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ONTOLOGY REPORT - ANNOTATIONS


Term:skeletal system development
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Accession:GO:0001501 term browser browse the term
Definition:The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton).
Synonyms:exact_synonym: skeletal development



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skeletal system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07021591.1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024
G Acan aggrecan involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:142,390,951...142,453,779 JBrowse link
G Acd ACD, shelterin complex subunit and telomerase recruitment factor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856658 (PMID:15537664)
Ensembl
RGD
PMID:15537664 GO_REF:0000107 NCBI chr19:33,586,739...33,589,481 JBrowse link
G Acp2 acid phosphatase 2, lysosomal acts_upstream_of_or_within ISO MGI:2180084 (PMID:9228031) RGD PMID:9228031 NCBI chr 3:77,175,022...77,185,180 JBrowse link
G Acvr2b activin A receptor type 2B acts_upstream_of_or_within ISO MGI:1857709|MGI:98728 (PMID:16845371) RGD PMID:16845371 NCBI chr 8:128,016,589...128,056,193 JBrowse link
G Alx1 ALX homeobox 1 TAS RGD PMID:12929931 RGD:1358475 NCBI chr 7:38,157,626...38,177,220 JBrowse link
G Ash1l ASH1 like histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:3852878 (PMID:26333994) RGD PMID:26333994 NCBI chr 2:174,346,267...174,483,057 JBrowse link
G B3glct beta 3-glucosyltransferase acts_upstream_of_or_within ISO (PMID:31600785) RGD PMID:31600785 NCBI chr12:5,255,521...5,346,807 JBrowse link
G Bcan brevican involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:173,454,479...173,467,717 JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO MGI:1857632 (PMID:7926765) RGD PMID:7926765 NCBI chr17:81,332,175...81,341,625 JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO MGI:2654594|MGI:3041440 (PMID:14654219), (PMID:15936012) RGD PMID:14654219 PMID:15936012 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Bmp5 bone morphogenetic protein 5 acts_upstream_of_or_within ISO MGI:1857400|MGI:1858106|MGI:2153906|MGI:2153907 (PMID:1339316) RGD PMID:1339316 NCBI chr 8:76,517,164...76,639,925 JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:3810994 (PMID:18695242)
GO_Central
RGD
PMID:18695242 GO_REF:0000033 NCBI chr 5:17,775,684...17,802,570 JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in ISO (PMID:30735131) RGD PMID:30735131 NCBI chr 1:205,731,828...205,743,430 JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856326 (PMID:6501560)
Ensembl
RGD
PMID:6501560 GO_REF:0000107 NCBI chr13:47,493,949...47,564,194 JBrowse link
G Cdkn1c cyclin-dependent kinase inhibitor 1C acts_upstream_of_or_within ISO MGI:1933758|MGI:3840687 (PMID:19276117) RGD PMID:19276117 NCBI chr 1:208,084,801...208,087,680 JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in ISO (PMID:16155193) RGD PMID:16155193 NCBI chr 5:21,812,007...21,995,358 JBrowse link
G Chrd chordin acts_upstream_of_or_within ISO MGI:2157350 (PMID:11784076) RGD PMID:11784076 NCBI chr11:80,171,994...80,181,166 JBrowse link
G Clec3b C-type lectin domain family 3, member B acts_upstream_of_or_within ISO MGI:2178555 (PMID:11604516) RGD PMID:11604516 NCBI chr 8:122,810,120...122,815,837 JBrowse link
G Col11a2 collagen type XI alpha 2 chain involved_in ISO (PMID:10677296) RGD PMID:10677296 NCBI chr20:4,786,932...4,816,598 JBrowse link
G Col12a1 collagen type XII alpha 1 chain involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:80,547,592...80,665,665 JBrowse link
G Col13a1 collagen type XIII alpha 1 chain involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:29,783,965...29,924,116 JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:11,474,104...11,582,593 JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:14976317), (PMID:1874719)
GO_REF:0000033
(PMID:8163675)
(PMID:8097422)
RGD
GO_Central
PMID:1874719 PMID:8097422 PMID:8163675 PMID:14976317 GO_REF:0000033 NCBI chr10:80,380,458...80,397,461 JBrowse link
G Col1a2 collagen type I alpha 2 chain involved_in ISO
IEA
(PMID:17955022), (PMID:18375391), (PMID:8841196)
GO_REF:0000107
RGD
Ensembl
PMID:8841196 PMID:17955022 PMID:18375391 GO_REF:0000107 NCBI chr 4:33,518,557...33,553,484 JBrowse link
G Col27a1 collagen type XXVII alpha 1 chain involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:76,647,302...76,765,989 JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in ISO (PMID:1429602) RGD PMID:1429602 NCBI chr 7:130,977,561...131,006,627 JBrowse link
G Col3a1 collagen type III alpha 1 chain IEP RGD PMID:10373016 RGD:704391 NCBI chr 9:54,866,646...54,902,578 JBrowse link
G Col5a2 collagen type V alpha 2 chain acts_upstream_of_or_within ISO MGI:2152946 (PMID:7704020) RGD PMID:7704020 NCBI chr 9:54,940,768...55,090,151 JBrowse link
G Col9a1 collagen type IX alpha 1 chain acts_upstream_of_or_within ISO MGI:88469 (PMID:18191556) RGD PMID:18191556 NCBI chr 9:26,585,034...26,668,222 JBrowse link
G Comp cartilage oligomeric matrix protein acts_upstream_of_or_within ISO MGI:88465 (PMID:18191556) RGD PMID:18191556 NCBI chr16:19,047,206...19,055,584 JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO MGI:2148591|MGI:2148594|MGI:2450929 (PMID:15866163) RGD PMID:15866163 NCBI chr 8:129,517,576...129,544,661 JBrowse link
G Dll3 delta like canonical Notch ligand 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:11923214)
(PMID:10742114)
Ensembl
RGD
PMID:10742114 PMID:11923214 PMID:11923214 GO_REF:0000107, RGD:8554121 NCBI chr 1:83,562,011...83,570,008 JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within ISO MGI:1857637 (PMID:8152482) RGD PMID:8152482 NCBI chr17:22,660,799...22,666,687 JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 acts_upstream_of_or_within ISO MGI:2183829 (PMID:11997520) RGD PMID:11997520 NCBI chr 4:104,363,838...104,425,271 JBrowse link
G Epha2 Eph receptor A2 acts_upstream_of_or_within ISO MGI:2448472 (PMID:11287184) RGD PMID:11287184 NCBI chr 5:158,888,629...158,917,100 JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 acts_upstream_of_or_within ISO (PMID:17987665) RGD PMID:17987665 NCBI chr 5:166,606,841...166,620,124 JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase acts_upstream_of_or_within ISO MGI:2656539|MGI:5428020|MGI:5432377 (PMID:22615579), (PMID:22732358) RGD PMID:22615579 PMID:22732358 NCBI chr12:20,940,654...20,999,072 JBrowse link
G Fbn1 fibrillin 1 involved_in ISO (PMID:8188302) RGD PMID:8188302 NCBI chr 3:112,554,257...112,750,835 JBrowse link
G Fgfrl1 fibroblast growth factor receptor-like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3849002 (PMID:19383940)
Ensembl
RGD
PMID:19383940 GO_REF:0000107 NCBI chr14:1,154,275...1,166,334 JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO MGI:1856705|MGI:1857869 (PMID:10072431), (PMID:4784576), (PMID:5500588), (PMID:9635428) RGD PMID:4784576 PMID:5500588 PMID:9635428 PMID:10072431 MGI:63127 NCBI chr17:32,631,379...32,635,361 JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857740|MGI:97485 (PMID:10364424) RGD PMID:10364424 NCBI chr19:66,094,718...66,097,420 JBrowse link
G Fst follistatin acts_upstream_of_or_within ISO MGI:2670967 (PMID:24019467) RGD PMID:24019467 NCBI chr 2:47,856,345...47,863,670 JBrowse link
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within ISO MGI:2669209|MGI:2670967 (PMID:24019467) RGD PMID:24019467 NCBI chr 7:1,311,732...1,325,211 JBrowse link
G Gdf3 growth differentiation factor 3 involved_in ISO (PMID:19864492) RGD PMID:19864492 NCBI chr 4:155,831,572...155,835,953 JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within ISO MGI:2445466 (PMID:15923624) RGD PMID:15923624 NCBI chr 2:187,291,227...187,310,770 JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857509 (PMID:9006072) RGD PMID:9006072 NCBI chr13:29,946,882...30,163,589 JBrowse link
G Gna11 G protein subunit alpha 11 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2151589 (PMID:9687499)
Ensembl
RGD
PMID:9687499 GO_REF:0000107 NCBI chr 7:8,814,285...8,828,628 JBrowse link
G Gnaq G protein subunit alpha q involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2151661 (PMID:9687499)
Ensembl
RGD
PMID:9687499 GO_REF:0000107 NCBI chr 1:222,852,453...223,098,754 JBrowse link
G Gnas GNAS complex locus acts_upstream_of_or_within ISO MGI:3043361 (PMID:15797856) RGD PMID:15797856 NCBI chr 3:183,489,648...183,554,570 JBrowse link
G Hapln1 hyaluronan and proteoglycan link protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:20,631,640...20,696,388 JBrowse link
G Hapln2 hyaluronan and proteoglycan link protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:173,488,909...173,496,824 JBrowse link
G Hapln3 hyaluronan and proteoglycan link protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:142,455,828...142,473,877 JBrowse link
G Hapln4 hyaluronan and proteoglycan link protein 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:19,333,106...19,341,243 JBrowse link
G Hdac4 histone deacetylase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3525071 (PMID:15537544)
Ensembl
RGD
PMID:15537544 GO_REF:0000107 NCBI chr 9:99,950,972...100,200,994 JBrowse link
G Hes7 hes family bHLH transcription factor 7 acts_upstream_of_or_within ISO MGI:2652222 (PMID:11641270) RGD PMID:11641270 NCBI chr10:53,824,124...53,828,934 JBrowse link
G Hexa hexosaminidase subunit alpha acts_upstream_of_or_within ISO MGI:96074 (PMID:8896570), (PMID:9184660) RGD PMID:8896570 PMID:9184660 NCBI chr 8:59,936,526...59,961,654 JBrowse link
G Hexb hexosaminidase subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:96073 (PMID:8896570), (PMID:9184660)
Ensembl
RGD
PMID:8896570 PMID:9184660 GO_REF:0000107 NCBI chr 2:28,483,997...28,504,165 JBrowse link
G Hoxa10 homeobox A10 acts_upstream_of_or_within ISO MGI:96192|MGI:96202 (PMID:12869760) RGD PMID:12869760 NCBI chr 4:81,331,591...81,340,878 JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO MGI:1934269|MGI:96193|MGI:96203 (PMID:12869760), (PMID:7596412) RGD PMID:7596412 PMID:12869760 NCBI chr 4:81,342,527...81,346,189 JBrowse link
G Hoxa5 homeo box A5 acts_upstream_of_or_within ISO MGI:2150397 (PMID:11900462) RGD PMID:11900462 NCBI chr 4:81,302,341...81,306,234 JBrowse link
G Hoxc10 homeo box C10 acts_upstream_of_or_within ISO MGI:96171|MGI:96202 (PMID:12869760) RGD PMID:12869760 NCBI chr 7:134,103,741...134,108,966 JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within ISO MGI:96172|MGI:96203 (PMID:12869760) RGD PMID:12869760 NCBI chr 7:134,091,224...134,094,738 JBrowse link
G Hoxc4 homeo box C4 acts_upstream_of_or_within ISO MGI:1857570|MGI:2150683 (PMID:8626021), (PMID:8660891) RGD PMID:8626021 PMID:8660891 NCBI chr 7:134,135,279...134,173,133 JBrowse link
G Hoxd10 homeo box D10 acts_upstream_of_or_within ISO MGI:1934269|MGI:96171|MGI:96192 (PMID:12869760), (PMID:9409668) RGD PMID:9409668 PMID:12869760 NCBI chr 3:59,594,516...59,597,725 JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:1857963|MGI:96172|MGI:96193 (PMID:12869760), (PMID:7925020) RGD PMID:7925020 PMID:12869760 NCBI chr 3:59,584,840...59,587,257 JBrowse link
G Hoxd12 homeo box D12 acts_upstream_of_or_within ISO MGI:1857964 (PMID:8620844) RGD PMID:8620844 NCBI chr 3:59,577,677...59,578,798 JBrowse link
G Hoxd13 homeo box D13 acts_upstream_of_or_within ISO MGI:1857871|MGI:2151805 (PMID:8106170), (PMID:8620844) RGD PMID:8106170 PMID:8620844 NCBI chr 3:59,570,647...59,573,963 JBrowse link
G Ift25 intraflagellar transport 25 acts_upstream_of_or_within ISO MGI:4432759|MGI:5426875 (PMID:22595669) RGD PMID:22595669 NCBI chr 5:127,264,450...127,291,225 JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within ISO MGI:3689350|MGI:5818514 (PMID:26996322) RGD PMID:26996322 NCBI chr 2:155,455,773...155,550,082 JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISO (PMID:21537345)
MGI:2176264|MGI:3609381 (PMID:16278811)
RGD PMID:16278811 PMID:21537345 NCBI chr 9:76,504,315...76,510,532 JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2657215 (PMID:15721140)
Ensembl
RGD
PMID:15721140 GO_REF:0000107 NCBI chr 6:131,983,059...132,005,665 JBrowse link
G Lgals3 galectin 3 acts_upstream_of_or_within ISO MGI:97011 (PMID:15800063) RGD PMID:15800063 NCBI chr15:20,620,083...20,632,019 JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 acts_upstream_of_or_within ISO MGI:2180017 (PMID:12379497) RGD PMID:12379497 NCBI chr 1:203,029,412...203,045,975 JBrowse link
G Mir140 microRNA 140 acts_upstream_of_or_within ISO MGI:4461000 (PMID:20466812) RGD PMID:20466812 NCBI chr19:52,375,293...52,375,391 JBrowse link
G Mmp14 matrix metallopeptidase 14 involved_in IBA
ISO
GO_REF:0000033
(PMID:10737763)
GO_Central
RGD
PMID:10737763 GO_REF:0000033 NCBI chr15:27,887,795...27,897,020 JBrowse link
G Mmp16 matrix metallopeptidase 16 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:31,312,280...31,556,276 JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1932294|MGI:96778 (PMID:15800063)
Ensembl
RGD
PMID:15800063 GO_REF:0000107 NCBI chr 3:174,103,474...174,111,434 JBrowse link
G Ncan neurocan involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:19,301,969...19,328,436 JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3714028 (PMID:17353270) RGD PMID:17353270 NCBI chr19:23,355,388...23,450,360 JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within ISO MGI:1931319 (PMID:11523821) RGD PMID:11523821 NCBI chr14:69,183,795...69,186,182 JBrowse link
G Nog noggin acts_upstream_of_or_within ISO MGI:1862000 (PMID:11784076) RGD PMID:11784076 NCBI chr10:74,625,874...74,627,501 JBrowse link
G Npr3 natriuretic peptide receptor 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:10377427)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:10377427 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:60,865,483...60,933,432 JBrowse link
G Pax1 paired box 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:1347481|MGI:1856222|MGI:1857560 (PMID:10364424), (PMID:11900462)
GO_REF:0000033
RGD
GO_Central
PMID:10364424 PMID:11900462 GO_REF:0000033 NCBI chr 3:134,792,330...134,801,637 JBrowse link
G Pitx1 paired-like homeodomain 1 acts_upstream_of_or_within ISO MGI:1857659 (PMID:10101115) RGD PMID:10101115 NCBI chr17:8,794,134...8,800,292 JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:30478137)
GO_REF:0000033
MGI:5014347 (PMID:21553379)
RGD
GO_Central
PMID:21553379 PMID:30478137 GO_REF:0000033 NCBI chr 6:17,208,171...17,217,488 JBrowse link
G Ptger2 prostaglandin E receptor 2 NAS RGD PMID:9440134 RGD:737645 NCBI chr15:18,215,013...18,228,714 JBrowse link
G Pth1r parathyroid hormone 1 receptor acts_upstream_of_or_within ISO MGI:2154519 (PMID:11606467), (PMID:8662561) RGD PMID:8662561 PMID:11606467 NCBI chr 8:119,572,295...119,597,405 JBrowse link
