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ONTOLOGY REPORT - ANNOTATIONS

Term:metanephros development
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Accession:GO:0001656 term browser browse the term
Definition:The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. In mammals, the metanephros is the excretory organ of the fetus, which develops into the mature kidney and is formed from the rear portion of the nephrogenic cord. The metanephros is an endocrine and metabolic organ that filters the blood and excretes the end products of body metabolism in the form of urine.


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metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aph1a aph-1 homolog A, gamma secretase subunit acts_upstream_of_or_within ISO (PMID:12952904) RGD PMID:12952904 NCBI chr 2:186,123,023...186,130,886
Ensembl chr 2:183,438,434...183,441,955 		JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:1857134|MGI:2156165 (PMID:7840250), (PMID:8623928) RGD PMID:7840250 PMID:8623928 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO
IEA		 MGI:2158495 (PMID:12631064)
GO_REF:0000107		 RGD
Ensembl		 PMID:12631064 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in ISO
IEA		 (PMID:18437684)
GO_REF:0000107		 RGD
Ensembl		 PMID:18437684 GO_REF:0000107 NCBI chr 3:182,059,318...182,135,273
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Ctsh cathepsin H involved_in IEP PMID:16153003 UniProt PMID:16153003 RGD:8554708 NCBI chr 8:99,488,756...99,507,639
Ensembl chr 8:90,608,941...90,627,824 		JBrowse link
G Ctss cathepsin S involved_in IEP PMID:16153003 UniProt PMID:16153003 RGD:8554708 NCBI chr 2:185,775,316...185,803,440
Ensembl chr 2:183,086,437...183,114,483 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:1857803|MGI:2150426 (PMID:10072433), (PMID:16018995) RGD PMID:10072433 PMID:16018995 NCBI chr 5:9,646,599...9,884,609
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Fbn1 fibrillin 1 IMP RGD PMID:9815129 RGD:632672 NCBI chr 3:133,007,693...133,204,277
Ensembl chr 3:112,554,925...112,750,889 		JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in ISO
IEA		 (PMID:18437684)
GO_REF:0000107		 RGD
Ensembl		 PMID:18437684 GO_REF:0000107 NCBI chr 2:52,533,939...52,610,980
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in ISO
IEA		 (PMID:18437684)
GO_REF:0000107		 RGD
Ensembl		 PMID:18437684 GO_REF:0000107 NCBI chr 1:254,533,504...254,539,605
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857740 (PMID:16498405) RGD PMID:16498405 NCBI chr19:66,094,718...66,097,420
Ensembl chr19:49,185,662...49,188,737 		JBrowse link
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within ISO
IEA		 (PMID:12729564)
GO_REF:0000107		 RGD
Ensembl		 PMID:12729564 GO_REF:0000107 NCBI chr 7:1,896,229...1,909,147
Ensembl chr 7:1,311,732...1,320,725 		JBrowse link
G Gdf6 growth differentiation factor 6 acts_upstream_of_or_within_positive_effect
involved_in		 ISO
IEA		 (PMID:32737436)
GO_REF:0000107		 RGD
Ensembl		 PMID:32737436 GO_REF:0000107 NCBI chr 5:27,793,561...27,809,884
Ensembl chr 5:22,996,246...23,012,567 		JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:8657308)
MGI:109442|MGI:1315205|MGI:2136843 (PMID:15130495), (PMID:17537792)		 UniProt
Ensembl
RGD		 PMID:8657308 PMID:15130495 PMID:17537792 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:56,895,010...56,917,209 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO
IEA		 MGI:98297 (PMID:16396903)
GO_REF:0000107		 RGD
Ensembl		 PMID:16396903 GO_REF:0000107 NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Greb1l GREB1 like retinoic acid receptor coactivator acts_upstream_of_or_within ISO
IEA		 (PMID:29100091)
GO_REF:0000107		 RGD
Ensembl		 PMID:29100091 GO_REF:0000107 NCBI chr18:1,665,468...1,902,291
Ensembl chr18:1,392,725...1,628,067 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO
IEA		 MGI:96193|MGI:96203 (PMID:12050119)
GO_REF:0000107		 RGD
Ensembl		 PMID:12050119 GO_REF:0000107 NCBI chr 4:82,673,139...82,676,801
Ensembl chr 4:81,342,528...81,346,232 		JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within ISO
IEA		 MGI:96172|MGI:96203 (PMID:12050119)
GO_REF:0000107		 RGD
Ensembl		 PMID:12050119 GO_REF:0000107 NCBI chr 7:135,969,707...135,973,222
Ensembl chr 7:134,091,552...134,094,738 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172|MGI:96193 (PMID:12050119) RGD PMID:12050119 NCBI chr 3:79,992,394...79,994,688
Ensembl chr 3:59,585,039...59,586,783 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO MGI:2384134 (PMID:15569159) RGD PMID:15569159 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Id3 inhibitor of DNA binding 3 involved_in ISO (PMID:7655079) RGD PMID:7655079 NCBI chr 5:153,656,253...153,657,860
Ensembl chr 5:148,372,762...148,374,349 		JBrowse link
G Irx1 iroquois homeobox 1 involved_in ISO
IEA		 (PMID:17875669)
GO_REF:0000107		 RGD
Ensembl		 PMID:17875669 GO_REF:0000107 NCBI chr 1:33,123,122...33,128,951
Ensembl chr 1:31,294,615...31,300,444 		JBrowse link
G Irx2 iroquois homeobox 2 involved_in ISO (PMID:17875669) RGD PMID:17875669 NCBI chr 1:32,489,512...32,494,930
Ensembl chr 1:30,660,960...30,666,378 		JBrowse link
G Irx3 iroquois homeobox 3 involved_in ISO
IEA		 (PMID:17875669)
GO_REF:0000107		 RGD
Ensembl		 PMID:17875669 GO_REF:0000107 NCBI chr19:31,384,803...31,388,241
Ensembl chr19:15,211,878...15,215,317 		JBrowse link
G Itga8 integrin subunit alpha 8 acts_upstream_of_or_within ISO
IEA		 MGI:107430|MGI:1345139|MGI:2181699 (PMID:17537792)
GO_REF:0000107		 RGD
Ensembl		 PMID:17537792 GO_REF:0000107 NCBI chr17:80,213,139...80,410,633
Ensembl chr17:75,304,008...75,501,510 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISO
IEA		 (PMID:7909549)
GO_REF:0000107		 RGD
Ensembl		 PMID:7909549 GO_REF:0000107 NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
MGI:1857444 (PMID:7926784)		 HGNC-UCL
Ensembl
RGD		 PMID:7926784 GO_REF:0000024 GO_REF:0000107 NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658 		JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISO (PMID:9142502) RGD PMID:9142502 NCBI chr15:50,883,661...50,886,253
