ONTOLOGY REPORT - ANNOTATIONS
Term: somatic diversification of immune receptors
Accession: GO:0002200
browse the term
Definition: The somatic process allowing for the production of immune receptors whose specificity is not encoded in the germline genomic sequences.
Comment: Note that this process covers somatic recombination, gene conversion, hypermutation, N-region addition, and alternate splicing processes of immune receptor diversification.
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POLB
DNA polymerase beta
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:24388753)
MGI Ensembl
PMID:24388753
GO_REF:0000107
NCBI chr 8:40,332,165...40,368,065
Ensembl chr 8:40,332,208...40,372,582
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YY1
YY1 transcription factor
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr24:78,199,172...78,243,081
Ensembl chr24:78,199,039...78,237,165
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CYREN
cell cycle regulator of NHEJ
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr21:103,838,218...103,843,151
Ensembl chr21:103,838,988...103,842,620
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FOXP1
forkhead box P1
acts_upstream_of_or_within
ISO
(PMID:16819554)
MGI
PMID:16819554
NCBI chr22:31,907,941...32,538,294
Ensembl chr22:31,912,460...32,154,502
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LIG4
DNA ligase 4
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:9823897)
MGI Ensembl TreeGrafter
PMID:9823897
GO_REF:0000107 GO_REF:0000118
NCBI chr 3:86,576,200...86,587,097
Ensembl chr 3:86,577,304...86,580,039
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NHEJ1
non-homologous end joining factor 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr10:104,981,313...105,071,828
Ensembl chr10:104,982,380...105,068,999
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PRKDC
protein kinase, DNA-activated, catalytic subunit
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9768755)
Ensembl TreeGrafter MGI
PMID:9768755
GO_REF:0000107 GO_REF:0000118
NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541
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TCF3
transcription factor 3
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:16428437)
MGI TreeGrafter Ensembl
PMID:16428437
GO_REF:0000107 GO_REF:0000118
NCBI chr 6:1,393,147...1,440,515
Ensembl chr 6:1,393,107...1,440,479
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XRCC4
X-ray repair cross complementing 4
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:9875844)
MGI TreeGrafter
PMID:9875844
GO_REF:0000118
NCBI chr 4:77,182,569...77,468,786
Ensembl chr 4:77,182,793...77,468,775
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AICDA
activation induced cytidine deaminase
acts_upstream_of_or_within involved_in
ISO
(PMID:17713479) (PMID:21518874)
MGI UniProt
PMID:17713479 PMID:21518874
NCBI chr11:8,426,920...8,438,331
Ensembl chr11:8,428,922...8,431,641
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ATAD5
ATPase family AAA domain containing 5
involved_in acts_upstream_of
IEA ISO
(PMID:25404367)
Ensembl MGI
PMID:25404367
GO_REF:0000107
NCBI chr16:25,536,911...25,597,911
Ensembl chr16:25,538,131...25,597,695
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BATF
basic leucine zipper ATF-like transcription factor
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr24:52,761,569...52,785,999
Ensembl chr24:52,761,651...52,785,978
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CD40LG
CD40 ligand
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr X:111,655,301...111,667,602
Ensembl chr X:111,655,397...111,666,639
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ERCC1
ERCC excision repair 1, endonuclease non-catalytic subunit
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15280420)
Ensembl MGI
PMID:15280420
GO_REF:0000107
NCBI chr 6:38,857,067...38,900,177
Ensembl chr 6:38,854,803...38,872,967
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EXO1
exonuclease 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:14716311)
MGI Ensembl
PMID:14716311
GO_REF:0000107
NCBI chr25:78,934,337...78,976,346
Ensembl chr25:78,934,459...78,976,219
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EXOSC3
exosome component 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr12:42,798,609...42,819,431
Ensembl chr12:42,799,067...42,803,471
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EXOSC6
exosome component 6
involved_in
ISO
(PMID:21255825)
UniProt
PMID:21255825
