ONTOLOGY REPORT - ANNOTATIONS
Term: somatic diversification of immune receptors
Accession: GO:0002200
browse the term
Definition: The somatic process allowing for the production of immune receptors whose specificity is not encoded in the germline genomic sequences.
Comment: Note that this process covers somatic recombination, gene conversion, hypermutation, N-region addition, and alternate splicing processes of immune receptor diversification.
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POLB
DNA polymerase beta
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24388753)
Ensembl MGI
PMID:24388753
GO_REF:0000107
NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322
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YY1
YY1 transcription factor
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:68,539,511...68,572,796
Ensembl chr 8:68,539,353...68,568,058
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CYREN
cell cycle regulator of NHEJ
involved_in
ISO
(PMID:30017584), (PMID:31795137)
UniProt
PMID:30017584 PMID:31795137
NCBI chr16:12,994,508...13,003,632
Ensembl chr16:12,994,479...12,998,435
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FOXP1
forkhead box P1
acts_upstream_of_or_within
ISO
(PMID:16819554)
MGI
PMID:16819554
NCBI chr20:20,438,631...21,020,516
Ensembl chr20:20,788,433...21,016,397
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LIG4
DNA ligase 4
involved_in acts_upstream_of_or_within
IEA IBA ISO
(PMID:9823897)
Ensembl GO_Central MGI
PMID:9823897
GO_REF:0000033 GO_REF:0000107
NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357
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NHEJ1
non-homologous end joining factor 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr37:25,637,214...25,719,241
Ensembl chr37:25,637,601...25,715,372
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PRKDC
protein kinase, DNA-activated, catalytic subunit
involved_in acts_upstream_of_or_within
IBA ISO
(PMID:9768755)
GO_Central MGI
PMID:9768755
GO_REF:0000033
NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895
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TCF3
transcription factor 3
acts_upstream_of_or_within involved_in
ISO IBA IEA
(PMID:16428437)
MGI GO_Central Ensembl
PMID:16428437
GO_REF:0000033 GO_REF:0000107
NCBI chr20:57,255,091...57,284,223
Ensembl chr20:57,254,384...57,283,981
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XRCC4
X-ray repair cross complementing 4
acts_upstream_of_or_within involved_in
ISO IBA
(PMID:9875844)
MGI GO_Central
PMID:9875844
GO_REF:0000033
NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465
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AICDA
activation induced cytidine deaminase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17713479)
Ensembl MGI
PMID:17713479
GO_REF:0000107
NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789
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ATAD5
ATPase family AAA domain containing 5
involved_in acts_upstream_of
IEA ISO
(PMID:25404367)
Ensembl MGI
PMID:25404367
GO_REF:0000107
NCBI chr 9:40,869,778...40,917,976
Ensembl chr 9:40,870,924...40,915,629
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BATF
basic leucine zipper ATF-like transcription factor
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:48,537,036...48,561,154
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CD40LG
CD40 ligand
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr X:107,001,421...107,023,007
Ensembl chr X:107,010,890...107,023,006
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ERCC1
ERCC excision repair 1, endonuclease non-catalytic subunit
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15280420)
Ensembl MGI
PMID:15280420
GO_REF:0000107
NCBI chr 1:110,130,353...110,146,660
Ensembl chr 1:110,130,481...110,146,602
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EXO1
exonuclease 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:14716311)
Ensembl MGI
PMID:14716311
GO_REF:0000107
NCBI chr 7:33,237,124...33,268,835
Ensembl chr 7:33,237,593...33,268,254
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EXOSC3
exosome component 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:54,072,993...54,079,024
Ensembl chr11:54,073,313...54,078,598
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EXOSC6
exosome component 6