G Pthlh parathyroid hormone-like hormone acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9008714)
MGI:2154515 (PMID:11606467), (PMID:8314082)
GO_REF:0000107
RGD
Ensembl
PMID:8314082 PMID:9008714 PMID:11606467 GO_REF:0000107 NCBI chr 4:180,188,792...180,199,847 JBrowse link
G Pum2 pumilio RNA-binding family member 2 involved_in ISO (PMID:30735131) RGD PMID:30735131 NCBI chr 6:31,462,879...31,542,976 JBrowse link
G Rai1 retinoic acid induced 1 acts_upstream_of_or_within ISO MGI:3521985|MGI:3521986|MGI:3526160 (PMID:15746153), (PMID:17273973) RGD PMID:15746153 PMID:17273973 NCBI chr10:45,412,748...45,507,747 JBrowse link
G Rassf2 Ras association domain family member 2 acts_upstream_of_or_within ISO MGI:5314787 (PMID:22227519) RGD PMID:22227519 NCBI chr 3:139,697,187...139,733,402 JBrowse link
G Recql4 RecQ like helicase 4 acts_upstream_of_or_within ISO MGI:2677314 (PMID:16600186) RGD PMID:16600186 NCBI chr 7:110,304,092...110,311,426 JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within ISO MGI:2386954 (PMID:10700181) RGD PMID:10700181 NCBI chr17:12,124,749...12,300,044 JBrowse link
G Rpl38 ribosomal protein L38 acts_upstream_of_or_within ISO MGI:1859977|MGI:1861228|MGI:2447994 (PMID:21529712) RGD PMID:21529712 NCBI chr10:99,701,330...99,705,004 JBrowse link
G Runx1 RUNX family transcription factor 1 acts_upstream_of_or_within ISO MGI:2668479 (PMID:15389629) RGD PMID:15389629 NCBI chr11:45,325,778...45,560,300 JBrowse link
G Runx2 RUNX family transcription factor 2 acts_upstream_of_or_within ISO MGI:2176465|MGI:2176466 (PMID:14688224), (PMID:15050892) RGD PMID:14688224 PMID:15050892 NCBI chr 9:23,661,278...23,990,248 JBrowse link
G Serp1 stress-associated endoplasmic reticulum protein 1 acts_upstream_of_or_within ISO MGI:3652355 (PMID:16415102) RGD PMID:16415102 NCBI chr 2:142,757,254...142,761,243 JBrowse link
G Sh3pxd2b SH3 and PX domains 2B involved_in ISO (PMID:20137777) RGD PMID:20137777 NCBI chr10:17,422,906...17,538,977 JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:108051 (PMID:15183723) RGD PMID:15183723 NCBI chr 8:64,126,829...64,236,960 JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 acts_upstream_of_or_within ISO MGI:3575405 (PMID:17591962), (PMID:24585429) RGD PMID:17591962 PMID:24585429 NCBI chr19:34,162,337...34,245,786 JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISS
ISO
GO_REF:0000024
(PMID:8640233)
UniProt
RGD
PMID:8640233 GO_REF:0000024 NCBI chr10:98,305,744...98,311,250 JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:9207801)
UniProt
RGD
PMID:9207801 GO_REF:0000024 NCBI chr12:42,540,378...42,555,490 JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:24,230,064...24,253,219 JBrowse link
G Tgfb2 transforming growth factor, beta 2 acts_upstream_of_or_within
involved_in
ISO MGI:2384513 (PMID:15531369)
(PMID:9217007)
RGD PMID:9217007 PMID:15531369 NCBI chr13:98,160,075...98,261,771 JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 acts_upstream_of_or_within ISO MGI:87912 (PMID:16845371) RGD PMID:16845371 NCBI chr 5:66,449,348...66,506,371 JBrowse link
G Tle5 TLE family member 5, transcriptional modulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180116 (PMID:11984876)
Ensembl
RGD
PMID:11984876 GO_REF:0000107 NCBI chr 7:8,794,123...8,801,056 JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:1934269 (PMID:10227294) RGD PMID:10227294 NCBI chr11:88,343,647...88,554,543 JBrowse link
G Trappc2 trafficking protein particle complex subunit 2 involved_in ISO (PMID:10431248) RGD PMID:10431248 NCBI chr  X:31,617,107...31,647,035 JBrowse link
G Trps1 transcriptional repressor GATA binding 1 involved_in ISO (PMID:10615131) RGD PMID:10615131 NCBI chr 7:83,806,121...84,032,609 JBrowse link
G Usp1 ubiquitin specific peptidase 1 acts_upstream_of_or_within ISO MGI:4363583 (PMID:21925315) RGD PMID:21925315 NCBI chr 5:113,587,564...113,598,934 JBrowse link
G Vcan versican involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:20,761,718...20,860,637 JBrowse link
G Vdr vitamin D receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1859929 (PMID:9241280)
Ensembl
RGD
PMID:9241280 GO_REF:0000107 NCBI chr 7:130,864,764...130,916,757 JBrowse link
G Wdr5 WD repeat domain 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:11551928)
Ensembl
RGD
PMID:11551928 GO_REF:0000107 NCBI chr 3:10,836,964...10,856,682 JBrowse link
G Wfikkn1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1338027|MGI:95586 (PMID:24019467)
Ensembl
RGD
PMID:24019467 GO_REF:0000107 NCBI chr10:14,896,442...14,898,770 JBrowse link
G Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 acts_upstream_of_or_within ISO MGI:1338027 (PMID:24019467) RGD PMID:24019467 NCBI chr10:79,185,563...79,191,657 JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within ISO MGI:1856943|MGI:2182708 (PMID:10835630), (PMID:6068186) RGD PMID:6068186 PMID:10835630 MGI:61278 NCBI chr 8:57,885,886...58,073,507 JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:3698161 (PMID:17127413) RGD PMID:17127413 NCBI chr  X:136,123,662...136,129,627 JBrowse link
articular cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bgn biglycan involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:107942 (PMID:19932218)
Ensembl
RGD
PMID:19932218 GO_REF:0000107 NCBI chr  X:151,197,296...151,209,458 JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:1857079|MGI:3785162 (PMID:22359666), (PMID:22927960), (PMID:28402956) RGD PMID:22359666 PMID:22927960 PMID:28402956 NCBI chr 1:22,518,051...22,583,044 JBrowse link
G Epyc epiphycan involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:88158 (PMID:19932218)
GO_Central
RGD
PMID:19932218 GO_REF:0000033 NCBI chr 7:32,436,620...32,474,326 JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within ISO MGI:3665440|MGI:5818514 (PMID:26098911) RGD PMID:26098911 NCBI chr 2:155,455,773...155,550,082 JBrowse link
G Ogn osteoglycin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:15,032,069...15,052,626 JBrowse link
G Optc opticin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:45,353,954...45,368,254 JBrowse link
G Pbxip1 PBX homeobox interacting protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3665440|MGI:6363078|MGI:6363079 (PMID:30659184)
Ensembl
RGD
PMID:30659184 GO_REF:0000107 NCBI chr 2:177,154,056...177,167,810 JBrowse link
bone development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07063281.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Akap13 A-kinase anchoring protein 13 involved_in ISS
ISO
GO_REF:0000024
(PMID:25892096)
UniProt
RGD
PMID:25892096 GO_REF:0000024 NCBI chr 1:129,313,183...129,619,647 JBrowse link
G Amer1 APC membrane recruitment protein 1 acts_upstream_of_or_within ISO MGI:2446599|MGI:5086003 (PMID:21571217) RGD PMID:21571217 NCBI chr  X:60,300,595...60,316,480 JBrowse link
G Ankrd11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO MGI:3797584 (PMID:17986521), (PMID:33996804) RGD PMID:17986521 PMID:33996804 NCBI chr19:50,940,284...51,098,962 JBrowse link
G Asxl1 ASXL transcriptional regulator 1 acts_upstream_of_or_within ISO (PMID:22876197) RGD PMID:22876197 NCBI chr 3:162,273,828...162,341,742 JBrowse link
G Bbln bublin coiled coil protein acts_upstream_of_or_within ISO (PMID:32569872) RGD PMID:32569872 NCBI chr 3:15,674,577...15,677,322 JBrowse link
G Bbx BBX high mobility group box domain containing acts_upstream_of_or_within ISO (PMID:22876197) RGD PMID:22876197 NCBI chr11:50,381,249...50,628,934 JBrowse link
G Bglap bone gamma-carboxyglutamate protein involved_in IEP
IBA
IEA
GO_REF:0000033
GO_REF:0000002
GO_Central
InterPro
RGD
PMID:3488316 GO_REF:0000002 GO_REF:0000033, RGD:2316176 NCBI chr 2:176,136,341...176,137,318 JBrowse link
G Bgn biglycan involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:107942 (PMID:19932218)
Ensembl
RGD
PMID:19932218 GO_REF:0000107 NCBI chr  X:151,197,296...151,209,458 JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in IEA
ISO
GO_REF:0000107
MGI:3696052 (PMID:20551513)
Ensembl
RGD
PMID:20551513 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416 JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:8358941) RGD PMID:8358941 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Bmp6 bone morphogenetic protein 6 involved_in ISO (PMID:16798745) RGD PMID:16798745 NCBI chr17:26,523,704...26,785,558 JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B involved_in ISO MGI:3696052 (PMID:20551513) RGD PMID:20551513 NCBI chr 2:233,211,525...233,544,344 JBrowse link
G Cadm1 cell adhesion molecule 1 acts_upstream_of_or_within ISO (PMID:22876197) RGD PMID:22876197 NCBI chr 8:47,847,836...48,178,703 JBrowse link
G Ccn4 cellular communication network factor 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:15331410), (PMID:25864198)
Ensembl
RGD
PMID:15331410 PMID:25864198 GO_REF:0000107 NCBI chr 7:100,534,578...100,566,287 JBrowse link
G Cfh complement factor H acts_upstream_of_or_within ISO (PMID:19828624) RGD PMID:19828624 NCBI chr13:51,512,376...51,613,829 JBrowse link
G Chad chondroadherin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5529270 (PMID:23755099)
Ensembl
RGD
PMID:23755099 GO_REF:0000107 NCBI chr10:79,512,170...79,515,941 JBrowse link
G Col2a1 collagen type II alpha 1 chain acts_upstream_of_or_within ISO MGI:2148858 (PMID:11254354) RGD PMID:11254354 NCBI chr 7:130,977,561...131,006,627 JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO MGI:2153356 (PMID:22448243) RGD PMID:22448243 NCBI chr20:11,905,690...11,924,111 JBrowse link
G Cr2 complement C3d receptor 2 acts_upstream_of_or_within ISO (PMID:19828624) RGD PMID:19828624 NCBI chr13:109,207,034...109,244,980 JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IEP RGD PMID:15012600 RGD:4891061 NCBI chr 8:63,449,148...63,476,534 JBrowse link
G Dbh dopamine beta-hydroxylase IEP RGD PMID:20090303 RGD:5129678 NCBI chr 3:30,886,313...30,903,313 JBrowse link
G Dmd dystrophin acts_upstream_of_or_within ISO MGI:1342270 (PMID:23798567) RGD PMID:23798567 NCBI chr  X:51,070,098...53,437,845 JBrowse link
G Dym dymeclin involved_in ISS
ISO
GO_REF:0000024
(PMID:21280149)
UniProt
RGD
PMID:21280149 GO_REF:0000024 NCBI chr18:68,605,131...68,900,905 JBrowse link
G Eng endoglin IEP humerus RGD PMID:20865666 RGD:7257537 NCBI chr 3:36,332,190...36,370,324 JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:1857079|MGI:3785162 (PMID:28798354), (PMID:32980560) RGD PMID:28798354 PMID:32980560 NCBI chr 1:22,518,051...22,583,044 JBrowse link
G Epyc epiphycan involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:5762921|MGI:88158 (PMID:19932218)
GO_Central
RGD
PMID:19932218 GO_REF:0000033 NCBI chr 7:32,436,620...32,474,326 JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in ISO (PMID:18596921) RGD PMID:18596921 NCBI chr 1:244,584,477...244,590,578 JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:3629660 (PMID:16989802) RGD PMID:16989802 NCBI chr 1:194,175,703...194,280,914 JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:2135670 (PMID:20053668) RGD PMID:20053668 NCBI chr14:81,211,800...81,227,215 JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO MGI:3757560 (PMID:24046454) RGD PMID:24046454 NCBI chr 6:30,017,952...30,039,269 JBrowse link
G Gas5 growth arrest specific 5 acts_upstream_of_or_within ISO (PMID:33006314) RGD PMID:33006314 NCBI chr13:73,303,611...73,306,932 JBrowse link
G Gja1 gap junction protein, alpha 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:25270829)
UniProt
RGD
PMID:25270829 GO_REF:0000024 NCBI chr20:36,302,490...36,315,010 JBrowse link
G Gnas GNAS complex locus involved_in ISO (PMID:12719376) RGD PMID:12719376 NCBI chr 3:183,489,648...183,554,570 JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO MGI:2135973 (PMID:7789268) RGD PMID:7789268 NCBI chr 4:81,342,527...81,346,189 JBrowse link
G Hsd17b1 hydroxysteroid (17-beta) dehydrogenase 1 IEP RGD PMID:15012600 RGD:4891061 NCBI chr10:86,009,728...86,011,928 JBrowse link
G Hsd17b2 hydroxysteroid (17-beta) dehydrogenase 2 IEP RGD PMID:15012600 RGD:4891061 NCBI chr19:45,753,576...45,825,203 JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO MGI:4415188 (PMID:19751987) RGD PMID:19751987 NCBI chr14:1,031,588...1,059,494 JBrowse link
G Ift172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4821824 (PMID:21653639)
Ensembl
RGD
PMID:21653639 GO_REF:0000107 NCBI chr 6:30,801,841...30,841,239 JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within ISO (PMID:35733270) RGD PMID:35733270 NCBI chr 2:155,455,773...155,550,082 JBrowse link
G Igf1 insulin-like growth factor 1 IEP RGD PMID:24735836 RGD:11352746 NCBI chr 7:24,169,608...24,249,446 JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within ISO (PMID:30467097) RGD PMID:30467097 NCBI chr 3:45,046,295...45,170,532 JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO MGI:94909 (PMID:23798567) RGD PMID:23798567 NCBI chr19:11,603,129...12,048,930 JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in ISO (PMID:17700537) RGD PMID:17700537 NCBI chr 1:200,814,247...200,917,581 JBrowse link
G Map2k6 mitogen-activated protein kinase kinase 6 involved_in ISO MGI:3696052 (PMID:20551513) RGD PMID:20551513 NCBI chr10:95,872,747...95,987,747 JBrowse link
G Map3k7 mitogen activated protein kinase kinase kinase 7 involved_in ISO MGI:3696052 (PMID:20551513) RGD PMID:20551513 NCBI chr 5:51,149,524...51,212,012 JBrowse link
G Mapk11 mitogen-activated protein kinase 11 involved_in ISO MGI:3696052 (PMID:20551513) RGD PMID:20551513 NCBI chr 7:122,098,120...122,105,023 JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in IEA
ISO
GO_REF:0000107
MGI:3696052 (PMID:20551513)
Ensembl
RGD
PMID:20551513 GO_REF:0000107 NCBI chr20:6,751,288...6,812,294 JBrowse link
G Mcph1 microcephalin 1 acts_upstream_of_or_within ISO MGI:4431685 (PMID:23516444) RGD PMID:23516444 NCBI chr16:71,021,855...71,224,067 JBrowse link
G Miga2 mitoguardin 2 acts_upstream_of_or_within ISO (PMID:22876197) RGD PMID:22876197 NCBI chr 3:13,636,235...13,658,895 JBrowse link
G Mmp14 matrix metallopeptidase 14 acts_upstream_of_or_within ISO MGI:1276107 (PMID:18022611) RGD PMID:18022611 NCBI chr15:27,887,795...27,897,020 JBrowse link
G Mmp16 matrix metallopeptidase 16 acts_upstream_of_or_within ISO MGI:101900 (PMID:18022611) RGD PMID:18022611 NCBI chr 5:31,312,280...31,556,276 JBrowse link
G Myoc myocilin involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:23629661)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23629661 GO_REF:0000024 GO_REF:0000107 NCBI chr13:74,976,730...74,987,128 JBrowse link
G Nos3 nitric oxide synthase 3 IEP femur RGD PMID:10352094 RGD:7794707 NCBI chr 4:11,686,088...11,706,604 JBrowse link
G Notum NOTUM, palmitoleoyl-protein carboxylesterase acts_upstream_of_or_within ISO
