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ONTOLOGY REPORT - ANNOTATIONS


Term:condensed chromosome
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Accession:GO:0000793 term browser browse the term
Definition:A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure.
Comment:Note that this term can be used to annotate gene products that localize to a mitotic chromosome in an organism that undergoes an 'open mitosis' in which the nuclear envelope breaks down during mitosis.
Synonyms:related_synonym: cytoplasmic mitotic chromosome;   metaphase chromosome;   mitotic chromosome


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condensed chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8 A-kinase anchoring protein 8 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:5,123,988...5,142,326
Ensembl chrNW_004936596:5,124,083...5,142,027
JBrowse link
G Banf1 barrier to autointegration nuclear assembly factor 1 located_in
is_active_in
ISO
IEA
(PMID:28841419) RGD
TreeGrafter
UniProt
PMID:10393804 PMID:28841419 GO_REF:0000118 RGD:10054037 NCBI chrNW_004936599:3,553,190...3,555,167
Ensembl chrNW_004936599:3,553,193...3,555,162
JBrowse link
G Banf2 BANF family member 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:2,375,595...2,385,384
Ensembl chrNW_004936485:2,375,509...2,385,384
JBrowse link
G Baz1b bromodomain adjacent to zinc finger domain 1B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,713,575...2,779,947
Ensembl chrNW_004936543:2,713,589...2,779,993
JBrowse link
G Brca1 BRCA1 DNA repair associated located_in ISO (PMID:12913077) MGI PMID:12913077 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G Cdk2 cyclin dependent kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:379,849...385,648
Ensembl chrNW_004936646:379,842...385,877
JBrowse link
G Champ1 chromosome alignment maintaining phosphoprotein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937030:268,400...279,341
Ensembl chrNW_004937030:274,074...276,515
JBrowse link
G Ctcf CCCTC-binding factor located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:17,987,137...18,031,733
Ensembl chrNW_004936475:17,987,156...18,031,760
JBrowse link
G Esrrb estrogen related receptor beta located_in ISO (PMID:27723719) UniProt PMID:27723719 NCBI chrNW_004936488:5,350,133...5,452,366
Ensembl chrNW_004936488:5,292,466...5,454,689
JBrowse link
G Fancd2 FA complementation group D2 located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936602:3,162,177...3,220,468
Ensembl chrNW_004936602:3,161,960...3,209,868
JBrowse link
G Gtf2b general transcription factor IIB located_in
is_active_in
IEA
ISO
(PMID:24244602) Ensembl
MGI
PMID:24244602 GO_REF:0000107 NCBI chrNW_004936732:148,702...178,992
Ensembl chrNW_004936732:148,369...183,067
JBrowse link
G Hmbs hydroxymethylbilane synthase located_in ISO strong staining of metaphase and anaphase chromatids RGD PMID:12917623 RGD:2301689 NCBI chrNW_004936542:4,037,888...4,046,089
Ensembl chrNW_004936542:4,037,201...4,050,810
JBrowse link
G Hmgb1 high mobility group box 1 located_in ISO (PMID:12925773) UniProt PMID:12925773 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580
JBrowse link
G Hmgb2 high mobility group box 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936516:4,536,664...4,539,331
Ensembl chrNW_004936516:4,534,306...4,539,387
JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 located_in ISO (PMID:10445843) UniProt PMID:10445843 NCBI chrNW_004936530:3,038,873...3,069,724
Ensembl chrNW_004936530:3,038,847...3,069,494
JBrowse link
G Lig4 DNA ligase 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
JBrowse link
G LOC101959186 barrier-to-autointegration factor-like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936683:183,574...184,237 JBrowse link
G LOC101962206 histone-lysine N-methyltransferase SETMAR located_in ISO (PMID:18790802) UniProt PMID:18790802 NCBI chrNW_004936577:3,761,078...3,771,864 JBrowse link
G LOC101971629 core histone macro-H2A.1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:2,496,489...2,556,352
Ensembl chrNW_004936597:2,495,862...2,556,603
JBrowse link
G LOC101972657 aurora kinase C located_in ISO (PMID:15670791) UniProt PMID:15670791 NCBI chrNW_004937055:14,992...17,802 JBrowse link