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 5:76,286,286...76,287,667
Ensembl chr 5:76,286,789...76,287,976
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LIG4
DNA ligase 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17713479)
Ensembl MGI
PMID:17713479
GO_REF:0000107
NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357
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MLH1
mutL homolog 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12743174)
Ensembl MGI
PMID:12743174
GO_REF:0000107
NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116
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MSH2
mutS homolog 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10430621) (PMID:12743174)
Ensembl MGI
PMID:10430621 PMID:12743174
GO_REF:0000107
NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210
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MSH6
mutS homolog 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16618598) (PMID:17015724)
Ensembl MGI
PMID:16618598 PMID:17015724
GO_REF:0000107
NCBI chr10:49,825,330...49,838,036
Ensembl chr10:49,803,898...49,838,028
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NBN
nibrin
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563
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NFKBIZ
NFKB inhibitor zeta
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr33:8,147,160...8,154,401
Ensembl chr33:8,073,840...8,154,561
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PCYT1A
phosphate cytidylyltransferase 1A, choline
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr33:29,363,282...29,414,635
Ensembl chr33:29,358,452...29,430,424
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RNF168
ring finger protein 168
involved_in
ISO
(PMID:20080757)
UniProt
PMID:20080757
NCBI chr33:29,542,209...29,575,127
Ensembl chr33:29,539,182...29,628,248
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RNF8
ring finger protein 8
involved_in
ISO
(PMID:20080757)
UniProt
PMID:20080757
NCBI chr12:6,380,365...6,415,407
Ensembl chr12:6,292,459...6,415,382
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SANBR
SANT and BTB domain regulator of CSR
involved_in
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr10:61,143,971...61,195,058
Ensembl chr10:61,123,655...61,193,241
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SWAP70
switching B cell complex subunit SWAP70
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9642267)
Ensembl MGI
PMID:9642267
GO_REF:0000107
NCBI chr21:32,910,547...32,985,617
Ensembl chr21:32,910,563...32,984,580
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UNG
uracil DNA glycosylase
acts_upstream_of_or_within
ISO
(PMID:17015724)
MGI
PMID:17015724
NCBI chr26:17,900,354...17,911,126
Ensembl chr26:17,901,357...17,911,288
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XRCC4
X-ray repair cross complementing 4
acts_upstream_of_or_within
ISO
(PMID:17713479)
MGI
PMID:17713479
NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465
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CCR6
C-C motif chemokine receptor 6
involved_in
ISO
(PMID:27174992)
UniProt
PMID:27174992
NCBI chr 1:54,932,798...54,960,646
Ensembl chr 1:54,932,690...54,959,740
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BCL6
BCL6 transcription repressor
involved_in acts_upstream_of
IEA ISO
(PMID:10490661)
Ensembl MGI
PMID:10490661
GO_REF:0000107
NCBI chr34:20,112,302...20,135,705
Ensembl chr34:20,113,322...20,124,704
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FOXP3
forkhead box P3
involved_in acts_upstream_of
IEA ISO
(PMID:16275384)
Ensembl MGI
PMID:16275384
GO_REF:0000107
NCBI chr X:42,331,229...42,362,841
Ensembl chr X:42,344,108...42,350,758
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IL4
interleukin 4
acts_upstream_of
ISO
(PMID:14988498)
MGI
PMID:14988498
NCBI chr11:20,972,693...20,981,539
Ensembl chr11:20,972,690...20,981,534
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RTP2
receptor transporter protein 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr34:20,087,395...20,091,248
Ensembl chr34:20,087,226...20,115,428
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STAT6
signal transducer and activator of transcription 6
involved_in acts_upstream_of
IEA ISO
(PMID:10490661)
Ensembl MGI
PMID:10490661
GO_REF:0000107
