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ONTOLOGY REPORT - ANNOTATIONS


Term:GARP complex
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Accession:GO:0000938 term browser browse the term
Definition:A quatrefoil tethering complex required for retrograde traffic from the early endosome back to the late Golgi and biogenesis of cytoplasmic vesicles.
Synonyms:exact_synonym: Golgi associated retrograde protein complex;   VFT tethering complex;   Vps fifty three tethering complex



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GARP complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eipr1 EARP complex and GARP complex interacting protein 1 part_of
located_in
IEA
ISO
ISS
GO_REF:0000107
(PMID:27440922)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:27440922 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:45,388,451...45,502,089
Ensembl chr 6:45,388,376...45,502,083
JBrowse link
G Vps51 VPS51 subunit of GARP complex part_of ISO
IBA
(PMID:20685960), (PMID:25799061)
GO_REF:0000033
RGD
GO_Central
PMID:20685960 PMID:25799061 GO_REF:0000033 NCBI chr 1:203,360,434...203,370,422
Ensembl chr 1:203,360,440...203,370,430
JBrowse link
G Vps52 VPS52 subunit of GARP complex part_of ISO
IBA
(PMID:25799061)
GO_REF:0000033
RGD
GO_Central
PMID:25799061 GO_REF:0000033 NCBI chr20:4,920,715...4,931,685
Ensembl chr20:4,860,843...4,931,665
JBrowse link
G Vps53 VPS53 subunit of GARP complex part_of ISO
IBA
(PMID:19620288), (PMID:25799061)
GO_REF:0000033
RGD
GO_Central
PMID:19620288 PMID:25799061 GO_REF:0000033 NCBI chr10:60,919,820...61,038,674
Ensembl chr10:60,919,820...61,038,676
JBrowse link
G Vps54 VPS54 subunit of GARP complex part_of IEA
ISO
IBA
ISS
GO_REF:0000107
(PMID:20615984)
GO_REF:0000033
(PMID:19620288), (PMID:25799061)
GO_REF:0000024
Ensembl
RGD
GO_Central
UniProt
PMID:19620288 PMID:20615984 PMID:25799061 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:95,378,821...95,455,871
Ensembl chr14:95,378,012...95,455,857
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21322
    protein-containing complex 6790
      vesicle tethering complex 74
        GARP complex 5
Path 2
Term Annotations click to browse term
  cellular_component 21322
    cellular anatomical structure 21027
      organelle 14240
        membrane-bounded organelle 12805
          vesicle 2260
            intracellular vesicle 2074
              cytoplasmic vesicle 2065
                GARP complex 5
paths to the root