IMP
(PMID:30622831)
MGI:4214308 (PMID:30622831)
RGD PMID:30622831 PMID:30622831 RGD:127285401 NCBI chr10:105,933,245...105,940,327 JBrowse link
G Npr2 natriuretic peptide receptor 2 acts_upstream_of_or_within ISO MGI:1856702 (PMID:624676) RGD PMID:624676 NCBI chr 5:62,678,197...62,697,360 JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within ISO MGI:3851507 (PMID:19483677) RGD PMID:19483677 NCBI chr14:76,833,179...76,911,304 JBrowse link
G Ogn osteoglycin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:15,032,069...15,052,626 JBrowse link
G Opa3 outer mitochondrial membrane lipid metabolism regulator OPA3 acts_upstream_of_or_within ISO MGI:5312669 (PMID:27106103) RGD PMID:27106103 NCBI chr 1:78,879,612...78,910,453 JBrowse link
G Optc opticin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:45,353,954...45,368,254 JBrowse link
G P3h1 prolyl 3-hydroxylase 1 involved_in ISO
IEA
(PMID:17277775), (PMID:22615817)
GO_REF:0000107
RGD
Ensembl
PMID:17277775 PMID:22615817 GO_REF:0000107 NCBI chr 5:132,841,868...132,856,664 JBrowse link
G Papss2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 acts_upstream_of_or_within ISO MGI:1856688 (PMID:624676) RGD PMID:624676 NCBI chr 1:239,867,597...239,952,614 JBrowse link
G Pdgfa platelet derived growth factor subunit A acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1859631 (PMID:23938297)
GO_REF:0000107
RGD
Ensembl
PMID:23938297 GO_REF:0000107 NCBI chr12:15,645,549...15,667,056 JBrowse link
G Pdgfc platelet derived growth factor C acts_upstream_of_or_within ISO MGI:97527 (PMID:23938297) RGD PMID:23938297 NCBI chr 2:168,613,409...168,791,575 JBrowse link
G Phex phosphate regulating endopeptidase X-linked IEP RGD PMID:11064151 RGD:11556272 NCBI chr  X:41,422,561...41,671,226 JBrowse link
G Pls3 plastin 3 involved_in ISO
IEA
(PMID:24088043)
GO_REF:0000107
RGD
Ensembl
PMID:24088043 GO_REF:0000107 NCBI chr  X:111,589,193...111,683,908 JBrowse link
G Poc1a POC1 centriolar protein A acts_upstream_of_or_within ISO MGI:2135614 (PMID:26496357) RGD PMID:26496357 NCBI chr 8:106,922,058...106,991,678 JBrowse link
G Ppib peptidylprolyl isomerase B involved_in ISO (PMID:20089953) RGD PMID:20089953 NCBI chr 8:66,603,877...66,609,734 JBrowse link
G Prpsap2 phosphoribosyl pyrophosphate synthetase-associated protein 2 acts_upstream_of_or_within ISO (PMID:22876197) RGD PMID:22876197 NCBI chr10:46,910,282...46,945,401 JBrowse link
G Ptger4 prostaglandin E receptor 4 involved_in IDA PMID:19233324 UniProt PMID:19233324 RGD:8554254 NCBI chr 2:56,061,699...56,074,594 JBrowse link
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within ISO MGI:97858 (PMID:7607067), (PMID:9376317) RGD PMID:7607067 PMID:9376317 NCBI chr10:83,883,490...83,928,932 JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within ISO MGI:97858 (PMID:7607067) RGD PMID:7607067 NCBI chr15:10,837,252...11,482,037 JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within
involved_in
ISO MGI:97856|MGI:97857 (PMID:7607067)
(PMID:19389355)
RGD PMID:7607067 PMID:19389355 NCBI chr 7:133,367,833...133,390,301 JBrowse link
G Rpl13 ribosomal protein L13 involved_in ISO (PMID:31630789) RGD PMID:31630789 NCBI chr19:68,062,442...68,065,065 JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 acts_upstream_of_or_within ISO (PMID:22876197) RGD PMID:22876197 NCBI chr 2:182,898,738...182,930,283 JBrowse link
G Sh3pxd2b SH3 and PX domains 2B involved_in ISO (PMID:20137777) RGD PMID:20137777 NCBI chr10:17,422,906...17,538,977 JBrowse link
G Slc10a7 solute carrier family 10, member 7 involved_in ISO (PMID:30082715) RGD PMID:30082715 NCBI chr19:29,183,143...29,407,470 JBrowse link
G Slc38a10 solute carrier family 38, member 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:22876197)
Ensembl
RGD
PMID:22876197 GO_REF:0000107 NCBI chr10:105,885,250...105,935,043 JBrowse link
G Smad1 SMAD family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1328787|MGI:1859993 (PMID:19224984)
Ensembl
RGD
PMID:19224984 GO_REF:0000107 NCBI chr19:45,417,430...45,477,962 JBrowse link
G Smad5 SMAD family member 5 acts_upstream_of_or_within ISO MGI:109452|MGI:1859993 (PMID:19224984) RGD PMID:19224984 NCBI chr17:7,862,332...7,891,678 JBrowse link
G Smad9 SMAD family member 9 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:109452|MGI:1328787 (PMID:19224984)
Ensembl
RGD
PMID:19224984 GO_REF:0000107 NCBI chr 2:138,956,326...139,006,315 JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 acts_upstream_of_or_within ISO (PMID:27325675) RGD PMID:27325675 NCBI chr19:34,162,337...34,245,786 JBrowse link
G Sparc secreted protein acidic and cysteine rich acts_upstream_of_or_within ISO (PMID:22876197) RGD PMID:22876197 NCBI chr10:39,516,394...39,538,252 JBrowse link
G Spns2 SPNS lysolipid transporter 2, sphingosine-1-phosphate acts_upstream_of_or_within ISO (PMID:22876197) RGD PMID:22876197 NCBI chr10:57,067,348...57,105,969 JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:15012600 RGD:4891061 NCBI chr 1:35,514,914...35,548,898 JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 IEP RGD PMID:15012600 RGD:4891061 NCBI chr 6:21,426,225...21,465,727 JBrowse link
G Stc1 stanniocalcin 1 involved_in ISO (PMID:16377640) RGD PMID:16377640 NCBI chr15:44,299,591...44,311,695 JBrowse link
G Sulf1 sulfatase 1 involved_in IEA
ISO
ISS
GO_REF:0000104
UniProtKB:Q8CFG0 (PMID:17593974)
GO_REF:0000024
UniProt
RGD
PMID:17593974 GO_REF:0000024 GO_REF:0000104 NCBI chr 5:6,362,894...6,526,174 JBrowse link
G Sulf2 sulfatase 2 involved_in ISO UniProtKB:Q8K007 (PMID:17593974) RGD PMID:17593974 NCBI chr 3:154,822,079...154,904,566 JBrowse link
G Tgm2 transglutaminase 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 3:167,192,612...167,221,845 JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO MGI:1921416 (PMID:27188440) RGD PMID:27188440 NCBI chr 5:68,460,304...68,496,026 JBrowse link
G Tnfsf11 TNF superfamily member 11 acts_upstream_of_or_within ISO MGI:5614816 (PMID:26234751) RGD PMID:26234751 NCBI chr15:60,083,008...60,114,479 JBrowse link
G Trim45 tripartite motif-containing 45 acts_upstream_of_or_within ISO (PMID:22876197) RGD PMID:22876197 NCBI chr 2:191,038,355...191,047,826 JBrowse link
G Trip11 thyroid hormone receptor interactor 11 acts_upstream_of_or_within ISO MGI:3836913|MGI:4829605 (PMID:20089971) RGD PMID:20089971 NCBI chr 6:120,995,242...121,067,693 JBrowse link
G Ttc9 tetratricopeptide repeat domain 9 acts_upstream_of_or_within ISO (PMID:25798063) RGD PMID:25798063 NCBI chr 6:107,064,527...107,099,361 JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (PMID:11406614) RGD PMID:11406614 NCBI chr 4:161,590,478...161,632,244 JBrowse link
G Twist1 twist family bHLH transcription factor 1 IEP RGD PMID:8773900 RGD:5131604 NCBI chr 6:50,674,910...50,676,904 JBrowse link
G Vkorc1 vitamin K epoxide reductase complex, subunit 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19492146)
UniProt
RGD
PMID:19492146 GO_REF:0000024 NCBI chr 1:191,932,969...191,935,490 JBrowse link
G Wnt1 Wnt family member 1 involved_in ISO (PMID:23499309) RGD PMID:23499309 NCBI chr 7:131,817,558...131,821,605 JBrowse link
bone growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comp cartilage oligomeric matrix protein acts_upstream_of_or_within ISO MGI:3758741 (PMID:17588960) RGD PMID:17588960 NCBI chr16:19,047,206...19,055,584 JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:1857079 (PMID:9541520) RGD PMID:9541520 NCBI chr 1:22,518,051...22,583,044 JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:21185280) RGD PMID:21185280 NCBI chr 7:86,265,651...86,544,488 JBrowse link
G Lep leptin involved_in ISS
ISO
GO_REF:0000024
(PMID:10660043)
UniProt
RGD
PMID:10660043 GO_REF:0000024 NCBI chr 4:58,626,529...58,640,663 JBrowse link
G Lepr leptin receptor involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:10660043)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:10660043 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:121,409,735...121,593,201 JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in ISO MGI:4358115|MGI:5567995|MGI:5911053 (PMID:23065701), (PMID:29199951), (PMID:30249793) RGD PMID:23065701 PMID:29199951 PMID:30249793 NCBI chr 5:62,678,197...62,697,360 JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3575405 (PMID:17626887), (PMID:24585429)
Ensembl
RGD
PMID:17626887 PMID:24585429 GO_REF:0000107 NCBI chr19:34,162,337...34,245,786 JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:152,660,259...152,671,682 JBrowse link
bone marrow development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asxl1 ASXL transcriptional regulator 1 acts_upstream_of_or_within ISO MGI:4418244 (PMID:19861679) RGD PMID:19861679 NCBI chr 3:162,273,828...162,341,742 JBrowse link
G Ctc1 CST telomere replication complex component 1 acts_upstream_of_or_within ISO MGI:5427642 (PMID:22531781) RGD PMID:22531781 NCBI chr10:54,212,537...54,234,146 JBrowse link
G Fancb FA complementation group B acts_upstream_of_or_within ISO (PMID:26658157) RGD PMID:26658157 NCBI chr  X:33,035,387...33,051,993 JBrowse link
G Hoxb4 homeo box B4 acts_upstream_of_or_within ISO MGI:3045971 (PMID:14962901) RGD PMID:14962901 NCBI chr10:81,284,552...81,287,134 JBrowse link
G Lipa lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2451080 (PMID:20348241)
Ensembl
RGD
PMID:20348241 GO_REF:0000107 NCBI chr 1:241,437,524...241,470,936 JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in ISO (PMID:17680723) RGD PMID:17680723 NCBI chr 1:200,814,247...200,917,581 JBrowse link
G Lrrc17 leucine rich repeat containing 17 involved_in ISO (PMID:19336404) RGD PMID:19336404 NCBI chr 4:13,501,428...13,531,845 JBrowse link
G Mir188 microRNA 188 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr  X:15,247,715...15,247,794 JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C involved_in ISO (PMID:21911094) RGD PMID:21911094 NCBI chr13:52,147,717...52,259,810 JBrowse link
G Sbds Sbds, ribosome maturation factor involved_in ISO (PMID:15342903) RGD PMID:15342903 NCBI chr12:26,420,410...26,429,650 JBrowse link
G Tp53 tumor protein p53 involved_in ISO
IEA
(PMID:30146126)
GO_REF:0000107
RGD
Ensembl
PMID:30146126 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300 JBrowse link
bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr3 fibroblast growth factor receptor 3 involved_in ISO (PMID:20582225) RGD PMID:20582225 NCBI chr14:81,211,800...81,227,215 JBrowse link
G Gh1 growth hormone 1 involved_in ISO (PMID:20110402) RGD PMID:20110402 NCBI chr10:91,727,883...91,729,860 JBrowse link
G Mbtps2 membrane-bound transcription factor peptidase, site 2 involved_in ISO (PMID:27380894) RGD PMID:27380894 NCBI chr  X:37,410,914...37,461,130 JBrowse link
bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 acts_upstream_of_or_within ISO MGI:4127698 (PMID:22936354) RGD PMID:22936354 NCBI chr 7:126,933,919...127,113,588 JBrowse link
G Asxl2 ASXL transcriptional regulator 2 acts_upstream_of ISO MGI:3840841 (PMID:21490954) RGD PMID:21490954 NCBI chr 6:26,425,017...26,514,899 JBrowse link
G Ccdc154 coiled-coil domain containing 154 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:5702426 (PMID:20121924)
GO_Central
RGD
PMID:20121924 GO_REF:0000033 NCBI chr10:14,177,271...14,187,378 JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:1857079|MGI:2385534 (PMID:22359666), (PMID:25260930) RGD PMID:22359666 PMID:25260930 NCBI chr 1:22,518,051...22,583,044 JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within ISO MGI:3689350|MGI:5818514 (PMID:26996322) RGD PMID:26996322 NCBI chr 2:155,455,773...155,550,082 JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO
IEA
(PMID:16433617)
GO_REF:0000107
RGD
Ensembl
PMID:16433617 GO_REF:0000107 NCBI chr 7:24,169,608...24,249,446 JBrowse link
G Lep leptin IDA RGD PMID:21353474 RGD:5128507 NCBI chr 4:58,626,529...58,640,663 JBrowse link
G Phospho1 phosphoethanolamine/phosphocholine phosphatase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:5049904 (PMID:21272676)
GO_Central
RGD
PMID:21272676 GO_REF:0000033 NCBI chr10:80,762,062...80,769,596 JBrowse link
G Snx10 sorting nexin 10 acts_upstream_of_or_within ISO MGI:5690193 (PMID:25811986) RGD PMID:25811986 NCBI chr 4:81,943,262...82,007,667 JBrowse link
bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp5 acid phosphatase 5, tartrate resistant involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180086 (PMID:8898228)
Ensembl
RGD
PMID:8898228 GO_REF:0000107 NCBI chr 8:28,939,984...28,946,639 JBrowse link
G Actn3 actinin alpha 3 involved_in ISO (PMID:21784188) RGD PMID:21784188 NCBI chr 1:202,159,081...202,175,012 JBrowse link
G Atg9a autophagy related 9A involved_in ISS
ISO
GO_REF:0000024
(PMID:27811852)
UniProt
RGD
PMID:27811852 GO_REF:0000024 NCBI chr 9:76,677,403...76,688,050 JBrowse link
G Cdx1 caudal type homeo box 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2154514|MGI:97858 (PMID:11784046)
Ensembl
RGD
PMID:11784046 GO_REF:0000107 NCBI chr18:54,472,587...54,490,913 JBrowse link
G Chsy1 chondroitin sulfate synthase 1 acts_upstream_of_or_within ISO MGI:5007063 (PMID:22280990) RGD PMID:22280990 NCBI chr 1:119,689,626...119,750,711 JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2179740 (PMID:20549734) RGD PMID:20549734 NCBI chr 1:12,312,426...12,314,869 JBrowse link
G Col9a1 collagen type IX alpha 1 chain acts_upstream_of_or_within ISO MGI:88469 (PMID:18191556) RGD PMID:18191556 NCBI chr 9:26,585,034...26,668,222 JBrowse link
G Comp cartilage oligomeric matrix protein acts_upstream_of_or_within ISO MGI:88465 (PMID:18191556) RGD PMID:18191556 NCBI chr16:19,047,206...19,055,584 JBrowse link
G Cst5 cystatin D involved_in ISO MGI:3629665 (PMID:16680148) RGD PMID:16680148 NCBI chr 3:137,573,194...137,577,754 JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 involved_in ISO (PMID:22019272) RGD PMID:22019272 NCBI chr 4:117,041,808...117,058,628 JBrowse link
G Dhrs3 dehydrogenase/reductase 3 acts_upstream_of_or_within ISO MGI:5007106 (PMID:24005908) RGD PMID:24005908 NCBI chr 5:156,747,939...156,782,420 JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within ISO MGI:2180474 (PMID:16330189) RGD PMID:16330189 NCBI chr 4:35,965,579...35,969,973 JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:20080592), (PMID:20404326) RGD PMID:20080592 PMID:20404326 NCBI chr 7:86,265,651...86,544,488 JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153799 (PMID:10518547) RGD PMID:10518547 NCBI chr 1:194,175,703...194,280,914 JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within
involved_in
ISO MGI:1931521 (PMID:19407216)
(PMID:20582225)
RGD PMID:19407216 PMID:20582225 NCBI chr14:81,211,800...81,227,215 JBrowse link
