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ONTOLOGY REPORT - ANNOTATIONS

Term:X chromosome
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Accession:GO:0000805 term browser browse the term
Definition:The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males.
Synonyms:xref: Wikipedia:X_chromosome
 never_in_taxon: NCBITaxon:8782 ! Aves

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X chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk2 cyclin dependent kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:379,849...385,648
Ensembl chrNW_004936646:379,842...385,877 		JBrowse link
G Pcgf3 polycomb group ring finger 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:22,349,166...22,373,256
Ensembl chrNW_004936477:22,349,171...22,373,393 		JBrowse link
G Pcgf5 polycomb group ring finger 5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:3,201,589...3,268,990
Ensembl chrNW_004936601:3,207,250...3,267,372 		JBrowse link
G Sin3b SIN3 transcription regulator family member B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:3,836,109...3,875,416
Ensembl chrNW_004936596:3,837,826...3,875,402 		JBrowse link
Barr body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101956559 core histone macro-H2A.2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:8,474,408...8,509,269
Ensembl chrNW_004936521:8,473,794...8,509,268 		JBrowse link
G LOC101963041 histone H3.3A located_in ISO (PMID:15657431) MGI PMID:15657431 NCBI chrNW_004936526:2,835,002...2,842,328 JBrowse link
G LOC101971629 core histone macro-H2A.1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:2,496,489...2,556,352
Ensembl chrNW_004936597:2,495,862...2,556,603 		JBrowse link
G LOC101974663 histone H2A.Z NOT|located_in ISO (PMID:11331621) MGI PMID:11331621 NCBI chrNW_004936520:3,059,623...3,061,941 JBrowse link
G Lrif1 ligand dependent nuclear receptor interacting factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936704:2,313,923...2,334,839
Ensembl chrNW_004936704:2,319,145...2,333,400 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936672:1,686,070...1,838,315
Ensembl chrNW_004936672:1,685,734...1,838,315 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18226
    cellular anatomical structure 18005
      organelle 13364
        membraneless organelle 4797
          intracellular membraneless organelle 4797
            chromosome 1248
              sex chromosome 41
                X chromosome 10
                  Barr body 6
                  X chromosome located dosage compensation complex, transcription activating 0
paths to the root