NCBI chr 5:53,397,973...53,399,526
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LIG4
DNA ligase 4
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:17713479)
MGI Ensembl
PMID:17713479
GO_REF:0000107
NCBI chr 3:86,576,200...86,587,097
Ensembl chr 3:86,577,304...86,580,039
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MLH1
mutL homolog 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12743174)
Ensembl MGI
PMID:12743174
GO_REF:0000107
NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393
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MSH2
mutS homolog 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12743174) (PMID:10430621)
Ensembl MGI
PMID:10430621 PMID:12743174
GO_REF:0000107
NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819
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MSH6
mutS homolog 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16618598) (PMID:17015724)
Ensembl MGI
PMID:16618598 PMID:17015724
GO_REF:0000107
NCBI chr14:59,375,602...59,400,252
Ensembl chr14:59,375,691...59,400,174
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NBN
nibrin
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:85,017,807...85,069,219
Ensembl chr 8:85,015,752...85,069,028
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NFKBIZ
NFKB inhibitor zeta
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr22:79,044,624...79,077,736
Ensembl chr22:79,044,619...79,055,776
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PCYT1A
phosphate cytidylyltransferase 1A, choline
involved_in
ISO
(PMID:19139091)
UniProt
PMID:19139091
NCBI chr15:90,905,691...90,944,485
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RNF168
ring finger protein 168
involved_in
ISO
(PMID:20080757)
UniProt
PMID:20080757
NCBI chr15:90,702,740...90,735,279
Ensembl chr15:90,702,765...90,737,687
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RNF8
ring finger protein 8
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr17:34,754,186...34,787,676
Ensembl chr17:34,751,945...34,787,632
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SANBR
SANT and BTB domain regulator of CSR
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr14:45,865,697...45,920,403
Ensembl chr14:45,864,838...45,920,782
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SWAP70
switching B cell complex subunit SWAP70
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:9642267)
MGI Ensembl
PMID:9642267
GO_REF:0000107
NCBI chr 1:55,074,255...55,156,632
Ensembl chr 1:55,074,209...55,156,599
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UNG
uracil DNA glycosylase
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:17015724)
MGI Ensembl
PMID:17015724
GO_REF:0000107
NCBI chr11:104,302,507...104,325,160
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XRCC4
X-ray repair cross complementing 4
acts_upstream_of_or_within
ISO
(PMID:17713479)
MGI
PMID:17713479
NCBI chr 4:77,182,569...77,468,786
Ensembl chr 4:77,182,793...77,468,775
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CCR6
C-C motif chemokine receptor 6
involved_in
ISO
(PMID:27174992)
UniProt
PMID:27174992
NCBI chr13:94,865,480...94,894,331
Ensembl chr13:94,865,936...94,894,315
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FDCSP
follicular dendritic cell secreted protein
acts_upstream_of_positive_effect
ISO
(PMID:17548624)
MGI
PMID:17548624
NCBI chr 7:18,711,145...18,721,926
Ensembl chr 7:18,716,973...18,721,350
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BCL6
BCL6 transcription repressor
involved_in acts_upstream_of
IEA ISO
(PMID:10490661)
Ensembl MGI
PMID:10490661
GO_REF:0000107
NCBI chr15:81,997,659...82,022,059
Ensembl chr15:81,998,545...82,009,946
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FDCSP
follicular dendritic cell secreted protein
acts_upstream_of_or_within_negative_effect
ISO
(PMID:17548624)
MGI
PMID:17548624
NCBI chr 7:18,711,145...18,721,926
Ensembl chr 7:18,716,973...18,721,350
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FOXP3
forkhead box P3
acts_upstream_of
ISO
(PMID:16275384)
MGI
PMID:16275384
NCBI chr X:46,349,890...46,365,133
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FOXP3
forkhead box P3
involved_in
IEA
Ensembl
GO_REF:0000107
Ensembl chr X:46,346,754...46,356,928
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IL4
interleukin 4
acts_upstream_of
ISO
(PMID:14988498)
MGI
PMID:14988498
NCBI chr23:35,492,158...35,501,349
Ensembl chr23:35,492,939...35,501,258
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STAT6
