Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:response to yeast
go back to main search page
Accession:GO:0001878 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a yeast species.
Comment:defined as response to Saccharomycotina (true yeasts). This excludes fission yeast.


show annotations for term's descendants           Sort by:
response to yeast term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ang angiogenin involved_in ISO (PMID:12548285) RGD PMID:12548285 NCBI chr15:24,312,711...24,323,361 JBrowse link
G App amyloid beta precursor protein involved_in IDA PMID:20209079 UniProt PMID:20209079 RGD:10400853 NCBI chr11:37,506,207...37,724,351
Ensembl chr11:24,019,778...24,236,561 		JBrowse link
G Cd86 CD86 molecule IEP RGD PMID:19494083 RGD:2313435 NCBI chr11:64,142,193...64,200,816
Ensembl chr11:64,163,828...64,200,818 		JBrowse link
G Clec4a C-type lectin domain family 4, member A involved_in ISO (PMID:22041900) RGD PMID:22041900 NCBI chr 4:156,340,439...156,434,212
Ensembl chr 4:156,414,688...156,432,402 		JBrowse link
G Clec6a-ps1 C-type lectin domain family 6, member A, pseudogene 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:156,539,408...156,559,032
Ensembl chr 4:156,539,408...156,558,605
Ensembl chr 4:156,539,408...156,558,605 		JBrowse link
G Clec7a C-type lectin domain containing 7A acts_upstream_of_or_within
involved_in		 ISO (PMID:12719478), (PMID:14707091), (PMID:14726497)
(PMID:19136564)		 RGD PMID:12719478 PMID:14707091 PMID:14726497 PMID:19136564 NCBI chr 4:162,902,731...162,913,931
Ensembl chr 4:162,902,732...162,913,897 		JBrowse link
G Crk CRK proto-oncogene, adaptor protein IEP RGD PMID:19958054 RGD:4107734 NCBI chr10:61,028,736...61,054,971
Ensembl chr10:60,530,464...60,553,406 		JBrowse link
G Elane elastase, neutrophil expressed acts_upstream_of_or_within ISO
IEA		 MGI:2182177 (PMID:11907569)
GO_REF:0000107		 RGD
Ensembl		 PMID:11907569 GO_REF:0000107 NCBI chr 7:10,467,877...10,469,725
Ensembl chr 7:9,817,252...9,819,100 		JBrowse link
G Il6 interleukin 6 IEP Probiotic Saccharomyces boulardii RGD PMID:19375719 RGD:8693605 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Mpo myeloperoxidase acts_upstream_of_or_within ISO
IEA		 MGI:2176344 (PMID:10085024)
GO_REF:0000107		 RGD
Ensembl		 PMID:10085024 GO_REF:0000107 NCBI chr10:73,092,124...73,102,057
Ensembl chr10:72,594,661...72,604,819 		JBrowse link
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO
IEA		 MGI:3576788 (PMID:10714686), (PMID:11907569)
GO_REF:0000107		 RGD
Ensembl		 PMID:10714686 PMID:11907569 GO_REF:0000107 NCBI chr12:22,485,382...22,494,647
Ensembl chr12:22,485,451...22,494,646 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 IEP Saccharomyces boulardii RGD PMID:19958054 RGD:4107734 NCBI chr 2:34,612,946...34,697,660
Ensembl chr 2:32,882,032...32,963,631 		JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in ISO (PMID:22041900) RGD PMID:22041900 NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930 		JBrowse link
G Ptx3 pentraxin 3 acts_upstream_of_or_within ISO (PMID:14726497) RGD PMID:14726497 NCBI chr 2:150,487,513...150,493,323
Ensembl chr 2:150,487,513...150,493,323 		JBrowse link
detection of yeast term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec4a C-type lectin domain family 4, member A involved_in ISO (PMID:22041900) RGD PMID:22041900 NCBI chr 4:156,340,439...156,434,212
Ensembl chr 4:156,414,688...156,432,402 		JBrowse link
G Clec4m C-type lectin domain family 4 member M acts_upstream_of_or_within ISO
IEA		 (PMID:14707091)
GO_REF:0000107		 RGD
Ensembl		 PMID:14707091 GO_REF:0000107 NCBI chr12:1,915,902...1,924,529
Ensembl chr12:1,915,919...1,924,539 		JBrowse link
G Clec6a-ps1 C-type lectin domain family 6, member A, pseudogene 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:156,539,408...156,559,032
Ensembl chr 4:156,539,408...156,558,605
Ensembl chr 4:156,539,408...156,558,605 		JBrowse link
G Clec7a C-type lectin domain containing 7A acts_upstream_of_or_within
involved_in		 ISO (PMID:14698225)
(PMID:19136564)		 RGD PMID:14698225 PMID:19136564 NCBI chr 4:162,902,731...162,913,931
Ensembl chr 4:162,902,732...162,913,897 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    biological process involved in interspecies interaction between organisms 2011
      response to other organism 1890
        response to fungus 74
          response to yeast 15
            detection of yeast 4
Path 2
Term Annotations click to browse term
  biological_process 20558
    response to stimulus 11067
      response to external stimulus 2804
        response to external biotic stimulus 1894
          response to other organism 1890
            response to fungus 74
              response to yeast 15
                detection of yeast 4
paths to the root