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ONTOLOGY REPORT - ANNOTATIONS

Term:XY body
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Accession:GO:0001741 term browser browse the term
Definition:A structure found in a male mammalian spermatocyte containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery.
Synonyms:never_in_taxon: NCBITaxon:8782 ! Aves


show annotations for term's descendants           Sort by:
XY body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atr ATR serine/threonine kinase located_in ISO (PMID:18316482), (PMID:31839538) RGD PMID:18316482 PMID:31839538 NCBI chr 8:105,306,299...105,403,742
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Birc2 baculoviral IAP repeat-containing 2 IDA RGD PMID:16343737 RGD:1643531 NCBI chr 8:13,253,697...13,273,672
Ensembl chr 8:4,968,842...4,988,732 		JBrowse link
G Brca1 BRCA1, DNA repair associated located_in IEA
ISO		 GO_REF:0000107
(PMID:31839538)		 Ensembl
RGD		 PMID:31839538 GO_REF:0000107 NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Daxx death-domain associated protein IDA RGD PMID:15349788 RGD:9587797 NCBI chr20:4,971,973...4,978,062
Ensembl chr20:4,970,092...4,975,843 		JBrowse link
G Dmrtc2 DMRT-like family C2 located_in ISO (PMID:17447844) RGD PMID:17447844 NCBI chr 1:89,594,120...89,601,761
Ensembl chr 1:80,466,132...80,473,531 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha located_in ISO (PMID:20577743) RGD PMID:20577743 NCBI chr 6:32,507,316...32,621,678
Ensembl chr 6:26,822,609...26,896,687 		JBrowse link
G Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 located_in ISO (PMID:22699483) RGD PMID:22699483 NCBI chr15:44,210,124...44,230,785
Ensembl chr15:40,034,568...40,055,306
Ensembl chr15:40,034,568...40,055,306 		JBrowse link
G H2ax H2A.X variant histone located_in ISO (PMID:18070917), (PMID:18316482), (PMID:19074312), (PMID:20577743), (PMID:21539824), (PMID:22699483), (PMID:22854038), (PMID:23133398), (PMID:23810942), (PMID:25634095), (PMID:25675407), (PMID:26358182), (PMID:28031483), (PMID:31839538) RGD PMID:18070917 PMID:18316482 PMID:19074312 PMID:20577743 PMID:21539824 More... NCBI chr 8:53,568,718...53,570,072
Ensembl chr 8:44,671,786...44,673,239
Ensembl chr 4:44,671,786...44,673,239 		JBrowse link
G Hsf5 heat shock transcription factor 5 located_in ISO (PMID:37206036), (PMID:38684656) RGD PMID:37206036 PMID:38684656 NCBI chr10:72,913,730...72,957,649
Ensembl chr10:72,417,298...72,460,406 		JBrowse link
G Mael maelstrom spermatogenic transposon silencer located_in
NOT|located_in		 ISO (PMID:16787967)
(PMID:18694567)		 RGD PMID:16787967 PMID:18694567 NCBI chr13:80,990,040...81,029,623
Ensembl chr13:78,457,073...78,496,657 		JBrowse link
G Pbx4 PBX homeobox 4 located_in ISO (PMID:11335119) RGD PMID:11335119 NCBI chr16:19,588,998...19,624,016
Ensembl chr16:19,555,090...19,590,014 		JBrowse link
G Plk4 polo-like kinase 4 located_in IEA
ISO		 GO_REF:0000107
(PMID:22854038)		 Ensembl
RGD		 PMID:22854038 GO_REF:0000107 NCBI chr 2:125,730,480...125,748,894
Ensembl chr 2:123,802,512...123,820,942 		JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase located_in ISO (PMID:15383616) RGD PMID:15383616 NCBI chr 4:147,291,463...147,376,904
Ensembl chr 4:145,735,654...145,821,069 		JBrowse link
G Scml2 Scm polycomb group protein like 2 located_in ISO (PMID:25634095) RGD PMID:25634095 NCBI chr  X:37,331,893...37,486,465
Ensembl chr  X:33,524,530...33,652,742 		JBrowse link
G Sin3b SIN3 transcription regulator family member B located_in ISO (PMID:16787967) RGD PMID:16787967 NCBI chr16:17,157,352...17,194,051
Ensembl chr16:17,123,434...17,159,978 		JBrowse link
G Smarcb1 SWI/SNF related BAF chromatin remodeling complex subunit B1 located_in ISO (PMID:16787967) RGD PMID:16787967 NCBI chr20:12,740,105...12,763,054
Ensembl chr20:12,741,477...12,763,620 		JBrowse link
G Smarcc1 SWI/SNF related BAF chromatin remodeling complex subunit C1 located_in ISO (PMID:16787967) RGD PMID:16787967 NCBI chr 8:118,986,917...119,093,161
Ensembl chr 8:110,111,122...110,214,720 		JBrowse link
G Spdya speedy/RINGO cell cycle regulator family member A located_in ISO (PMID:28031483) RGD PMID:28031483 NCBI chr 6:29,619,415...29,675,030
Ensembl chr 6:23,910,223...23,954,850 		JBrowse link
G Sumo1 small ubiquitin-like modifier 1 located_in IDA
ISO		 (PMID:25634095) RGD PMID:25634095 PMID:15349788 RGD:9587797 NCBI chr 9:68,572,901...68,602,803
Ensembl chr 9:61,077,435...61,108,761 		JBrowse link
G Ube2a ubiquitin-conjugating enzyme E2A located_in ISO (PMID:15383616) RGD PMID:15383616 NCBI chr  X:120,979,993...120,990,773
Ensembl chr  X:116,113,875...116,125,070 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B located_in ISO (PMID:15383616) RGD PMID:15383616 NCBI chr10:36,749,365...36,764,335
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 located_in ISO (PMID:25634095) RGD PMID:25634095 NCBI chr10:7,335,508...7,432,018
Ensembl chr10:6,828,795...6,925,355 		JBrowse link
G Zcwpw1 zinc finger CW-type and PWWP domain containing 1 located_in ISO (PMID:31453335), (PMID:32744506) RGD PMID:31453335 PMID:32744506 NCBI chr12:24,517,428...24,547,942
Ensembl chr12:18,880,633...18,910,711 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21329
    cellular anatomical structure 21034
      organelle 14243
        membraneless organelle 5380
          intracellular membraneless organelle 5380
            chromosome 1404
              sex chromosome 42
                XY body 23
paths to the root