Ensembl chr15:44,473,851...44,476,441 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 acts_upstream_of_or_within ISO
IEA		 MGI:3613748 (PMID:16223478)
GO_REF:0000107		 RGD
Ensembl		 PMID:16223478 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Osr2 odd-skipped related transcription factor 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:11520675)		 UniProt
Ensembl
RGD		 PMID:11520675 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:68,372,500...68,380,195
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
G Pax2 paired box 2 acts_upstream_of_or_within ISO MGI:1857673|MGI:97492 (PMID:12435636), (PMID:8575306) RGD PMID:8575306 PMID:12435636 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:97486 (PMID:12435636)
GO_REF:0000107
(PMID:1723950)		 RGD
Ensembl		 PMID:1723950 PMID:12435636 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
G Pds5a PDS5 cohesin associated factor A acts_upstream_of_or_within ISO MGI:3847257 (PMID:19412548) RGD PMID:19412548 NCBI chr14:42,905,734...43,004,740
Ensembl chr14:42,552,647...42,648,669 		JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO
IEA		 (PMID:17473173)
GO_REF:0000107		 RGD
Ensembl		 PMID:17473173 GO_REF:0000107 NCBI chr 5:7,969,931...7,998,834
Ensembl chr 5:3,188,445...3,215,572 		JBrowse link
G Robo2 roundabout guidance receptor 2 acts_upstream_of_or_within ISO MGI:3043127 (PMID:15130495) RGD PMID:15130495 NCBI chr11:26,015,919...27,583,750
Ensembl chr11:12,528,951...13,041,536 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:12399320)		 UniProt
Ensembl
RGD		 PMID:12399320 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Six2 SIX homeobox 2 acts_upstream_of_or_within ISO
IEA		 MGI:3691857 (PMID:17036046)
GO_REF:0000107		 RGD
Ensembl		 PMID:17036046 GO_REF:0000107 NCBI chr 6:14,727,756...14,734,219
Ensembl chr 6:8,967,157...8,981,193 		JBrowse link
G Slc5a1 solute carrier family 5 member 1 acts_upstream_of_or_within ISO (PMID:10997927) RGD PMID:10997927 NCBI chr14:81,778,495...81,843,084
Ensembl chr14:77,553,843...77,618,547 		JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within ISO MGI:2179460 (PMID:15130495) RGD PMID:15130495 NCBI chr14:66,829,661...67,168,517
Ensembl chr14:62,617,067...62,955,948 		JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in ISO
IEA		 (PMID:20960469)
GO_REF:0000107		 RGD
Ensembl		 PMID:20960469 GO_REF:0000107 NCBI chr 5:19,814,345...19,819,859
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 acts_upstream_of_or_within ISO
IEA		 MGI:109442 (PMID:17537792)
GO_REF:0000107		 RGD
Ensembl		 PMID:17537792 GO_REF:0000107 NCBI chr 2:122,484,995...122,490,008
Ensembl chr 2:120,556,706...120,566,189 		JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 involved_in ISO (PMID:18776146) RGD PMID:18776146 NCBI chr 1:98,525,584...98,597,428
Ensembl chr 1:89,381,858...89,460,874 		JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO
IEA		 MGI:1857453 (PMID:7990960)
GO_REF:0000107		 RGD
Ensembl		 PMID:7990960 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
G Wt1 WT1 transcription factor acts_upstream_of_or_within
involved_in		 ISO MGI:1857268|MGI:2183640|MGI:2183642 (PMID:10322633), (PMID:11509181)
(PMID:8395349)		 RGD PMID:8395349 PMID:10322633 PMID:11509181 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
cell migration involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf6 growth differentiation factor 6 acts_upstream_of_or_within_positive_effect ISO
IEA		 (PMID:32737436)
GO_REF:0000107		 RGD
Ensembl		 PMID:32737436 GO_REF:0000107 NCBI chr 5:27,793,561...27,809,884
Ensembl chr 5:22,996,246...23,012,567 		JBrowse link
cell proliferation involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpc3 glypican 3 acts_upstream_of_or_within ISO
IEA		 MGI:2159356 (PMID:10402475)
GO_REF:0000107		 RGD
Ensembl		 PMID:10402475 GO_REF:0000107 NCBI chr  X:136,789,770...137,157,598
Ensembl chr  X:131,868,990...132,236,798 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within ISO
IEA		 MGI:1857447 (PMID:19809516)
GO_REF:0000107		 RGD
Ensembl		 PMID:19809516 GO_REF:0000107 NCBI chr17:1,548,449...1,613,461
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
mesenchymal cell apoptotic process involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B acts_upstream_of ISO
IEA		 MGI:1857856 (PMID:20040500)
GO_REF:0000107		 RGD
Ensembl		 PMID:20040500 GO_REF:0000107 NCBI chr10:69,233,377...69,287,360
Ensembl chr10:68,735,894...68,789,888 		JBrowse link
G Wt1 WT1 transcription factor acts_upstream_of ISO MGI:1857268 (PMID:8395349) RGD PMID:8395349 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:3603818 (PMID:24550112) RGD PMID:24550112 NCBI chr19:34,179,316...34,196,278
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
mesenchymal to epithelial transition involved in metanephric renal vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smo smoothened, frizzled class receptor involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:16396903)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:16396903 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor involved_in IEA
ISO
IDA		 GO_REF:0000107
(PMID:10322633)
PMID:17522159		 Ensembl
RGD		 PMID:10322633 PMID:17522159 GO_REF:0000107, RGD:8656002 NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:56,895,010...56,917,209 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:17522159) RGD PMID:17522159 NCBI chr 3:120,966,639...120,978,319
Ensembl chr 3:100,512,313...100,524,082 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:10322633)		 UniProt
RGD		 PMID:10322633 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:8861958) RGD PMID:8861958 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in
acts_upstream_of		 ISO
IEA		 (PMID:11511981)
GO_REF:0000107
(PMID:11688560)
MGI:3603818 (PMID:24550112)		 RGD
Ensembl		 PMID:11511981 PMID:11688560 PMID:24550112 GO_REF:0000107 NCBI chr19:34,179,316...34,196,278
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
G Six2 SIX homeobox 2 involved_in ISO
IEA		 (PMID:10322633)
GO_REF:0000107		 RGD
Ensembl		 PMID:10322633 GO_REF:0000107 NCBI chr 6:14,727,756...14,734,219
Ensembl chr 6:8,967,157...8,981,193 		JBrowse link
