ONTOLOGY REPORT - ANNOTATIONS
Term: retinoid metabolic process
Accession: GO:0001523
browse the term
Definition: The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
Synonyms: exact_synonym: retinoid metabolism
xref: Reactome:R-HSA-2187335 "The retinoid cycle in cones (daylight vision)"; Reactome:R-HSA-2453902 "The canonical retinoid cycle in rods (twilight vision)"; Reactome:R-HSA-975634 "Retinoid metabolism and transport"
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Adh1c
alcohol dehydrogenase 1C (class I), gamma polypeptide
acts_upstream_of_or_within
ISO
MGI:2180100 (PMID:12027900)
RGD
PMID:12027900
NCBI chr 2:226,797,303...226,808,892
Ensembl chr 2:226,797,303...226,808,892
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Adh4
alcohol dehydrogenase 4 (class II), pi polypeptide
involved_in
ISO
(PMID:15369820)
RGD
PMID:15369820
NCBI chr 2:226,948,717...226,966,747
Ensembl chr 2:226,947,466...226,987,591
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Adh5
alcohol dehydrogenase 5 (class III), chi polypeptide
acts_upstream_of_or_within
ISO
MGI:2180101 (PMID:12027900)
RGD
PMID:12027900
NCBI chr 2:226,975,184...226,987,591
Ensembl chr 2:226,947,466...226,987,591
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Adh7
alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
involved_in
TAS ISO
(PMID:16787387), (PMID:9600267)
RGD
PMID:9600267 PMID:16787387 PMID:10829036
RGD:631904
NCBI chr 2:226,748,724...226,763,183
Ensembl chr 2:226,741,788...226,763,182
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Akr1b1
aldo-keto reductase family 1 member B1
involved_in
ISO ISS
(PMID:12732097) GO_REF:0000024
RGD UniProt
PMID:12732097
GO_REF:0000024
NCBI chr 4:63,899,222...63,913,315
Ensembl chr 4:62,932,031...62,946,157
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Akr1b10
aldo-keto reductase family 1 member B10
involved_in
ISO
(PMID:12732097)
RGD
PMID:12732097
NCBI chr 4:64,005,632...64,027,860
Ensembl chr 4:63,040,169...63,053,852
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Aldh1a1
aldehyde dehydrogenase 1 family, member A1
involved_in
IDA
PMID:7832787
UniProt
PMID:7832787
RGD:11558002
NCBI chr 1:227,426,939...227,579,497
Ensembl chr 1:218,042,127...218,152,961
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Bco1
beta-carotene oxygenase 1
involved_in
ISO IDA
(PMID:11401432) (PMID:11092891), (PMID:11418584) PMID:12468597
RGD
PMID:11092891 PMID:11401432 PMID:11418584 PMID:12468597
RGD:634627
NCBI chr19:62,058,061...62,094,923
Ensembl chr19:45,149,265...45,186,101
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Ces1d
carboxylesterase 1D
involved_in
TAS
PMID:12230550
UniProt
PMID:12230550
RGD:724430
NCBI chr19:13,873,490...13,912,035
Ensembl chr19:13,796,623...13,912,035
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Ces1dl1
carboxylesterase 1D like 1
involved_in
TAS
PMID:12230550
UniProt
PMID:12230550
RGD:724430
NCBI chr19:22,560,685...22,592,355
Ensembl chr19:22,560,770...22,592,351
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Ces1e
carboxylesterase 1E
involved_in
TAS
PMID:12230550
UniProt
PMID:12230550
RGD:724430
NCBI chr19:13,833,154...13,869,627
Ensembl chr19:13,796,623...13,912,035
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Ces1f
carboxylesterase 1F
involved_in
TAS
PMID:12230550
UniProt
PMID:12230550
RGD:724430
NCBI chr19:13,796,623...13,822,113
Ensembl chr19:13,796,623...13,912,035
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Ces2c
carboxylesterase 2C
involved_in
TAS
PMID:12230550
UniProt
PMID:12230550
RGD:724430
NCBI chr 1:260,391,190...260,398,757
Ensembl chr 1:260,388,902...260,398,790
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Ces2e
carboxylesterase 2E
involved_in
TAS
PMID:12230550
UniProt
PMID:12230550
RGD:724430
NCBI chr19:157,447...172,822
Ensembl chr19:157,407...172,856
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Clps
colipase
involved_in
ISO IEA
MGI:2660767 (PMID:11751900) GO_REF:0000107
RGD Ensembl
PMID:11751900
GO_REF:0000107
NCBI chr20:6,622,234...6,624,414
Ensembl chr20:6,620,529...6,622,689
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Cyp2j4
cytochrome P450, family 2, subfamily j, polypeptide 4
IDA
RGD
PMID:9606960
RGD:1625388
NCBI chr 5:116,295,691...116,323,219
Ensembl chr 5:111,178,703...111,244,794
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Dgat1
diacylglycerol O-acyltransferase 1
involved_in
ISO
