ONTOLOGY REPORT - ANNOTATIONS
Term: somatic diversification of immune receptors
Accession: GO:0002200
browse the term
Definition: The somatic process allowing for the production of immune receptors whose specificity is not encoded in the germline genomic sequences.
Comment: Note that this process covers somatic recombination, gene conversion, hypermutation, N-region addition, and alternate splicing processes of immune receptor diversification.
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Ezh2
enhancer of zeste 2 polycomb repressive complex 2 subunit
involved_in
TAS
(PMID:23531880)
MGI
PMID:23531880
NCBI chr 6:47,507,208...47,613,843
Ensembl chr 6:47,507,073...47,572,275
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Polb
polymerase (DNA directed), beta
acts_upstream_of_or_within
IMP
(PMID:24388753)
MGI
PMID:24388753
NCBI chr 8:23,118,135...23,143,482
Ensembl chr 8:23,118,142...23,143,451
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Yy1
YY1 transcription factor
involved_in
IMP
(PMID:23531880)
MGI
PMID:23531880
NCBI chr12:108,758,841...108,786,074
Ensembl chr12:108,758,899...108,786,074
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Cyren
cell cycle regulator of NHEJ
involved_in
IMP
(PMID:30017584), (PMID:31795137)
UniProt
PMID:30017584 PMID:31795137
NCBI chr 6:34,848,706...34,855,024
Ensembl chr 6:34,848,706...34,854,995
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Foxp1
forkhead box P1
acts_upstream_of_or_within
IMP
(PMID:16819554)
MGI
PMID:16819554
NCBI chr 6:98,902,303...99,510,587
Ensembl chr 6:98,902,299...99,499,682
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Lig4
ligase IV, DNA, ATP-dependent
involved_in acts_upstream_of_or_within
IBA IMP
(PMID:9823897)
GO_Central MGI
PMID:9823897
GO_REF:0000033
NCBI chr 8:10,020,020...10,027,680
Ensembl chr 8:10,019,049...10,027,686
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Nhej1
non-homologous end joining factor 1
involved_in
ISS ISO
UniProt GO_Central
GO_REF:0000024 GO_REF:0000119
NCBI chr 1:75,006,505...75,101,870
Ensembl chr 1:75,006,298...75,101,844
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Prkdc
protein kinase, DNA activated, catalytic polypeptide
acts_upstream_of_or_within involved_in
IMP IBA
(PMID:9768755)
MGI GO_Central
PMID:9768755
GO_REF:0000033
NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099
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Tcf3
transcription factor 3
acts_upstream_of_or_within involved_in
IMP IBA ISO
(PMID:16428437)
MGI GO_Central
PMID:16428437
GO_REF:0000033
NCBI chr10:80,245,375...80,269,814
Ensembl chr10:80,245,348...80,269,481
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Xrcc4
X-ray repair complementing defective repair in Chinese hamster cells 4
acts_upstream_of_or_within involved_in
IMP IBA
(PMID:9875844)
MGI GO_Central
PMID:9875844
GO_REF:0000033
NCBI chr13:89,997,033...90,237,727
Ensembl chr13:89,922,146...90,237,727
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Aicda
activation-induced cytidine deaminase
acts_upstream_of_or_within involved_in
IMP
(PMID:17713479) (PMID:21518874)
MGI UniProt
PMID:17713479 PMID:21518874
NCBI chr 6:122,530,768...122,541,139
Ensembl chr 6:122,530,760...122,541,139
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Atad5
ATPase family, AAA domain containing 5
acts_upstream_of
IMP
(PMID:25404367)
MGI
PMID:25404367
NCBI chr11:79,980,205...80,026,623
Ensembl chr11:79,980,226...80,026,620
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Batf
basic leucine zipper transcription factor, ATF-like
involved_in
IMP
(PMID:20421391), (PMID:21572431)
UniProt
PMID:20421391 PMID:21572431
NCBI chr12:85,733,494...85,755,861
Ensembl chr12:85,733,443...85,755,861
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Cd40lg
CD40 ligand
involved_in
IDA
(PMID:7529792)
UniProt
PMID:7529792
NCBI chr X:56,257,448...56,269,402
Ensembl chr X:56,257,503...56,269,402
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Ercc1
excision repair cross-complementing rodent repair deficiency, complementation group 1
acts_upstream_of_or_within
