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ONTOLOGY REPORT - ANNOTATIONS

Term:Barr body
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Accession:GO:0001740 term browser browse the term
Definition:A structure found in a female mammalian cell containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery.
Synonyms:xref: NIF_Subcellular:sao1571698684;   Wikipedia:Barr_body
 only_in_taxon: NCBITaxon:40674 ! Mammalia


show annotations for term's descendants           Sort by:
Barr body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H2az1 H2A.Z variant histone 1 NOT|located_in ISO (PMID:11331621) RGD PMID:11331621 NCBI chr 2:229,026,464...229,031,411
Ensembl chr 2:229,028,843...229,031,411 		JBrowse link
G Lrif1 ligand dependent nuclear receptor interacting factor 1 located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:23542155)
(PMID:26391951) 		UniProt
Ensembl
RGD		 PMID:23542155 PMID:26391951 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:196,919,606...197,010,713
Ensembl chr 2:196,919,151...197,010,717 		JBrowse link
G Macroh2a1 macroH2A.1 histone located_in ISO
IEA 		(PMID:11331621), (PMID:18936163)
GO_REF:0000107 		RGD
Ensembl		 PMID:11331621 PMID:18936163 GO_REF:0000107 NCBI chr17:8,484,340...8,547,268
Ensembl chr17:8,484,246...8,547,257 		JBrowse link
G Macroh2a2 macroH2A.2 histone located_in ISO
IEA 		(PMID:11331621)
GO_REF:0000107 		RGD
Ensembl		 PMID:11331621 GO_REF:0000107 NCBI chr20:30,220,975...30,270,652
Ensembl chr20:30,221,011...30,270,652 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 located_in
is_active_in 		ISO
IBA
IEA 		(PMID:23542155)
GO_REF:0000033
GO_REF:0000107
(PMID:18425126), (PMID:26391951) 		RGD
GO_Central
Ensembl		 PMID:18425126 PMID:23542155 PMID:26391951 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:118,690,050...118,837,281
Ensembl chr 9:118,690,057...118,833,452 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19485
    cellular anatomical structure 19353
      organelle 13686
        membraneless organelle 5693
          intracellular membraneless organelle 5693
            chromosome 1463
              nuclear chromosome 234
                Barr body 5
Path 2
Term Annotations click to browse term
  cellular_component 19485
    cellular anatomical structure 19353
      intracellular anatomical structure 14908
        intracellular organelle 13261
          intracellular membraneless organelle 5693
            chromosome 1463
              sex chromosome 40
                X chromosome 9
                  Barr body 5
paths to the root