signal transducer and activator of transcription 6
involved_in acts_upstream_of
IEA ISO
(PMID:10490661)
Ensembl MGI
PMID:10490661
GO_REF:0000107
NCBI chr11:53,005,378...53,020,899
Ensembl chr11:53,006,145...53,021,203
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FDCSP
follicular dendritic cell secreted protein
acts_upstream_of_or_within_negative_effect
ISO
(PMID:17548624)
MGI
PMID:17548624
NCBI chr 7:18,711,145...18,721,926
Ensembl chr 7:18,716,973...18,721,350
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HSPD1
heat shock protein family D (Hsp60) member 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr10:83,003,266...83,017,397
Ensembl chr10:83,003,717...83,017,363
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IL4
interleukin 4
acts_upstream_of
ISO
(PMID:14988498)
MGI
PMID:14988498
NCBI chr23:35,492,158...35,501,349
Ensembl chr23:35,492,939...35,501,258
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LOC103238722
60 kDa heat shock protein, mitochondrial-like
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:66,923,204...66,925,397
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PARP3
poly(ADP-ribose) polymerase family member 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr22:13,310,885...13,316,807
Ensembl chr22:13,310,938...13,320,680
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FDCSP
follicular dendritic cell secreted protein
involved_in
ISO
(PMID:24399151)
MGI
PMID:24399151
NCBI chr 7:18,711,145...18,721,926
Ensembl chr 7:18,716,973...18,721,350
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BCL6
BCL6 transcription repressor
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10490661)
Ensembl MGI
PMID:10490661
GO_REF:0000107
NCBI chr15:81,997,659...82,022,059
Ensembl chr15:81,998,545...82,009,946
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FOXP3
forkhead box P3
acts_upstream_of_or_within
ISO
(PMID:16275384)
MGI
PMID:16275384
NCBI chr X:46,349,890...46,365,133
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FOXP3
forkhead box P3
involved_in
IEA
Ensembl
GO_REF:0000107
Ensembl chr X:46,346,754...46,356,928
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NDFIP1
Nedd4 family interacting protein 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17137798)
Ensembl MGI
PMID:17137798
GO_REF:0000107
NCBI chr23:44,737,432...44,783,409
Ensembl chr23:44,737,422...44,775,657
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TNFSF4
TNF superfamily member 4
involved_in
ISO
(PMID:12496423)
BHF-UCL
PMID:12496423
NCBI chr25:55,714,291...55,998,009
Ensembl chr25:55,974,691...55,997,374
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EXOSC3
exosome component 3
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:21255825)
MGI Ensembl
PMID:21255825
GO_REF:0000107
NCBI chr12:42,798,609...42,819,431
Ensembl chr12:42,799,067...42,803,471
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EXOSC6
exosome component 6
acts_upstream_of_or_within
ISO
(PMID:21255825)
MGI
PMID:21255825
NCBI chr 5:53,397,973...53,399,526
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HMCES
5-hydroxymethylcytosine binding, ES cell specific
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr22:51,759,776...51,785,902
Ensembl chr22:51,759,715...51,785,987
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KMT5B
lysine methyltransferase 5B
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:6,308,565...6,367,272
Ensembl chr 1:6,308,742...6,367,393
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KMT5C
lysine methyltransferase 5C
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:47,942,100...47,950,364
Ensembl chr 6:47,944,197...47,949,693
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MAD2L2
mitotic arrest deficient 2 like 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr20:120,099,928...120,115,954
Ensembl chr20:120,110,269...120,116,083
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PAXIP1
PAX interacting protein 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr21:123,095,968...123,156,157
Ensembl chr21:123,095,966...123,155,800
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RIF1
replication timing regulatory factor 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr10:36,845,751...36,937,040
Ensembl chr10:36,845,777...36,907,015
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SHLD1
shieldin complex subunit 1
involved_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chr 2:32,265,882...32,381,411