IMP
(PMID:15280420)
MGI
PMID:15280420
NCBI chr 7:19,079,016...19,090,449
Ensembl chr 7:19,078,703...19,090,449
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Exo1
exonuclease 1
acts_upstream_of_or_within
IMP
(PMID:14716311)
MGI
PMID:14716311
NCBI chr 1:175,708,334...175,738,962
Ensembl chr 1:175,708,147...175,741,055
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Exosc3
exosome component 3
involved_in
IMP
(PMID:21255825)
UniProt
PMID:21255825
NCBI chr 4:45,316,613...45,320,616
Ensembl chr 4:45,316,613...45,342,732
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Exosc6
exosome component 6
involved_in
IMP
(PMID:21255825)
UniProt
PMID:21255825
NCBI chr 8:111,782,971...111,784,296
Ensembl chr 8:111,782,971...111,784,296
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Icosl
icos ligand
involved_in
NAS
(PMID:11343122)
UniProt
PMID:11343122
NCBI chr10:77,904,921...77,915,359
Ensembl chr10:77,905,136...77,919,747
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Lig4
ligase IV, DNA, ATP-dependent
acts_upstream_of_or_within
IMP
(PMID:17713479)
MGI
PMID:17713479
NCBI chr 8:10,020,020...10,027,680
Ensembl chr 8:10,019,049...10,027,686
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Mlh1
mutL homolog 1
acts_upstream_of_or_within
IMP
(PMID:12743174)
MGI
PMID:12743174
NCBI chr 9:111,057,296...111,100,854
Ensembl chr 9:111,057,296...111,100,859
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Msh2
mutS homolog 2
acts_upstream_of_or_within
IMP
(PMID:10430621) (PMID:12743174)
MGI
PMID:10430621 PMID:12743174
NCBI chr17:87,979,960...88,031,141
Ensembl chr17:87,979,758...88,031,141
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Msh6
mutS homolog 6
acts_upstream_of_or_within
IGI IMP
(PMID:17015724) (PMID:16618598)
MGI
PMID:16618598 PMID:17015724
NCBI chr17:88,282,478...88,298,320
Ensembl chr17:88,282,490...88,298,320
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Nbn
nibrin
involved_in
IDA
(PMID:15668383)
UniProt
PMID:15668383
NCBI chr 4:15,955,388...15,992,589
Ensembl chr 4:15,957,925...15,992,589
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Nfkbiz
nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta
involved_in
IMP
(PMID:25124037) (PMID:31182790)
MGI
PMID:25124037 PMID:31182790
NCBI chr16:55,631,740...55,659,018
Ensembl chr16:55,631,738...55,659,262
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Pcyt1a
phosphate cytidylyltransferase 1, choline, alpha isoform
involved_in
IMP
(PMID:19139091)
UniProt
PMID:19139091
NCBI chr16:32,249,739...32,293,883
Ensembl chr16:32,249,739...32,293,888
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Rnf168
ring finger protein 168
involved_in
IMP
(PMID:20080757)
UniProt
PMID:20080757
NCBI chr16:32,096,279...32,120,260
Ensembl chr16:32,096,277...32,120,252
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Rnf8
ring finger protein 8
involved_in
IMP
(PMID:20080757)
UniProt
PMID:20080757
NCBI chr17:29,833,763...29,860,638
Ensembl chr17:29,833,764...29,863,965
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Sanbr
SANT and BTB domain regulator of CSR
involved_in
IDA IBA
(PMID:33831416)
UniProt GO_Central
PMID:33831416
GO_REF:0000033
NCBI chr11:23,514,949...23,596,409
Ensembl chr11:23,514,961...23,583,631
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Swap70
SWA-70 protein
acts_upstream_of_or_within
IDA
(PMID:9642267)
MGI
PMID:9642267
NCBI chr 7:109,820,890...109,882,720
Ensembl chr 7:109,820,918...109,882,713
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Ung
uracil DNA glycosylase
acts_upstream_of_or_within
IGI
(PMID:17015724)
MGI
PMID:17015724
NCBI chr 5:114,268,427...114,277,382
Ensembl chr 5:114,268,447...114,277,384
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Xrcc4
X-ray repair complementing defective repair in Chinese hamster cells 4
acts_upstream_of_or_within
IMP
(PMID:17713479)
MGI
PMID:17713479
NCBI chr13:89,997,033...90,237,727
Ensembl chr13:89,922,146...90,237,727
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Ccr6
C-C motif chemokine receptor 6
involved_in
IMP
(PMID:27174992)