G LOC101972766 tubulin alpha-1A chain is_active_in ISO (PMID:24244602) MGI PMID:24244602 NCBI chrNW_004936512:6,959,656...6,964,299
Ensembl chrNW_004936512:6,958,985...6,964,299
JBrowse link
G Mki67 marker of proliferation Ki-67 is_active_in
located_in
ISO (PMID:27362226), (PMID:28935370), (PMID:32879492), (PMID:35513709), (PMID:39153474)
(PMID:12355204)
UniProt
MGI
PMID:12355204 PMID:27362226 PMID:28935370 PMID:32879492 PMID:35513709 More... NCBI chrNW_004936486:15,561,327...15,587,109 JBrowse link
G Mlh1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Mlh3 mutL homolog 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:4,164,322...4,195,408
Ensembl chrNW_004936488:4,164,918...4,195,517
JBrowse link
G Msh4 mutS homolog 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936571:2,827,283...2,898,562
Ensembl chrNW_004936571:2,822,058...2,898,562
JBrowse link
G Nanog Nanog homeobox NOT|located_in ISO (PMID:27723719) UniProt PMID:27723719 NCBI chrNW_004936892:181,834...187,691 JBrowse link
G Ncapd2 non-SMC condensin I complex subunit D2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:1,250,442...1,275,823
Ensembl chrNW_004936709:1,250,495...1,275,769
JBrowse link
G Ncapd3 non-SMC condensin II complex subunit D3 located_in ISO (PMID:21795393) MGI PMID:21795393 NCBI chrNW_004936684:1,618,271...1,687,905
Ensembl chrNW_004936684:1,616,974...1,692,235
JBrowse link
G Ncapg non-SMC condensin I complex subunit G located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936477:10,408,347...10,445,361
Ensembl chrNW_004936477:10,405,997...10,445,206
JBrowse link
G Ncaph2 non-SMC condensin II complex subunit H2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:320,885...327,290
Ensembl chrNW_004936629:321,011...327,607
JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase located_in ISO (PMID:10601332) MGI PMID:10601332 NCBI chrNW_004936523:1,492,795...1,786,942
Ensembl chrNW_004936523:1,493,450...1,750,524
JBrowse link
G Pes1 pescadillo ribosomal biogenesis factor 1 located_in ISO (PMID:12237316) MGI PMID:12237316 NCBI chrNW_004936904:125,922...140,559
Ensembl chrNW_004936904:126,003...140,235
JBrowse link
G Rad51 RAD51 recombinase located_in ISO (PMID:10809667), (PMID:12091911), (PMID:12591952), (PMID:12913077), (PMID:17291760) MGI PMID:10809667 PMID:12091911 PMID:12591952 PMID:12913077 PMID:17291760 NCBI chrNW_004936471:4,119,020...4,136,811
Ensembl chrNW_004936471:4,114,530...4,136,248
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:369,366...375,243
Ensembl chrNW_004936722:369,423...375,243
JBrowse link
G Rif1 replication timing regulatory factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:26,045,500...26,105,980
Ensembl chrNW_004936469:26,048,953...26,105,997
JBrowse link
G Rpa1 replication protein A1 located_in ISO (PMID:12091911) MGI PMID:12091911 NCBI chrNW_004936538:7,941,074...7,997,062
Ensembl chrNW_004936538:7,946,403...7,994,864
JBrowse link
G Smarca5 SNF2 related chromatin remodeling ATPase 5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:4,857,816...4,890,266
Ensembl chrNW_004936535:4,856,672...4,890,225
JBrowse link
G Smc2 structural maintenance of chromosomes 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936793:909,663...958,883
Ensembl chrNW_004936793:910,654...958,811
JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in ISO (PMID:10809667), (PMID:12091911), (PMID:12591952), (PMID:17784788), (PMID:19625504) MGI PMID:10809667 PMID:12091911 PMID:12591952 PMID:17784788 PMID:19625504 NCBI chrNW_004936492:12,316,868...12,326,778
Ensembl chrNW_004936492:12,316,869...12,330,251
JBrowse link
G Top2a DNA topoisomerase II alpha located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,441,463...15,465,692
Ensembl chrNW_004936490:15,441,575...15,466,978
JBrowse link
G Top3b DNA topoisomerase III beta located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:1,756,829...1,782,063
Ensembl chrNW_004936619:1,756,791...1,785,953
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 NOT|located_in ISO (PMID:12589063) UniProt PMID:12589063 NCBI chrNW_004936469:2,248,367...2,495,215
Ensembl chrNW_004936469:2,248,039...2,495,226
JBrowse link
central element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUNH14orf39 chromosome unknown C14orf39 homolog located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936495:4,660,616...4,695,338