metanephric ascending thin limb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in ISO
IEA		 (PMID:11891195)
GO_REF:0000107		 RGD
Ensembl		 PMID:11891195 GO_REF:0000107 NCBI chr10:14,077,733...14,125,682
Ensembl chr10:13,573,021...13,621,128 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:5,541,821...5,585,140
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
G Pou3f3 POU class 3 homeobox 3 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:12925600)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:12925600 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:52,438,026...52,441,152
Ensembl chr 9:44,945,872...44,948,992 		JBrowse link
G Umod uromodulin involved_in ISO
IEA		 (PMID:18618131)
GO_REF:0000107		 RGD
Ensembl		 PMID:18618131 GO_REF:0000107 NCBI chr 1:183,247,676...183,261,665
Ensembl chr 1:173,816,339...173,830,302 		JBrowse link
metanephric cap mesenchymal cell proliferation involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:18835385)		 UniProt
Ensembl
RGD		 PMID:18835385 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
metanephric capsule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:15634693)		 UniProt
Ensembl
RGD		 PMID:15634693 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:31,436,802...31,439,222
Ensembl chr 2:29,702,558...29,704,978 		JBrowse link
metanephric capsule specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:15634693)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:15634693 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:31,436,802...31,439,222
Ensembl chr 2:29,702,558...29,704,978 		JBrowse link
metanephric collecting duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b1 aldo-keto reductase family 1 member B1 acts_upstream_of_or_within ISO MGI:2183239 (PMID:16449351) RGD PMID:16449351 NCBI chr 4:63,899,222...63,913,315
Ensembl chr 4:62,932,031...62,946,157 		JBrowse link
G Aqp2 aquaporin 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18618131)		 Ensembl
RGD		 PMID:18618131 GO_REF:0000107 NCBI chr 7:132,590,286...132,595,321
Ensembl chr 7:130,711,413...130,716,468 		JBrowse link
G Calb1 calbindin 1 involved_in ISO
IEA		 (PMID:18618131)
GO_REF:0000107		 RGD
Ensembl		 PMID:18618131 GO_REF:0000107 NCBI chr 5:34,172,612...34,199,555
Ensembl chr 5:29,375,642...29,402,431 		JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within ISO
IEA		 MGI:3757646 (PMID:17765678)
GO_REF:0000107		 RGD
Ensembl		 PMID:17765678 GO_REF:0000107 NCBI chr15:125,287...237,334
Ensembl chr15:75,786...187,837 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:10980123)		 UniProt
RGD		 PMID:10980123 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in ISO
IEA		 (PMID:11891195)
GO_REF:0000107		 RGD
Ensembl		 PMID:11891195 GO_REF:0000107 NCBI chr10:14,077,733...14,125,682
Ensembl chr10:13,573,021...13,621,128 		JBrowse link
G Ptch1 patched 1 involved_in ISO
IEA		 (PMID:17850284)
GO_REF:0000107		 RGD
Ensembl		 PMID:17850284 GO_REF:0000107 NCBI chr17:1,548,449...1,613,461
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO		 GO_REF:0000107
(PMID:17850284)		 Ensembl
RGD		 PMID:17850284 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:3793280 (PMID:19060336) RGD PMID:19060336 NCBI chr 7:118,514,684...118,559,316
Ensembl chr 7:116,634,814...116,679,581 		JBrowse link
metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 involved_in IEP PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:1337742) RGD PMID:1337742 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in IEP PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:54,499,964...54,538,843 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISO (PMID:18618131) RGD PMID:18618131 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
metanephric connecting tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb1 calbindin 1 involved_in ISO
IEA		 (PMID:18618131)
GO_REF:0000107		 RGD
Ensembl		 PMID:18618131 GO_REF:0000107 NCBI chr 5:34,172,612...34,199,555
Ensembl chr 5:29,375,642...29,402,431 		JBrowse link
metanephric cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:5,541,821...5,585,140
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
metanephric DCT cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou3f3 POU class 3 homeobox 3 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:12925600)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:12925600 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:52,438,026...52,441,152
Ensembl chr 9:44,945,872...44,948,992 		JBrowse link
metanephric descending thin limb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 involved_in ISO
IEA		 (PMID:18618131)
GO_REF:0000107		 RGD
Ensembl		 PMID:18618131 GO_REF:0000107 NCBI chr 4:85,812,784...85,824,964
Ensembl chr 4:84,482,512...84,494,690 		JBrowse link
metanephric distal convoluted tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb1 calbindin 1 involved_in ISO
IEA		 (PMID:18618131)
GO_REF:0000107		 RGD
Ensembl		 PMID:18618131 GO_REF:0000107 NCBI chr 5:34,172,612...34,199,555
Ensembl chr 5:29,375,642...29,402,431 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17314325)		 UniProt
RGD		 PMID:17314325 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:17314325)		 UniProt
Ensembl
RGD		 PMID:17314325 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
G Umod uromodulin involved_in ISO
IEA		 (PMID:18618131)
GO_REF:0000107		 RGD
Ensembl		 PMID:18618131 GO_REF:0000107 NCBI chr 1:183,247,676...183,261,665
Ensembl chr 1:173,816,339...173,830,302 		JBrowse link
metanephric distal tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:5,541,821...5,585,140
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
metanephric distal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in ISO
IEA		 (PMID:11891195)
GO_REF:0000107		 RGD
Ensembl		 PMID:11891195 GO_REF:0000107 NCBI chr10:14,077,733...14,125,682
Ensembl chr10:13,573,021...13,621,128 		JBrowse link
metanephric epithelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:18835385)		 UniProt
Ensembl