UniProt
PMID:27174992
NCBI chr17:8,454,875...8,477,353
Ensembl chr17:8,454,875...8,475,973
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Fdcsp
follicular dendritic cell secreted protein
acts_upstream_of_positive_effect
IMP
(PMID:17548624)
MGI
PMID:17548624
NCBI chr 5:88,056,638...88,062,030
Ensembl chr 5:88,056,638...88,062,030
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Bcl6
B cell leukemia/lymphoma 6
acts_upstream_of
IMP IGI
(PMID:10490661)
MGI
PMID:10490661
NCBI chr16:23,780,058...23,807,602
Ensembl chr16:23,783,802...23,807,602
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Fdcsp
follicular dendritic cell secreted protein
acts_upstream_of_or_within_negative_effect
IMP
(PMID:17548624)
MGI
PMID:17548624
NCBI chr 5:88,056,638...88,062,030
Ensembl chr 5:88,056,638...88,062,030
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Foxp3
forkhead box P3
acts_upstream_of
IMP
(PMID:16275384)
MGI
PMID:16275384
NCBI chr X:7,445,915...7,461,482
Ensembl chr X:7,439,883...7,461,484
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Il4
interleukin 4
acts_upstream_of
IDA
(PMID:14988498)
MGI
PMID:14988498
NCBI chr11:53,503,287...53,509,492
Ensembl chr11:53,493,809...53,509,496
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Stat6
signal transducer and activator of transcription 6
acts_upstream_of
IGI
(PMID:10490661)
MGI
PMID:10490661
NCBI chr10:127,478,855...127,496,856
Ensembl chr10:127,478,855...127,496,826
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Fdcsp
follicular dendritic cell secreted protein
acts_upstream_of_or_within_negative_effect
IMP
(PMID:17548624)
MGI
PMID:17548624
NCBI chr 5:88,056,638...88,062,030
Ensembl chr 5:88,056,638...88,062,030
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Hspd1
heat shock protein 1 (chaperonin)
involved_in
IEA ISO
Ensembl GO_Central
GO_REF:0000107 GO_REF:0000119
NCBI chr 1:55,116,992...55,127,402
Ensembl chr 1:55,116,994...55,127,402
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Il4
interleukin 4
acts_upstream_of
IDA
(PMID:14988498)
MGI
PMID:14988498
NCBI chr11:53,503,287...53,509,492
Ensembl chr11:53,493,809...53,509,496
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Parp3
poly (ADP-ribose) polymerase family, member 3
involved_in
IMP
(PMID:26000965)
UniProt
PMID:26000965
NCBI chr 9:106,347,521...106,354,148
Ensembl chr 9:106,347,521...106,354,148
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Bcl6
B cell leukemia/lymphoma 6
acts_upstream_of_or_within
IMP IGI
(PMID:10490661)
MGI
PMID:10490661
NCBI chr16:23,780,058...23,807,602
Ensembl chr16:23,783,802...23,807,602
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Foxp3
forkhead box P3
acts_upstream_of_or_within
IMP
(PMID:16275384)
MGI
PMID:16275384
NCBI chr X:7,445,915...7,461,482
Ensembl chr X:7,439,883...7,461,484
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Ndfip1
Nedd4 family interacting protein 1
acts_upstream_of_or_within
IMP
(PMID:17137798)
MGI
PMID:17137798
NCBI chr18:38,551,960...38,598,250
Ensembl chr18:38,543,449...38,598,356
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Tnfsf4
tumor necrosis factor (ligand) superfamily, member 4
involved_in
IMP
(PMID:12496423)
BHF-UCL
PMID:12496423
NCBI chr 1:161,223,009...161,245,777
Ensembl chr 1:161,222,980...161,245,981
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Exosc3
exosome component 3
acts_upstream_of_or_within
IMP
(PMID:21255825)
MGI
PMID:21255825
NCBI chr 4:45,316,613...45,320,616
Ensembl chr 4:45,316,613...45,342,732
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Exosc6
exosome component 6
acts_upstream_of_or_within
IMP
(PMID:21255825)
MGI
PMID:21255825
NCBI chr 8:111,782,971...111,784,296
Ensembl chr 8:111,782,971...111,784,296
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Hmces
5-hydroxymethylcytosine (hmC) binding, ES cell specific
involved_in
IDA
(PMID:31806351)
UniProt
PMID:31806351
NCBI chr 6:87,890,889...87,913,603
Ensembl chr 6:87,890,917...87,913,611
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Kmt5b
lysine methyltransferase 5B
involved_in
IMP