Ensembl chrNW_004936495:4,660,641...4,694,402
JBrowse link
G Incenp inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:999,148...1,028,157
Ensembl chrNW_004936581:999,497...1,025,062
JBrowse link
G Syce1 synaptonemal complex central element protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:19,723,354...19,731,175
Ensembl chrNW_004936486:19,723,627...19,727,770
JBrowse link
G Syce2 synaptonemal complex central element protein 2 located_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936659:1,962,055...1,978,743
Ensembl chrNW_004936659:1,961,243...1,978,743
JBrowse link
G Syce3 synaptonemal complex central element protein 3 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936629:264,077...281,119
Ensembl chrNW_004936629:264,077...281,119
JBrowse link
G Sycp1 synaptonemal complex protein 1 located_in ISO (PMID:12584241), (PMID:23133398) MGI PMID:12584241 PMID:23133398 NCBI chrNW_004936627:239,232...365,062 JBrowse link
G Tex11 testis expressed 11 located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936762:681,962...969,749
Ensembl chrNW_004936762:681,130...969,455
JBrowse link
G Tex12 testis expressed 12 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936612:2,297,754...2,303,130 JBrowse link
checkpoint clamp complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hus1 HUS1 checkpoint clamp component part_of IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936478:22,393,952...22,414,349
Ensembl chrNW_004936478:22,400,111...22,414,115
JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease part_of IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936518:6,620,325...6,626,328
Ensembl chrNW_004936518:6,620,325...6,628,393
JBrowse link
G Rad9a RAD9 checkpoint clamp component A part_of IEA Ensembl
InterPro
UniProt
TreeGrafter
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936599:2,348,869...2,353,907
Ensembl chrNW_004936599:2,345,646...2,354,029
JBrowse link
G Rad9b RAD9 checkpoint clamp component B part_of IEA UniProt
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936558:3,462,187...3,489,741
Ensembl chrNW_004936558:3,459,223...3,489,413
JBrowse link
chiasma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Mlh3 mutL homolog 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:4,164,322...4,195,408
Ensembl chrNW_004936488:4,164,918...4,195,517
JBrowse link
condensed chromosome, centromeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX chromatin remodeler located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936683:2,496,307...2,718,539
Ensembl chrNW_004936683:2,495,959...2,718,620
JBrowse link
G Aurkb aurora kinase B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,435,601...1,437,423
Ensembl chrNW_004936595:1,435,852...1,440,351
JBrowse link
G Cbx3 chromobox 3 located_in ISO (PMID:11124534) UniProt PMID:11124534 NCBI chrNW_004936478:2,981,218...2,989,329
Ensembl chrNW_004936478:2,981,228...2,989,324
JBrowse link
G Cenpa centromere protein A located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:5,715,274...5,720,816
Ensembl chrNW_004936493:5,714,782...5,720,837
JBrowse link
G Cenpb centromere protein B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:14,914,644...14,917,265
Ensembl chrNW_004936485:14,914,644...14,916,458
JBrowse link
G Cenpc centromere protein C located_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936582:920,852...978,167
Ensembl chrNW_004936582:920,833...981,373
JBrowse link
G Cenpe centromere protein E located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:188,601...265,904
Ensembl chrNW_004936520:188,628...265,733
JBrowse link
G Kmt5b lysine methyltransferase 5B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:1,928,172...1,983,983
Ensembl chrNW_004936599:1,928,145...1,984,008
JBrowse link
G Kmt5c lysine methyltransferase 5C located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936886:596,949...602,959
Ensembl chrNW_004936886:595,782...604,286
JBrowse link
G Meikin meiotic kinetochore factor located_in ISO (PMID:25533956) MGI PMID:25533956 NCBI chrNW_004936647:3,218,383...3,270,571 JBrowse link
G Ncapd2 non-SMC condensin I complex subunit D2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936709:1,250,442...1,275,823
Ensembl chrNW_004936709:1,250,495...1,275,769
JBrowse link