RGD		 PMID:18835385 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Pax2 paired box 2 involved_in ISO (PMID:7856737) RGD PMID:7856737 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:7856737) RGD PMID:7856737 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:3793280 (PMID:19060336) RGD PMID:19060336 NCBI chr 7:118,514,684...118,559,316
Ensembl chr 7:116,634,814...116,679,581 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISO
IEA		 (PMID:7856737)
GO_REF:0000107		 RGD
Ensembl		 PMID:7856737 GO_REF:0000107 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
metanephric glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 acts_upstream_of_or_within ISO
IEA		 MGI:2138070 (PMID:16886065), (PMID:7670489)
GO_REF:0000107		 RGD
Ensembl		 PMID:7670489 PMID:16886065 GO_REF:0000107 NCBI chr 8:118,056,899...118,069,090
Ensembl chr 8:109,178,409...109,190,549 		JBrowse link
metanephric glomerular capillary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfra platelet derived growth factor receptor alpha involved_in ISS
ISO
IEA		 GO_REF:0000024
UniProtKB:P05622 (PMID:11239463)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:11239463 GO_REF:0000024 GO_REF:0000107 NCBI chr14:33,360,027...33,408,604
Ensembl chr14:33,005,839...33,054,335 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in ISS
ISO		 GO_REF:0000024
UniProtKB:P26618 (PMID:11239463)		 UniProt
RGD		 PMID:11239463 GO_REF:0000024 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:54,499,964...54,538,843 		JBrowse link
G Tcf21 transcription factor 21 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:12619136)		 UniProt
Ensembl
RGD		 PMID:12619136 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:24,520,499...24,523,358
Ensembl chr 1:22,701,353...22,704,202 		JBrowse link
metanephric glomerular endothelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor subunit B involved_in ISO (PMID:9693135) RGD PMID:9693135 NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:111,540,345...111,557,984 		JBrowse link
metanephric glomerular mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor subunit B involved_in ISS
ISO		 GO_REF:0000024
(PMID:15084468)		 UniProt
RGD		 PMID:15084468 GO_REF:0000024 NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:111,540,345...111,557,984 		JBrowse link
metanephric glomerular mesangial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd34 CD34 molecule involved_in ISO (PMID:1868864) RGD PMID:1868864 NCBI chr13:109,008,786...109,029,317
Ensembl chr13:106,480,043...106,499,832 		JBrowse link
metanephric glomerular mesangial cell proliferation involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor subunit B involved_in ISO (PMID:9693135) RGD PMID:9693135 NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:111,540,345...111,557,984 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in ISS
ISO		 GO_REF:0000024
(PMID:9693135)		 UniProt
RGD		 PMID:9693135 GO_REF:0000024 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:54,499,964...54,538,843 		JBrowse link
metanephric glomerular mesangium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfrb platelet derived growth factor receptor beta involved_in ISO (PMID:9693135) RGD PMID:9693135 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:54,499,964...54,538,843 		JBrowse link
metanephric glomerulus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in ISO
IEA		 (PMID:21523854)
GO_REF:0000107		 RGD
Ensembl		 PMID:21523854 GO_REF:0000107 NCBI chr 3:116,901,968...117,004,584
Ensembl chr 3:96,447,858...96,548,899 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in IEP PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
metanephric glomerulus morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfrb platelet derived growth factor receptor beta involved_in IEP PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:54,499,964...54,538,843 		JBrowse link
metanephric glomerulus vasculature development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 involved_in ISO
IEA		 (PMID:18618131)
GO_REF:0000107		 RGD
Ensembl		 PMID:18618131 GO_REF:0000107 NCBI chr 4:85,812,784...85,824,964
Ensembl chr 4:84,482,512...84,494,690 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:18835385)		 UniProt
Ensembl
RGD		 PMID:18835385 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
metanephric interstitial fibroblast development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:18835385)		 UniProt
Ensembl
RGD		 PMID:18835385 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
metanephric loop of Henle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou3f3 POU class 3 homeobox 3 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:12925600)		 UniProt
Ensembl
RGD		 PMID:12925600 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:52,438,026...52,441,152
Ensembl chr 9:44,945,872...44,948,992 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:3793280 (PMID:19060336) RGD PMID:19060336 NCBI chr 7:118,514,684...118,559,316
Ensembl chr 7:116,634,814...116,679,581 		JBrowse link
metanephric macula densa development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou3f3 POU class 3 homeobox 3 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:12925600)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:12925600 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:52,438,026...52,441,152
Ensembl chr 9:44,945,872...44,948,992 		JBrowse link
metanephric mesenchymal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:16790474)		 UniProt
Ensembl
RGD		 PMID:16790474 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16368682)		 UniProt
RGD		 PMID:16368682 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Tcf21 transcription factor 21 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:12619136)		 UniProt
Ensembl
RGD		 PMID:12619136 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:24,520,499...24,523,358
Ensembl chr 1:22,701,353...22,704,202 		JBrowse link
metanephric mesenchymal cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfrb platelet derived growth factor receptor beta involved_in IDA PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:54,499,964...54,538,843 		JBrowse link