(PMID:28114273)
UniProt
PMID:28114273
NCBI chr19:3,816,436...3,868,303
Ensembl chr19:3,817,421...3,868,303
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Kmt5c
lysine methyltransferase 5C
involved_in
IMP
(PMID:28114273)
UniProt
PMID:28114273
NCBI chr 7:4,743,091...4,750,513
Ensembl chr 7:4,743,114...4,750,513
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Mad2l2
MAD2 mitotic arrest deficient-like 2
involved_in
ISO IEA
GO_Central Ensembl
GO_REF:0000107 GO_REF:0000119
NCBI chr 4:148,214,615...148,230,161
Ensembl chr 4:148,214,841...148,230,156
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Paxip1
PAX interacting (with transcription-activation domain) protein 1
involved_in
IMP
(PMID:20671152)
UniProt
PMID:20671152
NCBI chr 5:27,947,044...27,999,326
Ensembl chr 5:27,945,078...27,996,689
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Rif1
replication timing regulatory factor 1
involved_in
IMP
(PMID:23306439), (PMID:23333305), (PMID:23333306)
UniProt
PMID:23306439 PMID:23333305 PMID:23333306
NCBI chr 2:51,962,725...52,016,781
Ensembl chr 2:51,962,844...52,012,395
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Shld1
shieldin complex subunit 1
involved_in
IBA IEA ISO
GO_Central Ensembl
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119
NCBI chr 2:132,528,871...132,592,975
Ensembl chr 2:132,528,851...132,592,975
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Shld2
shieldin complex subunit 2
involved_in
IEA ISO
Ensembl GO_Central
GO_REF:0000107 GO_REF:0000119
NCBI chr14:33,958,905...34,032,528
Ensembl chr14:33,958,990...34,032,450
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Shld3
shieldin complex subunit 3
involved_in
IBA ISO IEA
GO_Central Ensembl
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119
NCBI chr13:104,310,228...104,314,967
Ensembl chr13:104,310,230...104,314,947
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Tfrc
transferrin receptor
involved_in
ISO ISS
GO_Central UniProt
GO_REF:0000024 GO_REF:0000119
NCBI chr16:32,427,714...32,451,612
Ensembl chr16:32,427,738...32,451,612
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Trp53bp1
transformation related protein 53 binding protein 1
involved_in
IMP ISO
(PMID:15077110), (PMID:15159415)
UniProt GO_Central
PMID:15077110 PMID:15159415
GO_REF:0000119
NCBI chr 2:121,025,316...121,126,830
Ensembl chr 2:121,023,762...121,101,888
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Mlh1
mutL homolog 1
involved_in
IMP
(PMID:10430621)
CAFA
PMID:10430621
NCBI chr 9:111,057,296...111,100,854
Ensembl chr 9:111,057,296...111,100,859
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Msh2
mutS homolog 2
involved_in
IMP
(PMID:10430621)
CAFA
PMID:10430621
NCBI chr17:87,979,960...88,031,141
Ensembl chr17:87,979,758...88,031,141
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Nsd2
nuclear receptor binding SET domain protein 2
acts_upstream_of_or_within
IMP
(PMID:23241889)
MGI
PMID:23241889
NCBI chr 5:33,974,286...34,055,310
Ensembl chr 5:33,978,069...34,055,319
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Pms2
PMS1 homolog2, mismatch repair system component
involved_in
IMP IGI
(PMID:10430621)
CAFA
PMID:10430621
NCBI chr 5:143,846,379...143,922,538
Ensembl chr 5:143,846,782...143,870,786 Ensembl chr 5:143,846,782...143,870,786
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Tgfb1
transforming growth factor, beta 1
acts_upstream_of_or_within involved_in
ISO ISS
(PMID:14988498)
MGI AgBase
PMID:14988498
GO_REF:0000024
NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502
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Tnfsf13
tumor necrosis factor (ligand) superfamily, member 13
acts_upstream_of_or_within involved_in
IMP IBA ISO
(PMID:14988498)
MGI GO_Central
PMID:14988498
GO_REF:0000033
NCBI chr11:69,573,403...69,576,380
Ensembl chr11:69,573,672...69,576,610
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Clcf1
cardiotrophin-like cytokine factor 1
involved_in
IDA
(PMID:12023368)
BHF-UCL
PMID:12023368
NCBI chr19:4,264,479...4,273,548
Ensembl chr19:4,264,292...4,273,544
