024 GO_REF:0000107
NCBI chr13:133,976,765...133,997,554
Ensembl chr13:133,970,985...134,000,276
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TP53BP1
tumor protein p53 binding protein 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:127,958,500...128,032,370
Ensembl chr 1:127,959,213...128,028,712
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TRAPPC13
trafficking protein particle complex subunit 13
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr16:44,146,574...44,186,346
Ensembl chr16:44,156,163...44,184,662
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MLH1
mutL homolog 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr13:21,791,276...21,877,789
Ensembl chr13:21,791,203...21,877,757
G
MSH2
mutS homolog 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 3:93,082,958...93,163,556
Ensembl chr 3:93,081,219...93,163,585
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NSD2
nuclear receptor binding SET domain protein 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23241889)
Ensembl MGI
PMID:23241889
GO_REF:0000107
NCBI chr 8:938,832...1,018,032
Ensembl chr 8:964,893...1,018,028
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PMS2
PMS1 homolog 2, mismatch repair system component
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 3:5,118,002...5,145,634
Ensembl chr 3:5,118,018...5,145,628
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TGFB1
transforming growth factor beta 1
acts_upstream_of_or_within involved_in
ISO IEA ISS
(PMID:14988498)
MGI Ensembl AgBase
PMID:14988498
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046
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TNFSF13
TNF superfamily member 13
acts_upstream_of_or_within involved_in
ISO IBA IEA
(PMID:14988498)
MGI GO_Central Ensembl
PMID:14988498
GO_REF:0000033 GO_REF:0000107
NCBI chr12:52,853,646...52,857,033
Ensembl chr12:52,853,904...52,857,029
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CLCF1
cardiotrophin like cytokine factor 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 2:5,142,315...5,152,750
Ensembl chr 2:5,143,313...5,152,692
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IL4
interleukin 4
acts_upstream_of_or_within
ISO
(PMID:14988498)
MGI
PMID:14988498
NCBI chr 2:134,986,817...134,994,365
Ensembl chr 2:134,986,817...134,994,365
G
STAT6
signal transducer and activator of transcription 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10490661)
Ensembl MGI
PMID:10490661
GO_REF:0000107
NCBI chr 5:22,406,356...22,422,412
Ensembl chr 5:22,406,368...22,421,989
G
ATAD5
ATPase family AAA domain containing 5
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:25404367)
Ensembl MGI
PMID:25404367
GO_REF:0000107
NCBI chr12:42,874,705...42,920,438
Ensembl chr12:42,874,599...42,920,399
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CD28
CD28 molecule
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:7688139)
Ensembl MGI
PMID:7688139
GO_REF:0000107
NCBI chr15:107,128,103...107,155,431
Ensembl chr15:107,128,203...107,162,935
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CD40
CD40 molecule
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:12882831)
MGI Ensembl
PMID:12882831
GO_REF:0000107
NCBI chr17:48,286,116...48,298,188
Ensembl chr17:48,286,029...48,298,528
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IFNG
interferon gamma
acts_upstream_of_or_within
ISO
(PMID:12882831)
MGI
PMID:12882831
NCBI chr 5:32,477,906...32,482,670
Ensembl chr 5:32,477,906...32,482,670
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IL2
interleukin 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:1830926)
Ensembl MGI
PMID:1830926
GO_REF:0000107
NCBI chr 8:101,640,938...101,645,683
Ensembl chr 8:101,640,944...101,645,609
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IL4
interleukin 4
acts_upstream_of_or_within
ISO
(PMID:12882831), (PMID:14988498)
MGI
PMID:12882831 PMID:14988498
NCBI chr 2:134,986,817...134,994,365
Ensembl chr 2:134,986,817...134,994,365
G
MLH1
mutL homolog 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr13:21,791,276...21,877,789
Ensembl chr13:21,791,203...21,877,757
G
MSH2
mutS homolog 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 3:93,082,958...93,163,556
Ensembl chr 3:93,081,219...93,163,585
G
PAGR1
PAXIP1 associated glutamate rich protein 1
involved_in
ISO
(PMID:26744420)
UniProt
PMID:26744420
NCBI chr 3:18,052,679...18,056,920
Ensembl chr 3:18,052,935...18,056,837
G
PAXIP1