G Ncapd3 non-SMC condensin II complex subunit D3 located_in IEA UniProt
TreeGrafter
GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936684:1,618,271...1,687,905
Ensembl chrNW_004936684:1,616,974...1,692,235
JBrowse link
G Ncapg non-SMC condensin I complex subunit G located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:10,408,347...10,445,361
Ensembl chrNW_004936477:10,405,997...10,445,206
JBrowse link
G Plk1 polo like kinase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:8,321,415...8,332,414
Ensembl chrNW_004936501:8,321,305...8,332,424
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:369,366...375,243
Ensembl chrNW_004936722:369,423...375,243
JBrowse link
G Sgo1 shugoshin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:12,425,026...12,436,900
Ensembl chrNW_004936473:12,425,780...12,436,899
JBrowse link
G Sgo2 shugoshin 2 located_in ISO (PMID:18084284), (PMID:18765791), (PMID:19283064), (PMID:25533956) MGI PMID:18084284 PMID:18765791 PMID:19283064 PMID:25533956 NCBI chrNW_004936825:350,390...373,005
Ensembl chrNW_004936825:341,283...373,012
JBrowse link
G Ss18l1 SS18L1 subunit of BAF chromatin remodeling complex located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:9,820,449...9,839,341
Ensembl chrNW_004936514:9,821,319...9,839,475
JBrowse link
G Sycp2l synaptonemal complex protein 2 like located_in ISO (PMID:26362258) UniProt
MGI
PMID:26362258 NCBI chrNW_004936534:2,024,341...2,131,241 JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in ISO (PMID:22854038) MGI PMID:22854038 NCBI chrNW_004936492:12,316,868...12,326,778
Ensembl chrNW_004936492:12,316,869...12,330,251
JBrowse link
condensed nuclear chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Add3 adducin 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:928,956...1,042,168
Ensembl chrNW_004936486:928,522...1,043,084
JBrowse link
G Brca1 BRCA1 DNA repair associated located_in ISO (PMID:20551173), (PMID:26490168) MGI PMID:20551173 PMID:26490168 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G Brd4 bromodomain containing 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:5,176,682...5,246,102
Ensembl chrNW_004936596:5,177,147...5,246,518
JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 located_in ISO (PMID:24891606) MGI PMID:24891606 NCBI chrNW_004936877:523,022...528,387 JBrowse link
G Cdx2 caudal type homeobox 2 located_in ISO (PMID:15509711) MGI PMID:15509711 NCBI chrNW_004936472:23,137,936...23,141,205 JBrowse link
G Chek1 checkpoint kinase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936743:2,004,535...2,027,287
Ensembl chrNW_004936743:2,005,851...2,026,587
JBrowse link
G Chmp1a charged multivesicular body protein 1A located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:366,563...376,303
Ensembl chrNW_004936641:366,569...376,337
JBrowse link
G Dmc1 DNA meiotic recombinase 1 located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936492:2,754,694...2,788,249
Ensembl chrNW_004936492:2,753,289...2,788,102
JBrowse link
G Dnmt3l DNA methyltransferase 3 like located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:143,078...160,318
Ensembl chrNW_004936500:143,078...160,212
JBrowse link
G H1-6 H1.6 linker histone, cluster member located_in ISO (PMID:18316482) MGI PMID:18316482 NCBI chrNW_004936671:1,954,740...1,956,298
Ensembl chrNW_004936671:1,955,327...1,955,962
JBrowse link
G Hormad1 HORMA domain containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:933,123...956,201
Ensembl chrNW_004936580:933,365...954,486
JBrowse link
G Iho1 interactor of HORMAD1 1 located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:905,692...929,896
Ensembl chrNW_004936529:889,423...929,929
JBrowse link
G Kifap3 kinesin associated protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:16,664,025...16,777,440
Ensembl chrNW_004936481:16,663,974...16,779,428
JBrowse link
G Lig3 DNA ligase 3 located_in ISO (PMID:9001252) MGI PMID:9001252 NCBI chrNW_004936538:206,179...228,487
Ensembl chrNW_004936538:206,839...226,441
JBrowse link
G LOC101966907 histone H2AX located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,046,930...4,049,017
Ensembl chrNW_004936542:4,047,915...4,048,346
JBrowse link
G LOC101969275 tubulin gamma-1 chain located_in ISO (PMID:15007207) UniProt PMID:15007207 NCBI chrNW_004936490:17,357,782...17,363,006
