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ONTOLOGY REPORT - ANNOTATIONS

Term:Barr body
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Accession:GO:0001740 term browser browse the term
Definition:A structure found in a female mammalian cell containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery.
Synonyms:xref: NIF_Subcellular:sao1571698684;   Wikipedia:Barr_body
 only_in_taxon: NCBITaxon:40674 ! Mammalia


show annotations for term's descendants           Sort by:
Barr body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H2az1 H2A.Z variant histone 1 NOT|located_in ISO (PMID:11331621) RGD PMID:11331621 NCBI chr 2:226,355,668...226,357,984
Ensembl chr 2:226,355,708...226,358,485 		JBrowse link
G H3f3a H3.3 histone A located_in ISO (PMID:15657431) RGD PMID:15657431 NCBI chr13:92,533,289...92,544,902
Ensembl chr13:92,533,298...92,544,908 		JBrowse link
G Lrif1 ligand dependent nuclear receptor interacting factor 1 located_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:23542155)
(PMID:26391951)		 UniProt
Ensembl
RGD		 PMID:23542155 PMID:26391951 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:194,231,397...194,322,489
Ensembl chr 2:194,230,951...194,322,483 		JBrowse link
G Macroh2a1 macroH2A.1 histone located_in ISO (PMID:11331621), (PMID:18936163) RGD PMID:11331621 PMID:18936163 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072 		JBrowse link
G Macroh2a2 macroH2A.2 histone located_in ISO (PMID:11331621) RGD PMID:11331621 NCBI chr20:29,678,194...29,727,867
Ensembl chr20:29,678,222...29,727,891 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 located_in
is_active_in		 ISO
IBA		 (PMID:23542155)
GO_REF:0000033
(PMID:18425126), (PMID:26391951)		 RGD
GO_Central		 PMID:18425126 PMID:23542155 PMID:26391951 GO_REF:0000033 NCBI chr 9:111,243,445...111,387,272
Ensembl chr 9:111,247,702...111,349,665 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      organelle 14241
        membraneless organelle 5379
          intracellular membraneless organelle 5379
            chromosome 1403
              nuclear chromosome 230
                Barr body 6
Path 2
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      intracellular anatomical structure 15547
        intracellular organelle 13828
          intracellular membraneless organelle 5379
            chromosome 1403
              sex chromosome 42
                X chromosome 11
                  Barr body 6
paths to the root