metanephric mesenchymal cell proliferation involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 involved_in ISO
IEA		 UniProtKB:P97471 (PMID:15342483)
GO_REF:0000107		 RGD
Ensembl		 PMID:15342483 GO_REF:0000107 NCBI chr 3:182,059,318...182,135,273
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:12399320)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:12399320 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
metanephric mesenchyme development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:20171952)		 UniProt
Ensembl
RGD		 PMID:20171952 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20171952)		 UniProt
RGD		 PMID:20171952 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in IEP PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:54,499,964...54,538,843 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:5,541,821...5,585,140
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
G Six1 SIX homeobox 1 involved_in ISO
IEA		 (PMID:17300925)
GO_REF:0000107		 RGD
Ensembl		 PMID:17300925 GO_REF:0000107 NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (PMID:17300925) RGD PMID:17300925 NCBI chr 6:97,538,202...97,551,872
Ensembl chr 6:91,802,329...91,815,992 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISS
ISO		 GO_REF:0000024
(PMID:8395349)		 UniProt
RGD		 PMID:8395349 GO_REF:0000024 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
metanephric mesenchyme morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 involved_in ISO
IEA		 UniProtKB:P97471 (PMID:15342483)
GO_REF:0000107		 RGD
Ensembl		 PMID:15342483 GO_REF:0000107 NCBI chr 3:182,059,318...182,135,273
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:16790474)		 UniProt
Ensembl
RGD		 PMID:16790474 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Smad4 SMAD family member 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15342483)		 Ensembl
RGD		 PMID:15342483 GO_REF:0000107 NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
metanephric nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15634693)		 Ensembl
RGD		 PMID:15634693 GO_REF:0000107 NCBI chr 2:31,436,802...31,439,222
Ensembl chr 2:29,702,558...29,704,978 		JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISO (PMID:7555706) RGD PMID:7555706 NCBI chr17:24,230,064...24,253,219
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in ISO
IEA		 (PMID:7555706)
GO_REF:0000107		 RGD
Ensembl		 PMID:7555706 GO_REF:0000107 NCBI chr 9:29,282,703...29,312,568
Ensembl chr 9:21,786,258...21,814,520 		JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO
IEA		 MGI:1857453 (PMID:18346943)
GO_REF:0000107		 RGD
Ensembl		 PMID:18346943 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO
IEA		 MGI:4399122 (PMID:19830824)
GO_REF:0000107		 RGD
Ensembl		 PMID:19830824 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
metanephric nephron tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:18835385)		 UniProt
Ensembl
RGD		 PMID:18835385 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
metanephric nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17314325)		 UniProt
RGD		 PMID:17314325 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:17314325)		 UniProt
Ensembl
RGD		 PMID:17314325 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
MGI:98371 (PMID:21212101)		 UniProt
Ensembl
RGD		 PMID:21212101 GO_REF:0000024 GO_REF:0000107 NCBI chr10:15,089,357...15,094,345
Ensembl chr10:14,584,829...14,589,818 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
MGI:98370 (PMID:21212101)		 UniProt
Ensembl
RGD		 PMID:21212101 GO_REF:0000024 GO_REF:0000107 NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
metanephric nephron tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15465493)		 Ensembl
RGD		 PMID:15465493 GO_REF:0000107 NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (PMID:15465493) RGD PMID:15465493 NCBI chr 5:170,804,511...170,807,988
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in ISO
IEA		 (PMID:21523854)
GO_REF:0000107		 RGD
Ensembl		 PMID:21523854 GO_REF:0000107 NCBI chr 3:116,901,968...117,004,584
Ensembl chr 3:96,447,858...96,548,899 		JBrowse link
metanephric part of ureteric bud development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb1 calbindin 1 involved_in ISO
IEA		 (PMID:18618131)
GO_REF:0000107		 RGD
Ensembl		 PMID:18618131 GO_REF:0000107 NCBI chr 5:34,172,612...34,199,555
Ensembl chr 5:29,375,642...29,402,431 		JBrowse link
G Foxj1 forkhead box J1 involved_in ISO
IEA		 (PMID:9530170)
GO_REF:0000107		 RGD
Ensembl		 PMID:9530170 GO_REF:0000107 NCBI chr10:102,065,163...102,069,945
Ensembl chr10:101,566,304...101,570,237 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in IEP PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:5,541,821...5,585,140
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
metanephric podocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 acts_upstream_of_or_within ISO
IEA		 MGI:2138070 (PMID:16886065)
GO_REF:0000107		 RGD
Ensembl		 PMID:16886065 GO_REF:0000107 NCBI chr 8:118,056,899...118,069,090
Ensembl chr 8:109,178,409...109,190,549 		JBrowse link
G Nphs2 NPHS2 stomatin family member, podocin involved_in ISO
IEA		 (PMID:11786407)
GO_REF:0000107		 RGD
Ensembl		 PMID:11786407 GO_REF:0000107 NCBI chr13:70,993,622...71,011,585
Ensembl chr13:68,448,926...68,461,313 		JBrowse link
metanephric proximal convoluted tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 IEP RGD PMID:7733320 RGD:2326090 NCBI chr 8:62,876,003...62,905,080
Ensembl chr 8:53,979,813...54,008,855 		JBrowse link
metanephric proximal convoluted tubule segment 2 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 involved_in ISO
IEA		 (PMID:18618131)
GO_REF:0000107		 RGD
Ensembl		 PMID:18618131 GO_REF:0000107 NCBI chr 4:85,812,784...85,824,964
Ensembl chr 4:84,482,512...84,494,690 		JBrowse link
metanephric proximal straight tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 involved_in ISO
IEA		 (PMID:18618131)
GO_REF:0000107		 RGD
Ensembl		 PMID:18618131 GO_REF:0000107 NCBI chr 4:85,812,784...85,824,964
Ensembl chr 4:84,482,512...84,494,690 		JBrowse link
