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ONTOLOGY REPORT - ANNOTATIONS

Term:X chromosome
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Accession:GO:0000805 term browser browse the term
Definition:The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males.
Synonyms:xref: Wikipedia:X_chromosome
 never_in_taxon: NCBITaxon:8782 ! Aves

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X chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk2 cyclin dependent kinase 2 located_in ISO (PMID:17784788) MGI PMID:17784788 NCBI chrNW_004955458:3,555,603...3,561,063
Ensembl chrNW_004955458:3,555,603...3,562,120 		JBrowse link
G Pcgf3 polycomb group ring finger 3 located_in ISO (PMID:28596365) UniProt PMID:28596365 NCBI chrNW_004955514:307,331...350,039
Ensembl chrNW_004955514:307,332...350,039 		JBrowse link
G Pcgf5 polycomb group ring finger 5 located_in ISO (PMID:28596365) UniProt PMID:28596365 NCBI chrNW_004955425:1,913,711...1,980,800
Ensembl chrNW_004955425:1,919,228...1,979,874 		JBrowse link
G Sin3b SIN3 transcription regulator family member B located_in ISO (PMID:16787967) MGI PMID:16787967 NCBI chrNW_004955524:1,049,828...1,067,637
Ensembl chrNW_004955524:1,050,425...1,071,662 		JBrowse link
Barr body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H3f3a H3 histone, family 3A located_in ISO (PMID:15657431) MGI PMID:15657431 NCBI chrNW_004955489:269,900...278,398
Ensembl chrNW_004955489:269,900...278,398 		JBrowse link
G LOC102008188 core histone macro-H2A.1 located_in ISO (PMID:11331621), (PMID:18936163) MGI PMID:11331621 PMID:18936163 NCBI chrNW_004955408:30,497,531...30,550,095
Ensembl chrNW_004955408:30,497,531...30,550,118 		JBrowse link
G LOC102017503 core histone macro-H2A.2 located_in ISO (PMID:11331621) MGI PMID:11331621 NCBI chrNW_004955437:21,126,581...21,186,308
Ensembl chrNW_004955437:21,126,006...21,186,797 		JBrowse link
G LOC102021365 histone H2A.Z NOT|located_in ISO (PMID:11331621) MGI PMID:11331621 NCBI chrNW_004955496:7,733,910...7,735,525
Ensembl chrNW_004955496:7,733,918...7,735,525 		JBrowse link
G Lrif1 ligand dependent nuclear receptor interacting factor 1 located_in ISO (PMID:23542155)
(PMID:26391951)		 UniProt PMID:23542155 PMID:26391951 NCBI chrNW_004955435:14,467,123...14,485,109
Ensembl chrNW_004955435:14,469,488...14,484,632 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 located_in ISO (PMID:23542155)
(PMID:18425126), (PMID:26391951)		 UniProt PMID:18425126 PMID:23542155 PMID:26391951 NCBI chrNW_004955402:7,544,265...7,661,191
Ensembl chrNW_004955402:7,544,265...7,649,067 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12839
    cellular anatomical structure 12686
      organelle 10121
        membraneless organelle 3795
          intracellular membraneless organelle 3795
            chromosome 1063
              sex chromosome 40
                X chromosome 10
                  Barr body 6
                  X chromosome located dosage compensation complex, transcription activating 0
paths to the root