Ensembl chr 2:32,265,788...32,381,395
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SHLD2
shieldin complex subunit 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:44,565,105...44,652,926
Ensembl chr 9:44,564,792...44,605,562
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SHLD3
shieldin complex subunit 3
involved_in
ISO
(PMID:29656893)
UniProt
PMID:29656893
NCBI chr 4:61,817,386...61,823,423
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TFRC
transferrin receptor
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr15:91,102,153...91,134,994
Ensembl chr15:91,102,817...91,135,584
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TP53BP1
tumor protein p53 binding protein 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr26:39,489,925...39,595,096
Ensembl chr26:39,508,600...39,594,927
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LOC103242307
TNF superfamily member 13
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:14988498)
MGI TreeGrafter
PMID:14988498
GO_REF:0000118
NCBI chr16:6,935,073...6,938,792
Ensembl chr16:6,926,584...6,938,019
G
LOC103246803
mismatch repair endonuclease PMS2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr28:15,174,359...15,209,962
Ensembl chr28:15,172,100...15,209,852
G
MLH1
mutL homolog 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393
G
MSH2
mutS homolog 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819
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NSD2
nuclear receptor binding SET domain protein 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23241889)
Ensembl MGI
PMID:23241889
GO_REF:0000107
NCBI chr27:46,787,325...46,896,898
Ensembl chr27:46,787,154...46,867,792
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TGFB1
transforming growth factor beta 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:14988498)
MGI Ensembl
PMID:14988498
GO_REF:0000107
NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365
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CLCF1
cardiotrophin like cytokine factor 1
involved_in
ISO
(PMID:12023368)
BHF-UCL
PMID:12023368
NCBI chr 1:6,890,751...6,900,370
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CLCF1
cardiotrophin like cytokine factor 1
involved_in
IEA
Ensembl
GO_REF:0000107
Ensembl chr 1:6,896,591...6,899,396
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IL4
interleukin 4
acts_upstream_of_or_within
ISO
(PMID:14988498)
MGI
PMID:14988498
NCBI chr23:35,492,158...35,501,349
Ensembl chr23:35,492,939...35,501,258
G
STAT6
signal transducer and activator of transcription 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10490661)
Ensembl MGI
PMID:10490661
GO_REF:0000107
NCBI chr11:53,005,378...53,020,899
Ensembl chr11:53,006,145...53,021,203
G
ATAD5
ATPase family AAA domain containing 5
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:25404367)
Ensembl MGI
PMID:25404367
GO_REF:0000107
NCBI chr16:25,536,911...25,597,911
Ensembl chr16:25,538,131...25,597,695
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CD28
CD28 molecule
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:7688139)
MGI Ensembl
PMID:7688139
GO_REF:0000107
NCBI chr10:89,471,710...89,505,152
Ensembl chr10:89,471,730...89,500,387
G
CD40
CD40 molecule
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12882831)
Ensembl MGI
PMID:12882831
GO_REF:0000107
NCBI chr 2:17,753,713...17,765,134
Ensembl chr 2:17,753,394...17,764,566
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IFNG
interferon gamma
acts_upstream_of_or_within
ISO
(PMID:12882831)
MGI
PMID:12882831
NCBI chr11:63,785,493...63,791,071
Ensembl chr11:63,786,041...63,790,473
G
IL2
interleukin 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:1830926)
Ensembl MGI
PMID:1830926
GO_REF:0000107
NCBI chr 7:69,729,635...69,736,279
Ensembl chr 7:69,730,282...69,734,969
G
IL4
interleukin 4
acts_upstream_of_or_within
ISO
(PMID:12882831), (PMID:14988498)
MGI
PMID:12882831 PMID:14988498
NCBI chr23:35,492,158...35,501,349
Ensembl chr23:35,492,939...35,501,258
G
LOC103246803
mismatch repair endonuclease PMS2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr28:15,174,359...15,209,962
Ensembl chr28:15,172,100...15,209,852
G
MLH1
mutL homolog 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393
G
MSH2
mutS homolog 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819
G
PAGR1
PAXIP1 associated glutamate rich protein 1
involved_in
ISO
(PMID:26744420)
UniProt
PMID:26744420
NCBI chr 5:26,833,333...26,837,655
Ensembl chr 5:26,833,675...26,837,640