MGI:1934012 (PMID:18348983)
RGD
PMID:18348983
NCBI chr 7:110,104,514...110,119,091
Ensembl chr 7:108,218,524...108,234,299
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Dhrs3
dehydrogenase/reductase 3
acts_upstream_of_or_within
ISO
MGI:5007106 (PMID:24005908)
RGD
PMID:24005908
NCBI chr 5:162,031,853...162,065,655
Ensembl chr 5:156,747,962...156,782,417
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Dhrs4
dehydrogenase/reductase 4
involved_in
ISO ISS
(PMID:12604222) GO_REF:0000024
RGD UniProt
PMID:12604222
GO_REF:0000024
NCBI chr15:32,924,482...32,948,103
Ensembl chr15:28,966,553...28,978,127
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Ldlr
low density lipoprotein receptor
involved_in
ISO IEA
MGI:1857212 (PMID:8798405) GO_REF:0000107
RGD Ensembl
PMID:8798405
GO_REF:0000107
NCBI chr 8:28,546,191...28,569,075
Ensembl chr 8:20,270,041...20,294,580
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Lipa
lipase A, lysosomal acid type
acts_upstream_of_or_within
ISO
MGI:2451080 (PMID:27354281)
RGD
PMID:27354281
NCBI chr 1:241,437,524...241,470,936
Ensembl chr 1:232,024,356...232,057,633
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Lpl
lipoprotein lipase
involved_in
ISO IEA
UniProtKB:P06858 (PMID:25589507) GO_REF:0000107
RGD Ensembl
PMID:25589507
GO_REF:0000107
NCBI chr16:25,596,205...25,621,928
Ensembl chr16:20,829,465...20,855,249
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Lrat
lecithin retinol acyltransferase
involved_in
ISO
MGI:2181412|MGI:3038935 (PMID:10487743), (PMID:16115871)
RGD
PMID:10487743 PMID:16115871
NCBI chr 2:170,562,148...170,571,212
Ensembl chr 2:168,266,877...168,273,619
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Pnlip
pancreatic lipase
involved_in
ISO
(PMID:10769148)
RGD
PMID:10769148
NCBI chr 1:257,774,012...257,811,656
Ensembl chr 1:257,798,581...257,811,654
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Pnpla2
patatin-like phospholipase domain containing 2
involved_in
ISO
MGI:3629035 (PMID:25732851)
RGD
PMID:25732851
NCBI chr 1:196,552,723...196,557,805
Ensembl chr 1:196,552,723...196,557,805
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Rarres2
retinoic acid receptor responder 2
involved_in
ISO
(PMID:9204961)
RGD
PMID:9204961
NCBI chr 4:78,853,450...78,856,652
Ensembl chr 4:77,522,535...77,525,556
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Rbp1
retinol binding protein 1
involved_in
ISO
MGI:2181412 (PMID:10487743)
RGD
PMID:10487743
NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743
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Rbp2
retinol binding protein 2
involved_in
ISO
MGI:2672086 (PMID:12138113), (PMID:35552670)
RGD
PMID:12138113 PMID:35552670
NCBI chr 8:99,079,293...99,104,489
Ensembl chr 8:99,079,104...99,104,473
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Rbp3
retinol binding protein 3
IC
RGD
PMID:8282025
RGD:6893658
NCBI chr16:9,273,787...9,282,255
Ensembl chr16:9,267,538...9,276,006
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Rbp4
retinol binding protein 4
involved_in
ISO
MGI:3629035 (PMID:25732851)
RGD
PMID:25732851
NCBI chr 1:245,306,349...245,313,551
Ensembl chr 1:235,893,917...235,901,399
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Rdh11
retinol dehydrogenase 11
involved_in
ISO
(PMID:12226107)
RGD
PMID:12226107
NCBI chr 6:103,712,373...103,728,247
Ensembl chr 6:97,979,378...97,995,252
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Rdh5
retinol dehydrogenase 5
involved_in
ISO
(PMID:9931293) (PMID:10588954)
RGD
PMID:9931293 PMID:10588954
NCBI chr 7:1,341,172...1,346,863
Ensembl chr 7:1,340,934...1,351,558
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Retsat
retinol saturase
involved_in
ISO
(PMID:15358783)
RGD
PMID:15358783
NCBI chr 4:106,211,459...106,220,222
Ensembl chr 4:104,653,155...104,668,310
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Rpe65
retinoid isomerohydrolase RPE65
involved_in
ISO
(PMID:25112876) (PMID:16150724)
RGD
PMID:16150724 PMID:25112876
NCBI chr 2:251,425,228...251,457,209
Ensembl chr 2:248,766,612...248,798,403
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Ttr
transthyretin
involved_in
ISO IEA
MGI:1857264 (PMID:11036082) GO_REF:0000107
RGD Ensembl
PMID:11036082
GO_REF:0000107
NCBI chr18:11,941,791...11,951,008
Ensembl chr18:11,943,789...11,951,008
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Aldh1a1