metanephric proximal tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anpep alanyl aminopeptidase, membrane IEP RGD PMID:30645697 RGD:155631307 NCBI chr 1:143,176,645...143,219,447
Ensembl chr 1:133,767,332...133,785,789 		JBrowse link
G Aqp1 aquaporin 1 IEP RGD PMID:30645697 RGD:155631307 NCBI chr 4:85,812,784...85,824,964
Ensembl chr 4:84,482,512...84,494,690 		JBrowse link
G Lrp2 LDL receptor related protein 2 IEP RGD PMID:30645697 RGD:155631307 NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:54,189,308...54,346,708 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in ISO
IEA		 (PMID:11891195)
GO_REF:0000107		 RGD
Ensembl		 PMID:11891195 GO_REF:0000107 NCBI chr10:14,077,733...14,125,682
Ensembl chr10:13,573,021...13,621,128 		JBrowse link
G Slc15a1 solute carrier family 15 member 1 IEP RGD PMID:30645697 RGD:155631307 NCBI chr15:104,944,461...104,991,316
Ensembl chr15:98,537,641...98,582,545 		JBrowse link
G Slc15a2 solute carrier family 15 member 2 IEP RGD PMID:30645697 RGD:155631307 NCBI chr11:77,519,565...77,548,609
Ensembl chr11:64,014,182...64,043,225 		JBrowse link
G Slc22a1 solute carrier family 22 member 1 IEP RGD PMID:30645697 RGD:155631307 NCBI chr 1:50,624,339...50,651,437
Ensembl chr 1:48,076,666...48,103,678 		JBrowse link
G Slc22a6 solute carrier family 22 member 6 IEP RGD PMID:30645697 RGD:155631307 NCBI chr 1:214,951,493...214,960,317
Ensembl chr 1:205,522,729...205,531,173 		JBrowse link
G Slc2a5 solute carrier family 2 member 5 IEP RGD PMID:30645697 RGD:155631307 NCBI chr 5:165,857,412...165,892,928
Ensembl chr 5:160,583,234...160,611,106 		JBrowse link
G Slc4a4 solute carrier family 4 member 4 IEP RGD PMID:30645697 RGD:155631307 NCBI chr14:19,125,394...19,577,379
Ensembl chr14:18,845,159...19,272,883 		JBrowse link
metanephric renal vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 involved_in ISO
IEA		 (PMID:7909549)
GO_REF:0000107		 RGD
Ensembl		 PMID:7909549 GO_REF:0000107 NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
metanephric S-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 involved_in IEP
IEA
ISO		 PMID:9496787
GO_REF:0000107
(PMID:7909549)		 Ensembl
RGD		 PMID:7909549 PMID:9496787 GO_REF:0000107, RGD:8553921 NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:1337742) RGD PMID:1337742 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in IEP PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:54,499,964...54,538,843 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:5,541,821...5,585,140
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISO
IEA
ISS		 UniProtKB:P22561 (PMID:10101119)
(PMID:10101119), (PMID:18618131)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:10101119 PMID:18618131 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
metanephric smooth muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:18835385)		 UniProt
Ensembl
RGD		 PMID:18835385 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:5,541,821...5,585,140
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
metanephric thick ascending limb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou3f3 POU class 3 homeobox 3 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:12925600)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:12925600 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:52,438,026...52,441,152
Ensembl chr 9:44,945,872...44,948,992 		JBrowse link
G Umod uromodulin involved_in ISO
IEA		 (PMID:18618131)
GO_REF:0000107		 RGD
Ensembl		 PMID:18618131 GO_REF:0000107 NCBI chr 1:183,247,676...183,261,665
Ensembl chr 1:173,816,339...173,830,302 		JBrowse link
metanephric tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtss1 MTSS I-BAR domain containing 1 acts_upstream_of_or_within ISO MGI:5319219 (PMID:21406566) RGD PMID:21406566 NCBI chr 7:92,378,228...92,517,444
Ensembl chr 7:90,488,754...90,627,968 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO
IEA		 (PMID:8787755)
GO_REF:0000107		 RGD
Ensembl		 PMID:8787755 GO_REF:0000107 NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437 (PMID:16054034) RGD PMID:16054034 NCBI chr10:89,135,362...89,157,065
Ensembl chr10:88,635,331...88,657,035 		JBrowse link
metanephric tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO
IEA		 MGI:1857453 (PMID:21350016)
GO_REF:0000107		 RGD
Ensembl		 PMID:21350016 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437 (PMID:21350016) RGD PMID:21350016 NCBI chr10:89,135,362...89,157,065
Ensembl chr10:88,635,331...88,657,035 		JBrowse link
metanephric tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcr2 C-X-C motif chemokine receptor 2 IMP RGD PMID:17634442 RGD:7257700 NCBI chr 9:83,178,645...83,185,017
Ensembl chr 9:75,729,115...75,739,425 		JBrowse link
metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO
IEA		 (PMID:19060336)
GO_REF:0000107		 RGD
Ensembl		 PMID:19060336 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO
IEA		 MGI:1859647 (PMID:11062007)
GO_REF:0000107		 RGD
Ensembl		 PMID:11062007 GO_REF:0000107 NCBI chr 2:52,533,939...52,610,980
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 acts_upstream_of_or_within ISO
IEA		 MGI:5463442 (PMID:23469164)
GO_REF:0000107		 RGD
Ensembl		 PMID:23469164 GO_REF:0000107 NCBI chr14:13,095,370...13,506,895
Ensembl chr14:12,793,599...13,200,726 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:3793280 (PMID:19060336) RGD PMID:19060336 NCBI chr 7:118,514,684...118,559,316
Ensembl chr 7:116,634,814...116,679,581 		JBrowse link
negative regulation of apoptotic process involved in metanephric collecting duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17314325)		 UniProt
RGD		 PMID:17314325 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:17314325)		 UniProt
Ensembl
RGD		 PMID:17314325 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
negative regulation of apoptotic process involved in metanephric nephron tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17314325)		 UniProt
RGD		 PMID:17314325 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:17314325)		 UniProt
Ensembl
RGD		 PMID:17314325 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17314325)		 UniProt
RGD		 PMID:17314325 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:17314325)		 UniProt
