Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:X chromosome
go back to main search page
Accession:GO:0000805 term browser browse the term
Definition:The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males.
Synonyms:xref: Wikipedia:X_chromosome
 never_in_taxon: NCBITaxon:8782 ! Aves



show annotations for term's descendants           Sort by:
X chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk2 cyclin dependent kinase 2 located_in IEA
ISO
GO_REF:0000107
(PMID:17784788)
Ensembl
RGD
PMID:17784788 GO_REF:0000107 NCBI chr 7:1,714,392...1,721,964 JBrowse link
G Pcgf3 polycomb group ring finger 3 located_in ISO (PMID:28596365) RGD PMID:28596365 NCBI chr14:1,237,594...1,291,717 JBrowse link
G Pcgf5 polycomb group ring finger 5 located_in ISO (PMID:28596365) RGD PMID:28596365 NCBI chr 1:234,063,854...234,180,022 JBrowse link
G Sin3b SIN3 transcription regulator family member B located_in ISO (PMID:16787967) RGD PMID:16787967 NCBI chr16:17,123,277...17,159,978 JBrowse link
G Xist X inactive specific transcript located_in ISO (PMID:24613346) RGD PMID:24613346 NCBI chr  X:68,474,987...68,492,500 JBrowse link
Barr body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H2az1 H2A.Z variant histone 1 NOT|located_in ISO (PMID:11331621) RGD PMID:11331621 NCBI chr 2:229,026,464...229,031,411 JBrowse link
G H3f3a H3.3 histone A located_in ISO (PMID:15657431) RGD PMID:15657431 NCBI chr13:95,065,085...95,076,695 JBrowse link
G Lrif1 ligand dependent nuclear receptor interacting factor 1 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:23542155)
(PMID:26391951)
UniProt
Ensembl
RGD
PMID:23542155 PMID:26391951 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:194,231,397...194,322,489 JBrowse link
G Macroh2a1 macroH2A.1 histone located_in ISO (PMID:11331621), (PMID:18936163) RGD PMID:11331621 PMID:18936163 NCBI chr17:8,479,331...8,542,071 JBrowse link
G Macroh2a2 macroH2A.2 histone located_in ISO (PMID:11331621) RGD PMID:11331621 NCBI chr20:29,678,194...29,727,867 JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 located_in
is_active_in
ISO
IBA
(PMID:23542155)
GO_REF:0000033
(PMID:18425126), (PMID:26391951)
RGD
GO_Central
PMID:18425126 PMID:23542155 PMID:26391951 GO_REF:0000033 NCBI chr 9:111,243,445...111,387,272 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      organelle 14240
        membraneless organelle 5379
          intracellular membraneless organelle 5379
            chromosome 1403
              sex chromosome 42
                X chromosome 11
                  Barr body 6
                  X chromosome located dosage compensation complex, transcription activating 0
paths to the root