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ONTOLOGY REPORT - ANNOTATIONS

Term:X chromosome
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Accession:GO:0000805 term browser browse the term
Definition:The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males.
Synonyms:xref: Wikipedia:X_chromosome
 never_in_taxon: NCBITaxon:8782 ! Aves


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X chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK2 cyclin dependent kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:21,365,723...21,372,170
Ensembl chr 5:21,365,764...21,372,168 		JBrowse link
G PCGF3 polycomb group ring finger 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:140,435...189,796
Ensembl chr 8:140,446...182,261 		JBrowse link
G PCGF5 polycomb group ring finger 5 located_in ISO (PMID:28596365) UniProt PMID:28596365 NCBI chr14:102,827,140...102,961,862
Ensembl chr14:102,636,838...102,961,860 		JBrowse link
G SIN3B SIN3 transcription regulator family member B located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:60,750,227...60,791,660
Ensembl chr 2:60,750,231...60,791,612 		JBrowse link
Barr body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H2AZ1 H2A.Z variant histone 1 NOT|located_in ISO (PMID:11331621) MGI PMID:11331621 NCBI chr 8:120,563,752...120,566,023
Ensembl chr 8:120,563,752...120,566,177 		JBrowse link
G H3-3A H3.3 histone A located_in ISO (PMID:15657431) MGI PMID:15657431 NCBI chr10:13,939,938...13,947,976
Ensembl chr10:13,923,077...13,948,484 		JBrowse link
G LRIF1 ligand dependent nuclear receptor interacting factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:109,271,562...109,292,313
Ensembl chr 4:109,271,728...109,292,310 		JBrowse link
G MACROH2A1 macroH2A.1 histone located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:137,535,128...137,623,886
Ensembl chr 2:137,534,138...137,623,886 		JBrowse link
G MACROH2A2 macroH2A.2 histone located_in IEA Ensembl GO_REF:0000107 NCBI chr14:73,002,385...73,055,228
Ensembl chr14:73,003,117...73,055,229 		JBrowse link
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:103,809,732...103,986,057
Ensembl chr 6:103,808,066...103,965,335 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19753
    cellular anatomical structure 19508
      organelle 13515
        membraneless organelle 4971
          intracellular membraneless organelle 4971
            chromosome 1298
              sex chromosome 41
                X chromosome 10
                  Barr body 6
                  X chromosome located dosage compensation complex, transcription activating 0
paths to the root