Ensembl
RGD		 PMID:17314325 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within ISO
IEA		 MGI:1857856 (PMID:20040500)
GO_REF:0000107		 RGD
Ensembl		 PMID:20040500 GO_REF:0000107 NCBI chr10:69,233,377...69,287,360
Ensembl chr10:68,735,894...68,789,888 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17314325)		 UniProt
RGD		 PMID:17314325 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:17314325)		 UniProt
Ensembl
RGD		 PMID:17314325 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
G Wt1 WT1 transcription factor acts_upstream_of_or_within ISO MGI:1857268 (PMID:8395349) RGD PMID:8395349 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in IMP PMID:15843474 UniProt PMID:15843474 RGD:8554075 NCBI chr  X:71,390,328...71,395,023
Ensembl chr  X:67,350,373...67,355,162 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO
IEA		 (PMID:17537789)
GO_REF:0000107		 RGD
Ensembl		 PMID:17537789 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:3603818 (PMID:24550112) RGD PMID:24550112 NCBI chr19:34,179,316...34,196,278
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
negative regulation of metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:12141440)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:12141440 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
negative regulation of metanephric glomerular mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wt1 WT1 transcription factor involved_in ISS
ISO		 GO_REF:0000024
(PMID:10077614)		 UniProt
RGD		 PMID:10077614 GO_REF:0000024 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
negative regulation of metanephric mesenchymal cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing involved_in ISS
ISO		 GO_REF:0000024
(PMID:19460854)		 UniProt
RGD		 PMID:19460854 GO_REF:0000024 NCBI chr11:91,226,524...91,240,244
Ensembl chr11:77,721,912...77,735,564 		JBrowse link
negative regulation of metanephric S-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:12141440)		 UniProt
Ensembl
RGD		 PMID:12141440 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
pattern specification involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 involved_in ISO
IEA		 (PMID:15634693)
GO_REF:0000107		 RGD
Ensembl		 PMID:15634693 GO_REF:0000107 NCBI chr 2:31,436,802...31,439,222
Ensembl chr 2:29,702,558...29,704,978 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:18835385)		 UniProt
Ensembl
RGD		 PMID:18835385 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
positive regulation of glomerular metanephric mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr1 early growth response 1 involved_in IMP PMID:8910451 UniProt PMID:8910451 RGD:8553929 NCBI chr18:26,737,078...26,740,877
Ensembl chr18:26,462,981...26,466,766 		JBrowse link
positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor involved_in IEA
ISO		 GO_REF:0000107
(PMID:8657306)		 Ensembl
RGD		 PMID:8657306 GO_REF:0000107 NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:56,895,010...56,917,209 		JBrowse link
G Lif LIF, interleukin 6 family cytokine involved_in ISO (PMID:20624457) RGD PMID:20624457 NCBI chr14:83,354,602...83,364,053
Ensembl chr14:79,134,574...79,140,482 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
UniProtKB:Q00288 (PMID:12435636)		 UniProt
RGD		 PMID:12435636 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:12435636)		 UniProt
Ensembl
RGD		 PMID:12435636 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
positive regulation of metanephric cap mesenchymal cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISS
ISO		 GO_REF:0000024
(PMID:19161241)		 UniProt
RGD		 PMID:19161241 GO_REF:0000024 NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
positive regulation of metanephric DCT cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17314325)		 UniProt
RGD		 PMID:17314325 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:17314325)		 UniProt
Ensembl
RGD		 PMID:17314325 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
positive regulation of metanephric glomerulus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 involved_in ISO (PMID:18607644) RGD PMID:18607644 NCBI chr  X:116,914,320...116,918,504
Ensembl chr  X:112,120,228...112,124,057 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17047028)		 UniProt
RGD		 PMID:17047028 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Ret ret proto-oncogene involved_in ISO
IEA		 (PMID:17047028)
GO_REF:0000107		 RGD
Ensembl		 PMID:17047028 GO_REF:0000107 NCBI chr 4:152,998,344...153,040,556
Ensembl chr 4:151,326,431...151,368,176 		JBrowse link
positive regulation of metanephric mesenchymal cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor subunit B involved_in ISO
IDA
IEA		 (PMID:10734101)
PMID:19460854
GO_REF:0000107		 RGD
Ensembl		 PMID:10734101 PMID:19460854 GO_REF:0000107, RGD:8554838 NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:111,540,345...111,557,984 		JBrowse link
positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfa platelet derived growth factor subunit A involved_in ISS
ISO		 GO_REF:0000024
(PMID:19019919)		 UniProt
RGD		 PMID:19019919 GO_REF:0000024 NCBI chr12:20,759,366...20,780,337
Ensembl chr12:15,645,541...15,666,497 		JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19019919)		 UniProt
Ensembl
RGD		 PMID:19019919 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:111,540,345...111,557,984 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in ISS
ISO		 GO_REF:0000024
(PMID:19019919)		 UniProt
RGD		 PMID:19019919 GO_REF:0000024 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:54,499,964...54,538,843 		JBrowse link
positive regulation of metanephric podocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing involved_in ISS
ISO		 GO_REF:0000024
(PMID:18431508)		 UniProt
RGD		 PMID:18431508 GO_REF:0000024 NCBI chr11:91,226,524...91,240,244
Ensembl chr11:77,721,912...77,735,564 		JBrowse link
positive regulation of metanephric ureteric bud development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wt1 WT1 transcription factor involved_in ISS
ISO		 GO_REF:0000024
(PMID:8395349)		 UniProt
