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ONTOLOGY REPORT - ANNOTATIONS


Term:RNA polymerase III general transcription initiation factor activity
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Accession:GO:0000995 term browser browse the term
Definition:A general transcription initiation factor activity that contributes to transcription start site selection and transcription initiation of genes transcribed by RNA polymerase III. Factors required for RNA polymerase III transcription initiation include TFIIIA, TFIIIB and TFIIIC. RNA polymerase III transcribes genes encoding short RNAs, including tRNAs, 5S rRNA, U6 snRNA, the short ncRNA component of RNases P, the mitochondrial RNA processing (MRP) RNA, the signal recognition particle SRP RNA, and in higher eukaryotes a number of micro and other small RNAs, though there is some variability across species as to whether a given small noncoding RNA is transcribed by RNA polymerase II or RNA polymerase III.
Synonyms:exact_synonym: RNA polymerase III general initiation factor activity
 narrow_synonym: core RNA polymerase III binding transcription factor activity;   sequence-specific DNA binding RNA polymerase III transcription factor activity
 alt_id: GO:0001034



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RNA polymerase III general transcription initiation factor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brf1 BRF1, RNA polymerase III transcription initiation factor subunit enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:132,034,378...132,081,313
Ensembl chr 6:132,037,272...132,081,278
JBrowse link
G Gtf3a general transcription factor III A IDA RGD PMID:11814676 RGD:632850 NCBI chr12:8,136,746...8,144,690
Ensembl chr12:8,136,747...8,144,690
JBrowse link
G Gtf3c1 general transcription factor IIIC subunit 1 enables ISO
IEA
(PMID:17409385)
GO_REF:0000107
RGD
Ensembl
PMID:17409385 GO_REF:0000107 NCBI chr 1:180,203,995...180,270,201
Ensembl chr 1:180,203,995...180,270,201
JBrowse link
G Gtf3c2 general transcription factor IIIC subunit 2 enables ISO (PMID:17409385) RGD PMID:17409385 NCBI chr 6:25,196,439...25,221,338
Ensembl chr 6:25,197,268...25,220,490
JBrowse link
G Gtf3c3 general transcription factor IIIC subunit 3 enables ISO (PMID:17409385) RGD PMID:17409385 NCBI chr 9:55,882,252...55,943,037
Ensembl chr 9:55,883,721...55,942,967
JBrowse link
G Gtf3c4 general transcription factor IIIC subunit 4 enables ISO (PMID:17409385) RGD PMID:17409385 NCBI chr 3:12,154,803...12,172,795
Ensembl chr 3:12,154,805...12,172,725
JBrowse link
G Gtf3c5 general transcription factor IIIC subunit 5 enables ISO (PMID:17409385) RGD PMID:17409385 NCBI chr 3:11,893,867...11,914,187
Ensembl chr 3:11,893,875...11,914,180
JBrowse link
G Gtf3c6 general transcription factor 3C subunit 6 enables ISO (PMID:17409385) RGD PMID:17409385 NCBI chr20:43,656,400...43,668,382
Ensembl chr20:43,655,875...43,667,873
JBrowse link
G Snapc4 small nuclear RNA activating complex, polypeptide 4 enables ISO (PMID:9418884) RGD PMID:9418884 NCBI chr 3:9,182,061...9,200,819
Ensembl chr 3:9,182,067...9,199,518
JBrowse link
G Snapc5 small nuclear RNA activating complex, polypeptide 5 enables ISO (PMID:9732265) RGD PMID:9732265 NCBI chr 8:64,677,204...64,680,769
Ensembl chr 8:64,677,205...64,681,964
JBrowse link
G Tbp TATA box binding protein enables ISO (PMID:26638071) RGD PMID:26638071 NCBI chr 1:56,463,330...56,480,430
Ensembl chr 1:56,463,618...56,510,016
JBrowse link

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  molecular_function 20890
    general transcription initiation factor activity 52
      RNA polymerase III general transcription initiation factor activity 11
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