G Glg1 golgi glycoprotein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4829764 (PMID:20530870)
Ensembl
RGD
PMID:20530870 GO_REF:0000107 NCBI chr19:39,124,892...39,224,178 JBrowse link
G Has2 hyaluronan synthase 2 acts_upstream_of_or_within ISO MGI:2176070|MGI:4360705 (PMID:21246657) RGD PMID:21246657 NCBI chr 7:90,002,929...90,028,933 JBrowse link
G Ifitm5 interferon induced transmembrane protein 5 involved_in ISO
IBA
(PMID:24519609)
(PMID:20838829)
GO_REF:0000033
RGD
GO_Central
PMID:20838829 PMID:24519609 GO_REF:0000033 NCBI chr 1:196,045,836...196,052,554 JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within ISO MGI:3856827 (PMID:21227999) RGD PMID:21227999 NCBI chr 2:155,455,773...155,550,082 JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in ISO (PMID:19673927), (PMID:20146170), (PMID:20630166) RGD PMID:19673927 PMID:20146170 PMID:20630166 NCBI chr 1:200,814,247...200,917,581 JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1861309 RGD MGI:61254 NCBI chr 4:167,269,856...167,400,364 JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 acts_upstream_of_or_within ISO MGI:2180017 (PMID:11790802), (PMID:20530870) RGD PMID:11790802 PMID:20530870 NCBI chr 1:203,029,412...203,045,975 JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:15166119) RGD PMID:15166119 NCBI chr 8:110,999,948...111,022,795 JBrowse link
G Mmp13 matrix metallopeptidase 13 involved_in ISO
ISS
(PMID:16167086)
GO_REF:0000024
RGD
UniProt
PMID:16167086 GO_REF:0000024 NCBI chr 8:4,497,960...4,508,239 JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:1933766|MGI:97169 (PMID:12489152), (PMID:16330189), (PMID:17693062) RGD PMID:12489152 PMID:16330189 PMID:17693062 NCBI chr14:77,185,802...77,189,735 JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within ISO MGI:97168 (PMID:17693062) RGD PMID:17693062 NCBI chr17:11,097,214...11,102,879 JBrowse link
G Osr2 odd-skipped related transcription factor 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:17547533)
UniProt
RGD
PMID:17547533 GO_REF:0000024 NCBI chr 7:66,487,841...66,495,003 JBrowse link
G Pappa2 pappalysin 2 acts_upstream_of_or_within ISO MGI:5504500 (PMID:23457539) RGD PMID:23457539 NCBI chr13:70,873,918...71,147,874 JBrowse link
G Pax1 paired box 1 acts_upstream_of_or_within ISO MGI:1856223|MGI:1856225 (PMID:7607069) RGD PMID:7607069 NCBI chr 3:134,792,330...134,801,637 JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within ISO MGI:1931079|MGI:88360 (PMID:11784046), (PMID:8388780) RGD PMID:8388780 PMID:11784046 NCBI chr 7:133,367,833...133,390,301 JBrowse link
G Ripply1 ripply transcriptional repressor 1 acts_upstream_of_or_within ISO MGI:2685968|MGI:4459309 (PMID:20346937) RGD PMID:20346937 NCBI chr  X:108,225,333...108,231,537 JBrowse link
G Ripply2 ripply transcriptional repressor 2 acts_upstream_of_or_within ISO MGI:3614797 (PMID:20346937) RGD PMID:20346937 NCBI chr 8:87,974,444...87,979,002 JBrowse link
G Sfrp4 secreted frizzled-related protein 4 involved_in ISO
IEA
ISS
(PMID:27355534)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:27355534 GO_REF:0000024 GO_REF:0000107 NCBI chr17:45,278,867...45,330,806 JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (PMID:9284043) RGD PMID:9284043 NCBI chr 5:170,995,851...171,064,957 JBrowse link
G Sp5 Sp5 transcription factor acts_upstream_of_or_within ISO MGI:98472 (PMID:11071760) RGD PMID:11071760 NCBI chr 3:55,274,931...55,277,733 JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO MGI:1927715 (PMID:11071760) RGD PMID:11071760 NCBI chr 1:52,298,104...52,309,813 JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISS
ISO
GO_REF:0000024
(PMID:8622766)
UniProt
RGD
PMID:8622766 GO_REF:0000024 NCBI chr17:24,230,064...24,253,219 JBrowse link
bone trabecula formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a1 collagen type I alpha 1 chain acts_upstream_of_or_within ISO MGI:97009 (PMID:17440987) RGD PMID:17440987 NCBI chr10:80,380,458...80,397,461 JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:1857079 (PMID:22359666) RGD PMID:22359666 NCBI chr 1:22,518,051...22,583,044 JBrowse link
G Fbn2 fibrillin 2 involved_in ISO (PMID:20855508) RGD PMID:20855508 NCBI chr18:51,499,670...51,703,976 JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:88467 (PMID:17440987)
Ensembl
RGD
PMID:17440987 GO_REF:0000107 NCBI chr19:30,327,643...30,355,856 JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926381 (PMID:10742104)
Ensembl
RGD
PMID:10742104 GO_REF:0000107 NCBI chr17:11,097,214...11,102,879 JBrowse link
G Ppargc1b PPARG coactivator 1 beta involved_in IEA
ISO
GO_REF:0000107
(PMID:19252502)
Ensembl
RGD
PMID:19252502 GO_REF:0000107 NCBI chr18:54,758,891...54,861,103 JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3045799 (PMID:14976225)
Ensembl
RGD
PMID:14976225 GO_REF:0000107 NCBI chr16:75,278,325...75,316,736 JBrowse link
G Thbs3 thrombospondin 3 acts_upstream_of_or_within ISO MGI:3581964 (PMID:15964815) RGD PMID:15964815 NCBI chr 2:176,919,549...176,931,357 JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI:1931048 (PMID:22886301) RGD PMID:22886301 NCBI chr 9:22,452,854...22,468,194 JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO MGI:3582610 (PMID:15728361) RGD PMID:15728361 NCBI chr 7:129,922,088...129,927,892 JBrowse link
bronchus cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2429649 (PMID:24218621) RGD PMID:24218621 NCBI chr10:98,305,744...98,311,250 JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:3522206 (PMID:24218621) RGD PMID:24218621 NCBI chr 9:21,924,050...21,933,338 JBrowse link
cartilage condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856465 (PMID:3070812)
Ensembl
RGD
PMID:3070812 GO_REF:0000107 NCBI chr 1:142,390,951...142,453,779 JBrowse link
G Barx2 BARX homeobox 2 acts_upstream_of_or_within ISO (PMID:15800003) RGD PMID:15800003 NCBI chr 8:30,251,132...30,319,105 JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B acts_upstream_of_or_within ISO MGI:2158498 (PMID:10631181) RGD PMID:10631181 NCBI chr 2:233,211,525...233,544,344 JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within ISO (PMID:15305294) RGD PMID:15305294 NCBI chr 1:22,621,498...22,624,614 JBrowse link
G Chad chondroadherin IEP RGD PMID:9461555 RGD:69806 NCBI chr10:79,512,170...79,515,941 JBrowse link
G Col11a1 collagen type XI alpha 1 chain acts_upstream_of_or_within ISO MGI:1856399 (PMID:3070812) RGD PMID:3070812 NCBI chr 2:201,820,715...202,013,853 JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857275 (PMID:3070812)
Ensembl
RGD
PMID:3070812 GO_REF:0000107 NCBI chr 7:130,977,561...131,006,627 JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within ISO MGI:98726 (PMID:8565825) RGD PMID:8565825 NCBI chr 1:200,023,937...200,027,793 JBrowse link
G Fgf6 fibroblast growth factor 6 acts_upstream_of_or_within ISO MGI:98726 (PMID:8565825) RGD PMID:8565825 NCBI chr 4:159,854,913...159,863,447 JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in IEA
ISO
GO_REF:0000107
(PMID:17202865)
Ensembl
RGD
PMID:17202865 GO_REF:0000107 NCBI chr20:6,751,288...6,812,294 JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:17360777)
Ensembl
RGD
PMID:17360777 GO_REF:0000107 NCBI chr 6:41,446,683...41,452,584 JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO MGI:1857219 (PMID:8565825) RGD PMID:8565825 NCBI chr 7:42,802,946...42,806,177 JBrowse link
G Otor otoraplin involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:10998416)
GO_Central
RGD
PMID:10998416 GO_REF:0000033 NCBI chr 3:130,415,339...130,418,601 JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO MGI:2152589 (PMID:11593033) RGD PMID:11593033 NCBI chr10:13,573,779...13,621,138 JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within ISO MGI:2183225 (PMID:14745966) RGD PMID:14745966 NCBI chr17:12,124,749...12,300,044 JBrowse link
G Sox5 SRY-box transcription factor 5 involved_in ISS
ISO
GO_REF:0000024
(PMID:11702786), (PMID:14993235)
UniProt
RGD
PMID:11702786 PMID:14993235 GO_REF:0000024 NCBI chr 4:178,512,272...179,467,686 JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:11702786), (PMID:14993235)
UniProt
RGD
PMID:11702786 PMID:14993235 GO_REF:0000024 NCBI chr 1:169,723,306...170,334,846 JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2158693|MGI:2385468 (PMID:10319868), (PMID:12414734)
UniProt
RGD
PMID:10319868 PMID:12414734 GO_REF:0000024 NCBI chr10:98,305,744...98,311,250 JBrowse link
G Sulf1 sulfatase 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:6,362,894...6,526,174 JBrowse link
G Tgfb2 transforming growth factor, beta 2 acts_upstream_of_or_within ISO MGI:95518|MGI:95520 (PMID:8565825) RGD PMID:8565825 NCBI chr13:98,160,075...98,261,771 JBrowse link
G Thra thyroid hormone receptor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1860442 (PMID:9250685)
Ensembl
RGD
PMID:9250685 GO_REF:0000107 NCBI chr10:84,198,141...84,225,659 JBrowse link
G Uncx UNC homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1859373|MGI:1928812 (PMID:10804168), (PMID:10804169)
Ensembl
RGD
PMID:10804168 PMID:10804169 GO_REF:0000107 NCBI chr12:15,092,779...15,097,300 JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:17202865) RGD PMID:17202865 NCBI chr 4:123,863,108...123,908,981 JBrowse link
cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856097 (PMID:8895222) RGD PMID:8895222 NCBI chr  X:75,159,635...75,267,094 JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO MGI:3767672 (PMID:19195025) RGD PMID:19195025 NCBI chr 1:202,184,812...202,204,118 JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (PMID:19195025) RGD PMID:19195025 NCBI chr19:10,909,653...10,944,998 JBrowse link
G Bmp3 bone morphogenetic protein 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:10,712,489...10,737,153 JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Bmp6 bone morphogenetic protein 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:26,523,704...26,785,558 JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2158390|MGI:3577961 (PMID:15492776) RGD PMID:15492776 NCBI chr16:9,740,751...9,786,861 JBrowse link
G Cd44 CD44 molecule involved_in ISO
IEA
(PMID:11944887)
GO_REF:0000107
RGD
Ensembl
PMID:11944887 GO_REF:0000107 NCBI chr 3:109,610,824...109,699,776 JBrowse link
G Cfh complement factor H acts_upstream_of_or_within ISO (PMID:19828624) RGD PMID:19828624 NCBI chr13:51,512,376...51,613,829 JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within ISO MGI:3768254 (PMID:16079159) RGD PMID:16079159 NCBI chr 7:20,524,535...20,743,008 JBrowse link
G Chsy1 chondroitin sulfate synthase 1 acts_upstream_of_or_within ISO MGI:5007063 (PMID:22280990) RGD PMID:22280990 NCBI chr 1:119,689,626...119,750,711 JBrowse link
G Cnmd chondromodulin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:55,041,548...55,066,297 JBrowse link
G Col10a1 collagen type X alpha 1 chain IMP RGD PMID:10853827 RGD:704421 NCBI chr20:38,183,103...38,189,488 JBrowse link
G Col11a1 collagen type XI alpha 1 chain acts_upstream_of_or_within ISO MGI:1856399 (PMID:4100752), (PMID:4110409), (PMID:7859283), (PMID:886247) RGD PMID:886247 PMID:4100752 PMID:4110409 PMID:7859283 MGI:60257 NCBI chr 2:201,820,715...202,013,853 JBrowse link
G Col11a2 collagen type XI alpha 2 chain involved_in ISO
IBA
(PMID:9188673)
GO_REF:0000033
RGD
GO_Central
PMID:9188673 GO_REF:0000033 NCBI chr20:4,786,932...4,816,598 JBrowse link
G Col2a1 collagen type II alpha 1 chain acts_upstream_of_or_within IEP
ISO
MGI:1857275|MGI:2152978 (PMID:10100048), (PMID:11171689), (PMID:11680679), (PMID:7276808), (PMID:7590256), (PMID:9061443), (PMID:9165353), (PMID:9832566) RGD PMID:7276808 PMID:7590256 PMID:9061443 PMID:9165353 PMID:9832566 More... RGD:70694 NCBI chr 7:130,977,561...131,006,627 JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO MGI:1857431 (PMID:31655293) RGD PMID:31655293 NCBI chr 9:54,866,646...54,902,578 JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO MGI:2153356 (PMID:19248115), (PMID:22448243) RGD PMID:19248115 PMID:22448243 NCBI chr20:11,905,690...11,924,111 JBrowse link
G Col9a1 collagen type IX alpha 1 chain acts_upstream_of_or_within ISO MGI:2152964|MGI:88469 (PMID:11680679), (PMID:18191556) RGD PMID:11680679 PMID:18191556 NCBI chr 9:26,585,034...26,668,222 JBrowse link
G Comp cartilage oligomeric matrix protein acts_upstream_of_or_within ISO MGI:3758741|MGI:5550566|MGI:88465 (PMID:17588960), (PMID:18191556), (PMID:23951406) RGD PMID:17588960 PMID:18191556 PMID:23951406 NCBI chr16:19,047,206...19,055,584 JBrowse link
G Cr2 complement C3d receptor 2 acts_upstream_of_or_within ISO (PMID:19828624) RGD PMID:19828624 NCBI chr13:109,207,034...109,244,980 JBrowse link
G Creb3l2 cAMP responsive element binding protein 3-like 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:19767744)
UniProt
RGD
PMID:19767744 GO_REF:0000024 NCBI chr 4:66,874,623...66,990,962 JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 acts_upstream_of_or_within ISO MGI:4868209 (PMID:20812917) RGD PMID:20812917 NCBI chr16:20,995,210...21,330,586 JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO
IBA
(PMID:28263186)
GO_REF:0000033
RGD
GO_Central
PMID:28263186 GO_REF:0000033 NCBI chr 3:117,861,916...117,882,680 JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3589208 (PMID:21098571) RGD PMID:21098571 NCBI chr 6:123,627,529...123,692,278 JBrowse link
G Dlx2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857828 (PMID:7590232)
Ensembl
RGD
PMID:7590232 GO_REF:0000107 NCBI chr 3:56,370,238...56,373,581 JBrowse link
G Dspp dentin sialophosphoprotein IEP femoral head RGD PMID:20679519 RGD:12914771 NCBI chr14:5,870,232...5,876,339 JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within ISO MGI:1857637 (PMID:8152482) RGD PMID:8152482 NCBI chr17:22,660,799...22,666,687 JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:2385534|MGI:6402836 (PMID:15625282), (PMID:24770645), (PMID:25260930) RGD PMID:15625282 PMID:24770645 PMID:25260930 NCBI chr 1:22,518,051...22,583,044 JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5575860 (PMID:24550287)
Ensembl
RGD
PMID:24550287 GO_REF:0000107 NCBI chr 5:166,606,841...166,620,124 JBrowse link
G Esrra estrogen related receptor, alpha IMP RGD PMID:17170100 RGD:1625657 NCBI chr 1:204,104,100...204,114,182 JBrowse link
G Evc EvC ciliary complex subunit 1 IEP RGD PMID:15278943 RGD:1598913 NCBI chr14:77,680,901...77,722,608 JBrowse link
G Fbxw4 F-box and WD repeat domain containing 4 acts_upstream_of_or_within ISO MGI:1857833 (PMID:9733575) RGD PMID:9733575 NCBI chr 1:254,375,921...254,465,173 JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521 (PMID:15781473) RGD PMID:15781473 NCBI chr14:81,211,800...81,227,215 JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:15509771) RGD PMID:15509771 NCBI chr 6:30,017,952...30,039,269 JBrowse link