G
PAXIP1
PAX interacting protein 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr21:123,095,968...123,156,157
Ensembl chr21:123,095,966...123,155,800
G
PTPRC
protein tyrosine phosphatase receptor type C
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9015183)
Ensembl MGI
PMID:9015183
GO_REF:0000107
NCBI chr25:30,655,014...30,777,367
Ensembl chr25:30,653,044...30,777,303
G
TBX21
T-box transcription factor 21
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12882831)
Ensembl MGI
PMID:12882831
GO_REF:0000107
NCBI chr16:68,131,258...68,145,579
Ensembl chr16:68,131,536...68,144,415
G
APLF
aprataxin and PNKP like factor
acts_upstream_of_or_within
ISO
(PMID:21211721)
MGI
PMID:21211721
NCBI chr14:38,539,398...38,636,666
Ensembl chr14:38,540,084...38,636,569
G
SUPT6H
SPT6 homolog, histone chaperone and transcription elongation factor
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr16:22,444,864...22,470,248
G
FOXP3
forkhead box P3
acts_upstream_of_or_within
ISO
(PMID:16275384)
MGI
PMID:16275384
NCBI chr X:46,349,890...46,365,133
G
FOXP3
forkhead box P3
involved_in
IEA
Ensembl
GO_REF:0000107
Ensembl chr X:46,346,754...46,356,928
G
IL27RA
interleukin 27 receptor subunit alpha
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:11057672)
MGI Ensembl
PMID:11057672
GO_REF:0000107
NCBI chr 6:12,679,270...12,699,254
Ensembl chr 6:12,686,838...12,701,867
G
NDFIP1
Nedd4 family interacting protein 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17137798)
Ensembl MGI
PMID:17137798
GO_REF:0000107
NCBI chr23:44,737,432...44,783,409
Ensembl chr23:44,737,422...44,775,657
G
SLC15A4
solute carrier family 15 member 4
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:124,170,785...124,204,358
Ensembl chr11:124,169,732...124,204,200
G
ADAR
adenosine deaminase RNA specific
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23209284)
Ensembl MGI
PMID:23209284
GO_REF:0000107
NCBI chr20:9,194,611...9,241,102
Ensembl chr20:9,219,937...9,241,329
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AICDA
activation induced cytidine deaminase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:8,426,920...8,438,331
Ensembl chr11:8,428,922...8,431,641
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CTNNBL1
catenin beta like 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 2:25,877,750...26,055,283
Ensembl chr 2:25,877,700...26,055,209
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POLB
DNA polymerase beta
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:24388753)
MGI Ensembl
PMID:24388753
GO_REF:0000107
NCBI chr 8:40,332,165...40,368,065
Ensembl chr 8:40,332,208...40,372,582
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AICDA
activation induced cytidine deaminase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:8,426,920...8,438,331
Ensembl chr11:8,428,922...8,431,641
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EXO1
exonuclease 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:14716311)
MGI Ensembl
PMID:14716311
GO_REF:0000107
NCBI chr25:78,934,337...78,976,346
Ensembl chr25:78,934,459...78,976,219
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HMCES
5-hydroxymethylcytosine binding, ES cell specific
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr22:51,759,776...51,785,902
Ensembl chr22:51,759,715...51,785,987
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LOC103246803
mismatch repair endonuclease PMS2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:10429667)
MGI Ensembl TreeGrafter
PMID:10429667
GO_REF:0000107 GO_REF:0000118
NCBI chr28:15,174,359...15,209,962
Ensembl chr28:15,172,100...15,209,852
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MCM3AP
minichromosome maintenance complex component 3 associated protein
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 2:89,852,450...89,900,002
Ensembl chr 2:89,852,447...89,890,054
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MLH1
mutL homolog 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10092760), (PMID:10429667)
Ensembl TreeGrafter MGI
PMID:10092760 PMID:10429667
GO_REF:0000107 GO_REF:0000118
NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393
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MSH2
mutS homolog 2
involved_in acts_upstream_of_or_within NOT|acts_upstream_of_or_within
IEA ISO
(PMID:9697842), (PMID:9697843) (PMID:9607916) (PMID:15494304) (PMID:9607915) (PMID:14568978)
Ensembl MGI
PMID:9607915 PMID:9607916 PMID:9697842 PMID:9697843 PMID:14568978 PMID:15494304 More...