PAX interacting protein 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr18:3,066,853...3,111,239
Ensembl chr18:3,066,848...3,111,240
G
PMS2
PMS1 homolog 2, mismatch repair system component
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 3:5,118,002...5,145,634
Ensembl chr 3:5,118,018...5,145,628
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PTPRC
protein tyrosine phosphatase receptor type C
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9015183)
Ensembl MGI
PMID:9015183
GO_REF:0000107
NCBI chr10:21,482,984...21,601,627
Ensembl chr10:21,560,073...21,601,308
G
TBX21
T-box transcription factor 21
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12882831)
Ensembl MGI
PMID:12882831
GO_REF:0000107
NCBI chr12:23,996,415...24,009,353
Ensembl chr12:23,996,415...24,009,355
G
APLF
aprataxin and PNKP like factor
acts_upstream_of_or_within
ISO
(PMID:21211721)
MGI
PMID:21211721
NCBI chr 3:73,752,115...73,831,158
Ensembl chr 3:73,752,118...73,831,035
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MIR181B-1
microRNA mir-181b-1
acts_upstream_of_or_within
ISO
(PMID:18762567)
MGI
PMID:18762567
NCBI chr10:21,696,492...21,696,571
Ensembl chr10:21,696,492...21,696,571
G
MIR181B-2
microRNA mir-181b-2
acts_upstream_of_or_within
ISO
(PMID:18762567)
MGI
PMID:18762567
NCBI chr 1:265,499,111...265,499,196
Ensembl chr 1:265,499,108...265,499,196
G
SUPT6H
SPT6 homolog, histone chaperone and transcription elongation factor
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr12:44,916,716...44,940,732
Ensembl chr12:44,917,633...44,940,273
G
FOXP3
forkhead box P3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16275384)
Ensembl MGI
PMID:16275384
GO_REF:0000107
NCBI chr X:43,303,777...43,328,164
Ensembl chr X:43,303,785...43,322,968
G
IL27RA
interleukin 27 receptor subunit alpha
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:11057672)
Ensembl MGI
PMID:11057672
GO_REF:0000107
NCBI chr 2:65,127,278...65,149,665
Ensembl chr 2:65,127,287...65,149,740
G
NDFIP1
Nedd4 family interacting protein 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17137798)
Ensembl MGI
PMID:17137798
GO_REF:0000107
NCBI chr 2:143,688,946...143,734,523
Ensembl chr 2:143,629,783...143,734,520
G
SLC15A4
solute carrier family 15 member 4
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr14:26,122,362...26,154,414
Ensembl chr14:26,122,386...26,154,781
G
ADAR
adenosine deaminase RNA specific
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23209284)
Ensembl MGI
PMID:23209284
GO_REF:0000107
NCBI chr 4:95,154,230...95,197,308
Ensembl chr 4:95,154,357...95,197,304
G
AICDA
activation induced cytidine deaminase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 5:62,777,236...62,787,342
Ensembl chr 5:62,777,352...62,787,369
G
CTNNBL1
catenin beta like 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr17:40,809,932...40,948,844
Ensembl chr17:40,774,720...40,949,022
G
POLB
DNA polymerase beta
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24388753)
Ensembl MGI
PMID:24388753
GO_REF:0000107
NCBI chr17:11,356,130...11,388,122
Ensembl chr17:11,356,129...11,388,821
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AICDA
activation induced cytidine deaminase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 5:62,777,236...62,787,342
Ensembl chr 5:62,777,352...62,787,369
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EXO1
exonuclease 1
acts_upstream_of_or_within
ISO
(PMID:14716311)
MGI
PMID:14716311
NCBI chr10:15,317,555...15,360,593
Ensembl chr10:15,317,581...15,359,839
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HMCES
5-hydroxymethylcytosine binding, ES cell specific
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr13:71,732,311...71,752,296
Ensembl chr13:71,732,277...71,753,486
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MCM3AP
minichromosome maintenance complex component 3 associated protein
involved_in
IEA
Ensembl
GO_REF:0000107
G
MLH1
mutL homolog 1
involved_in acts_upstream_of_or_within
IEA ISO IBA
(PMID:10092760), (PMID:10429667)
Ensembl MGI GO_Central
PMID:10092760 PMID:10429667
GO_REF:0000033 GO_REF:0000107
NCBI chr13:21,791,276...21,877,789
Ensembl chr13:21,791,203...21,877,757
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MSH2
mutS homolog 2
involved_in acts_upstream_of_or_within NOT|acts_upstream_of_or_within
IEA ISO
(PMID:9697842), (PMID:9697843) (PMID:9607915) (PMID:15494304) (PMID:9607916) (PMID:14568978)
Ensembl MGI
PMID:9607915 PMID:9607916 PMID:9697842 PMID:9697843 PMID:14568978 PMID:15494304 More...