Ensembl chrNW_004936490:17,357,608...17,398,008
JBrowse link
G LOC101975928 protein argonaute-3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:18,479,811...18,552,457
Ensembl chrNW_004936474:18,443,453...18,552,143
JBrowse link
G Lrpprc leucine rich pentatricopeptide repeat containing located_in ISO (PMID:12762840) HGNC-UCL PMID:12762840 NCBI chrNW_004936508:7,961,079...8,068,228 JBrowse link
G Mlh1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Mlh3 mutL homolog 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:4,164,322...4,195,408
Ensembl chrNW_004936488:4,164,918...4,195,517
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease ISO sex vesicles/chromatin of XY bivalent RGD PMID:10855503 RGD:2300257 NCBI chrNW_004936674:466,495...528,072
Ensembl chrNW_004936674:466,456...530,317
JBrowse link
G Msh4 mutS homolog 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936571:2,827,283...2,898,562
Ensembl chrNW_004936571:2,822,058...2,898,562
JBrowse link
G Ncapd2 non-SMC condensin I complex subunit D2 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chrNW_004936709:1,250,442...1,275,823
Ensembl chrNW_004936709:1,250,495...1,275,769
JBrowse link
G Ncapd3 non-SMC condensin II complex subunit D3 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chrNW_004936684:1,618,271...1,687,905
Ensembl chrNW_004936684:1,616,974...1,692,235
JBrowse link
G Ncapg non-SMC condensin I complex subunit G located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:10,408,347...10,445,361
Ensembl chrNW_004936477:10,405,997...10,445,206
JBrowse link
G Ncapg2 non-SMC condensin II complex subunit G2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936856:567,765...625,745
Ensembl chrNW_004936856:567,306...625,800
JBrowse link
G Ncaph non-SMC condensin I complex subunit H located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936744:440,958...468,964
Ensembl chrNW_004936744:440,956...468,972
JBrowse link
G Ncaph2 non-SMC condensin II complex subunit H2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:320,885...327,290
Ensembl chrNW_004936629:321,011...327,607
JBrowse link
G Nek2 NIMA related kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:1,683,027...1,695,410
Ensembl chrNW_004936557:1,682,984...1,695,414
JBrowse link
G Nifk nucleolar protein interacting with the FHA domain of MKI67 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:48,984,370...49,003,058
Ensembl chrNW_004936469:48,994,003...49,005,522
JBrowse link
G Nol6 nucleolar protein 6 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:1,981,832...1,997,153
Ensembl chrNW_004936524:1,982,898...1,997,054
JBrowse link
G Psmc3ip PSMC3 interacting protein located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:17,328,195...17,333,700
Ensembl chrNW_004936490:17,328,494...17,333,657
JBrowse link
G Rad21 RAD21 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:29,377,793...29,403,422
Ensembl chrNW_004936470:29,377,734...29,407,312
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:17,413,006...17,435,951
Ensembl chrNW_004936485:17,413,006...17,435,951
JBrowse link
G Rad50 RAD50 double strand break repair protein located_in IEA
ISO
sex vesicles/chromatin of XY bivalent TreeGrafter
RGD
PMID:10855503 GO_REF:0000118 RGD:2300257 NCBI chrNW_004936647:2,546,100...2,637,524
Ensembl chrNW_004936647:2,543,599...2,637,846
JBrowse link
G Rad51 RAD51 recombinase located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:4,119,020...4,136,811
Ensembl chrNW_004936471:4,114,530...4,136,248
JBrowse link
G Rcc1 regulator of chromosome condensation 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,635,175...12,646,907
Ensembl chrNW_004936474:12,635,175...12,647,231
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:369,366...375,243
Ensembl chrNW_004936722:369,423...375,243
JBrowse link
G Rpa1 replication protein A1 located_in ISO (PMID:18283110), (PMID:18316482), (PMID:20551173), (PMID:22164254) MGI PMID:18283110 PMID:18316482 PMID:20551173 PMID:22164254 NCBI chrNW_004936538:7,941,074...7,997,062
Ensembl chrNW_004936538:7,946,403...7,994,864
JBrowse link
G Rrs1 ribosome biogenesis regulator 1 homolog located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:7,563,989...7,565,663
Ensembl chrNW_004936496:7,564,459...7,565,556