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Il4
interleukin 4
acts_upstream_of_or_within
IDA
(PMID:14988498)
MGI
PMID:14988498
NCBI chr11:53,503,287...53,509,492
Ensembl chr11:53,493,809...53,509,496
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Stat6
signal transducer and activator of transcription 6
acts_upstream_of_or_within
IGI
(PMID:10490661)
MGI
PMID:10490661
NCBI chr10:127,478,855...127,496,856
Ensembl chr10:127,478,855...127,496,826
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Atad5
ATPase family, AAA domain containing 5
acts_upstream_of_or_within
IMP
(PMID:25404367)
MGI
PMID:25404367
NCBI chr11:79,980,205...80,026,623
Ensembl chr11:79,980,226...80,026,620
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Cd28
CD28 antigen
acts_upstream_of_or_within
IMP
(PMID:7688139)
MGI
PMID:7688139
NCBI chr 1:60,785,547...60,812,521
Ensembl chr 1:60,755,959...60,812,518
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Cd40
CD40 antigen
acts_upstream_of_or_within
IDA
(PMID:12882831)
MGI
PMID:12882831
NCBI chr 2:164,897,535...164,913,574
Ensembl chr 2:164,897,547...164,914,868
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Ifng
interferon gamma
acts_upstream_of_or_within
IDA
(PMID:12882831)
MGI
PMID:12882831
NCBI chr10:118,276,951...118,281,799
Ensembl chr10:118,276,951...118,281,797
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Il2
interleukin 2
acts_upstream_of_or_within
IMP
(PMID:1830926)
MGI
PMID:1830926
NCBI chr 3:37,174,862...37,180,103
Ensembl chr 3:37,174,672...37,180,108
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Il4
interleukin 4
acts_upstream_of_or_within
IDA
(PMID:12882831), (PMID:14988498)
MGI
PMID:12882831 PMID:14988498
NCBI chr11:53,503,287...53,509,492
Ensembl chr11:53,493,809...53,509,496
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Mlh1
mutL homolog 1
involved_in
IMP
(PMID:10430621)
CAFA
PMID:10430621
NCBI chr 9:111,057,296...111,100,854
Ensembl chr 9:111,057,296...111,100,859
G
Msh2
mutS homolog 2
involved_in
IMP
(PMID:10430621)
CAFA
PMID:10430621
NCBI chr17:87,979,960...88,031,141
Ensembl chr17:87,979,758...88,031,141
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Pagr1a
PAXIP1 associated glutamate rich protein 1A
involved_in
IMP
(PMID:26744420)
UniProt
PMID:26744420
NCBI chr 7:126,614,223...126,616,524
Ensembl chr 7:126,614,205...126,616,524 Ensembl chr 7:126,614,205...126,616,524
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Paxip1
PAX interacting (with transcription-activation domain) protein 1
involved_in
IMP
(PMID:26744420)
UniProt
PMID:26744420
NCBI chr 5:27,947,044...27,999,326
Ensembl chr 5:27,945,078...27,996,689
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Pms2
PMS1 homolog2, mismatch repair system component
involved_in
IGI IMP
(PMID:10430621)
CAFA
PMID:10430621
NCBI chr 5:143,846,379...143,922,538
Ensembl chr 5:143,846,782...143,870,786 Ensembl chr 5:143,846,782...143,870,786
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Ptprc
protein tyrosine phosphatase receptor type C
acts_upstream_of_or_within
IMP
(PMID:9015183)
MGI
PMID:9015183
NCBI chr 1:137,990,601...138,103,491
Ensembl chr 1:137,990,599...138,103,446
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Tbx21
T-box 21
acts_upstream_of_or_within
IMP
(PMID:12882831)
MGI
PMID:12882831
NCBI chr11:96,988,833...97,006,157
Ensembl chr11:96,988,897...97,006,157
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Aplf
aprataxin and PNKP like factor
acts_upstream_of_or_within
IMP
(PMID:21211721)
MGI
PMID:21211721
NCBI chr 6:87,605,407...87,649,244
Ensembl chr 6:87,605,406...87,649,175
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Mir181b-1
microRNA 181b-1
acts_upstream_of_or_within
IDA
(PMID:18762567)
MGI
PMID:18762567
NCBI chr 1:137,894,377...137,894,456
Ensembl chr 1:137,894,377...137,894,456
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Mir181b-2
microRNA 181b-2
acts_upstream_of_or_within
IDA
(PMID:18762567)
MGI
PMID:18762567
NCBI chr 2:38,743,842...38,743,930
Ensembl chr 2:38,743,842...38,743,930
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Supt6