G Gata3 GATA binding protein 3 involved_in ISO (PMID:29247144) RGD PMID:29247144 NCBI chr17:68,643,760...68,666,000 JBrowse link
G Gnas GNAS complex locus involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3043361 (PMID:15797856)
Ensembl
RGD
PMID:15797856 GO_REF:0000107 NCBI chr 3:183,489,648...183,554,570 JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISS
ISO
GO_REF:0000024
(PMID:17093926)
UniProt
RGD
PMID:17093926 GO_REF:0000024 NCBI chr 5:170,804,511...170,807,988 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within ISO MGI:2386649|MGI:2386679 (PMID:11691837) RGD PMID:11691837 NCBI chr 6:98,357,788...98,405,068 JBrowse link
G Hoxa3 homeobox A3 acts_upstream_of_or_within ISO MGI:96184|MGI:96207 (PMID:9441667) RGD PMID:9441667 NCBI chr 4:81,269,243...81,313,218 JBrowse link
G Hoxb3 homeo box B3 acts_upstream_of_or_within ISO MGI:96175|MGI:96207 (PMID:9441667) RGD PMID:9441667 NCBI chr10:81,258,739...81,314,134 JBrowse link
G Hoxc4 homeo box C4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857570 (PMID:8626021)
Ensembl
RGD
PMID:8626021 GO_REF:0000107 NCBI chr 7:134,135,279...134,173,133 JBrowse link
G Hoxc6 homeo box C6 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:134,138,017...134,148,899 JBrowse link
G Hoxd3 homeo box D3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:96175|MGI:96184 (PMID:9441667)
Ensembl
RGD
PMID:9441667 GO_REF:0000107 NCBI chr 3:59,638,708...59,650,282 JBrowse link
G Hyal1 hyaluronidase 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:11944887)
UniProt
Ensembl
RGD
PMID:11944887 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:108,250,668...108,254,519 JBrowse link
G Hyal2 hyaluronidase 2 involved_in ISO
IEA
ISS
(PMID:11944887)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:11944887 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:108,241,895...108,246,853 JBrowse link
G Hyal3 hyaluronidase 3 involved_in ISO
IEA
(PMID:11944887)
GO_REF:0000107
RGD
Ensembl
PMID:11944887 GO_REF:0000107 NCBI chr 8:108,254,385...108,260,020 JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within ISO (PMID:32227389) RGD PMID:32227389 NCBI chr 2:155,455,773...155,550,082 JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISO (PMID:17889828)
MGI:1934258 (PMID:17191253)
RGD PMID:17191253 PMID:17889828 NCBI chr 9:76,504,315...76,510,532 JBrowse link
G Il17f interleukin 17F involved_in IEA
ISO
GO_REF:0000107
(PMID:11574464)
Ensembl
RGD
PMID:11574464 GO_REF:0000107 NCBI chr 9:23,190,094...23,201,482 JBrowse link
G Itgb8 integrin subunit beta 8 involved_in ISO (PMID:24312400) RGD PMID:24312400 NCBI chr 6:146,267,982...146,351,245 JBrowse link
G Lum lumican IEP RGD PMID:19746167 RGD:2317685 NCBI chr 7:34,245,323...34,252,510 JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:17644814) RGD PMID:17644814 NCBI chr 1:190,797,189...190,803,411 JBrowse link
G Matn3 matrilin 3 acts_upstream_of_or_within ISO MGI:3759029 (PMID:23951406) RGD PMID:23951406 NCBI chr 6:31,748,517...31,768,564 JBrowse link
G Mgp matrix Gla protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:171,497,472...171,500,888 JBrowse link
G Mir140 microRNA 140 acts_upstream_of_or_within ISO MGI:4461000 (PMID:20466812) RGD PMID:20466812 NCBI chr19:52,375,293...52,375,391 JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444 (PMID:19195025) RGD PMID:19195025 NCBI chr 3:144,654,563...144,672,831 JBrowse link
G Msx1 msh homeobox 1 IMP RGD PMID:10332146 RGD:1600462 NCBI chr14:77,185,802...77,189,735 JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IMP
ISO
MGI:1926381 (PMID:10742104), (PMID:11668602) RGD PMID:10742104 PMID:11668602 PMID:10332146 RGD:1600462 NCBI chr17:11,097,214...11,102,879 JBrowse link
G Nfatc2 nuclear factor of activated T-cells 2 involved_in ISO (PMID:35789258)
(PMID:10620601)
RGD PMID:10620601 PMID:35789258 NCBI chr 3:177,615,189...177,747,493 JBrowse link
G Nfia nuclear factor I/A involved_in IEA
ISO
GO_REF:0000107
MGI:2449024 (PMID:29247144)
Ensembl
RGD
PMID:29247144 GO_REF:0000107 NCBI chr 5:112,436,655...112,781,878 JBrowse link
G Nog noggin involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000104
(PMID:10684250)
UniProt
RGD
PMID:10684250 GO_REF:0000104 NCBI chr10:74,625,874...74,627,501 JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in ISO MGI:1856702|MGI:3774275 (PMID:15722353), (PMID:17728275) RGD PMID:15722353 PMID:17728275 NCBI chr 5:62,678,197...62,697,360 JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr13:50,865,253...50,985,107 JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO MGI:1857831 (PMID:8631261) RGD PMID:8631261 NCBI chr 5:151,996,368...152,098,023 JBrowse link
G Pitx1 paired-like homeodomain 1 acts_upstream_of_or_within ISO MGI:1857659 (PMID:10101115) RGD PMID:10101115 NCBI chr17:8,794,134...8,800,292 JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr10:13,573,779...13,621,138 JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within ISO MGI:1857640|MGI:98218 (PMID:7758948), (PMID:9876178) RGD PMID:7758948 PMID:9876178 NCBI chr13:78,136,783...78,205,379 JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within ISO MGI:97712 (PMID:9876178) RGD PMID:9876178 NCBI chr 3:14,132,574...14,168,533 JBrowse link
G Satb2 SATB homeobox 2 acts_upstream_of_or_within ISO MGI:3692768 (PMID:16751105) RGD PMID:16751105 NCBI chr 9:58,348,027...58,534,256 JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:3810257 (PMID:18729207) RGD PMID:18729207 NCBI chr 2:169,089,517...169,097,064 JBrowse link
G Smad1 SMAD family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1328787|MGI:1859993 (PMID:19224984)
Ensembl
RGD
PMID:19224984 GO_REF:0000107 NCBI chr19:45,417,430...45,477,962 JBrowse link
G Smad5 SMAD family member 5 acts_upstream_of_or_within ISO MGI:109452|MGI:1859993 (PMID:19224984) RGD PMID:19224984 NCBI chr17:7,862,332...7,891,678 JBrowse link
G Smad9 SMAD family member 9 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:109452|MGI:1328787 (PMID:19224984)
Ensembl
RGD
PMID:19224984 GO_REF:0000107 NCBI chr 2:138,956,326...139,006,315 JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 acts_upstream_of_or_within ISO MGI:3575405 (PMID:17591962), (PMID:27325675) RGD PMID:17591962 PMID:27325675 NCBI chr19:34,162,337...34,245,786 JBrowse link
G Snorc secondary ossification center associated regulator of chondrocyte maturation involved_in ISO (PMID:28323137) RGD PMID:28323137 NCBI chr 9:95,574,943...95,593,394 JBrowse link
G Sox5 SRY-box transcription factor 5 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:15529345), (PMID:26150426)
MGI:98368 (PMID:15634692)
UniProt
RGD
PMID:15529345 PMID:15634692 PMID:26150426 GO_REF:0000024 NCBI chr 4:178,512,272...179,467,686 JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:15529345), (PMID:26150426)
MGI:98367 (PMID:15634692)
UniProt
RGD
PMID:15529345 PMID:15634692 PMID:26150426 GO_REF:0000024 NCBI chr 1:169,723,306...170,334,846 JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
TAS
ISO
NAS
ISS
IEP
(PMID:15529345), (PMID:28263186)
MGI:2158693 (PMID:11371614)
(PMID:19047045)
PMID:19828133
GO_REF:0000024
RGD
UniProt
PMID:11371614 PMID:15529345 PMID:19047045 PMID:28263186 PMID:11514554 More... GO_REF:0000024, RGD:70568, RGD:8553796, RGD:1599098 NCBI chr10:98,305,744...98,311,250 JBrowse link
G Sulf1 sulfatase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20479257)
UniProt
RGD
PMID:20479257 GO_REF:0000024 NCBI chr 5:6,362,894...6,526,174 JBrowse link
G Sulf2 sulfatase 2 involved_in ISO (PMID:20479257) RGD PMID:20479257 NCBI chr 3:154,822,079...154,904,566 JBrowse link
G Tapt1 transmembrane anterior posterior transformation 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:71,085,966...71,132,228 JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in ISO (PMID:18498113) RGD PMID:18498113 NCBI chr 8:124,672,677...124,761,741 JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 IEP RGD PMID:16208432 RGD:8694091 NCBI chr  X:3,766,509...3,772,578 JBrowse link
G Trip11 thyroid hormone receptor interactor 11 involved_in ISO (PMID:30728324) RGD PMID:30728324 NCBI chr 6:120,995,242...121,067,693 JBrowse link
G Tyms thymidylate synthetase IEP RGD PMID:3471366 RGD:2317423 NCBI chr 9:120,760,057...120,776,149 JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:3,702,300...3,724,860 JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:16826533) RGD PMID:16826533 NCBI chr 4:123,863,108...123,908,981 JBrowse link
G Wnt9a Wnt family member 9A acts_upstream_of ISO (PMID:19047045) RGD PMID:19047045 NCBI chr10:44,094,140...44,121,134 JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in ISS
ISO
GO_REF:0000024
(PMID:21547890)
UniProt
RGD
PMID:21547890 GO_REF:0000024 NCBI chr 8:57,885,886...58,073,507 JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857799 (PMID:9389660)
Ensembl
RGD
PMID:9389660 GO_REF:0000107 NCBI chr17:56,644,397...56,811,155 JBrowse link
cartilage development involved in endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase acts_upstream_of_or_within ISO MGI:1857139 (PMID:15622513) RGD PMID:15622513 NCBI chr20:9,708,089...9,732,623 JBrowse link
G Col1a1 collagen type I alpha 1 chain acts_upstream_of_or_within ISO MGI:3769585 (PMID:18248096) RGD PMID:18248096 NCBI chr10:80,380,458...80,397,461 JBrowse link
G Col2a1 collagen type II alpha 1 chain acts_upstream_of_or_within
involved_in
IEP
ISO
IEA
mandibular condylar cartilage
MGI:1857275|MGI:2152978 (PMID:11680679), (PMID:8989518), (PMID:9022054)
GO_REF:0000107
RGD
Ensembl
PMID:8989518 PMID:9022054 PMID:11680679 PMID:12924823 GO_REF:0000107, RGD:8661659 NCBI chr 7:130,977,561...131,006,627 JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:21185280), (PMID:23958822) RGD PMID:21185280 PMID:23958822 NCBI chr 7:86,265,651...86,544,488 JBrowse link
G Ghr growth hormone receptor IEP RGD PMID:15749813 RGD:2307373 NCBI chr 2:52,541,452...52,804,960 JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO MGI:96203 (PMID:14668414) RGD PMID:14668414 NCBI chr 4:81,342,527...81,346,189 JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172 (PMID:14668414) RGD PMID:14668414 NCBI chr 3:59,584,840...59,587,257 JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO MGI:1934891 (PMID:10545953) RGD PMID:10545953 NCBI chr 5:154,960,818...155,061,971 JBrowse link
G Shox2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3628798 (PMID:16537395)
Ensembl
RGD
PMID:16537395 GO_REF:0000107 NCBI chr 2:153,524,324...153,537,571 JBrowse link
G Sik3 SIK family kinase 3 acts_upstream_of_or_within ISO MGI:5317918 (PMID:22318228) RGD PMID:22318228 NCBI chr 8:55,208,969...55,419,138 JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 involved_in ISO (PMID:26249260) RGD PMID:26249260 NCBI chr12:47,599,161...47,638,143 JBrowse link
cartilage morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO MGI:103580 (PMID:17764670) RGD PMID:17764670 NCBI chr10:42,006,646...42,009,213 JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:103577 (PMID:17764670)
Ensembl
RGD
PMID:17764670 GO_REF:0000107 NCBI chr16:37,928,145...37,931,488 JBrowse link
G Hoxa5 homeo box A5 acts_upstream_of_or_within ISO MGI:2150397 (PMID:9441679) RGD PMID:9441679 NCBI chr 4:81,302,341...81,306,234 JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO MGI:3603182 (PMID:17420000) RGD PMID:17420000 NCBI chr 2:15,708,732...15,871,639 JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:1933766 (PMID:12489152) RGD PMID:12489152 NCBI chr14:77,185,802...77,189,735 JBrowse link
G Snai1 snail family transcriptional repressor 1 acts_upstream_of_or_within ISO MGI:1096393 (PMID:17376812) RGD PMID:17376812 NCBI chr 3:176,667,476...176,671,965 JBrowse link
G Snai2 snail family transcriptional repressor 2 acts_upstream_of_or_within ISO MGI:98330 (PMID:17376812) RGD PMID:17376812 NCBI chr11:99,686,934...99,690,349 JBrowse link
chondroblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan IEP RGD PMID:20001227 RGD:2315747 NCBI chr 1:142,390,951...142,453,779 JBrowse link
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within ISO (PMID:9441684) RGD PMID:9441684 NCBI chr 2:234,562,410...234,565,370 JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISO (PMID:17167778) RGD PMID:17167778 NCBI chr 2:122,164,454...122,218,796 JBrowse link
G Fgf4 fibroblast growth factor 4 involved_in ISO (PMID:17167778) RGD PMID:17167778 NCBI chr 1:200,023,937...200,027,793 JBrowse link
G Gdf5 growth differentiation factor 5 involved_in ISO (PMID:25092592) RGD PMID:25092592 NCBI chr 3:144,454,316...144,458,508 JBrowse link
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within ISO (PMID:10684250) RGD PMID:10684250 NCBI chr10:83,883,490...83,928,932 JBrowse link
chondrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856465 (PMID:9664687)
Ensembl
RGD
PMID:9664687 GO_REF:0000107 NCBI chr 1:142,390,951...142,453,779 JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in ISO (PMID:9442116) RGD PMID:9442116 NCBI chr 9:68,685,942...68,801,353 JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 acts_upstream_of_or_within ISO MGI:3806990 (PMID:18539921) RGD PMID:18539921 NCBI chr 5:17,775,684...17,802,570 JBrowse link
G Chst11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3768254 (PMID:16079159)
Ensembl
RGD
PMID:16079159 GO_REF:0000107 NCBI chr 7:20,524,535...20,743,008 JBrowse link
G Chsy1 chondroitin sulfate synthase 1 acts_upstream_of_or_within ISO MGI:5007063 (PMID:22280990) RGD PMID:22280990 NCBI chr 1:119,689,626...119,750,711 JBrowse link
G Col11a1 collagen type XI alpha 1 chain acts_upstream_of_or_within ISO MGI:1856399 (PMID:4100752) RGD PMID:4100752 NCBI chr 2:201,820,715...202,013,853 JBrowse link
G Comp cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3758741|MGI:5550566 (PMID:17588960), (PMID:22006726)
Ensembl
RGD
PMID:17588960 PMID:22006726 GO_REF:0000107 NCBI chr16:19,047,206...19,055,584 JBrowse link
G Ecm1 extracellular matrix protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:20138147)
Ensembl
RGD
PMID:20138147 GO_REF:0000107 NCBI chr 2:183,287,491...183,292,729 JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 acts_upstream_of_or_within ISO MGI:2183829 (PMID:12865332) RGD PMID:12865332 NCBI chr 4:104,363,838...104,425,271 JBrowse link
G Fgf18 fibroblast growth factor 18 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2178751 (PMID:17014841)
Ensembl
RGD
PMID:17014841 GO_REF:0000107 NCBI chr10:17,706,011...17,737,702 JBrowse link
G Galnt3 polypeptide N-acetylgalactosaminyltransferase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25107907)
GO_REF:0000107
RGD
Ensembl