aldehyde dehydrogenase 1 family, member A1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:11876656)
Ensembl RGD
PMID:11876656
GO_REF:0000107
NCBI chr 1:227,426,939...227,579,497
Ensembl chr 1:218,042,127...218,152,961
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Aldh1a2
aldehyde dehydrogenase 1 family, member A2
acts_upstream_of_or_within
ISO
(PMID:11876656)
RGD
PMID:11876656
NCBI chr 8:80,758,641...80,837,891
Ensembl chr 8:71,877,850...71,957,107
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Aldh8a1
aldehyde dehydrogenase 8 family, member A1
acts_upstream_of_or_within
ISO
(PMID:11876656)
RGD
PMID:11876656
NCBI chr 1:16,183,940...16,203,385
Ensembl chr 1:16,183,940...16,203,385
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Cyp1a1
cytochrome P450, family 1, subfamily a, polypeptide 1
IDA
9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal
RGD
PMID:8765131
RGD:2306683
NCBI chr 8:66,991,940...66,998,014
Ensembl chr 8:58,096,077...58,102,125
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Dhrs9
dehydrogenase/reductase 9
involved_in
ISO ISS
(PMID:11304534) GO_REF:0000024
RGD UniProt
PMID:11304534
GO_REF:0000024
NCBI chr 3:74,553,357...74,579,535
Ensembl chr 3:54,147,803...54,220,241
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Rdh9
retinol dehydrogenase 9
acts_upstream_of_or_within
ISO
(PMID:11876656)
RGD
PMID:11876656
NCBI chr 7:63,642,305...63,645,149
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Aldh1a1
aldehyde dehydrogenase 1 family, member A1
IDA
RGD
PMID:17167544
RGD:2306320
NCBI chr 1:227,426,939...227,579,497
Ensembl chr 1:218,042,127...218,152,961
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Akr1c3
aldo-keto reductase family 1, member C3
involved_in
ISO
(PMID:21851338)
RGD
PMID:21851338
NCBI chr17:71,020,884...71,037,779
Ensembl chr17:66,110,963...66,127,873
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Prmt3
protein arginine methyltransferase 3
involved_in
ISO ISS IEA
(PMID:33495566) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:33495566
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:108,628,899...108,718,803
Ensembl chr 1:99,492,724...99,579,435
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Rdh10
retinol dehydrogenase 10
IMP
RGD
PMID:21138835
RGD:6771354
NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572
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Rdh16
retinol dehydrogenase 16
IMP
RGD
PMID:21138835
RGD:6771354
NCBI chr 7:65,499,763...65,510,304
Ensembl chr 7:63,597,536...63,624,124
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Dgat1
diacylglycerol O-acyltransferase 1
IMP
RGD
PMID:18000880
RGD:10400849
NCBI chr 7:110,104,514...110,119,091
Ensembl chr 7:108,218,524...108,234,299
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Isx
intestine-specific homeobox
acts_upstream_of_or_within
ISO
MGI:3775943 (PMID:18093975)
RGD
PMID:18093975
NCBI chr19:13,217,637...13,239,754
Ensembl chr19:13,218,552...13,239,760
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Abca4
ATP binding cassette subfamily A member 4
involved_in
ISO
(PMID:29847635), (PMID:33375396)
RGD
PMID:29847635 PMID:33375396
NCBI chr 2:212,849,470...212,986,730
Ensembl chr 2:210,164,813...210,302,069
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Akr1b10
aldo-keto reductase family 1 member B10
IDA
RGD
PMID:20709016
RGD:6903952
NCBI chr 4:64,005,632...64,027,860
Ensembl chr 4:63,040,169...63,053,852
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Akr1c1
aldo-keto reductase family 1, member C1
involved_in
ISO
(PMID:21851338)
RGD
PMID:21851338
NCBI chr17:70,720,397...70,747,285
Ensembl chr17:65,810,475...65,837,326
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Akr1c3
aldo-keto reductase family 1, member C3
involved_in
ISO
(PMID:21851338)
RGD
PMID:21851338
NCBI chr17:71,020,884...71,037,779
Ensembl chr17:66,110,963...66,127,873
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Aldh1a2
aldehyde dehydrogenase 1 family, member A2
acts_upstream_of_or_within
ISO
(PMID:12610736)
RGD
PMID:12610736
NCBI chr 8:80,758,641...80,837,891
Ensembl chr 8:71,877,850...71,957,107
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Aldh1a3
aldehyde dehydrogenase 1 family, member A3
involved_in
IEA ISO
GO_REF:0000107 (PMID:11585737)
Ensembl RGD
PMID:11585737
GO_REF:0000107
NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436
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Aldh8a1
aldehyde dehydrogenase 8 family, member A1