GO_REF:0000107
NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819
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MSH3
mutS homolog 3
NOT|acts_upstream_of_or_within
ISO
(PMID:10662804)
MGI
PMID:10662804
NCBI chr 4:74,811,181...75,032,067
Ensembl chr 4:74,811,198...75,032,005
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MSH6
mutS homolog 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10662804), (PMID:15238604), (PMID:17015724) (PMID:16618598)
Ensembl MGI
PMID:10662804 PMID:15238604 PMID:16618598 PMID:17015724
GO_REF:0000107
NCBI chr14:59,375,602...59,400,252
Ensembl chr14:59,375,691...59,400,174
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NUGGC
nuclear GTPase, germinal center associated
acts_upstream_of_or_within
ISO
(PMID:22833677)
MGI
PMID:22833677
NCBI chr 8:26,129,593...26,190,881
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POLB
DNA polymerase beta
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:24388753)
MGI Ensembl
PMID:24388753
GO_REF:0000107
NCBI chr 8:40,332,165...40,368,065
Ensembl chr 8:40,332,208...40,372,582
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POLM
DNA polymerase mu
acts_upstream_of_or_within
ISO
(PMID:15789338)
MGI
PMID:15789338
NCBI chr21:14,585,912...14,596,127
Ensembl chr21:14,586,164...14,599,248
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POLQ
DNA polymerase theta
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr22:59,336,506...59,448,609
Ensembl chr22:59,336,842...59,448,604
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SAMHD1
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
involved_in
ISO
(PMID:29669924)
UniProt
PMID:29669924
NCBI chr 2:57,641,634...57,699,685
Ensembl chr 2:57,639,046...57,699,525
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UNG
uracil DNA glycosylase
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:15494304) (PMID:17015724)
MGI Ensembl
PMID:15494304 PMID:17015724
GO_REF:0000107
NCBI chr11:104,302,507...104,325,160
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LOC103246803
mismatch repair endonuclease PMS2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:11828012)
MGI Ensembl
PMID:11828012
GO_REF:0000107
NCBI chr28:15,174,359...15,209,962
Ensembl chr28:15,172,100...15,209,852
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MLH1
mutL homolog 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:11828012)
Ensembl MGI
PMID:11828012
GO_REF:0000107
NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393
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MSH2
mutS homolog 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:14563316), (PMID:15955838) (PMID:11828012) (PMID:15494304) (PMID:14568978)
Ensembl MGI
PMID:11828012 PMID:14563316 PMID:14568978 PMID:15494304 PMID:15955838
GO_REF:0000107
NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819
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MSH3
mutS homolog 3
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:15238604)
MGI TreeGrafter
PMID:15238604
GO_REF:0000118
NCBI chr 4:74,811,181...75,032,067
Ensembl chr 4:74,811,198...75,032,005
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MSH6
mutS homolog 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15238604)
Ensembl MGI
PMID:15238604
GO_REF:0000107
NCBI chr14:59,375,602...59,400,252
Ensembl chr14:59,375,691...59,400,174
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UNG
uracil DNA glycosylase
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:15494304)
MGI Ensembl
PMID:15494304
GO_REF:0000107
NCBI chr11:104,302,507...104,325,160
G
MLH1
mutL homolog 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12743174)
Ensembl MGI
PMID:12743174
GO_REF:0000107
NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393
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MSH2
mutS homolog 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12743174)
Ensembl TreeGrafter MGI
PMID:12743174
GO_REF:0000107 GO_REF:0000118
NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819
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BCL11B
