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ONTOLOGY REPORT - ANNOTATIONS

Term:lymph vessel development
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Accession:GO:0001945 term browser browse the term
Definition:The process whose specific outcome is the progression of a lymph vessel over time, from its formation to the mature structure.


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lymph vessel development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccbe1 collagen and calcium binding EGF domains 1 acts_upstream_of_or_within ISO
IEA		 MGI:5495674 (PMID:24733830)
GO_REF:0000107		 RGD
Ensembl		 PMID:24733830 GO_REF:0000107 NCBI chr18:59,579,851...59,823,977
Ensembl chr18:59,580,768...59,824,400 		JBrowse link
G Efnb2 ephrin B2 acts_upstream_of_or_within ISO
IEA		 MGI:3573787 (PMID:15687262)
GO_REF:0000107		 RGD
Ensembl		 PMID:15687262 GO_REF:0000107 NCBI chr16:80,783,389...80,827,420
Ensembl chr16:80,783,417...80,824,391 		JBrowse link
G Flt4 Fms related receptor tyrosine kinase 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:3039635 (PMID:20439428)
GO_REF:0000107
(PMID:19903896)		 RGD
Ensembl		 PMID:19903896 PMID:20439428 GO_REF:0000107 NCBI chr10:33,913,725...33,954,770
Ensembl chr10:33,913,608...33,954,770 		JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO
IEA		 MGI:1347481 (PMID:16678147)
GO_REF:0000107		 RGD
Ensembl		 PMID:16678147 GO_REF:0000107 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1347466 (PMID:16678147) RGD PMID:16678147 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737 		JBrowse link
G Heg1 heart development protein with EGF-like domains 1 acts_upstream_of_or_within ISO MGI:3838392 (PMID:19151727) RGD PMID:19151727 NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051 		JBrowse link
G Kdr kinase insert domain receptor acts_upstream_of_or_within ISO
IEA		 MGI:3039635 (PMID:20439428)
GO_REF:0000107		 RGD
Ensembl		 PMID:20439428 GO_REF:0000107 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018 		JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IEA
ISO		 GO_REF:0000107
MGI:3774275 (PMID:32901096)		 Ensembl
RGD		 PMID:32901096 GO_REF:0000107 NCBI chr 5:57,883,171...57,901,590
Ensembl chr 5:57,883,171...57,901,580 		JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 involved_in ISO
IEA		 (PMID:19210544)
GO_REF:0000107		 RGD
Ensembl		 PMID:19210544 GO_REF:0000107 NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031 		JBrowse link
G Prox1 prospero homeobox 1 acts_upstream_of_or_within ISO
IEA		 MGI:2450311|MGI:3609548 (PMID:16170315)
GO_REF:0000107		 RGD
Ensembl		 PMID:16170315 GO_REF:0000107 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Sox18 SRY-box transcription factor 18 acts_upstream_of_or_within ISO
IEA		 MGI:1856135|MGI:2178809 (PMID:19515696), (PMID:291594)
GO_REF:0000107		 RGD
Ensembl		 PMID:291594 PMID:19515696 GO_REF:0000107 NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290 		JBrowse link
G Svep1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 acts_upstream_of_or_within ISO
IEA		 MGI:5286317 (PMID:28179432)
GO_REF:0000107		 RGD
Ensembl		 PMID:28179432 GO_REF:0000107 NCBI chr 5:72,811,200...72,988,185
Ensembl chr 5:72,811,410...72,988,525 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:12522250)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:12522250 GO_REF:0000024 GO_REF:0000107 NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2450311|MGI:3046793 (PMID:20439995)		 UniProt
RGD		 PMID:20439995 GO_REF:0000024 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tmem204 transmembrane protein 204 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:95561|MGI:96683 (PMID:20439428)		 GO_Central
Ensembl
RGD		 PMID:20439428 GO_REF:0000033 GO_REF:0000107 NCBI chr10:14,076,518...14,104,849
Ensembl chr10:14,076,519...14,101,920 		JBrowse link
branching involved in lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfatc1 nuclear factor of activated T-cells 1 acts_upstream_of_or_within ISO MGI:2181762 (PMID:19233265) RGD PMID:19233265 NCBI chr18:74,046,422...74,156,041
Ensembl chr18:74,046,904...74,156,028 		JBrowse link
G Tie1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1 involved_in ISO
IEA		 (PMID:20223757)
GO_REF:0000107		 RGD
Ensembl		 PMID:20223757 GO_REF:0000107 NCBI chr 5:132,000,013...132,019,658
Ensembl chr 5:132,000,015...132,019,592 		JBrowse link
lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1 polycystin 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO
IEA		 MGI:3612341 (PMID:24767999)
GO_REF:0000107		 RGD
Ensembl		 PMID:24767999 GO_REF:0000107 NCBI chr10:13,573,779...13,621,138
Ensembl chr10:13,573,021...13,621,128 		JBrowse link
G Svep1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:5286317|MGI:6188639 (PMID:28179430), (PMID:28179432)		 GO_Central
Ensembl
RGD		 PMID:28179430 PMID:28179432 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:72,811,200...72,988,185
Ensembl chr 5:72,811,410...72,988,525 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:18093989) RGD PMID:18093989 NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
lymphangiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2b activin A receptor type 2B involved_in ISO
IEA		 (PMID:19903896)
GO_REF:0000107		 RGD
Ensembl		 PMID:19903896 GO_REF:0000107 NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458 		JBrowse link
G Acvrl1 activin A receptor like type 1 involved_in ISO (PMID:19903896) RGD PMID:19903896 NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in ISO
IEA		 (PMID:19903896)
GO_REF:0000107		 RGD
Ensembl		 PMID:19903896 GO_REF:0000107 NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809 		JBrowse link
G Ccbe1 collagen and calcium binding EGF domains 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:19935664)
GO_REF:0000107
MGI:5007046 (PMID:21778431)		 RGD
Ensembl		 PMID:19935664 PMID:21778431 GO_REF:0000107 NCBI chr18:59,579,851...59,823,977
Ensembl chr18:59,580,768...59,824,400 		JBrowse link
G Clec14a C-type lectin domain containing 14A acts_upstream_of_or_within ISO
IEA		 MGI:6404416 (PMID:27991863)
GO_REF:0000107		 RGD
Ensembl		 PMID:27991863 GO_REF:0000107 NCBI chr 6:75,881,470...75,884,612
Ensembl chr 6:75,881,473...75,884,612 		JBrowse link
G Flt4 Fms related receptor tyrosine kinase 4 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:20697430)
GO_REF:0000024
(PMID:19779139)		 Ensembl
RGD
UniProt		 PMID:19779139 PMID:20697430 GO_REF:0000024 GO_REF:0000107 NCBI chr10:33,913,725...33,954,770
Ensembl chr10:33,913,608...33,954,770 		JBrowse link
G Foxc2 forkhead box C2 involved_in ISO (PMID:12114478) RGD PMID:12114478 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737 		JBrowse link
G Nfatc1 nuclear factor of activated T-cells 1 acts_upstream_of_or_within ISO MGI:103178|MGI:107163 (PMID:19233265) RGD PMID:19233265 NCBI chr18:74,046,422...74,156,041
Ensembl chr18:74,046,904...74,156,028 		JBrowse link
G Pdpn podoplanin involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2657021 (PMID:12853470)		 UniProt
RGD		 PMID:12853470 GO_REF:0000024 NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656 		JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta acts_upstream_of_or_within ISO
IEA		 MGI:102469|MGI:103178 (PMID:19233846)
GO_REF:0000107		 RGD
Ensembl		 PMID:19233846 GO_REF:0000107 NCBI chr15:3,759,950...3,804,976
Ensembl chr15:3,760,030...3,804,981 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO
IEA		 (PMID:12412020)
GO_REF:0000107		 RGD
Ensembl		 PMID:12412020 GO_REF:0000107 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Ptpn14 protein tyrosine phosphatase, non-receptor type 14 involved_in ISO
IEA
IBA		 (PMID:20826270)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:20826270 GO_REF:0000033 GO_REF:0000107 NCBI chr13:101,268,258...101,420,508
Ensembl chr13:101,268,416...101,414,088 		JBrowse link
G Ptpn20 protein tyrosine phosphatase, non-receptor type 20 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:8,885,585...8,949,805
Ensembl chr16:8,893,324...8,949,783 		JBrowse link
G Sox18 SRY-box transcription factor 18 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:12740761)
GO_REF:0000107
MGI:2178809 (PMID:18931657)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:12740761 PMID:18931657 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI:102469|MGI:107163 (PMID:19233265)
(PMID:20133819)		 RGD PMID:19233265 PMID:20133819 NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
lymphatic endothelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2b activin A receptor type 2B involved_in ISO
IEA		 (PMID:19903896)
GO_REF:0000107		 RGD
Ensembl		 PMID:19903896 GO_REF:0000107 NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458 		JBrowse link
G Acvrl1 activin A receptor like type 1 involved_in ISO (PMID:19903896) RGD PMID:19903896 NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in ISO
IEA		 (PMID:19903896)
GO_REF:0000107		 RGD
Ensembl		 PMID:19903896 GO_REF:0000107 NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809 		JBrowse link