NCBI chr10:1,232,515...1,247,011
Ensembl chr10:1,233,691...1,247,075
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HSPD1
heat shock protein family D (Hsp60) member 1
involved_in
ISO
(PMID:16148103)
BHF-UCL
PMID:16148103
NCBI chr37:7,010,421...7,025,912
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IL4
interleukin 4
acts_upstream_of
ISO
(PMID:14988498)
MGI
PMID:14988498
NCBI chr11:20,972,693...20,981,539
Ensembl chr11:20,972,690...20,981,534
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PARP3
poly(ADP-ribose) polymerase family member 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr20:37,767,336...37,774,269
Ensembl chr20:37,767,505...37,773,770
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BCL6
BCL6 transcription repressor
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10490661)
Ensembl MGI
PMID:10490661
GO_REF:0000107
NCBI chr34:20,112,302...20,135,705
Ensembl chr34:20,113,322...20,124,704
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FOXP3
forkhead box P3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16275384)
Ensembl MGI
PMID:16275384
GO_REF:0000107
NCBI chr X:42,331,229...42,362,841
Ensembl chr X:42,344,108...42,350,758
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NDFIP1
Nedd4 family interacting protein 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17137798)
Ensembl MGI
PMID:17137798
GO_REF:0000107
NCBI chr 2:36,978,148...37,065,247
Ensembl chr 2:36,961,024...37,064,303
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RTP2
receptor transporter protein 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr34:20,087,395...20,091,248
Ensembl chr34:20,087,226...20,115,428
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TNFSF4
TNF superfamily member 4
involved_in
ISO
(PMID:12496423)
BHF-UCL
PMID:12496423
NCBI chr 7:25,883,297...25,909,608
Ensembl chr 7:25,883,251...25,906,892
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EXOSC3
exosome component 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21255825)
Ensembl MGI
PMID:21255825
GO_REF:0000107
NCBI chr11:54,072,993...54,079,024
Ensembl chr11:54,073,313...54,078,598
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EXOSC6
exosome component 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21255825)
Ensembl MGI
PMID:21255825
GO_REF:0000107
NCBI chr 5:76,286,286...76,287,667
Ensembl chr 5:76,286,789...76,287,976
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HMCES
5-hydroxymethylcytosine binding, ES cell specific
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr20:2,808,687...2,831,123
Ensembl chr20:2,808,689...2,830,462
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KMT5B
lysine methyltransferase 5B
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr18:49,655,783...49,691,899
Ensembl chr18:49,637,610...49,827,034
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KMT5C
lysine methyltransferase 5C
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:102,334,687...102,342,090
Ensembl chr 1:102,333,543...102,342,118
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MAD2L2
mitotic arrest deficient 2 like 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 2:84,539,724...84,549,402
Ensembl chr 2:84,545,226...84,549,356
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PAXIP1
PAX interacting protein 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr16:18,066,289...18,116,007
Ensembl chr16:18,066,246...18,112,506
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RIF1
replication timing regulatory factor 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr19:52,661,278...52,711,969
Ensembl chr19:52,661,155...52,709,279
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SHLD1
shieldin complex subunit 1
involved_in
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr24:15,957,863...16,037,336
Ensembl chr24:15,957,852...16,038,008
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SHLD2
shieldin complex subunit 2
involved_in
ISO
(PMID:29656893)
UniProt
PMID:29656893
NCBI chr 4:34,665,111...34,740,645
Ensembl chr 4:34,688,245...34,763,705
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SHLD3
shieldin complex subunit 3
involved_in
ISO
(PMID:29656893)
UniProt
PMID:29656893
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TFRC
transferrin receptor
involved_in
IEA ISS
Ensembl UniProt
GO_REF:0000024 GO_REF:0000107