involved_in
ISO
(PMID:11007799)
RGD
PMID:11007799
NCBI chr 1:16,183,940...16,203,385
Ensembl chr 1:16,183,940...16,203,385
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Bco1
beta-carotene oxygenase 1
involved_in acts_upstream_of_or_within
ISO IBA IEA ISS
(PMID:11401432), (PMID:17951468), (PMID:24668807) (PMID:15951442) MGI:2177469 (PMID:25701869) GO_REF:0000033 GO_REF:0000107 GO_REF:0000024
RGD GO_Central Ensembl UniProt
PMID:11401432 PMID:15951442 PMID:17951468 PMID:24668807 PMID:25701869
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr19:62,058,061...62,094,923
Ensembl chr19:45,149,265...45,186,101
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Bco2
beta-carotene oxygenase 2
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:1926923 (PMID:25701869)
GO_Central RGD
PMID:25701869
GO_REF:0000033
NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467
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Cyp1b1
cytochrome P450, family 1, subfamily b, polypeptide 1
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:15258110) GO_REF:0000024
Ensembl RGD UniProt
PMID:15258110
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:21,093,927...21,103,091
Ensembl chr 6:15,342,344...15,350,917
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Dhrs4
dehydrogenase/reductase 4
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:12680773)
GO_Central RGD
PMID:12680773
GO_REF:0000033
NCBI chr15:32,924,482...32,948,103
Ensembl chr15:28,966,553...28,978,127
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Rbp4
retinol binding protein 4
acts_upstream_of_or_within
ISO
MGI:2445721 (PMID:11562477)
RGD
PMID:11562477
NCBI chr 1:245,306,349...245,313,551
Ensembl chr 1:235,893,917...235,901,399
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Rdh10
retinol dehydrogenase 10
involved_in
ISO
(PMID:19458327)
RGD
PMID:19458327
NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572
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Rdh11
retinol dehydrogenase 11
acts_upstream_of_or_within
ISO
(PMID:12807874)
RGD
PMID:12807874
NCBI chr 6:103,712,373...103,728,247
Ensembl chr 6:97,979,378...97,995,252
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Rdh13
retinol dehydrogenase 13
involved_in
ISO IBA
(PMID:18039331) GO_REF:0000033
RGD GO_Central
PMID:18039331
GO_REF:0000033
NCBI chr 1:69,373,014...69,401,454
Ensembl chr 1:69,373,113...69,400,908
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Rpe65
retinoid isomerohydrolase RPE65
involved_in
IMP IBA
GO_REF:0000033
GO_Central RGD
PMID:21785167
GO_REF:0000033, RGD:6893661
NCBI chr 2:251,425,228...251,457,209
Ensembl chr 2:248,766,612...248,798,403
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Rps13
ribosomal protein S13
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:170,572,925...170,575,355
Ensembl chr 1:170,572,921...170,575,355 Ensembl chr 3:170,572,921...170,575,355
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Rps13l1
ribosomal protein S13 like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:56,457,121...56,457,669
Ensembl chr 5:56,457,124...56,457,669
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Sdr16c5
short chain dehydrogenase/reductase family 16C, member 5
involved_in
ISO IBA
(PMID:18926804), (PMID:19102727) GO_REF:0000033
RGD GO_Central
PMID:18926804 PMID:19102727
GO_REF:0000033
NCBI chr 5:17,018,813...17,043,974
Ensembl chr 5:17,018,813...17,040,970
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Aldh1a1
aldehyde dehydrogenase 1 family, member A1
IMP
RGD
PMID:21138835
RGD:6771354
NCBI chr 1:227,426,939...227,579,497
Ensembl chr 1:218,042,127...218,152,961
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Aldh1a2
aldehyde dehydrogenase 1 family, member A2
involved_in
IEP ISO ISS IMP
(PMID:29240402), (PMID:33565183) GO_REF:0000024
RGD UniProt
PMID:29240402 PMID:33565183 PMID:15950969 PMID:21138835
GO_REF:0000024, RGD:6771322 , RGD:6771354
NCBI chr 8:80,758,641...80,837,891
Ensembl chr 8:71,877,850...71,957,107
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Aldh1a3
aldehyde dehydrogenase 1 family, member A3
involved_in acts_upstream_of_or_within
IEP ISO ISS IEA IMP
(PMID:14623956) (PMID:11013254), (PMID:11044606), (PMID:16241904) (PMID:27759097) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:11013254 PMID:11044606 PMID:14623956 PMID:16241904 PMID:27759097 PMID:15950969 PMID:21138835 More...
