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ONTOLOGY REPORT - ANNOTATIONS

Term:X chromosome
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Accession:GO:0000805 term browser browse the term
Definition:The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males.
Synonyms:xref: Wikipedia:X_chromosome
 never_in_taxon: NCBITaxon:8782 ! Aves

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X chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK2 cyclin dependent kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:51,905,085...51,910,209
Ensembl chr11:51,905,115...51,909,907 		JBrowse link
G PCGF3 polycomb group ring finger 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr27:48,015,976...48,077,688
Ensembl chr27:48,020,010...48,053,520 		JBrowse link
G PCGF5 polycomb group ring finger 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:84,494,147...84,613,269
Ensembl chr 9:84,494,202...84,607,330 		JBrowse link
G SIN3B SIN3 transcription regulator family member B located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:15,338,402...15,387,828
Ensembl chr 6:15,338,439...15,387,828 		JBrowse link
Barr body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H2AFY core histone macro-H2A.1 located_in IEA Ensembl GO_REF:0000107 NCBI chr23:38,113,212...38,178,227
Ensembl chr23:38,113,195...38,168,382 		JBrowse link
G H2AFY2 H2A histone family member Y2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:61,194,887...61,254,361
Ensembl chr 9:61,195,431...61,231,228 		JBrowse link
G LOC103231004 histone H3.3A located_in ISO (PMID:15657431) MGI PMID:15657431 NCBI chr25:3,696,153...3,704,886 JBrowse link
G LOC103236032 histone H2A.Z NOT|located_in ISO (PMID:11331621) MGI PMID:11331621 NCBI chr 7:48,079,894...48,082,147 JBrowse link
G LRIF1 ligand dependent nuclear receptor interacting factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:22,598,160...22,614,752
Ensembl chr20:22,598,124...22,617,024 		JBrowse link
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 located_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr18:61,921,477...62,069,187
Ensembl chr18:61,921,124...62,070,878 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20997
    cellular anatomical structure 20610
      organelle 15470
        membraneless organelle 5799
          intracellular membraneless organelle 5799
            chromosome 1356
              sex chromosome 42
                X chromosome 10
                  Barr body 6
                  X chromosome located dosage compensation complex, transcription activating 0
paths to the root