NCBI chr33:29,206,024...29,237,221
Ensembl chr33:29,208,609...29,238,242
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TP53BP1
tumor protein p53 binding protein 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr30:10,263,650...10,362,646
Ensembl chr30:10,263,650...10,336,134
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B9D2
B9 domain containing 2
acts_upstream_of_or_within
ISO
(PMID:14988498)
MGI
PMID:14988498
NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
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MLH1
mutL homolog 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116
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MSH2
mutS homolog 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210
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NSD2
nuclear receptor binding SET domain protein 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23241889)
Ensembl MGI
PMID:23241889
GO_REF:0000107
NCBI chr 3:62,164,888...62,228,006
Ensembl chr 3:62,167,939...62,228,035
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PMS2
PMS1 homolog 2, mismatch repair system component
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:11,411,062...11,438,767
Ensembl chr 6:11,349,453...11,438,940
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TGFB1
transforming growth factor beta 1
involved_in
ISS IEA
AgBase Ensembl
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885
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TNFSF13
TNF superfamily member 13
acts_upstream_of_or_within involved_in
ISO IBA IEA
(PMID:14988498)
MGI GO_Central Ensembl
PMID:14988498
GO_REF:0000033 GO_REF:0000107
NCBI chr 5:32,482,723...32,484,790
Ensembl chr 5:32,482,723...32,484,789
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CLCF1
cardiotrophin like cytokine factor 1
involved_in
ISO
(PMID:12023368)
BHF-UCL
PMID:12023368
NCBI chr18:50,084,120...50,093,825
Ensembl chr18:50,083,915...50,102,651
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IL4
interleukin 4
involved_in acts_upstream_of_or_within
ISS ISO
(PMID:14988498)
UniProt MGI
PMID:14988498
GO_REF:0000024
NCBI chr11:20,972,693...20,981,539
Ensembl chr11:20,972,690...20,981,534
G
STAT6
signal transducer and activator of transcription 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10490661)
Ensembl MGI
PMID:10490661
GO_REF:0000107
NCBI chr10:1,232,515...1,247,011
Ensembl chr10:1,233,691...1,247,075
G
ATAD5
ATPase family AAA domain containing 5
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:25404367)
Ensembl MGI
PMID:25404367
GO_REF:0000107
NCBI chr 9:40,869,778...40,917,976
Ensembl chr 9:40,870,924...40,915,629
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CD28
CD28 molecule
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:7688139)
Ensembl MGI
PMID:7688139
GO_REF:0000107
NCBI chr37:12,503,849...12,536,362
Ensembl chr37:12,503,811...12,532,854
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CD40
CD40 molecule
acts_upstream_of_or_within
ISO
(PMID:12882831)
MGI
PMID:12882831
NCBI chr24:33,352,992...33,383,488
Ensembl chr24:33,372,930...33,383,301
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IFNG
interferon gamma
acts_upstream_of_or_within
ISO
(PMID:12882831)
MGI
PMID:12882831
NCBI chr10:10,406,866...10,411,698
Ensembl chr10:10,406,867...10,411,698
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IL2
interleukin 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:1830926)
MGI Ensembl
PMID:1830926
GO_REF:0000107
NCBI chr19:17,750,780...17,756,394
Ensembl chr19:17,750,780...17,756,394
G
IL4
interleukin 4
involved_in acts_upstream_of_or_within
ISS ISO
(PMID:12882831), (PMID:14988498)
UniProt MGI
PMID:12882831 PMID:14988498
GO_REF:0000024
NCBI chr11:20,972,693...20,981,539
Ensembl chr11:20,972,690...20,981,534
G
MLH1
mutL homolog 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116
G
MSH2
mutS homolog 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210
G
PAGR1
PAXIP1 associated glutamate rich protein 1
involved_in
ISO
(PMID:26744420)
UniProt
PMID:26744420
NCBI chr 6:17,876,740...17,879,546
G
PAXIP1
PAX interacting protein 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr16:18,066,289...18,116,007
Ensembl chr16:18,066,246...18,112,506
G
PMS2
PMS1 homolog 2, mismatch repair system component
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:11,411,062...11,438,767