SPT6, histone chaperone and transcription elongation factor
involved_in
IMP
(PMID:21518874)
UniProt
PMID:21518874
NCBI chr11:78,097,575...78,136,798
Ensembl chr11:78,097,572...78,136,813
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Foxp3
forkhead box P3
acts_upstream_of_or_within
IMP
(PMID:16275384)
MGI
PMID:16275384
NCBI chr X:7,445,915...7,461,482
Ensembl chr X:7,439,883...7,461,484
G
Il27ra
interleukin 27 receptor, alpha
acts_upstream_of_or_within
IMP
(PMID:11057672)
MGI
PMID:11057672
NCBI chr 8:84,756,915...84,769,250
Ensembl chr 8:84,756,923...84,769,218
G
Ndfip1
Nedd4 family interacting protein 1
acts_upstream_of_or_within
IMP
(PMID:17137798)
MGI
PMID:17137798
NCBI chr18:38,551,960...38,598,250
Ensembl chr18:38,543,449...38,598,356
G
Slc15a4
solute carrier family 15, member 4
involved_in
IMP
(PMID:25310967)
UniProt
PMID:25310967
NCBI chr 5:127,668,795...127,710,356
Ensembl chr 5:127,672,728...127,709,961
G
Adar
adenosine deaminase, RNA-specific
acts_upstream_of_or_within
IDA
(PMID:23209284)
MGI
PMID:23209284
NCBI chr 3:89,622,321...89,660,756
Ensembl chr 3:89,622,329...89,660,753
G
Aicda
activation-induced cytidine deaminase
involved_in
ISO
GO_Central
GO_REF:0000119
NCBI chr 6:122,530,768...122,541,139
Ensembl chr 6:122,530,760...122,541,139
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Ctnnbl1
catenin, beta like 1
involved_in
IEA ISO
Ensembl GO_Central
GO_REF:0000107 GO_REF:0000119
NCBI chr 2:157,579,321...157,733,823
Ensembl chr 2:157,579,321...157,733,534
G
Polb
polymerase (DNA directed), beta
acts_upstream_of_or_within
IMP
(PMID:24388753)
MGI
PMID:24388753
NCBI chr 8:23,118,135...23,143,482
Ensembl chr 8:23,118,142...23,143,451
G
Mad2l2
MAD2 mitotic arrest deficient-like 2
involved_in
NAS
(PMID:29656893)
ComplexPortal
PMID:29656893
NCBI chr 4:148,214,615...148,230,161
Ensembl chr 4:148,214,841...148,230,156
G
Shld1
shieldin complex subunit 1
involved_in
NAS
(PMID:29656893)
ComplexPortal
PMID:29656893
NCBI chr 2:132,528,871...132,592,975
Ensembl chr 2:132,528,851...132,592,975
G
Shld2
shieldin complex subunit 2
involved_in
NAS
(PMID:29656893)
ComplexPortal
PMID:29656893
NCBI chr14:33,958,905...34,032,528
Ensembl chr14:33,958,990...34,032,450
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Shld3
shieldin complex subunit 3
involved_in
NAS
(PMID:29656893)
ComplexPortal
PMID:29656893
NCBI chr13:104,310,228...104,314,967
Ensembl chr13:104,310,230...104,314,947
G
Aicda
activation-induced cytidine deaminase
involved_in
ISO ISS
GO_Central UniProt
GO_REF:0000024 GO_REF:0000119
NCBI chr 6:122,530,768...122,541,139
Ensembl chr 6:122,530,760...122,541,139
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Exo1
exonuclease 1
acts_upstream_of_or_within
IMP
(PMID:14716311)
MGI
PMID:14716311
NCBI chr 1:175,708,334...175,738,962
Ensembl chr 1:175,708,147...175,741,055
G
Hmces
5-hydroxymethylcytosine (hmC) binding, ES cell specific
involved_in
ISO IDA
(PMID:35450882)
GO_Central UniProt
PMID:35450882
GO_REF:0000119
NCBI chr 6:87,890,889...87,913,603
Ensembl chr 6:87,890,917...87,913,611
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Ighd
immunoglobulin heavy constant delta
acts_upstream_of_or_within
IMP
(PMID:8418208)
MGI
PMID:8418208
NCBI chr12:113,371,155...113,379,944
Ensembl chr12:113,370,224...113,379,944
G
Mcm3ap
minichromosome maintenance complex component 3 associated protein
involved_in
ISS ISO
UniProt GO_Central
GO_REF:0000024 GO_REF:0000119
NCBI chr10:76,304,736...76,351,693
Ensembl chr10:76,304,761...76,351,691
G
Mlh1
mutL homolog 1
involved_in acts_upstream_of_or_within
IBA IMP
(PMID:10092760), (PMID:10429667)
GO_Central MGI
PMID:10092760 PMID:10429667
GO_REF:0000033
NCBI chr 9:111,057,296...111,100,854
Ensembl chr 9:111,057,296...111,100,859
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Msh2
mutS homolog 2
acts_upstream_of_or_within NOT|acts_upstream_of_or_within
IMP IGI
(PMID:9607916) (PMID:14568978) (PMID:9607915) (PMID:9697842), (PMID:9697843) (PMID:15494304)
MGI
PMID:9607915 PMID:9607916 PMID:9697842 PMID:9697843 PMID:14568978 PMID:15494304 More...