G Prox1 prospero homeobox 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:12198161)
GO_REF:0000107
MGI:2182767|MGI:3609548 (PMID:19056883)		 RGD
Ensembl		 PMID:12198161 PMID:19056883 GO_REF:0000107 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Sox18 SRY-box transcription factor 18 acts_upstream_of_or_within ISO
IEA		 MGI:2178809 (PMID:18931657)
GO_REF:0000107		 RGD
Ensembl		 PMID:18931657 GO_REF:0000107 NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290 		JBrowse link
G Tie1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1 acts_upstream_of_or_within ISO
IEA		 (PMID:20223757)
GO_REF:0000107		 RGD
Ensembl		 PMID:20223757 GO_REF:0000107 NCBI chr 5:132,000,013...132,019,658
Ensembl chr 5:132,000,015...132,019,592 		JBrowse link
lymphatic endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 involved_in ISO
IEA		 (PMID:18815287)
GO_REF:0000107		 RGD
Ensembl		 PMID:18815287 GO_REF:0000107 NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031 		JBrowse link
G Pdpn podoplanin involved_in ISS
ISO		 GO_REF:0000024
(PMID:20110424)		 UniProt
RGD		 PMID:20110424 GO_REF:0000024 NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO
IEA		 (PMID:18815287)
GO_REF:0000107		 RGD
Ensembl		 PMID:18815287 GO_REF:0000107 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
lymphatic endothelial cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccbe1 collagen and calcium binding EGF domains 1 acts_upstream_of ISO
IEA		 MGI:5007046 (PMID:21778431)
GO_REF:0000107		 RGD
Ensembl		 PMID:21778431 GO_REF:0000107 NCBI chr18:59,579,851...59,823,977
Ensembl chr18:59,580,768...59,824,400 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of ISO
IEA		 (PMID:16291864)
GO_REF:0000107		 RGD
Ensembl		 PMID:16291864 GO_REF:0000107 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
G Lgals8 galectin 8 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19268462)		 UniProt
RGD		 PMID:19268462 GO_REF:0000024 NCBI chr17:58,024,652...58,052,764
Ensembl chr17:58,028,105...58,052,764 		JBrowse link
negative regulation of lymphangiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha2 Eph receptor A2 acts_upstream_of_or_within ISO
IEA		 MGI:3040415 (PMID:19443703)
GO_REF:0000107		 RGD
Ensembl		 PMID:19443703 GO_REF:0000107 NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117 		JBrowse link
G Foxc1 forkhead box C1 involved_in ISO
IEA		 (PMID:22171010)
GO_REF:0000107		 RGD
Ensembl		 PMID:22171010 GO_REF:0000107 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803 		JBrowse link
G Vash1 vasohibin 1 acts_upstream_of_or_within ISO
IEA		 UniProtKB:P97953|UniProtKB:Q00731 (PMID:20133819)
GO_REF:0000107		 RGD
Ensembl		 PMID:20133819 GO_REF:0000107 NCBI chr 6:106,330,374...106,345,740
Ensembl chr 6:106,329,123...106,345,726 		JBrowse link
positive regulation of lymphangiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccbe1 collagen and calcium binding EGF domains 1 involved_in ISO
IEA		 (PMID:24552833)
GO_REF:0000107		 RGD
Ensembl		 PMID:24552833 GO_REF:0000107 NCBI chr18:59,579,851...59,823,977
Ensembl chr18:59,580,768...59,824,400 		JBrowse link
G Mir9-3 microRNA 9-3 acts_upstream_of ISO (PMID:26354749) RGD PMID:26354749 NCBI chr 1:133,440,049...133,440,138 JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO (PMID:20133819) RGD PMID:20133819 NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
G Vegfc vascular endothelial growth factor C acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20133819)
GO_REF:0000107
(PMID:24552833)		 RGD
Ensembl		 PMID:20133819 PMID:24552833 GO_REF:0000107 NCBI chr16:37,712,251...37,827,845
Ensembl chr16:37,712,262...37,827,848 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      anatomical structure development 6646
        lymph vessel development 33
          lymph vessel morphogenesis + 25
          lymphatic endothelial cell differentiation + 8
          venous endothelial cell migration involved in lymph vessel development 0
Path 2
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      anatomical structure development 6646
        multicellular organism development 5353
          system development 4635
            circulatory system development 1387
              vasculature development 905
                lymph vessel development 33
                  lymph vessel morphogenesis + 25
                  lymphatic endothelial cell differentiation + 8
                  venous endothelial cell migration involved in lymph vessel development 0
paths to the root