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ONTOLOGY REPORT - ANNOTATIONS

Term:X chromosome
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Accession:GO:0000805 term browser browse the term
Definition:The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males.
Synonyms:xref: Wikipedia:X_chromosome
 never_in_taxon: NCBITaxon:8782 ! Aves

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X chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk2 cyclin dependent kinase 2 located_in ISO (PMID:17784788) MGI PMID:17784788 NCBI chrNW_004624802:12,076,443...12,082,608
Ensembl chrNW_004624802:12,076,443...12,082,630 		JBrowse link
G Pcgf3 polycomb group ring finger 3 located_in ISO (PMID:28596365) UniProt PMID:28596365 NCBI chrNW_004624755:26,294,675...26,344,864
Ensembl chrNW_004624755:26,294,689...26,326,318 		JBrowse link
G Pcgf5 polycomb group ring finger 5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:2,423,269...2,545,006
Ensembl chrNW_004624737:2,489,788...2,540,488 		JBrowse link
G Sin3b SIN3 transcription regulator family member B located_in ISO (PMID:16787967) MGI PMID:16787967 NCBI chrNW_004624908:766,727...787,951
Ensembl chrNW_004624908:767,421...788,616 		JBrowse link
Barr body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101699418 histone H3.3 located_in ISO (PMID:15657431) MGI PMID:15657431 NCBI chrNW_004624807:194,372...203,205 JBrowse link
G LOC101701243 histone H2A.Z NOT|located_in ISO (PMID:11331621) MGI PMID:11331621 NCBI chrNW_004624830:7,238,897...7,240,566
Ensembl chrNW_004624830:7,238,929...7,240,563 		JBrowse link
G LOC101706296 core histone macro-H2A.1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:11,650,067...11,714,399
Ensembl chrNW_004624733:11,650,537...11,715,999 		JBrowse link
G LOC101712013 core histone macro-H2A.2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:4,227,897...4,276,595
Ensembl chrNW_004624754:4,227,644...4,279,077 		JBrowse link
G Lrif1 ligand dependent nuclear receptor interacting factor 1 located_in ISO (PMID:23542155)
(PMID:26391951)		 UniProt PMID:23542155 PMID:26391951 NCBI chrNW_004624772:6,713,224...6,733,841
Ensembl chrNW_004624772:6,713,055...6,733,608 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624770:13,000,532...13,123,346
Ensembl chrNW_004624770:13,000,316...13,124,031 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18619
    cellular anatomical structure 18486
      organelle 13116
        membraneless organelle 4798
          intracellular membraneless organelle 4798
            chromosome 1303
              sex chromosome 40
                X chromosome 10
                  Barr body 6
                  X chromosome located dosage compensation complex, transcription activating 0
paths to the root