NCBI chr17:87,979,960...88,031,141
Ensembl chr17:87,979,758...88,031,141
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Msh3
mutS homolog 3
NOT|acts_upstream_of_or_within
IMP
(PMID:10662804)
MGI
PMID:10662804
NCBI chr13:92,348,387...92,491,515
Ensembl chr13:92,348,380...92,491,511
G
Msh6
mutS homolog 6
acts_upstream_of_or_within
IMP
(PMID:10662804), (PMID:15238604), (PMID:17015724) (PMID:16618598)
MGI
PMID:10662804 PMID:15238604 PMID:16618598 PMID:17015724
NCBI chr17:88,282,478...88,298,320
Ensembl chr17:88,282,490...88,298,320
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Nuggc
nuclear GTPase, germinal center associated
acts_upstream_of_or_within
IMP
(PMID:22833677)
MGI
PMID:22833677
NCBI chr14:65,830,901...65,885,893
Ensembl chr14:65,835,995...65,885,980
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Pms2
PMS1 homolog2, mismatch repair system component
involved_in acts_upstream_of_or_within
IBA IMP
(PMID:9618520) (PMID:10429667)
GO_Central CAFA MGI
PMID:9618520 PMID:10429667
GO_REF:0000033
NCBI chr 5:143,846,379...143,922,538
Ensembl chr 5:143,846,782...143,870,786 Ensembl chr 5:143,846,782...143,870,786
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Polb
polymerase (DNA directed), beta
acts_upstream_of_or_within
IMP
(PMID:24388753)
MGI
PMID:24388753
NCBI chr 8:23,118,135...23,143,482
Ensembl chr 8:23,118,142...23,143,451
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Polm
polymerase (DNA directed), mu
acts_upstream_of_or_within
IMP
(PMID:15789338)
MGI
PMID:15789338
NCBI chr11:5,777,860...5,788,831
Ensembl chr11:5,777,860...5,788,016
G
Polq
polymerase (DNA directed), theta
involved_in
IMP
(PMID:16172387), (PMID:16222339), (PMID:16890500)
UniProt
PMID:16172387 PMID:16222339 PMID:16890500
NCBI chr16:36,832,104...36,922,321
Ensembl chr16:36,832,148...36,915,779
G
Samhd1
SAM domain and HD domain, 1
involved_in
IMP
(PMID:29669924)
UniProt
PMID:29669924
NCBI chr 2:156,939,454...156,977,016
Ensembl chr 2:156,939,453...156,977,185
G
Ung
uracil DNA glycosylase
acts_upstream_of_or_within
IGI IMP
(PMID:15494304) (PMID:17015724)
MGI
PMID:15494304 PMID:17015724
NCBI chr 5:114,268,427...114,277,382
Ensembl chr 5:114,268,447...114,277,384
G
Mlh1
mutL homolog 1
acts_upstream_of_or_within
IMP
(PMID:11828012)
MGI
PMID:11828012
NCBI chr 9:111,057,296...111,100,854
Ensembl chr 9:111,057,296...111,100,859
G
Msh2
mutS homolog 2
acts_upstream_of_or_within
IGI IMP
(PMID:15494304) (PMID:14563316), (PMID:15955838) (PMID:11828012) (PMID:14568978)
MGI
PMID:11828012 PMID:14563316 PMID:14568978 PMID:15494304 PMID:15955838
NCBI chr17:87,979,960...88,031,141
Ensembl chr17:87,979,758...88,031,141
G
Msh3
mutS homolog 3
involved_in acts_upstream_of_or_within
IBA IMP
(PMID:15238604)
GO_Central MGI
PMID:15238604
GO_REF:0000033
NCBI chr13:92,348,387...92,491,515
Ensembl chr13:92,348,380...92,491,511
G
Msh6
mutS homolog 6
acts_upstream_of_or_within
IMP
(PMID:15238604)
MGI
PMID:15238604
NCBI chr17:88,282,478...88,298,320
Ensembl chr17:88,282,490...88,298,320
G
Pms2
PMS1 homolog2, mismatch repair system component
acts_upstream_of_or_within
IMP
(PMID:11828012)
MGI
PMID:11828012
NCBI chr 5:143,846,379...143,922,538
Ensembl chr 5:143,846,782...143,870,786 Ensembl chr 5:143,846,782...143,870,786
G
Ung
uracil DNA glycosylase
acts_upstream_of_or_within
IMP IGI
(PMID:15494304)
MGI
PMID:15494304
NCBI chr 5:114,268,427...114,277,382
Ensembl chr 5:114,268,447...114,277,384
G
Mlh1
mutL homolog 1
acts_upstream_of_or_within
IGI
(PMID:12743174)
MGI
PMID:12743174
NCBI chr 9:111,057,296...111,100,854
Ensembl chr 9:111,057,296...111,100,859
G
Msh2
mutS homolog 2
acts_upstream_of_or_within involved_in