GO_REF:0000024 GO_REF:0000107, RGD:6771322 , RGD:6771354
NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436
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Crabp2
cellular retinoic acid binding protein 2
IEP
RGD
PMID:15950969
RGD:6771322
NCBI chr 2:175,714,862...175,719,208
Ensembl chr 2:173,416,857...173,421,379
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Dhrs9
dehydrogenase/reductase 9
IEP IDA
RGD
PMID:15950969 PMID:21138835
RGD:6771322 , RGD:6771354
NCBI chr 3:74,553,357...74,579,535
Ensembl chr 3:54,147,803...54,220,241
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Rbp1
retinol binding protein 1
IEP
RGD
PMID:15950969
RGD:6771322
NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743
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Rdh10
retinol dehydrogenase 10
acts_upstream_of_or_within
ISO
(PMID:17473173)
RGD
PMID:17473173
NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572
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Cyp26a1
cytochrome P450, family 26, subfamily a, polypeptide 1
involved_in
ISO IBA
(PMID:10823918) GO_REF:0000033 (PMID:9250660)
RGD GO_Central
PMID:9250660 PMID:10823918
GO_REF:0000033
NCBI chr 1:244,883,822...244,887,657
Ensembl chr 1:235,471,298...235,475,204
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Cyp26b1
cytochrome P450, family 26, subfamily b, polypeptide 1
involved_in
IMP IBA IEA ISO
GO_REF:0000033 GO_REF:0000117 (PMID:10823918)
GO_Central UniProt RGD
PMID:10823918 PMID:21138835
GO_REF:0000033 GO_REF:0000117, RGD:6771354
NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628
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Cyp26c1
cytochrome P450, family 26, subfamily C, polypeptide 1
involved_in
ISO IBA
(PMID:14532297) GO_REF:0000033
RGD GO_Central
PMID:14532297
GO_REF:0000033
NCBI chr 1:235,458,961...235,468,433
Ensembl chr 1:235,459,356...235,466,842
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Cyp2w1
cytochrome P450, family 2, subfamily w, polypeptide 1
involved_in
ISO
(PMID:26936974)
RGD
PMID:26936974
NCBI chr12:15,291,552...15,296,421
Ensembl chr12:15,291,704...15,296,421
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Adh1-ps1
alcohol dehydrogenase 1C (class I), gamma polypeptide, pseudogene 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:226,862,836...226,881,171
Ensembl chr 2:226,862,725...226,881,162
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Adh1c
alcohol dehydrogenase 1C (class I), gamma polypeptide
involved_in acts_upstream_of_or_within
IBA ISO IEA
GO_REF:0000033 MGI:2180099|MGI:2180100|MGI:97876 (PMID:10358022), (PMID:12851412), (PMID:15193143) GO_REF:0000107
GO_Central RGD Ensembl
PMID:10358022 PMID:12851412 PMID:15193143
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:226,797,303...226,808,892
Ensembl chr 2:226,797,303...226,808,892
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Adh6
alcohol dehydrogenase 6 (class V)
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000107
GO_Central Ensembl
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:226,903,208...226,934,564
Ensembl chr 2:226,903,250...226,934,534
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Adh6a
alcohol dehydrogenase 6A (class V)
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:226,823,775...226,846,005
Ensembl chr 2:226,823,730...226,846,003
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Adh7
alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 MGI:2180102 (PMID:10358022), (PMID:10402668) GO_REF:0000033
Ensembl RGD GO_Central
PMID:10358022 PMID:10402668
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:226,748,724...226,763,183
Ensembl chr 2:226,741,788...226,763,182
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Aldh1a1
aldehyde dehydrogenase 1 family, member A1
acts_upstream_of_or_within
ISO
MGI:1861722|MGI:2667220|MGI:3609477 (PMID:10191271), (PMID:12808103), (PMID:12851412), (PMID:16207763)
RGD
PMID:10191271 PMID:12808103 PMID:12851412 PMID:16207763
NCBI chr 1:227,426,939...227,579,497
Ensembl chr 1:218,042,127...218,152,961
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Aldh1a2
aldehyde dehydrogenase 1 family, member A2
acts_upstream_of_or_within involved_in
TAS ISO IDA
MGI:1857891|MGI:2180721 (PMID:14623241), (PMID:16368932), (PMID:8797830) (PMID:33565183)
RGD
PMID:8797830 PMID:14623241 PMID:16368932 PMID:33565183 PMID:15205379 PMID:12547725 More...
RGD:1576366 , RGD:1576367
NCBI chr 8:80,758,641...80,837,891
Ensembl chr 8:71,877,850...71,957,107
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Aldh1a3
aldehyde dehydrogenase 1 family, member A3
involved_in acts_upstream_of_or_within
ISO
(PMID:11585737) MGI:1353450|MGI:3043947|MGI:3512079 (PMID:16207763), (PMID:17207476)
RGD
PMID:11585737 PMID:16207763 PMID:17207476
NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436
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Aldh8a1
aldehyde dehydrogenase 8 family, member A1
involved_in
ISO IBA
(PMID:11007799) GO_REF:0000033
RGD GO_Central
PMID:11007799
GO_REF:0000033
NCBI chr 1:16,183,940...16,203,385
Ensembl chr 1:16,183,940...16,203,385
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Crabp2
cellular retinoic acid binding protein 2
acts_upstream_of_or_within involved_in
NAS ISO IEA
(PMID:9826179) GO_REF:0000107
RGD Ensembl
PMID:9826179 PMID:7750498
GO_REF:0000107, RGD:61557
NCBI chr 2:175,714,862...175,719,208
Ensembl chr 2:173,416,857...173,421,379
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Cyp26a1
cytochrome P450, family 26, subfamily a, polypeptide 1