Ensembl chr 6:11,349,453...11,438,940
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PTPRC
protein tyrosine phosphatase receptor type C
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9015183)
Ensembl MGI
PMID:9015183
GO_REF:0000107
NCBI chr 7:4,155,876...4,282,151
Ensembl chr 7:4,137,728...4,282,124
G
TBX21
T-box transcription factor 21
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12882831)
Ensembl MGI
PMID:12882831
GO_REF:0000107
NCBI chr 9:24,077,752...24,086,560
Ensembl chr 9:24,077,761...24,086,261
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APLF
aprataxin and PNKP like factor
acts_upstream_of_or_within
ISO
(PMID:21211721)
MGI
PMID:21211721
NCBI chr10:67,454,500...67,522,659
Ensembl chr10:67,454,356...67,521,761
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MIR181B-2
microRNA mir-181b-2
acts_upstream_of_or_within
ISO
(PMID:18762567)
MGI
PMID:18762567
NCBI chr 9:58,301,314...58,301,373
Ensembl chr 9:58,301,300...58,301,388
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MIR181D
microRNA mir-181d
acts_upstream_of_or_within
ISO
(PMID:18762567)
MGI
PMID:18762567
NCBI chr20:48,593,158...48,593,221
G
SUPT6H
SPT6 homolog, histone chaperone and transcription elongation factor
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:42,859,154...42,896,044
Ensembl chr 9:42,859,361...42,904,487
G
FOXP3
forkhead box P3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16275384)
Ensembl MGI
PMID:16275384
GO_REF:0000107
NCBI chr X:42,331,229...42,362,841
Ensembl chr X:42,344,108...42,350,758
G
IL27RA
interleukin 27 receptor subunit alpha
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:11057672)
Ensembl MGI
PMID:11057672
GO_REF:0000107
NCBI chr20:48,456,766...48,475,414
Ensembl chr20:48,457,134...48,472,450
G
NDFIP1
Nedd4 family interacting protein 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17137798)
Ensembl MGI
PMID:17137798
GO_REF:0000107
NCBI chr 2:36,978,148...37,065,247
Ensembl chr 2:36,961,024...37,064,303
G
SLC15A4
solute carrier family 15 member 4
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr26:2,803,798...2,832,057
Ensembl chr26:2,802,724...2,831,530
G
ADAR
adenosine deaminase RNA specific
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23209284)
Ensembl MGI
PMID:23209284
GO_REF:0000107
NCBI chr 7:42,762,021...42,785,192
Ensembl chr 7:42,748,136...42,782,999
G
AICDA
activation induced cytidine deaminase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789
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CTNNBL1
catenin beta like 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr24:26,253,884...26,415,166
Ensembl chr24:26,253,962...26,415,163
G
POLB
DNA polymerase beta
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24388753)
Ensembl MGI
PMID:24388753
GO_REF:0000107
NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322
G
AICDA
activation induced cytidine deaminase
involved_in
ISS IEA
UniProt Ensembl
GO_REF:0000024 GO_REF:0000107
NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789
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EXO1
exonuclease 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:14716311)
Ensembl MGI
PMID:14716311
GO_REF:0000107
NCBI chr 7:33,237,124...33,268,835
Ensembl chr 7:33,237,593...33,268,254
G
HMCES
5-hydroxymethylcytosine binding, ES cell specific
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr20:2,808,687...2,831,123
Ensembl chr20:2,808,689...2,830,462
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MCM3AP
minichromosome maintenance complex component 3 associated protein
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr31:39,507,714...39,559,855
Ensembl chr31:39,507,729...39,561,674
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MLH1
mutL homolog 1
involved_in acts_upstream_of_or_within
IEA IBA ISO
(PMID:10092760), (PMID:10429667)
Ensembl GO_Central MGI
PMID:10092760 PMID:10429667
GO_REF:0000033 GO_REF:0000107
NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116
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MSH2
mutS homolog 2
involved_in acts_upstream_of_or_within NOT|acts_upstream_of_or_within
IEA ISO
(PMID:14568978) (PMID:9607915) (PMID:15494304) (PMID:9607916) (PMID:9697842), (PMID:9697843)
Ensembl MGI
PMID:9607915 PMID:9607916 PMID:9697842 PMID:9697843 PMID:14568978 PMID:15494304 More...