JBrowse link
G Rsph1 radial spoke head component 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:1,402,289...1,423,398
Ensembl chrNW_004936500:1,402,219...1,423,509
JBrowse link
G Shoc1 shortage in chiasmata 1 located_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936559:1,616,910...1,671,678
Ensembl chrNW_004936559:1,612,615...1,671,648
JBrowse link
G Smc1b structural maintenance of chromosomes 1B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:4,315,401...4,389,318
Ensembl chrNW_004936629:4,315,401...4,389,069
JBrowse link
G Smc2 structural maintenance of chromosomes 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936793:909,663...958,883
Ensembl chrNW_004936793:910,654...958,811
JBrowse link
G Smc4 structural maintenance of chromosomes 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936708:362,605...395,217
Ensembl chrNW_004936708:362,603...395,246
JBrowse link
G Stag3 STAG3 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:430,804...458,112
Ensembl chrNW_004936543:432,552...458,112
JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,609,444...2,629,050
Ensembl chrNW_004936492:2,609,406...2,626,564
JBrowse link
G Sycp1 synaptonemal complex protein 1 located_in ISO (PMID:22854038), (PMID:22863743), (PMID:24589552), (PMID:24891606) MGI PMID:22854038 PMID:22863743 PMID:24589552 PMID:24891606 NCBI chrNW_004936627:239,232...365,062 JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in ISO (PMID:18316482), (PMID:21621532), (PMID:22863743), (PMID:24589552), (PMID:24891606) MGI PMID:18316482 PMID:21621532 PMID:22863743 PMID:24589552 PMID:24891606 NCBI chrNW_004936492:12,316,868...12,326,778
Ensembl chrNW_004936492:12,316,869...12,330,251
JBrowse link
G Tex11 testis expressed 11 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:681,962...969,749
Ensembl chrNW_004936762:681,130...969,455
JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:6,788,713...6,841,824
Ensembl chrNW_004936529:6,788,187...6,841,888
JBrowse link
G Ttn titin located_in ISO (PMID:9548712) BHF-UCL PMID:9548712 NCBI chrNW_004936509:7,733,426...7,999,503 JBrowse link
inner kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpc centromere protein C part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936582:920,852...978,167
Ensembl chrNW_004936582:920,833...981,373
JBrowse link
G Cenph centromere protein H part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:379,172...396,167
Ensembl chrNW_004936480:379,183...396,167
JBrowse link
G Cenpi centromere protein I part_of IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936813:171,187...224,442
Ensembl chrNW_004936813:172,894...244,881
JBrowse link
G Cenpk centromere protein K part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:3,621,758...3,645,968
Ensembl chrNW_004936480:3,624,143...3,645,884
JBrowse link
G Cenpl centromere protein L part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:14,052,816...14,063,066
Ensembl chrNW_004936481:14,052,810...14,064,101
JBrowse link
G Cenpm centromere protein M part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:75,196...88,446
Ensembl chrNW_004936492:75,238...87,912
JBrowse link
G Cenpn centromere protein N part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004936475:28,683,233...28,702,466 JBrowse link
G Cenpo centromere protein O part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:7,333,387...7,351,368
Ensembl chrNW_004936493:7,334,617...7,352,421
JBrowse link
G Cenpp centromere protein P part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:1,977,595...2,199,276
Ensembl chrNW_004936487:1,977,341...2,199,216
JBrowse link
G Cenpq centromere protein Q part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:11,189,336...11,208,154
Ensembl chrNW_004936476:11,190,535...11,201,011
JBrowse link
G Cenpt centromere protein T part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:18,198,725...18,204,257
Ensembl chrNW_004936475:18,198,733...18,203,963
JBrowse link
G Cenpu centromere protein U part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:4,497,675...4,536,274
Ensembl chrNW_004936554:4,500,486...4,536,239
JBrowse link
G Cenpw centromere protein W part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936639:3,173,832...3,184,439
Ensembl chrNW_004936639:3,173,385...3,184,454