involved_in acts_upstream_of_or_within
ISO
(PMID:22020119), (PMID:9716180) (PMID:9250660), (PMID:9442090) MGI:2183292 (PMID:15531370)
RGD
PMID:9250660 PMID:9442090 PMID:9716180 PMID:15531370 PMID:22020119
NCBI chr 1:244,883,822...244,887,657
Ensembl chr 1:235,471,298...235,475,204
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Cyp26b1
cytochrome P450, family 26, subfamily b, polypeptide 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:22020119)
UniProt RGD
PMID:22020119
GO_REF:0000024
NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628
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Cyp2c11
cytochrome P450, subfamily 2, polypeptide 11
involved_in
ISO
(PMID:11093772)
RGD
PMID:11093772
NCBI chr 1:246,175,216...246,211,445
Ensembl chr 1:236,762,842...236,799,066
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Cyp2c79
cytochrome P450, family 2, subfamily c, polypeptide 79
involved_in
ISO
(PMID:11093772)
RGD
PMID:11093772
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Cyp2s1
cytochrome P450, family 2, subfamily s, polypeptide 1
involved_in
ISO
(PMID:12711469)
RGD
PMID:12711469
NCBI chr 1:81,309,948...81,325,303
Ensembl chr 1:81,310,451...81,325,303
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Cyp3a2
cytochrome P450, family 3, subfamily a, polypeptide 2
involved_in
ISO
(PMID:11093772)
RGD
PMID:11093772
NCBI chr12:14,321,771...14,343,886
Ensembl chr12:9,015,383...9,285,008
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Cyp3a9
cytochrome P450, family 3, subfamily a, polypeptide 9
involved_in
ISO
(PMID:11093772)
RGD
PMID:11093772
NCBI chr12:21,919,955...21,960,160
Ensembl chr12:16,806,207...16,846,422
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Dhrs9
dehydrogenase/reductase 9
NAS
RGD
PMID:12390888
RGD:633755
NCBI chr 3:74,553,357...74,579,535
Ensembl chr 3:54,147,803...54,220,241
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Rbp1
retinol binding protein 1
acts_upstream_of_or_within
ISO
MGI:2181412|MGI:87921 (PMID:15193143)
RGD
PMID:15193143
NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743
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Rdh16
retinol dehydrogenase 16
IDA
RGD
PMID:7499345
RGD:1299624
NCBI chr 7:65,499,763...65,510,304
Ensembl chr 7:63,597,536...63,624,124
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Scpep1
serine carboxypeptidase 1
IEP
RGD
PMID:11447226
RGD:70518
NCBI chr10:74,200,491...74,230,107
Ensembl chr10:73,703,278...73,732,850
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Adh1-ps1
alcohol dehydrogenase 1C (class I), gamma polypeptide, pseudogene 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:226,862,836...226,881,171
Ensembl chr 2:226,862,725...226,881,162
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Adh1c
alcohol dehydrogenase 1C (class I), gamma polypeptide
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 MGI:2180099|MGI:2180100|MGI:97876 (PMID:10358022), (PMID:12851412), (PMID:15193143)
GO_Central Ensembl RGD
PMID:10358022 PMID:12851412 PMID:15193143
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:226,797,303...226,808,892
Ensembl chr 2:226,797,303...226,808,892
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Adh4
alcohol dehydrogenase 4 (class II), pi polypeptide
involved_in
ISO ISS
(PMID:16787387), (PMID:17279314) GO_REF:0000024
RGD UniProt
PMID:16787387 PMID:17279314
GO_REF:0000024
NCBI chr 2:226,948,717...226,966,747
Ensembl chr 2:226,947,466...226,987,591
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Adh6
alcohol dehydrogenase 6 (class V)
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000107
GO_Central Ensembl
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:226,903,208...226,934,564
Ensembl chr 2:226,903,250...226,934,534
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Adh6a
alcohol dehydrogenase 6A (class V)
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:226,823,775...226,846,005
Ensembl chr 2:226,823,730...226,846,003
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Adh7
alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
acts_upstream_of_or_within involved_in
IDA ISO IBA IEA
MGI:2180102 (PMID:10358022), (PMID:10402668) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:10358022 PMID:10402668 PMID:10829036
GO_REF:0000033 GO_REF:0000107, RGD:631904
NCBI chr 2:226,748,724...226,763,183
Ensembl chr 2:226,741,788...226,763,182
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Akr1b1
aldo-keto reductase family 1 member B1
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr 4:63,899,222...63,913,315
Ensembl chr 4:62,932,031...62,946,157
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Akr1b10
aldo-keto reductase family 1 member B10
IDA
RGD
PMID:20709016
RGD:6903952
NCBI chr 4:64,005,632...64,027,860
Ensembl chr 4:63,040,169...63,053,852
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Aldh1a1
aldehyde dehydrogenase 1 family, member A1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000041 MGI:2667220 (PMID:12851412) GO_REF:0000107
UniProt RGD Ensembl
PMID:12851412
GO_REF:0000041 GO_REF:0000107
NCBI chr 1:227,426,939...227,579,497
Ensembl chr 1:218,042,127...218,152,961
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Aldh1a2
aldehyde dehydrogenase 1 family, member A2
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr 8:80,758,641...80,837,891
Ensembl chr 8:71,877,850...71,957,107
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Aldh1a3
aldehyde dehydrogenase 1 family, member A3