GO_REF:0000107
NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210
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MSH3
mutS homolog 3
NOT|acts_upstream_of_or_within
ISO
(PMID:10662804)
MGI
PMID:10662804
NCBI chr 3:26,335,788...26,520,633
Ensembl chr 3:26,336,403...26,518,521
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MSH6
mutS homolog 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16618598) (PMID:10662804), (PMID:15238604), (PMID:17015724)
Ensembl MGI
PMID:10662804 PMID:15238604 PMID:16618598 PMID:17015724
GO_REF:0000107
NCBI chr10:49,825,330...49,838,036
Ensembl chr10:49,803,898...49,838,028
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NUGGC
nuclear GTPase, germinal center associated
acts_upstream_of_or_within
ISO
(PMID:22833677)
MGI
PMID:22833677
NCBI chr25:29,507,198...29,561,565
Ensembl chr25:29,520,921...29,561,349
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PMS2
PMS1 homolog 2, mismatch repair system component
involved_in acts_upstream_of_or_within
IEA IBA ISO
(PMID:10429667)
Ensembl GO_Central MGI
PMID:10429667
GO_REF:0000033 GO_REF:0000107
NCBI chr 6:11,411,062...11,438,767
Ensembl chr 6:11,349,453...11,438,940
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POLB
DNA polymerase beta
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24388753)
Ensembl MGI
PMID:24388753
GO_REF:0000107
NCBI chr16:23,306,359...23,335,352
Ensembl chr16:23,306,367...23,335,322
G
POLM
DNA polymerase mu
acts_upstream_of_or_within
ISO
(PMID:15789338)
MGI
PMID:15789338
G
POLQ
DNA polymerase theta
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr33:24,713,174...24,837,113
Ensembl chr33:24,714,086...24,837,402
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SAMHD1
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902
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UNG
uracil DNA glycosylase
acts_upstream_of_or_within
ISO
(PMID:17015724) (PMID:15494304)
MGI
PMID:15494304 PMID:17015724
NCBI chr26:17,900,354...17,911,126
Ensembl chr26:17,901,357...17,911,288
G
MLH1
mutL homolog 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:11828012)
Ensembl MGI
PMID:11828012
GO_REF:0000107
NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116
G
MSH2
mutS homolog 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15494304) (PMID:11828012) (PMID:14568978) (PMID:14563316), (PMID:15955838)
Ensembl MGI
PMID:11828012 PMID:14563316 PMID:14568978 PMID:15494304 PMID:15955838
GO_REF:0000107
NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210
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MSH3
mutS homolog 3
acts_upstream_of_or_within involved_in
ISO IBA
(PMID:15238604)
MGI GO_Central
PMID:15238604
GO_REF:0000033
NCBI chr 3:26,335,788...26,520,633
Ensembl chr 3:26,336,403...26,518,521
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MSH6
mutS homolog 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15238604)
Ensembl MGI
PMID:15238604
GO_REF:0000107
NCBI chr10:49,825,330...49,838,036
Ensembl chr10:49,803,898...49,838,028
G
PMS2
PMS1 homolog 2, mismatch repair system component
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:11828012)
Ensembl MGI
PMID:11828012
GO_REF:0000107
NCBI chr 6:11,411,062...11,438,767
Ensembl chr 6:11,349,453...11,438,940
G
UNG
uracil DNA glycosylase
acts_upstream_of_or_within
ISO
(PMID:15494304)
MGI
PMID:15494304
NCBI chr26:17,900,354...17,911,126
Ensembl chr26:17,901,357...17,911,288
G
MLH1
mutL homolog 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12743174)
Ensembl MGI
PMID:12743174
GO_REF:0000107
NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116
G
MSH2
mutS homolog 2
involved_in acts_upstream_of_or_within
IEA IBA ISO
(PMID:12743174)
Ensembl GO_Central MGI
PMID:12743174
GO_REF:0000033 GO_REF:0000107
NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210
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BCL11B
BCL11 transcription factor B
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12717433)
Ensembl MGI
PMID:12717433
GO_REF:0000107
NCBI chr 8:67,622,592...67,713,922
Ensembl chr 8:67,622,708...67,714,404
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LEF1
lymphoid enhancer binding factor 1
acts_upstream_of_or_within
ISO
(PMID:9462507)
MGI
PMID:9462507
NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019
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LIG4
DNA ligase 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10911993)
Ensembl MGI
PMID:10911993
GO_REF:0000107
NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357
G
PRKDC
protein kinase, DNA-activated, catalytic subunit
acts_upstream_of_or_within
ISO
(PMID:9768755)
MGI
PMID:9768755
NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895
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TCF7
transcription factor 7
acts_upstream_of_or_within
ISO
(PMID:9462507)
MGI
PMID:9462507
NCBI chr11:22,313,113...22,346,221
Ensembl chr11:22,313,105...22,344,004
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ATM
ATM serine/threonine kinase
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23836881)
Ensembl MGI
PMID:23836881
GO_REF:0000107
NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207
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DCAF1
DDB1 and CUL4 associated factor 1
involved_in
ISO
(PMID:22157821)
UniProt
PMID:22157821
NCBI chr20:38,109,974...38,187,621
Ensembl chr20:38,125,078...38,187,107
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DCLRE1C
DNA cross-link repair 1C
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23836881)
Ensembl MGI
PMID:23836881
GO_REF:0000107
NCBI chr 2:21,688,822...21,725,021
Ensembl chr 2:21,688,766...21,724,248
G
HMGB1
high mobility group box 1
involved_in
ISO
(PMID:9166431)
UniProt
PMID:9166431
NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165
G
LIG1
DNA ligase 1
NOT|involved_in
ISO
(PMID:9809069)
UniProt
PMID:9809069
NCBI chr 1:108,105,523...108,143,954
Ensembl chr 1:108,105,987...108,143,953
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LIG3
DNA ligase 3
NOT|involved_in
ISO
(PMID:9809069)
UniProt
PMID:9809069
NCBI chr 9:38,346,275...38,366,634
Ensembl chr 9:38,346,199...38,366,193
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LIG4
DNA ligase 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10716994) (PMID:15194694)
Ensembl MGI
PMID:10716994 PMID:15194694
GO_REF:0000107
NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357
G
PRKDC
protein kinase, DNA-activated, catalytic subunit
acts_upstream_of_or_within
ISO
(PMID:23836881)
MGI
PMID:23836881
NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895
G
RAG1
recombination activating 1
involved_in acts_upstream_of_or_within
IEA IBA ISO
(PMID:2360047)
UniProt GO_Central MGI Ensembl InterPro
PMID:2360047
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107
NCBI chr18:31,628,231...31,639,980
Ensembl chr18:31,630,737...31,641,660
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RAG2
recombination activating 2
involved_in acts_upstream_of_or_within
IEA IBA ISO
(PMID:2360047)
Ensembl GO_Central MGI
PMID:2360047
GO_REF:0000033 GO_REF:0000107
NCBI chr18:31,614,143...31,621,489
Ensembl chr18:31,618,481...31,620,064
G
XRCC4
X-ray repair cross complementing 4
acts_upstream_of_or_within
ISO
(PMID:10716994)
MGI
PMID:10716994
NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465
G
XRCC6
X-ray repair cross complementing 6
acts_upstream_of_or_within
ISO
(PMID:10716994)
MGI
PMID:10716994
NCBI chr10:23,637,905...23,661,618
Ensembl chr10:23,638,237...23,661,480
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all