RGD		 PMID:8395349 GO_REF:0000024 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
proximal/distal pattern formation involved in metanephric nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irx1 iroquois homeobox 1 involved_in ISO
IEA		 (PMID:17875669)
GO_REF:0000107		 RGD
Ensembl		 PMID:17875669 GO_REF:0000107 NCBI chr 1:33,123,122...33,128,951
Ensembl chr 1:31,294,615...31,300,444 		JBrowse link
G Irx2 iroquois homeobox 2 involved_in ISO (PMID:17875669) RGD PMID:17875669 NCBI chr 1:32,489,512...32,494,930
Ensembl chr 1:30,660,960...30,666,378 		JBrowse link
regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437 (PMID:16054034) RGD PMID:16054034 NCBI chr10:89,135,362...89,157,065
Ensembl chr10:88,635,331...88,657,035 		JBrowse link
regulation of metanephric nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fat4 FAT atypical cadherin 4 acts_upstream_of_or_within ISO
IEA		 (PMID:23974041)
GO_REF:0000107		 RGD
Ensembl		 PMID:23974041 GO_REF:0000107 NCBI chr 2:123,855,289...123,984,716
Ensembl chr 2:121,927,942...122,056,707 		JBrowse link
G Lif LIF, interleukin 6 family cytokine involved_in ISO (PMID:20624457) RGD PMID:20624457 NCBI chr14:83,354,602...83,364,053
Ensembl chr14:79,134,574...79,140,482 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17314325)		 UniProt
RGD		 PMID:17314325 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:17314325)		 UniProt
Ensembl
RGD		 PMID:17314325 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 acts_upstream_of_or_within ISO
IEA		 MGI:103262 (PMID:23974041)
GO_REF:0000107		 RGD
Ensembl		 PMID:23974041 GO_REF:0000107 NCBI chr 2:143,801,181...143,916,941
Ensembl chr 2:141,648,108...141,766,968 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator acts_upstream_of_or_within ISO
IEA		 MGI:1917649 (PMID:23974041)
GO_REF:0000107		 RGD
Ensembl		 PMID:23974041 GO_REF:0000107 NCBI chr 8:13,380,551...13,451,640
Ensembl chr 8:5,095,722...5,167,010 		JBrowse link
regulation of metanephros size term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 involved_in ISO (PMID:18607644) RGD PMID:18607644 NCBI chr  X:116,914,320...116,918,504
Ensembl chr  X:112,120,228...112,124,057 		JBrowse link
G Pax2 paired box 2 involved_in ISO
ISS		 (PMID:17513325)
(PMID:17881463)
GO_REF:0000024		 RGD
UniProt		 PMID:17513325 PMID:17881463 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
ureteric bud invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmn1 formin 1 acts_upstream_of_or_within ISO (PMID:7517224) RGD PMID:7517224 NCBI chr 3:120,555,445...120,939,978
Ensembl chr 3:100,134,549...100,479,220 		JBrowse link
G Kif26b kinesin family member 26B acts_upstream_of_or_within ISO
IEA		 MGI:4459557 (PMID:20439720)
GO_REF:0000107		 RGD
Ensembl		 PMID:20439720 GO_REF:0000107 NCBI chr13:92,815,427...93,221,071
Ensembl chr13:90,283,404...90,682,811 		JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within
involved_in		 ISO MGI:2388379 (PMID:16839447)
(PMID:11688560), (PMID:16839447)		 RGD PMID:11688560 PMID:16839447 NCBI chr19:34,179,316...34,196,278
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      anatomical structure development 6646
        animal organ development 3708
          kidney development 408
            metanephros development 106
              cell differentiation involved in metanephros development + 22
              cell migration involved in metanephros development + 5
              cell proliferation involved in metanephros development + 10
              cell-cell signaling involved in metanephros development 0
              mesenchymal cell apoptotic process involved in metanephros development + 4
              metanephric capsule development + 1
              metanephric collecting duct development + 10
              metanephric cortex development 1
              metanephric epithelium development + 37
              metanephric juxtaglomerular apparatus development + 1
              metanephric mesenchyme development + 12
              metanephric nephron development + 42
              metanephric pyramids development 0
              metanephric smooth muscle tissue development 2
              metanephros morphogenesis + 31
              negative regulation of metanephros development + 1
              pattern specification involved in metanephros development + 4
              positive regulation of metanephros development + 3
              regulation of metanephric glomerulus development + 3
              regulation of metanephros development + 5
Path 2
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      anatomical structure development 6646
        multicellular organism development 5353
          system development 4635
            renal system development 422
              kidney development 408
                metanephros development 106
                  cell differentiation involved in metanephros development + 22
                  cell migration involved in metanephros development + 5
                  cell proliferation involved in metanephros development + 10
                  cell-cell signaling involved in metanephros development 0
                  mesenchymal cell apoptotic process involved in metanephros development + 4
                  metanephric capsule development + 1
                  metanephric collecting duct development + 10
                  metanephric cortex development 1
                  metanephric epithelium development + 37
                  metanephric juxtaglomerular apparatus development + 1
                  metanephric mesenchyme development + 12
                  metanephric nephron development + 42
                  metanephric pyramids development 0
                  metanephric smooth muscle tissue development 2
                  metanephros morphogenesis + 31
                  negative regulation of metanephros development + 1
                  pattern specification involved in metanephros development + 4
                  positive regulation of metanephros development + 3
                  regulation of metanephric glomerulus development + 3
                  regulation of metanephros development + 5
paths to the root