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436
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Awat2
acyl-CoA wax alcohol acyltransferase 2
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr X:65,481,676...65,490,562
Ensembl chr X:65,481,929...65,527,625
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Bco1
beta-carotene oxygenase 1
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr19:62,058,061...62,094,923
Ensembl chr19:45,149,265...45,186,101
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Cel
carboxyl ester lipase
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr 3:32,281,518...32,289,019
Ensembl chr 3:11,883,532...11,891,035
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Ces1d
carboxylesterase 1D
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr19:13,873,490...13,912,035
Ensembl chr19:13,796,623...13,912,035
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Ces1dl1
carboxylesterase 1D like 1
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr19:22,560,685...22,592,355
Ensembl chr19:22,560,770...22,592,351
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Ces1e
carboxylesterase 1E
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr19:13,833,154...13,869,627
Ensembl chr19:13,796,623...13,912,035
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Ces1f
carboxylesterase 1F
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr19:13,796,623...13,822,113
Ensembl chr19:13,796,623...13,912,035
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Ces2a
carboxylesterase 2A
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr19:129,428...136,480
Ensembl chr19:129,428...136,480
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Ces2c
carboxylesterase 2C
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr 1:260,391,190...260,398,757
Ensembl chr 1:260,388,902...260,398,790
G
Ces2e
carboxylesterase 2E
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr19:157,447...172,822
Ensembl chr19:157,407...172,856
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Cyp1a1
cytochrome P450, family 1, subfamily a, polypeptide 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000041 (PMID:10681376)
UniProt RGD
PMID:10681376
GO_REF:0000024 GO_REF:0000041
NCBI chr 8:66,991,940...66,998,014
Ensembl chr 8:58,096,077...58,102,125
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Cyp1a2
cytochrome P450, family 1, subfamily a, polypeptide 2
involved_in
IEA ISS ISO
GO_REF:0000041 GO_REF:0000024 (PMID:10681376)
UniProt RGD
PMID:10681376
GO_REF:0000024 GO_REF:0000041
NCBI chr 8:66,971,261...66,978,149
Ensembl chr 8:58,075,367...58,082,312
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Cyp1b1
cytochrome P450, family 1, subfamily b, polypeptide 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:15258110) GO_REF:0000041 (PMID:10681376), (PMID:15258110) GO_REF:0000107
UniProt RGD Ensembl
PMID:10681376 PMID:15258110
GO_REF:0000024 GO_REF:0000041 GO_REF:0000107
NCBI chr 6:21,093,927...21,103,091
Ensembl chr 6:15,342,344...15,350,917
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Cyp2d4
cytochrome P450, family 2, subfamily d, polypeptide 4
involved_in
ISO
(PMID:10681376)
RGD
PMID:10681376
NCBI chr 7:115,762,662...115,771,832
Ensembl chr 7:113,881,618...113,891,759
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Cyp2j4
cytochrome P450, family 2, subfamily j, polypeptide 4
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr 5:116,295,691...116,323,219
Ensembl chr 5:111,178,703...111,244,794
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Cyp3a2
cytochrome P450, family 3, subfamily a, polypeptide 2
involved_in
ISO
(PMID:10681376)
RGD
PMID:10681376
NCBI chr12:14,321,771...14,343,886
Ensembl chr12:9,015,383...9,285,008
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Dgat1
diacylglycerol O-acyltransferase 1
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr 7:110,104,514...110,119,091
Ensembl chr 7:108,218,524...108,234,299
G
Dgat2
diacylglycerol O-acyltransferase 2
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr 1:162,866,237...162,896,655
Ensembl chr 1:153,454,080...153,484,428
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Dhrs3
dehydrogenase/reductase 3
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr 5:162,031,853...162,065,655
Ensembl chr 5:156,747,962...156,782,417
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Dhrs4
dehydrogenase/reductase 4
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr15:32,924,482...32,948,103
Ensembl chr15:28,966,553...28,978,127
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Dhrs7
dehydrogenase/reductase 7
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr 6:91,332,259...91,347,856
Ensembl chr 6:91,251,323...91,347,892
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Hsd17b6
hydroxysteroid (17-beta) dehydrogenase 6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:422,466...442,008
Ensembl chr 7:422,480...442,425
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Lipe
lipase E, hormone sensitive type
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr 1:90,093,433...90,112,117
Ensembl chr 1:80,965,627...80,984,310
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Lrat
lecithin retinol acyltransferase
involved_in acts_upstream_of_or_within
IDA ISO IBA IEA
(PMID:28758396) MGI:3038935|MGI:97879 (PMID:18093970) GO_REF:0000033 (PMID:10819989) GO_REF:0000041
RGD GO_Central UniProt
PMID:10819989 PMID:18093970 PMID:28758396 PMID:2253789 PMID:14642897 PMID:9244401 PMID:8460936 More...