GO_REF:0000107
NCBI chr 3:93,082,958...93,163,556
Ensembl chr 3:93,081,219...93,163,585
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MSH3
mutS homolog 3
NOT|acts_upstream_of_or_within
ISO
(PMID:10662804)
MGI
PMID:10662804
NCBI chr 2:89,255,647...89,456,102
Ensembl chr 2:89,250,003...89,453,936
G
MSH6
mutS homolog 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16618598) (PMID:10662804), (PMID:15238604), (PMID:17015724)
Ensembl MGI
PMID:10662804 PMID:15238604 PMID:16618598 PMID:17015724
GO_REF:0000107
NCBI chr 3:92,792,590...92,814,154
Ensembl chr 3:92,785,664...92,814,238
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NUGGC
nuclear GTPase, germinal center associated
acts_upstream_of_or_within
ISO
(PMID:22833677)
MGI
PMID:22833677
NCBI chr14:11,775,684...11,826,162
Ensembl chr14:11,775,704...11,826,096
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PMS2
PMS1 homolog 2, mismatch repair system component
involved_in acts_upstream_of_or_within
IEA IBA ISO
(PMID:10429667)
Ensembl GO_Central MGI
PMID:10429667
GO_REF:0000033 GO_REF:0000107
NCBI chr 3:5,118,002...5,145,634
Ensembl chr 3:5,118,018...5,145,628
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POLB
DNA polymerase beta
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24388753)
Ensembl MGI
PMID:24388753
GO_REF:0000107
NCBI chr17:11,356,130...11,388,122
Ensembl chr17:11,356,129...11,388,821
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POLM
DNA polymerase mu
acts_upstream_of_or_within
ISO
(PMID:15789338)
MGI
PMID:15789338
NCBI chr18:51,077,845...51,091,354
Ensembl chr18:51,079,503...51,088,781
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POLQ
DNA polymerase theta
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr13:138,962,634...139,108,499
Ensembl chr13:138,978,609...139,108,500
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SAMHD1
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr17:40,117,348...40,171,935
Ensembl chr17:40,107,462...40,171,878
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UNG
uracil DNA glycosylase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15494304) (PMID:17015724)
Ensembl MGI
PMID:15494304 PMID:17015724
GO_REF:0000107
NCBI chr14:41,746,498...41,757,841
Ensembl chr14:41,746,502...41,757,807
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MLH1
mutL homolog 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:11828012)
Ensembl MGI
PMID:11828012
GO_REF:0000107
NCBI chr13:21,791,276...21,877,789
Ensembl chr13:21,791,203...21,877,757
G
MSH2
mutS homolog 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15494304) (PMID:14568978) (PMID:14563316), (PMID:15955838) (PMID:11828012)
Ensembl MGI
PMID:11828012 PMID:14563316 PMID:14568978 PMID:15494304 PMID:15955838
GO_REF:0000107
NCBI chr 3:93,082,958...93,163,556
Ensembl chr 3:93,081,219...93,163,585
G
MSH3
mutS homolog 3
involved_in acts_upstream_of_or_within
IBA ISO
(PMID:15238604)
GO_Central MGI
PMID:15238604
GO_REF:0000033
NCBI chr 2:89,255,647...89,456,102
Ensembl chr 2:89,250,003...89,453,936
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MSH6
mutS homolog 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15238604)
Ensembl MGI
PMID:15238604
GO_REF:0000107
NCBI chr 3:92,792,590...92,814,154
Ensembl chr 3:92,785,664...92,814,238
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PMS2
PMS1 homolog 2, mismatch repair system component
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:11828012)
Ensembl MGI
PMID:11828012
GO_REF:0000107
NCBI chr 3:5,118,002...5,145,634
Ensembl chr 3:5,118,018...5,145,628
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UNG
uracil DNA glycosylase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15494304)
Ensembl MGI
PMID:15494304
GO_REF:0000107
NCBI chr14:41,746,498...41,757,841
Ensembl chr14:41,746,502...41,757,807
G
MLH1
mutL homolog 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12743174)
Ensembl MGI
PMID:12743174
GO_REF:0000107
NCBI chr13:21,791,276...21,877,789
Ensembl chr13:21,791,203...21,877,757
G
MSH2
mutS homolog 2
involved_in acts_upstream_of_or_within
IEA ISO IBA
(PMID:12743174)
Ensembl MGI GO_Central
PMID:12743174
GO_REF:0000033 GO_REF:0000107
NCBI chr 3:93,082,958...93,163,556
Ensembl chr 3:93,081,219...93,163,585