BCL11 transcription factor B
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:12717433)
MGI Ensembl
PMID:12717433
GO_REF:0000107
NCBI chr24:77,122,591...77,222,562
Ensembl chr24:77,122,689...77,221,454
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LEF1
lymphoid enhancer binding factor 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:9462507)
MGI Ensembl
PMID:9462507
GO_REF:0000107
NCBI chr 7:55,974,770...56,096,214
Ensembl chr 7:55,990,621...56,094,110
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LIG4
DNA ligase 4
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:10911993)
MGI Ensembl
PMID:10911993
GO_REF:0000107
NCBI chr 3:86,576,200...86,587,097
Ensembl chr 3:86,577,304...86,580,039
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PRKDC
protein kinase, DNA-activated, catalytic subunit
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9768755)
Ensembl MGI
PMID:9768755
GO_REF:0000107
NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541
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TCF7
transcription factor 7
acts_upstream_of_or_within
ISO
(PMID:9462507)
MGI
PMID:9462507
NCBI chr23:36,919,648...36,953,088
Ensembl chr23:36,919,745...36,951,192
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ATM
ATM serine/threonine kinase
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:23836881)
MGI Ensembl
PMID:23836881
GO_REF:0000107
NCBI chr 1:99,653,208...99,786,889
Ensembl chr 1:99,653,139...99,791,520
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DCAF1
DDB1 and CUL4 associated factor 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr22:12,736,784...12,843,762
Ensembl chr22:12,739,665...12,823,363
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DCLRE1C
DNA cross-link repair 1C
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23836881)
Ensembl MGI
PMID:23836881
GO_REF:0000107
NCBI chr 9:14,929,221...14,974,791
Ensembl chr 9:14,929,317...14,965,443
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HMGB1
high mobility group box 1
involved_in
ISO
(PMID:9166431)
UniProt
PMID:9166431
NCBI chr 3:9,353,333...9,357,765
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LIG1
DNA ligase 1
NOT|involved_in
ISO
(PMID:9809069)
UniProt
PMID:9809069
NCBI chr 6:41,354,701...41,405,417
Ensembl chr 6:41,351,389...41,403,421
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LIG3
DNA ligase 3
NOT|involved_in
ISO
(PMID:9809069)
UniProt
PMID:9809069
NCBI chr16:28,487,953...28,511,945
Ensembl chr16:28,490,434...28,511,130
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LIG4
DNA ligase 4
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:10716994) (PMID:15194694)
MGI Ensembl
PMID:10716994 PMID:15194694
GO_REF:0000107
NCBI chr 3:86,576,200...86,587,097
Ensembl chr 3:86,577,304...86,580,039
G
PRKDC
protein kinase, DNA-activated, catalytic subunit
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23836881)
Ensembl MGI
PMID:23836881
GO_REF:0000107
NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541
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RAG1
recombination activating 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:2360047)
Ensembl TreeGrafter MGI UniProt InterPro
PMID:2360047
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118
NCBI chr 1:28,667,996...28,701,002
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RAG2
recombination activating 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:2360047)
MGI Ensembl TreeGrafter
PMID:2360047
GO_REF:0000107 GO_REF:0000118
NCBI chr 1:28,645,175...28,653,823
Ensembl chr 1:28,649,930...28,651,513
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XRCC4
X-ray repair cross complementing 4
acts_upstream_of_or_within
ISO
(PMID:10716994)
MGI
PMID:10716994
NCBI chr 4:77,182,569...77,468,786
Ensembl chr 4:77,182,793...77,468,775
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XRCC6
X-ray repair cross complementing 6
acts_upstream_of_or_within
ISO
(PMID:10716994)
MGI
PMID:10716994
NCBI chr19:24,160,459...24,204,237
Ensembl chr19:24,160,483...24,206,320
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all