PMID:25107907 GO_REF:0000107 NCBI chr 3:71,150,559...71,187,321 JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of ISO MGI:96203 (PMID:14668414) RGD PMID:14668414 NCBI chr 4:81,342,527...81,346,189 JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of ISO MGI:96172 (PMID:14668414) RGD PMID:14668414 NCBI chr 3:59,584,840...59,587,257 JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 acts_upstream_of_or_within ISO MGI:5007248 (PMID:21606205) RGD PMID:21606205 NCBI chr13:94,970,421...95,012,071 JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926381 (PMID:10742104)
Ensembl
RGD
PMID:10742104 GO_REF:0000107 NCBI chr17:11,097,214...11,102,879 JBrowse link
G Rarg retinoic acid receptor, gamma involved_in ISO (PMID:19389355) RGD PMID:19389355 NCBI chr 7:133,367,833...133,390,301 JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176466 (PMID:10213384)
Ensembl
RGD
PMID:10213384 GO_REF:0000107 NCBI chr 9:23,661,278...23,990,248 JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:3810257 (PMID:18729207) RGD PMID:18729207 NCBI chr 2:169,089,517...169,097,064 JBrowse link
G Shox2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3605739 (PMID:17481601)
Ensembl
RGD
PMID:17481601 GO_REF:0000107 NCBI chr 2:153,524,324...153,537,571 JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 acts_upstream_of_or_within ISO MGI:3575405 (PMID:17591962), (PMID:24505141) RGD PMID:17591962 PMID:24505141 NCBI chr19:34,162,337...34,245,786 JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:18415932) RGD PMID:18415932 NCBI chr10:98,305,744...98,311,250 JBrowse link
G Sulf1 sulfatase 1 involved_in IEA
ISO
ISS
GO_REF:0000104
(PMID:20479257)
GO_REF:0000024
UniProt
RGD
PMID:20479257 GO_REF:0000024 GO_REF:0000104 NCBI chr 5:6,362,894...6,526,174 JBrowse link
G Sulf2 sulfatase 2 involved_in ISO (PMID:20479257) RGD PMID:20479257 NCBI chr 3:154,822,079...154,904,566 JBrowse link
chondrocyte development involved in endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpinh1 serpin family H member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2176070|MGI:5505265 (PMID:22492985)
GO_REF:0000107
RGD
Ensembl
PMID:22492985 GO_REF:0000107 NCBI chr 1:153,643,500...153,650,853 JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856877 (PMID:21788370)
Ensembl
RGD
PMID:21788370 GO_REF:0000107 NCBI chr19:34,162,337...34,245,786 JBrowse link
chondrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in ISO MGI:1347346 (PMID:29618652) RGD PMID:29618652 NCBI chr 2:60,032,873...60,327,629 JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 involved_in ISO MGI:2146046 (PMID:29618652) RGD PMID:29618652 NCBI chr 8:90,704,727...90,744,333 JBrowse link
G Arid5a AT-rich interaction domain 5A acts_upstream_of_or_within ISO (PMID:21346191) RGD PMID:21346191 NCBI chr 9:38,534,612...38,549,467 JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:16194878)
Ensembl
RGD
PMID:16194878 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416 JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of
ISS
ISO
IEA
GO_REF:0000024
(PMID:20059955)
(PMID:17481601)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17481601 PMID:20059955 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in ISO (PMID:24098149) RGD PMID:24098149 NCBI chr16:9,740,751...9,786,861 JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B acts_upstream_of_or_within
involved_in
ISO MGI:1927616|MGI:95688 (PMID:18363966)
(PMID:24098149)
RGD PMID:18363966 PMID:24098149 NCBI chr 2:233,211,525...233,544,344 JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within ISO (PMID:15305294) RGD PMID:15305294 NCBI chr 1:22,621,498...22,624,614 JBrowse link
G Ccn3 cellular communication network factor 3 involved_in ISO
IBA
ISS
IMP
(PMID:21871891)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:21871891 PMID:21871891 GO_REF:0000024 GO_REF:0000033, RGD:10400852 NCBI chr 7:87,983,788...87,990,810 JBrowse link
G Chrdl2 chordin-like 2 acts_upstream_of_or_within ISO (PMID:14660436) RGD PMID:14660436 NCBI chr 1:154,343,201...154,370,651 JBrowse link
G Col11a2 collagen type XI alpha 2 chain acts_upstream_of_or_within ISO MGI:2154689 (PMID:11668593) RGD PMID:11668593 NCBI chr20:4,786,932...4,816,598 JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within
IEP
ISO
IEA
(PMID:9119111)
MGI:2152978 (PMID:11680679), (PMID:7590256)
GO_REF:0000107
RGD
Ensembl
PMID:7590256 PMID:9119111 PMID:11680679 PMID:21627568 GO_REF:0000107, RGD:5134342 NCBI chr 7:130,977,561...131,006,627 JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO MGI:1857431 (PMID:31655293) RGD PMID:31655293 NCBI chr 9:54,866,646...54,902,578 JBrowse link
G Col9a1 collagen type IX alpha 1 chain IEP RGD PMID:8992886 RGD:1600950 NCBI chr 9:26,585,034...26,668,222 JBrowse link
G Creb3l2 cAMP responsive element binding protein 3-like 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:19767744)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19767744 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:66,874,623...66,990,962 JBrowse link
G Cst5 cystatin D acts_upstream_of_or_within ISO (PMID:13679380) RGD PMID:13679380 NCBI chr 3:137,573,194...137,577,754 JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:2148591|MGI:2148594|MGI:2446084|MGI:2450929 (PMID:15866163), (PMID:16818445)
Ensembl
RGD
PMID:15866163 PMID:16818445 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661 JBrowse link
G Cytl1 cytokine like 1 acts_upstream_of_or_within ISO (PMID:17644814) RGD PMID:17644814 NCBI chr14:73,053,876...73,058,886 JBrowse link
G Dll4 delta like canonical Notch ligand 4 IEP RGD PMID:26872979 RGD:11521858 NCBI chr 3:126,770,945...126,780,769 JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:20080592), (PMID:20404326), (PMID:23458899), (PMID:28768899) RGD PMID:20080592 PMID:20404326 PMID:23458899 PMID:28768899 NCBI chr 7:86,265,651...86,544,488 JBrowse link
G Ext2 exostosin glycosyltransferase 2 acts_upstream_of_or_within ISO MGI:3608690 (PMID:16236767) RGD PMID:16236767 NCBI chr 3:100,120,776...100,253,424 JBrowse link
G Fgf18 fibroblast growth factor 18 acts_upstream_of ISO MGI:95524 (PMID:15781473) RGD PMID:15781473 NCBI chr10:17,706,011...17,737,702 JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within ISO MGI:2135961|MGI:95522 (PMID:17544391) RGD PMID:17544391 NCBI chr15:32,208,993...32,254,952 JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:104723 (PMID:17544391) RGD PMID:17544391 NCBI chr16:73,194,631...73,249,855 JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:15509771)
Ensembl
RGD
PMID:15509771 GO_REF:0000107 NCBI chr 6:30,017,952...30,039,269 JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of ISO (PMID:9885252) RGD PMID:9885252 NCBI chr 3:144,454,316...144,458,508 JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1915509 (PMID:23333501) RGD PMID:23333501 NCBI chr13:29,946,882...30,163,589 JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of ISO MGI:96533 (PMID:16284117) RGD PMID:16284117 NCBI chr17:54,134,064...54,405,198 JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in ISS
ISO
GO_REF:0000024
(PMID:15946906)
UniProt
RGD
PMID:15946906 GO_REF:0000024 NCBI chr17:40,084,427...40,132,035 JBrowse link
G Hes5 hes family bHLH transcription factor 5 NOT|involved_in ISS
ISO
GO_REF:0000024
(PMID:17093926)
UniProt
RGD
PMID:17093926 GO_REF:0000024 NCBI chr 5:170,804,511...170,807,988 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2386679 (PMID:15073147)
Ensembl
RGD
PMID:15073147 GO_REF:0000107 NCBI chr 6:98,357,788...98,405,068 JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO
ISS
(PMID:21484705)
GO_REF:0000024
RGD
UniProt
PMID:21484705 GO_REF:0000024 NCBI chr 7:57,762,710...57,884,555 JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of ISO MGI:96203 (PMID:14668414) RGD PMID:14668414 NCBI chr 4:81,342,527...81,346,189 JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of ISO MGI:96172 (PMID:14668414) RGD PMID:14668414 NCBI chr 3:59,584,840...59,587,257 JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO MGI:1934891 (PMID:10545953) RGD PMID:10545953 NCBI chr 5:154,960,818...155,061,971 JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within ISO MGI:95728 (PMID:23333501) RGD PMID:23333501 NCBI chr 2:155,455,773...155,550,082 JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of
acts_upstream_of_or_within
ISO MGI:1934258 (PMID:16284117)
(PMID:15951842)
RGD PMID:15951842 PMID:16284117 NCBI chr 9:76,504,315...76,510,532 JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 acts_upstream_of ISO MGI:2180017 (PMID:11790802) RGD PMID:11790802 NCBI chr 1:203,029,412...203,045,975 JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:17202865)
(PMID:17644814)
Ensembl
RGD
PMID:17202865 PMID:17644814 GO_REF:0000107 NCBI chr20:6,751,288...6,812,294 JBrowse link
G Matn1 matrilin 1 acts_upstream_of_or_within ISO MGI:2153042|MGI:3663272 (PMID:16877353) RGD PMID:16877353 NCBI chr 5:143,117,198...143,127,140 JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO MGI:99533 (PMID:17336904) RGD PMID:17336904 NCBI chr 2:15,708,732...15,871,639 JBrowse link
G Mef2d myocyte enhancer factor 2D involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:99458 (PMID:17336904)
Ensembl
RGD
PMID:17336904 GO_REF:0000107 NCBI chr 2:173,606,054...173,635,620 JBrowse link
G Mustn1 musculoskeletal, embryonic nuclear protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:6,072,908...6,075,161 JBrowse link
G Nfib nuclear factor I/B involved_in ISS
ISO
GO_REF:0000024
(PMID:17904922)
UniProt
RGD
PMID:17904922 GO_REF:0000024 NCBI chr 5:101,805,168...102,020,618 JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IEA
ISO
GO_REF:0000107
MGI:3774275 (PMID:17728275)
Ensembl
RGD
PMID:17728275 GO_REF:0000107 NCBI chr 5:62,678,197...62,697,360 JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO UniProtKB:Q91ZD1 (PMID:21262216) RGD PMID:21262216 NCBI chr 6:32,369,561...32,380,822 JBrowse link
G Osr2 odd-skipped related transcription factor 2 involved_in ISO UniProtKB:Q9WVG7 (PMID:21262216) RGD PMID:21262216 NCBI chr 7:66,487,841...66,495,003 JBrowse link
G Prkca protein kinase C, alpha acts_upstream_of_or_within ISO (PMID:17644814) RGD PMID:17644814 NCBI chr10:93,388,991...93,787,617 JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2154519|MGI:99829 (PMID:16476422), (PMID:9832460)
Ensembl
RGD
PMID:9832460 PMID:16476422 GO_REF:0000107 NCBI chr 8:119,572,295...119,597,405 JBrowse link
G Pthlh parathyroid hormone-like hormone acts_upstream_of ISO MGI:2154515 (PMID:8895385) RGD PMID:8895385 NCBI chr 4:180,188,792...180,199,847 JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:18638549)
Ensembl
RGD
PMID:18638549 GO_REF:0000107 NCBI chr15:54,780,858...54,911,989 JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within ISO MGI:2183225 (PMID:14745966) RGD PMID:14745966 NCBI chr17:12,124,749...12,300,044 JBrowse link
G Runx1 RUNX family transcription factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:45,325,778...45,560,300 JBrowse link
G Runx2 RUNX family transcription factor 2 acts_upstream_of
acts_upstream_of_or_within
ISO MGI:2176465 (PMID:10072783)
MGI:102672|MGI:2176466|MGI:97801 (PMID:16476422), (PMID:22916278)
RGD PMID:10072783 PMID:16476422 PMID:22916278 NCBI chr 9:23,661,278...23,990,248 JBrowse link
G Runx3 RUNX family transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:99829 (PMID:22916278)
GO_REF:0000033
RGD
GO_Central
PMID:22916278 GO_REF:0000033 NCBI chr 5:152,644,270...152,702,835 JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (PMID:20059955) RGD PMID:20059955 NCBI chr 7:108,176,608...108,178,626 JBrowse link
G Shox2 SHOX homeobox 2 acts_upstream_of_or_within ISO (PMID:22916278) RGD PMID:22916278 NCBI chr 2:153,524,324...153,537,571 JBrowse link
G Six2 SIX homeobox 2 acts_upstream_of_or_within ISO MGI:3691857 (PMID:20515681) RGD PMID:20515681 NCBI chr 6:8,974,859...8,981,345 JBrowse link
G Slc26a2 solute carrier family 26 member 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:24302720)
UniProt
RGD
PMID:24302720 GO_REF:0000024 NCBI chr18:54,648,276...54,666,627 JBrowse link
G Slc39a14 solute carrier family 39 member 14 acts_upstream_of ISO (PMID:21445361) RGD PMID:21445361 NCBI chr15:51,786,517...51,833,260 JBrowse link
G Snx19 sorting nexin 19 involved_in
acts_upstream_of_or_within
ISO (PMID:19877062) RGD PMID:19877062 NCBI chr 8:28,829,881...28,867,600 JBrowse link
G Sox5 SRY-box transcription factor 5 involved_in ISS
ISO
GO_REF:0000024
(PMID:11702786), (PMID:14993235)
UniProt
RGD
PMID:11702786 PMID:14993235 GO_REF:0000024 NCBI chr 4:178,512,272...179,467,686 JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:11702786), (PMID:14993235)
UniProt
RGD
PMID:11702786 PMID:14993235 GO_REF:0000024 NCBI chr 1:169,723,306...170,334,846 JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of
acts_upstream_of_or_within
ISS
ISO
IBA
GO_REF:0000024
(PMID:15132997), (PMID:29644115), (PMID:32103177), (PMID:9119111)
MGI:2158693 (PMID:11371614)
MGI:2385468 (PMID:12414734)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:9119111 PMID:11371614 PMID:12414734 PMID:15132997 PMID:29644115 More... GO_REF:0000024 GO_REF:0000033 NCBI chr10:98,305,744...98,311,250 JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:15040835)
UniProt
RGD
PMID:15040835 GO_REF:0000024 NCBI chr 1:90,324,312...90,340,627 JBrowse link
G Tgfbi transforming growth factor, beta induced IEP RGD PMID:16546826 RGD:1599388 NCBI chr17:7,960,885...7,990,234 JBrowse link
G Trps1 transcriptional repressor GATA binding 1 acts_upstream_of_or_within ISO MGI:107191|MGI:95688 (PMID:18363966) RGD PMID:18363966 NCBI chr 7:83,806,121...84,032,609 JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 acts_upstream_of_or_within ISO MGI:3044357 (PMID:14681194) RGD PMID:14681194 NCBI chr 9:105,533,116...105,567,460 JBrowse link
G Wnt10b Wnt family member 10B involved_in ISO (PMID:15135146) RGD PMID:15135146 NCBI chr 7:129,922,088...129,927,892 JBrowse link
G Wnt2b Wnt family member 2B involved_in ISO (PMID:15135146) RGD PMID:15135146 NCBI chr 2:195,142,573...195,156,945 JBrowse link
G Wnt5b Wnt family member 5B involved_in ISO (PMID:15135146) RGD PMID:15135146 NCBI chr 4:152,609,566...152,733,790 JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:17202865) RGD PMID:17202865 NCBI chr 4:123,863,108...123,908,981 JBrowse link
G Wnt9a Wnt family member 9A acts_upstream_of ISO MGI:3701350|MGI:88276 (PMID:16818445) RGD PMID:16818445 NCBI chr10:44,094,140...44,121,134 JBrowse link
chondrocyte differentiation involved in endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3579503 (PMID:19623616)
Ensembl
RGD
PMID:19623616 GO_REF:0000107 NCBI chr10:94,393,379...94,426,579 JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:25639508) RGD PMID:25639508 NCBI chr 9:76,504,315...76,510,532 JBrowse link