IGI IBA
(PMID:12743174)
MGI GO_Central
PMID:12743174
GO_REF:0000033
NCBI chr17:87,979,960...88,031,141
Ensembl chr17:87,979,758...88,031,141
G
Bcl11b
B cell leukemia/lymphoma 11B
acts_upstream_of_or_within
IMP
(PMID:12717433)
MGI
PMID:12717433
NCBI chr12:107,876,662...107,970,404
Ensembl chr12:107,876,662...107,969,861
G
Lef1
lymphoid enhancer binding factor 1
acts_upstream_of_or_within
IGI
(PMID:9462507)
MGI
PMID:9462507
NCBI chr 3:130,903,972...131,018,006
Ensembl chr 3:130,904,120...131,018,005
G
Lig4
ligase IV, DNA, ATP-dependent
acts_upstream_of_or_within
IMP
(PMID:10911993)
MGI
PMID:10911993
NCBI chr 8:10,020,020...10,027,680
Ensembl chr 8:10,019,049...10,027,686
G
Prkdc
protein kinase, DNA activated, catalytic polypeptide
acts_upstream_of_or_within
IMP
(PMID:9768755)
MGI
PMID:9768755
NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099
G
Tcf7
transcription factor 7, T cell specific
acts_upstream_of_or_within
IGI
(PMID:9462507)
MGI
PMID:9462507
NCBI chr11:52,137,347...52,174,211
Ensembl chr11:52,143,198...52,174,158
G
Atm
ataxia telangiectasia mutated
acts_upstream_of_or_within
IGI
(PMID:23836881)
MGI
PMID:23836881
NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040
G
Dcaf1
DDB1 and CUL4 associated factor 1
involved_in
IMP
(PMID:22157821)
UniProt
PMID:22157821
NCBI chr 9:106,691,354...106,758,191
Ensembl chr 9:106,699,073...106,758,191
G
Dclre1c
DNA cross-link repair 1C
acts_upstream_of_or_within
IMP
(PMID:23836881)
MGI
PMID:23836881
NCBI chr 2:3,425,112...3,475,248
Ensembl chr 2:3,425,168...3,465,167
G
Hmgb1
high mobility group box 1
involved_in
ISO
GO_Central
GO_REF:0000119
NCBI chr 5:148,983,512...148,989,867
Ensembl chr 5:148,983,512...149,121,299
G
Lig1
ligase I, DNA, ATP-dependent
NOT|involved_in
ISO
(PMID:9809069)
UniProt
PMID:9809069
NCBI chr 7:13,011,101...13,045,351
Ensembl chr 7:13,011,239...13,045,350
G
Lig3
ligase III, DNA, ATP-dependent
NOT|involved_in
ISO
(PMID:9809069)
UniProt
PMID:9809069
NCBI chr11:82,671,977...82,695,100
Ensembl chr11:82,671,934...82,695,100
G
Lig4
ligase IV, DNA, ATP-dependent
acts_upstream_of_or_within involved_in
IMP ISO IDA
(PMID:10716994) (PMID:15194694)
MGI GO_Central
PMID:10716994 PMID:15194694
GO_REF:0000119
NCBI chr 8:10,020,020...10,027,680
Ensembl chr 8:10,019,049...10,027,686
G
Prkdc
protein kinase, DNA activated, catalytic polypeptide
acts_upstream_of_or_within
IGI
(PMID:23836881)
MGI
PMID:23836881
NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099
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Rag1
recombination activating 1
acts_upstream_of_or_within involved_in
IGI IBA ISO IMP
(PMID:2360047) (PMID:10601033), (PMID:1547488), (PMID:20122409), (PMID:8284210)
MGI GO_Central UniProt
PMID:1547488 PMID:2360047 PMID:8284210 PMID:10601033 PMID:20122409
GO_REF:0000033 GO_REF:0000119
NCBI chr 2:101,468,597...101,479,877
Ensembl chr 2:101,468,627...101,479,846
G
Rag2
recombination activating gene 2
involved_in acts_upstream_of_or_within
IBA IMP IGI
(PMID:1547488), (PMID:18033247) (PMID:2360047)
GO_Central UniProt MGI
PMID:1547488 PMID:2360047 PMID:18033247
GO_REF:0000033
NCBI chr 2:101,455,057...101,462,873
Ensembl chr 2:101,455,063...101,462,874
G
Xrcc4
X-ray repair complementing defective repair in Chinese hamster cells 4
acts_upstream_of_or_within
IMP
(PMID:10716994)
MGI
PMID:10716994
NCBI chr13:89,997,033...90,237,727
Ensembl chr13:89,922,146...90,237,727
G
Xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6
acts_upstream_of_or_within
IMP
(PMID:10716994)
MGI
PMID:10716994
NCBI chr15:81,868,805...81,924,286
Ensembl chr15:81,872,036...81,924,286
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