GO_REF:0000033 GO_REF:0000041, RGD:1599829 , RGD:6484737 , RGD:1599832 , RGD:1599831
NCBI chr 2:170,562,148...170,571,212
Ensembl chr 2:168,266,877...168,273,619
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Plb1
phospholipase B1
IDA
RGD
PMID:8117729
RGD:6903951
NCBI chr 6:29,807,127...29,945,607
Ensembl chr 6:24,089,214...24,210,117
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Pnlip
pancreatic lipase
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr 1:257,774,012...257,811,656
Ensembl chr 1:257,798,581...257,811,654
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Pnpla2
patatin-like phospholipase domain containing 2
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr 1:196,552,723...196,557,805
Ensembl chr 1:196,552,723...196,557,805
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Pnpla4
patatin like phospholipase domain containing 4
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr X:46,200,351...46,205,517
Ensembl chr X:42,305,373...42,318,552
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Rbp1
retinol binding protein 1
acts_upstream_of_or_within
IDA ISO
MGI:2181412|MGI:87921 (PMID:15193143), (PMID:15765518)
RGD
PMID:15193143 PMID:15765518 PMID:14642897
RGD:6484737
NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743
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Rbp2
retinol binding protein 2
TAS
RGD
PMID:3029082
RGD:729693
NCBI chr 8:99,079,293...99,104,489
Ensembl chr 8:99,079,104...99,104,473
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Rbp4
retinol binding protein 4
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:10232633) MGI:1891259 (PMID:18093970) GO_REF:0000107
RGD Ensembl
PMID:10232633 PMID:18093970
GO_REF:0000107
NCBI chr 1:245,306,349...245,313,551
Ensembl chr 1:235,893,917...235,901,399
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Rdh10
retinol dehydrogenase 10
involved_in
ISO IEA
(PMID:19458327) GO_REF:0000041
RGD UniProt
PMID:19458327
GO_REF:0000041
NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572
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Rdh11
retinol dehydrogenase 11
involved_in
ISO
(PMID:29567832)
RGD
PMID:29567832
NCBI chr 6:103,712,373...103,728,247
Ensembl chr 6:97,979,378...97,995,252
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Rdh12
retinol dehydrogenase 12
involved_in
ISO
(PMID:12226107) (PMID:22621924)
RGD
PMID:12226107 PMID:22621924
NCBI chr 6:103,748,457...103,761,379
Ensembl chr 6:98,015,465...98,028,388
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Rdh13
retinol dehydrogenase 13
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr 1:69,373,014...69,401,454
Ensembl chr 1:69,373,113...69,400,908
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Rdh14
retinol dehydrogenase 14
acts_upstream_of_or_within involved_in
ISO
(PMID:25533474) (PMID:12226107)
RGD
PMID:12226107 PMID:25533474
NCBI chr 6:33,156,569...33,161,712
Ensembl chr 6:33,156,569...33,161,712
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Rdh16
retinol dehydrogenase 16
involved_in
IDA IBA IEA
GO_REF:0000033 GO_REF:0000041
GO_Central UniProt RGD
PMID:7499345
GO_REF:0000033 GO_REF:0000041, RGD:1299624
NCBI chr 7:65,499,763...65,510,304
Ensembl chr 7:63,597,536...63,624,124
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Rdh7
retinol dehydrogenase 7
involved_in
IEA IBA
GO_REF:0000041 GO_REF:0000033
UniProt GO_Central
GO_REF:0000033 GO_REF:0000041
NCBI chr 7:63,676,016...63,689,375
Ensembl chr 7:63,675,579...63,689,392
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Rdh8
retinol dehydrogenase 8
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:15755727)
GO_Central RGD
PMID:15755727
GO_REF:0000033
NCBI chr 8:27,629,380...27,636,651
Ensembl chr 8:19,353,191...19,360,462
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Retsat
retinol saturase
involved_in
ISS IBA ISO IEA
PMID:15358783 GO_REF:0000033 (PMID:15358783) GO_REF:0000107
GO_Central RGD Ensembl
PMID:15358783 PMID:15358783
GO_REF:0000033 GO_REF:0000107, RGD:8553455
NCBI chr 4:106,211,459...106,220,222
Ensembl chr 4:104,653,155...104,668,310
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Rpe65
retinoid isomerohydrolase RPE65
IDA
RGD
PMID:3603006
RGD:9585656
NCBI chr 2:251,425,228...251,457,209
Ensembl chr 2:248,766,612...248,798,403
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Sdr16c5
short chain dehydrogenase/reductase family 16C, member 5
involved_in
ISO IBA
(PMID:18926804), (PMID:19102727) GO_REF:0000033
RGD GO_Central
PMID:18926804 PMID:19102727
GO_REF:0000033
NCBI chr 5:17,018,813...17,043,974
Ensembl chr 5:17,018,813...17,040,970
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Sdr9c7
short chain dehydrogenase/reductase family 9C, member 7
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:63,703,788...63,720,325
Ensembl chr 7:63,707,071...63,721,480
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Lipa
lipase A, lysosomal acid type
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2451080 (PMID:27354281)
Ensembl RGD
PMID:27354281
GO_REF:0000107
NCBI chr 1:241,437,524...241,470,936
Ensembl chr 1:232,024,356...232,057,633
G
Lrat
lecithin retinol acyltransferase
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:28758396) (PMID:11108736)
GO_Central RGD
PMID:11108736 PMID:28758396
GO_REF:0000033
NCBI chr 2:170,562,148...170,571,212
Ensembl chr 2:168,266,877...168,273,619
G
Rbp1
retinol binding protein 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:15632377)
UniProt RGD
PMID:15632377
GO_REF:0000024
NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all