G Scube2 signal peptide, CUB domain and EGF like domain containing 2 acts_upstream_of_or_within ISO MGI:5698367 (PMID:25639508) RGD PMID:25639508 NCBI chr 1:163,831,876...163,899,925 JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO
ISS
(PMID:20676705)
GO_REF:0000024
RGD
UniProt
PMID:20676705 GO_REF:0000024 NCBI chr10:98,305,744...98,311,250 JBrowse link
G Trip11 thyroid hormone receptor interactor 11 acts_upstream_of_or_within ISO MGI:4829605 (PMID:20089971) RGD PMID:20089971 NCBI chr 6:120,995,242...121,067,693 JBrowse link
chondrocyte hypertrophy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:23958822) RGD PMID:23958822 NCBI chr 7:86,265,651...86,544,488 JBrowse link
G Mex3c mex-3 RNA binding family member C acts_upstream_of_or_within ISO MGI:3764947 (PMID:22357625) RGD PMID:22357625 NCBI chr18:69,442,850...69,463,843 JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISS
ISO
GO_REF:0000024
(PMID:21367821)
UniProt
RGD
PMID:21367821 GO_REF:0000024 NCBI chr10:98,305,744...98,311,250 JBrowse link
coronal suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:3603464 (PMID:19389359) RGD PMID:19389359 NCBI chr 1:194,175,703...194,280,914 JBrowse link
cranial suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:9477322)
Ensembl
RGD
PMID:9477322 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within ISO (PMID:9477322) RGD PMID:9477322 NCBI chr 1:200,023,937...200,027,793 JBrowse link
G Igf1 insulin-like growth factor 1 IEP RGD PMID:10597685 RGD:12910129 NCBI chr 7:24,169,608...24,249,446 JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO MGI:1920249 (PMID:16955138) RGD PMID:16955138 NCBI chr 4:8,049,339...8,057,812 JBrowse link
G Insig2 insulin induced gene 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1916289 (PMID:16955138)
Ensembl
RGD
PMID:16955138 GO_REF:0000107 NCBI chr13:32,472,390...32,500,139 JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in
ISO MGI:1857265|MGI:3038818 (PMID:12221714), (PMID:15030764)
(PMID:16502419)
RGD PMID:12221714 PMID:15030764 PMID:16502419 NCBI chr 6:50,674,910...50,676,904 JBrowse link
craniofacial suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxn3 forkhead box N3 acts_upstream_of_or_within ISO (PMID:20691664) RGD PMID:20691664 NCBI chr 6:118,462,018...118,842,442 JBrowse link
G Frem1 Fras1 related extracellular matrix 1 involved_in ISO (PMID:21931569) RGD PMID:21931569 NCBI chr 5:97,321,266...97,469,523 JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in IEA
ISO
GO_REF:0000107
(PMID:23063620)
Ensembl
RGD
PMID:23063620 GO_REF:0000107 NCBI chr 1:80,902,236...80,951,614 JBrowse link
G Mmp14 matrix metallopeptidase 14 acts_upstream_of_or_within ISO MGI:1276107 (PMID:18022611) RGD PMID:18022611 NCBI chr15:27,887,795...27,897,020 JBrowse link
G Mmp16 matrix metallopeptidase 16 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:101900 (PMID:18022611)
Ensembl
RGD
PMID:18022611 GO_REF:0000107 NCBI chr 5:31,312,280...31,556,276 JBrowse link
G Neurog1 neurogenin 1 involved_in ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,362,878...8,364,397 JBrowse link
G Rab23 RAB23, member RAS oncogene family involved_in ISO (PMID:17503333) RGD PMID:17503333 NCBI chr 9:35,943,522...35,967,367 JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,433,406...8,436,541 JBrowse link
G Tmem107 transmembrane protein 107 acts_upstream_of_or_within ISO MGI:5007367 (PMID:28954202) RGD PMID:28954202 NCBI chr10:54,268,218...54,273,520 JBrowse link
deltoid tuberosity development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:20059955)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20059955 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Pitx2 paired-like homeodomain 2 involved_in ISO (PMID:18312615) RGD PMID:18312615 NCBI chr 2:220,391,417...220,411,588 JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (PMID:17567668), (PMID:20059955) RGD PMID:17567668 PMID:20059955 NCBI chr 7:108,176,608...108,178,626 JBrowse link
embryonic cranial skeleton morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857137 (PMID:9268572)
Ensembl
RGD
PMID:9268572 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Cdh11 cadherin 11 acts_upstream_of_or_within ISO MGI:3526861 (PMID:17143286) RGD PMID:17143286 NCBI chr19:2,148,447...2,305,754 JBrowse link
G Dlx2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857828 (PMID:7590232)
Ensembl
RGD
PMID:7590232 GO_REF:0000107 NCBI chr 3:56,370,238...56,373,581 JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISO
ISS
(PMID:24360810)
GO_REF:0000024
RGD
UniProt
PMID:24360810 GO_REF:0000024 NCBI chr10:105,047,567...105,057,561 JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in ISO (PMID:7874170), (PMID:7987400) RGD PMID:7874170 PMID:7987400 NCBI chr 1:194,175,703...194,280,914 JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857865 (PMID:9106663) RGD PMID:9106663 NCBI chr19:66,094,718...66,097,420 JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:2388397|MGI:98297 (PMID:17525797) RGD PMID:17525797 NCBI chr17:4,487,716...4,490,701 JBrowse link
G Gnas GNAS complex locus involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3043361 (PMID:15797856)
Ensembl
RGD
PMID:15797856 GO_REF:0000107 NCBI chr 3:183,489,648...183,554,570 JBrowse link
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO MGI:4942413 (PMID:21377456) RGD PMID:21377456 NCBI chr 7:68,400,287...68,530,269 JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within ISO MGI:4458412 (PMID:23469164) RGD PMID:23469164 NCBI chr10:14,537,134...14,624,926 JBrowse link
G Irx5 iroquois homeobox 5 involved_in ISO (PMID:22581230) RGD PMID:22581230 NCBI chr19:30,812,033...30,816,885 JBrowse link
G Mmp14 matrix metallopeptidase 14 acts_upstream_of_or_within ISO MGI:1276107 (PMID:18022611) RGD PMID:18022611 NCBI chr15:27,887,795...27,897,020 JBrowse link
G Mmp16 matrix metallopeptidase 16 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:101900 (PMID:18022611)
Ensembl
RGD
PMID:18022611 GO_REF:0000107 NCBI chr 5:31,312,280...31,556,276 JBrowse link
G Nipbl NIPBL, cohesin loading factor acts_upstream_of_or_within ISO MGI:4332250 (PMID:19763162) RGD PMID:19763162 NCBI chr 2:57,399,443...57,586,770 JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (PMID:11311163) RGD PMID:11311163 NCBI chr20:29,368,436...29,376,837 JBrowse link
G Pax5 paired box 5 acts_upstream_of_or_within ISO MGI:2386577 (PMID:23349049) RGD PMID:23349049 NCBI chr 5:58,763,334...58,945,719 JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in IEA
ISO
IBA
ISS
GO_REF:0000107
(PMID:9226440)
GO_REF:0000033
GO_REF:0000024
Ensembl
RGD
GO_Central
UniProt
PMID:9226440 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:33,360,027...33,408,604 JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within ISO MGI:1857640|MGI:98218 (PMID:7758948), (PMID:9729491) RGD PMID:7758948 PMID:9729491 NCBI chr13:78,136,783...78,205,379 JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within ISO MGI:97712 (PMID:9729491) RGD PMID:9729491 NCBI chr 3:14,132,574...14,168,533 JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104685|MGI:98872 (PMID:15030764)
Ensembl
RGD
PMID:15030764 GO_REF:0000107 NCBI chr 9:23,661,278...23,990,248 JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:4437211 (PMID:20133625) RGD PMID:20133625 NCBI chr 8:119,390,207...119,475,863 JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:106034 (PMID:20515681) RGD PMID:20515681 NCBI chr 6:97,482,617...97,487,853 JBrowse link
G Six2 SIX homeobox 2 acts_upstream_of_or_within ISO MGI:3691857 (PMID:20515681) RGD PMID:20515681 NCBI chr 6:8,974,859...8,981,345 JBrowse link
G Six4 SIX homeobox 4 acts_upstream_of_or_within ISO MGI:102780 (PMID:20515681) RGD PMID:20515681 NCBI chr 6:91,802,328...91,816,002 JBrowse link
G Slc39a1 solute carrier family 39 member 1 acts_upstream_of_or_within ISO MGI:2147269|MGI:3625131 (PMID:16652366) RGD PMID:16652366 NCBI chr 2:175,703,413...175,709,063 JBrowse link
G Slc39a3 solute carrier family 39 member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1353474 (PMID:16652366)
Ensembl
RGD
PMID:16652366 GO_REF:0000107 NCBI chr 7:8,676,845...8,682,846 JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO MGI:1201674 (PMID:15183723) RGD PMID:15183723 NCBI chr18:72,124,792...72,193,345 JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:108051 (PMID:15183723) RGD PMID:15183723 NCBI chr 8:64,126,829...64,236,960 JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2179191 (PMID:15190012)
UniProt
RGD
PMID:15190012 GO_REF:0000024 NCBI chr11:82,409,275...82,419,058 JBrowse link
G Tbx15 T-box transcription factor 15 acts_upstream_of_or_within ISO MGI:1856015 (PMID:15728667) RGD PMID:15728667 NCBI chr 2:186,576,650...186,687,748 JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:8622766)
MGI:1888387 (PMID:8622765)
UniProt
RGD
PMID:8622765 PMID:8622766 GO_REF:0000024 NCBI chr17:24,230,064...24,253,219 JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2680164 (PMID:16806156)
Ensembl
RGD
PMID:16806156 GO_REF:0000107 NCBI chr 5:66,449,348...66,506,371 JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:12975342)
Ensembl
RGD
PMID:12975342 GO_REF:0000107 NCBI chr 8:124,672,677...124,761,741 JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
ISO (PMID:8988166), (PMID:8988167)
(PMID:8988167)
MGI:99829 (PMID:15030764)
RGD PMID:8988166 PMID:8988167 PMID:15030764 NCBI chr 6:50,674,910...50,676,904 JBrowse link
G Twist2 twist family bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:99829 (PMID:15030764) RGD PMID:15030764 NCBI chr 9:99,822,242...99,866,722 JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within ISO MGI:5315747 (PMID:22228095) RGD PMID:22228095 NCBI chr14:43,396,130...43,460,012 JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:1856821|MGI:3526437 (PMID:16054034), (PMID:16998816) RGD PMID:16054034 PMID:16998816 NCBI chr10:89,135,362...89,157,065 JBrowse link
embryonic neurocranium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1917550 (PMID:27395007) RGD PMID:27395007 NCBI chr 1:244,584,477...244,590,578 JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within ISO MGI:3531090|MGI:99604 (PMID:27395007) RGD PMID:27395007 NCBI chr 1:95,379,542...95,384,532 JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (PMID:27395007) RGD PMID:27395007 NCBI chr17:54,134,064...54,405,198 JBrowse link
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:81,255,814...81,258,587 JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within ISO MGI:4839485 (PMID:20589884) RGD PMID:20589884 NCBI chr  X:66,404,807...66,427,775 JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in ISO (PMID:23267094) RGD PMID:23267094 NCBI chr 1:40,443,926...40,632,911 JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 acts_upstream_of_or_within ISO MGI:3589383 (PMID:16020517) RGD PMID:16020517 NCBI chr18:54,136,887...54,199,545 JBrowse link
G Tgfb2 transforming growth factor, beta 2 IDA RGD PMID:11002343 RGD:1579866 NCBI chr13:98,160,075...98,261,771 JBrowse link
G Tgfb3 transforming growth factor, beta 3 IDA RGD PMID:11002343 RGD:1579866 NCBI chr 6:111,435,170...111,457,646 JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (PMID:19286674) RGD PMID:19286674 NCBI chr 4:161,590,478...161,632,244 JBrowse link
embryonic skeletal joint development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO MGI:2682061 (PMID:21185280) RGD PMID:21185280 NCBI chr 7:86,265,651...86,544,488 JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934258 (PMID:17191253) RGD PMID:17191253 NCBI chr 9:76,504,315...76,510,532 JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO UniProtKB:Q91ZD1 (PMID:21262216) RGD PMID:21262216 NCBI chr 6:32,369,561...32,380,822 JBrowse link
G Osr2 odd-skipped related transcription factor 2 involved_in ISO UniProtKB:Q9WVG7 (PMID:21262216) RGD PMID:21262216 NCBI chr 7:66,487,841...66,495,003 JBrowse link
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within ISO (PMID:18565096) RGD PMID:18565096 NCBI chr 3:174,659,683...174,671,978 JBrowse link
embryonic skeletal joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin1 axin 1 acts_upstream_of_or_within ISO MGI:1856035|MGI:1856036 RGD MGI:48782 NCBI chr10:15,163,477...15,215,615 JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:103302|MGI:1857137 (PMID:9664686)
Ensembl
RGD
PMID:9664686 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO MGI:1934010|MGI:88180 (PMID:9664686) RGD PMID:9664686 NCBI chr 3:182,059,318...182,135,273 JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in ISO
IEA
(PMID:16752401)
GO_REF:0000107
RGD
Ensembl
PMID:16752401 GO_REF:0000107 NCBI chr 7:130,977,561...131,006,627 JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:96193|MGI:96203 (PMID:20978074)
GO_REF:0000033
RGD
GO_Central
PMID:20978074 GO_REF:0000033 NCBI chr 4:81,342,527...81,346,189 JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:96172|MGI:96203 (PMID:20978074)
GO_REF:0000033
RGD
GO_Central
PMID:20978074 GO_REF:0000033 NCBI chr 7:134,091,224...134,094,738 JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:96172|MGI:96193 (PMID:20978074)
GO_REF:0000033
RGD
GO_Central
PMID:20978074 GO_REF:0000033 NCBI chr 3:59,584,840...59,587,257 JBrowse link
G Hyal1 hyaluronidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2658730 (PMID:18772348)
Ensembl
RGD
PMID:18772348 GO_REF:0000107 NCBI chr 8:108,250,668...108,254,519 JBrowse link
G Nog noggin involved_in ISO
IEA
(PMID:16151340)
GO_REF:0000107
RGD
Ensembl
PMID:16151340 GO_REF:0000107 NCBI chr10:74,625,874...74,627,501 JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO UniProtKB:Q91ZD1 (PMID:21262216) RGD PMID:21262216 NCBI chr 6:32,369,561...32,380,822 JBrowse link
G Osr2 odd-skipped related transcription factor 2 involved_in ISO (PMID:21262216) RGD PMID:21262216 NCBI chr 7:66,487,841...66,495,003 JBrowse link
G Shox2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3626291 (PMID:18514492)
Ensembl
RGD
PMID:18514492 GO_REF:0000107 NCBI chr 2:153,524,324...153,537,571 JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q91ZD1 (PMID:21262216)
Ensembl
RGD
PMID:21262216 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661 JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO UniProtKB:Q91ZD1 (PMID:21262216) RGD PMID:21262216 NCBI chr 6:32,369,561...32,380,822 JBrowse link
G Osr2 odd-skipped related transcription factor 2 involved_in ISO UniProtKB:Q9WVG7 (PMID:21262216) RGD PMID:21262216 NCBI chr 7:66,487,841...66,495,003 JBrowse link
embryonic skeletal system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2a activin A receptor type 2A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1861779 (PMID:7885474)
Ensembl
RGD