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BCL11B
BCL11 transcription factor B
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12717433)
Ensembl MGI
PMID:12717433
GO_REF:0000107
NCBI chr 7:120,205,008...120,295,737
Ensembl chr 7:120,205,008...120,295,936
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LEF1
lymphoid enhancer binding factor 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9462507)
Ensembl MGI
PMID:9462507
GO_REF:0000107
NCBI chr 8:113,824,511...113,944,078
Ensembl chr 8:113,825,161...113,944,070
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LIG4
DNA ligase 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10911993)
Ensembl MGI
PMID:10911993
GO_REF:0000107
NCBI chr11:75,537,027...75,547,711
Ensembl chr11:75,537,036...75,547,716
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PRKDC
protein kinase, DNA-activated, catalytic subunit
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9768755)
Ensembl MGI
PMID:9768755
GO_REF:0000107
NCBI chr 4:79,687,375...79,850,146
Ensembl chr 4:79,687,375...79,846,656
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TCF7
transcription factor 7
acts_upstream_of_or_within
ISO
(PMID:9462507)
MGI
PMID:9462507
NCBI chr 2:136,422,740...136,456,323
Ensembl chr 2:136,422,940...136,457,910
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ATM
ATM serine/threonine kinase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23836881)
Ensembl MGI
PMID:23836881
GO_REF:0000107
NCBI chr 9:36,620,656...36,759,555
Ensembl chr 9:36,620,657...36,759,552
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DCAF1
DDB1 and CUL4 associated factor 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr13:33,670,976...33,750,872
Ensembl chr13:33,670,977...33,750,772
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DCLRE1C
DNA cross-link repair 1C
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23836881)
Ensembl MGI
PMID:23836881
GO_REF:0000107
NCBI chr10:46,820,016...46,863,848
Ensembl chr10:46,820,053...46,868,028
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HMGB1
high mobility group box 1
involved_in
ISO
(PMID:9166431)
UniProt
PMID:9166431
NCBI chr11:7,195,556...7,321,071
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LIG1
DNA ligase 1
NOT|involved_in
ISO
(PMID:9809069)
UniProt
PMID:9809069
NCBI chr 6:53,620,483...53,660,020
Ensembl chr 6:53,620,483...53,686,562
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LIG3
DNA ligase 3
NOT|involved_in
ISO
(PMID:9809069)
UniProt
PMID:9809069
NCBI chr12:40,153,105...40,205,077
Ensembl chr12:40,153,397...40,183,622
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LIG4
DNA ligase 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15194694) (PMID:10716994)
Ensembl MGI
PMID:10716994 PMID:15194694
GO_REF:0000107
NCBI chr11:75,537,027...75,547,711
Ensembl chr11:75,537,036...75,547,716
G
PRKDC
protein kinase, DNA-activated, catalytic subunit
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23836881)
Ensembl MGI
PMID:23836881
GO_REF:0000107
NCBI chr 4:79,687,375...79,850,146
Ensembl chr 4:79,687,375...79,846,656
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RAG1
recombination activating 1
involved_in acts_upstream_of_or_within
IEA ISO IBA ISS
(PMID:2360047)
Ensembl MGI GO_Central UniProt InterPro
PMID:2360047
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107
NCBI chr 2:24,565,447...24,573,853
Ensembl chr 2:24,561,156...24,573,851
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RAG2
recombination activating 2
involved_in acts_upstream_of_or_within
IEA ISO IBA
(PMID:2360047)
Ensembl MGI GO_Central
PMID:2360047
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:24,547,605...24,553,944
Ensembl chr 2:24,547,644...24,558,403
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VCAN
versican
acts_upstream_of_or_within
ISO
(PMID:10716994)
MGI
PMID:10716994
NCBI chr 2:91,358,348...91,643,697
Ensembl chr 2:91,384,391...91,811,208
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XRCC6
X-ray repair cross complementing 6
acts_upstream_of_or_within
ISO
(PMID:10716994)
MGI
PMID:10716994
NCBI chr 5:6,903,496...6,929,162
Ensembl chr 5:6,903,495...6,929,052
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