PMID:7885474 GO_REF:0000107 NCBI chr 3:53,614,143...53,701,933 JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO MGI:99161 (PMID:11290297) RGD PMID:11290297 NCBI chr17:81,332,175...81,341,625 JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO MGI:2158495 (PMID:16712836) RGD PMID:16712836 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Cdk20 cyclin-dependent kinase 20 acts_upstream_of_or_within ISO MGI:6113512 (PMID:28817564) RGD PMID:28817564 NCBI chr17:706,863...717,828 JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in ISO (PMID:18553566) RGD PMID:18553566 NCBI chr10:80,380,458...80,397,461 JBrowse link
G Deaf1 DEAF1 transcription factor involved_in ISS
ISO
GO_REF:0000024
(PMID:14966286)
UniProt
RGD
PMID:14966286 GO_REF:0000024 NCBI chr 1:196,401,857...196,435,541 JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 acts_upstream_of_or_within ISO (PMID:19247431) RGD PMID:19247431 NCBI chr 6:128,410,216...128,417,518 JBrowse link
G Dlx1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857826|MGI:94902 (PMID:9187081)
Ensembl
RGD
PMID:9187081 GO_REF:0000107 NCBI chr 3:56,356,190...56,360,780 JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within ISO MGI:1857828|MGI:94901 (PMID:9187081) RGD PMID:9187081 NCBI chr 3:56,370,238...56,373,581 JBrowse link
G Dlx3 distal-less homeobox 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:80,064,489...80,069,891 JBrowse link
G Dlx4 distal-less homeobox 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:80,085,037...80,090,434 JBrowse link
G Dlx5 distal-less homeobox 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:35,965,579...35,969,973 JBrowse link
G Dlx6 distal-less homeobox 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:34,984,264...34,989,926 JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 acts_upstream_of_or_within ISO MGI:3512139 (PMID:16387292) RGD PMID:16387292 NCBI chr 1:223,317,543...223,324,131 JBrowse link
G Ednra endothelin receptor type A involved_in IEA
ISO
GO_REF:0000107
MGI:103580 (PMID:19017795)
Ensembl
RGD
PMID:19017795 GO_REF:0000107 NCBI chr19:47,137,360...47,207,961 JBrowse link
G Etl4 enhancer trap locus 4 involved_in ISO (PMID:16204209) RGD PMID:16204209 NCBI chr17:87,749,486...88,213,158 JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within ISO MGI:2135961 (PMID:17544391) RGD PMID:17544391 NCBI chr15:32,208,993...32,254,952 JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:3711070|MGI:98297 (PMID:17504941) RGD PMID:17504941 NCBI chr17:4,487,716...4,490,701 JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in IEA
ISO
GO_REF:0000107
MGI:105923 (PMID:19017795)
Ensembl
RGD
PMID:19017795 GO_REF:0000107 NCBI chr16:37,928,145...37,931,488 JBrowse link
G Hoxa2 homeobox A2 involved_in ISO (PMID:25889273) RGD PMID:25889273 NCBI chr 4:81,262,668...81,266,970 JBrowse link
G Hoxa3 homeobox A3 acts_upstream_of_or_within ISO MGI:96207 (PMID:7913519) RGD PMID:7913519 NCBI chr 4:81,269,243...81,313,218 JBrowse link
G Hoxa5 homeo box A5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000117
MGI:96186|MGI:96196 (PMID:17626057)
UniProt
RGD
PMID:17626057 GO_REF:0000117 NCBI chr 4:81,302,341...81,306,234 JBrowse link
G Hoxa6 homeobox A6 acts_upstream_of_or_within ISO MGI:96187|MGI:96197 (PMID:17626057) RGD PMID:17626057 NCBI chr 4:81,304,918...81,313,184 JBrowse link
G Hoxa9 homeobox A9 acts_upstream_of_or_within ISO MGI:2150411|MGI:96190|MGI:96199|MGI:96210 (PMID:17626057), (PMID:8625797), (PMID:9013929) RGD PMID:8625797 PMID:9013929 PMID:17626057 NCBI chr 4:81,323,235...81,329,344 JBrowse link
G Hoxb5 homeo box B5 acts_upstream_of_or_within ISO MGI:96177|MGI:96196 (PMID:17626057) RGD PMID:17626057 NCBI chr10:81,269,372...81,271,580 JBrowse link
G Hoxb6 homeo box B6 acts_upstream_of_or_within ISO MGI:2151485|MGI:96178|MGI:96197 (PMID:17626057), (PMID:7828847) RGD PMID:7828847 PMID:17626057 NCBI chr10:81,755,263...81,763,999 JBrowse link
G Hoxb9 homeo box B9 acts_upstream_of_or_within ISO MGI:2150429|MGI:96180|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96199|MGI:96210 (PMID:10885747), (PMID:17626057), (PMID:9013929) RGD PMID:9013929 PMID:10885747 PMID:17626057 NCBI chr10:81,237,312...81,240,818 JBrowse link
G Hoxc5 homeo box C5 acts_upstream_of_or_within ISO MGI:96177|MGI:96186 (PMID:17626057) RGD PMID:17626057 NCBI chr 7:134,150,988...134,154,410 JBrowse link
G Hoxc6 homeo box C6 acts_upstream_of_or_within ISO MGI:96178|MGI:96187 (PMID:17626057) RGD PMID:17626057 NCBI chr 7:134,138,017...134,148,899 JBrowse link
G Hoxc9 homeobox C9 acts_upstream_of_or_within ISO MGI:96180|MGI:96190|MGI:96210 (PMID:17626057) RGD PMID:17626057 NCBI chr 7:134,118,817...134,121,497 JBrowse link
G Hoxd1 homeo box D1 acts_upstream_of_or_within ISO MGI:3616015 (PMID:11511348) RGD PMID:11511348 NCBI chr 3:59,665,629...59,667,769 JBrowse link
G Hoxd9 homeo box D9 acts_upstream_of_or_within ISO MGI:2150414|MGI:96180|MGI:96190|MGI:96199 (PMID:17626057), (PMID:8625797) RGD PMID:8625797 PMID:17626057 NCBI chr 3:59,600,575...59,602,755 JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 acts_upstream_of_or_within ISO MGI:5056371 (PMID:21515572) RGD PMID:21515572 NCBI chr13:82,170,079...82,190,018 JBrowse link
G LOC103692127 homeobox protein Hox-A5 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117
G LOC120098145 homeobox protein ceh-37-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,199,616...68,204,251 JBrowse link
G Mbtd1 mbt domain containing 1 acts_upstream_of_or_within ISO MGI:4940055 (PMID:21252303) RGD PMID:21252303 NCBI chr10:79,336,041...79,392,315 JBrowse link
G Mks1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4887578 (PMID:21045211)
Ensembl
RGD
PMID:21045211 GO_REF:0000107 NCBI chr10:73,152,599...73,167,451 JBrowse link
G Mosmo modulator of smoothened acts_upstream_of_or_within ISO (PMID:34486668) RGD PMID:34486668 NCBI chr 1:175,217,680...175,288,521 JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within ISO MGI:1857926|MGI:1931319 (PMID:10449756), (PMID:10572046) RGD PMID:10449756 PMID:10572046 NCBI chr14:69,183,795...69,186,182 JBrowse link
G Nog noggin involved_in ISO (PMID:10080184) RGD PMID:10080184 NCBI chr10:74,625,874...74,627,501 JBrowse link
G Obox2 oocyte specific homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,191,238...68,199,383 JBrowse link
G Obox2l1 oocyte specific homeobox 2 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,182,725...68,184,559 JBrowse link
G Obox2l2 oocyte specific homeobox 2 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,216,812...68,219,145 JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO MGI:1857831 (PMID:8631261) RGD PMID:8631261 NCBI chr 5:151,996,368...152,098,023 JBrowse link
G Pbx1 PBX homeobox 1 acts_upstream_of_or_within ISO MGI:2155612 (PMID:11566859) RGD PMID:11566859 NCBI chr13:80,278,766...80,588,563 JBrowse link
G Pcgf2 polycomb group ring finger 2 acts_upstream_of_or_within ISO MGI:88174 (PMID:11290297) RGD PMID:11290297 NCBI chr10:83,178,926...83,191,610 JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in ISO
IEA
(PMID:18519639)
GO_REF:0000107
RGD
Ensembl
PMID:18519639 GO_REF:0000107 NCBI chr 1:214,837,847...215,267,626 JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (PMID:15994349) RGD PMID:15994349 NCBI chr 1:235,893,917...235,901,315 JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (PMID:7743923) RGD PMID:7743923 NCBI chr 7:108,176,608...108,178,626 JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:95655 (PMID:17504941)
Ensembl
RGD
PMID:17504941 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170 JBrowse link
G Slc35d1 solute carrier family 35 member D1 acts_upstream_of_or_within ISO MGI:3774133 (PMID:17952091) RGD PMID:17952091 NCBI chr 5:117,928,628...117,981,289 JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO MGI:1277166 (PMID:17584888) RGD PMID:17584888 NCBI chr 7:135,419,864...135,450,513 JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:98372 (PMID:17584888) RGD PMID:17584888 NCBI chr 3:57,811,855...57,857,150 JBrowse link
G Sulf1 sulfatase 1 involved_in IEA
ISO
ISS
GO_REF:0000104
UniProtKB:Q8CFG0 (PMID:18213582)
GO_REF:0000024
UniProt
RGD
PMID:18213582 GO_REF:0000024 GO_REF:0000104 NCBI chr 5:6,362,894...6,526,174 JBrowse link
G Sulf2 sulfatase 2 involved_in ISO UniProtKB:Q8CFG0 (PMID:18213582) RGD PMID:18213582 NCBI chr 3:154,822,079...154,904,566 JBrowse link
G Tapt1 transmembrane anterior posterior transformation 1 acts_upstream_of_or_within ISO MGI:1857317 (PMID:17151244) RGD PMID:17151244 NCBI chr14:71,085,966...71,132,228 JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO MGI:1857760 (PMID:8293872) RGD PMID:8293872 NCBI chr 1:52,298,104...52,309,813 JBrowse link
G Ucma upper zone of growth plate and cartilage matrix associated involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:73,293,977...73,303,709 JBrowse link
G Wnt11 Wnt family member 11 involved_in ISO (PMID:9757009) RGD PMID:9757009 NCBI chr 1:162,545,660...162,565,456 JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO
IEA
(PMID:19918918)
GO_REF:0000107
RGD
Ensembl
PMID:19918918 GO_REF:0000107 NCBI chr16:3,702,300...3,724,860 JBrowse link
G Xylt1 xylosyltransferase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:24161523)
UniProt
RGD
PMID:24161523 GO_REF:0000024 NCBI chr 1:171,643,925...171,929,774 JBrowse link
embryonic skeletal system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx1 ALX homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:108359 (PMID:15728667), (PMID:9847249)
GO_REF:0000033
RGD
GO_Central
PMID:9847249 PMID:15728667 GO_REF:0000033 NCBI chr 7:38,157,626...38,177,220 JBrowse link
G Alx3 ALX homeobox 3 acts_upstream_of_or_within ISO MGI:108359 (PMID:11641221), (PMID:15728667) RGD PMID:11641221 PMID:15728667 NCBI chr 2:195,231,197...195,241,609 JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO MGI:104621|MGI:1277097|MGI:1856069 (PMID:11641221), (PMID:15728667), (PMID:9847249) RGD PMID:9847249 PMID:11641221 PMID:15728667 NCBI chr 3:79,611,682...79,648,260 JBrowse link
G Asxl2 ASXL transcriptional regulator 2 acts_upstream_of_or_within ISO MGI:3840841 (PMID:19270745) RGD PMID:19270745 NCBI chr 6:26,425,017...26,514,899 JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO MGI:99161 (PMID:11290297) RGD PMID:11290297 NCBI chr17:81,332,175...81,341,625 JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO MGI:2158495 (PMID:16712836) RGD PMID:16712836 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within ISO MGI:3768254 (PMID:16079159) RGD PMID:16079159 NCBI chr 7:20,524,535...20,743,008 JBrowse link
G Col11a1 collagen type XI alpha 1 chain acts_upstream_of_or_within ISO MGI:1856399 (PMID:4100752) RGD PMID:4100752 NCBI chr 2:201,820,715...202,013,853 JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2680670 (PMID:11238884)
Ensembl
RGD
PMID:11238884 GO_REF:0000107 NCBI chr11:82,416,853...82,607,797 JBrowse link
G Dscaml1 DS cell adhesion molecule-like 1 involved_in ISO (PMID:12051741) RGD PMID:12051741 NCBI chr 8:54,637,054...54,954,042 JBrowse link
G Dync2i1 dynein 2 intermediate chain 1 involved_in ISO (PMID:23910462) RGD PMID:23910462 NCBI chr 6:137,133,418...137,189,937 JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:2150426 (PMID:10471511) RGD PMID:10471511 NCBI chr 5:4,863,501...5,101,483 JBrowse link
G Flvcr1 FLVCR choline and heme transporter 1 acts_upstream_of_or_within ISO MGI:5474636 (PMID:23187127) RGD PMID:23187127 NCBI chr13:102,586,263...102,608,647 JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857740 (PMID:9409679) RGD PMID:9409679 NCBI chr19:66,094,718...66,097,420 JBrowse link
G Fuz fuzzy planar cell polarity protein involved_in ISS
ISO
GO_REF:0000024
(PMID:19767740), (PMID:21935430), (PMID:23806618)
UniProt
RGD
PMID:19767740 PMID:21935430 PMID:23806618 GO_REF:0000024 NCBI chr 1:95,379,542...95,384,532 JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1277234 (PMID:15728667) RGD PMID:15728667 NCBI chr17:54,134,064...54,405,198 JBrowse link
G Gsc goosecoid homeobox acts_upstream_of_or_within ISO MGI:1857496|MGI:1857726 (PMID:7555718), (PMID:7555726) RGD PMID:7555718 PMID:7555726 NCBI chr 6:123,388,072...123,390,111 JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within ISO MGI:102778 (PMID:15634706) RGD PMID:15634706 NCBI chr 4:81,262,668...81,266,970 JBrowse link
G Hoxa3 homeobox A3 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:96184|MGI:96207 (PMID:9441667)
GO_Central
RGD
PMID:9441667 GO_REF:0000033 NCBI chr 4:81,269,243...81,313,218 JBrowse link
G Hoxa4 homeo box A4 acts_upstream_of_or_within ISO MGI:2150391|MGI:96185|MGI:96208 (PMID:7628700), (PMID:7918106) RGD PMID:7628700 PMID:7918106 NCBI chr 4:81,289,677...81,291,685 JBrowse link
G Hoxa5 homeo box A5 acts_upstream_of_or_within ISO MGI:2150397|MGI:3723623 (PMID:17417799), (PMID:7901120), (PMID:9603431) RGD PMID:7901120 PMID:9603431 PMID:17417799 NCBI chr 4:81,302,341...81,306,234 JBrowse link
G Hoxa7 homeobox A7 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:96188 (PMID:9784603)
Ensembl
RGD
PMID:9784603 GO_REF:0000107 NCBI chr 4:81,315,730...81,317,629 JBrowse link
G Hoxa9 homeobox A9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:81,323,235...81,329,344 JBrowse link
G Hoxb1 homeo box B1 acts_upstream_of_or_within ISO MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (PMID:10885747) RGD PMID:10885747 NCBI chr10:81,331,507...81,332,928 JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within ISO MGI:96182|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (PMID:10885747) RGD PMID:10885747 NCBI chr10:81,317,828...81,320,220 JBrowse link
G Hoxb3 homeo box B3 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2151773|MGI:96175|MGI:96182|MGI:96183|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190|MGI:96207 (PMID:10885747), (PMID:9441667)
GO_Central
RGD
PMID:9441667 PMID:10885747 GO_REF:0000033 NCBI chr10:81,258,739...81,314,134 JBrowse link
G Hoxb4 homeo box B4 acts_upstream_of_or_within ISO MGI:96176|MGI:96183|MGI:96184|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (PMID:10885747), (PMID:7628700) RGD PMID:7628700 PMID:10885747 NCBI chr10:81,284,552...81,287,134 JBrowse link
G Hoxb5 homeo box B5 acts_upstream_of_or_within ISO MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (PMID:10885747), (PMID:7828847) RGD PMID:7828847 PMID:10885747 NCBI chr10:81,269,372...81,271,580 JBrowse link
G Hoxb6 homeo box B6 acts_upstream_of_or_within ISO MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96188|MGI:96189|MGI:96190 (PMID:10885747) RGD PMID:10885747 NCBI chr10:81,755,263...81,763,999 JBrowse link
G Hoxb7 homeo box B7 acts_upstream_of_or_within ISO MGI:2150401|MGI:96179|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96189|MGI:96190 (PMID:10885747), (PMID:9784603) RGD PMID:9784603 PMID:10885747 NCBI chr10:81,749,159...81,752,577