JBrowse link
G Cenpx centromere protein X part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:5,517,665...5,520,606
Ensembl chrNW_004936594:5,516,915...5,520,553
JBrowse link
G Itgb3bp integrin subunit beta 3 binding protein part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936692:1,040,894...1,091,741
Ensembl chrNW_004936692:1,038,790...1,091,660
JBrowse link
G LOC101959362 peroxisomal membrane protein PEX14 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:4,313,186...4,462,462
Ensembl chrNW_004936623:4,313,147...4,462,528
Ensembl chrNW_004936623:4,313,147...4,462,528
JBrowse link
G LOC101963041 histone H3.3A part_of ISO (PMID:25645018) MGI PMID:25645018 NCBI chrNW_004936526:2,835,002...2,842,328 JBrowse link
G Orc2 origin recognition complex subunit 2 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936726:215,483...259,867
Ensembl chrNW_004936726:211,859...255,754
JBrowse link
kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahctf1 AT-hook containing transcription factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:4,143,002...4,209,689
Ensembl chrNW_004936526:4,142,566...4,209,791
JBrowse link
G Anapc16 anaphase promoting complex subunit 16 located_in IEA TreeGrafter
UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936521:6,680,119...6,696,661
Ensembl chrNW_004936521:6,678,755...6,697,488
JBrowse link
G Apc APC regulator of WNT signaling pathway located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:6,899,580...7,019,016
Ensembl chrNW_004936531:6,899,788...7,019,453
JBrowse link
G Aurkb aurora kinase B part_of
is_active_in
located_in
ISO
IEA
(PMID:22024163)
(PMID:26829474)
CACAO
UniProt
Ensembl
PMID:22024163 PMID:26829474 GO_REF:0000107 NCBI chrNW_004936595:1,435,601...1,437,423
Ensembl chrNW_004936595:1,435,852...1,440,351
JBrowse link
G Birc5 baculoviral IAP repeat containing 5 located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936594:2,812,165...2,820,618
Ensembl chrNW_004936594:2,812,238...2,820,636
JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936471:3,631,760...3,696,024
Ensembl chrNW_004936471:3,633,536...3,695,684
JBrowse link
G Bub3 BUB3 mitotic checkpoint protein located_in ISO (PMID:35167144)
(PMID:9660858)
UniProt PMID:9660858 PMID:35167144 NCBI chrNW_004936486:11,796,066...11,807,826 JBrowse link
G Cbx5 chromobox 5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:11,441,770...11,480,924
Ensembl chrNW_004936512:11,450,060...11,480,727
JBrowse link
G Cdc20 cell division cycle 20 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:24,760,258...24,765,069
Ensembl chrNW_004936474:24,760,298...24,767,725
JBrowse link
G Cdt1 chromatin licensing and DNA replication factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:916,695...925,411
Ensembl chrNW_004936641:917,435...920,981
JBrowse link
G Cenpc centromere protein C located_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936582:920,852...978,167
Ensembl chrNW_004936582:920,833...981,373
JBrowse link
G Cenpe centromere protein E located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:188,601...265,904
Ensembl chrNW_004936520:188,628...265,733
JBrowse link
G Cenpf centromere protein F located_in
NOT|located_in
IEA
ISO
(PMID:10373470) Ensembl
MGI
PMID:10373470 GO_REF:0000107 NCBI chrNW_004936628:3,642,281...3,695,262
Ensembl chrNW_004936628:3,643,000...3,695,221
JBrowse link
G Cenph centromere protein H located_in IEA TreeGrafter
Ensembl
InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936480:379,172...396,167
Ensembl chrNW_004936480:379,183...396,167
JBrowse link
G Cenpi centromere protein I located_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936813:171,187...224,442
Ensembl chrNW_004936813:172,894...244,881
JBrowse link
G Cenpo centromere protein O located_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936493:7,333,387...7,351,368
Ensembl chrNW_004936493:7,334,617...7,352,421
JBrowse link
G Cenpt centromere protein T located_in IEA Ensembl
InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936475:18,198,725...18,204,257
Ensembl chrNW_004936475:18,198,733...18,203,963
JBrowse link
G Cenpv centromere protein V located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936821:267,137...276,969
Ensembl chrNW_004936821:267,178...276,401
JBrowse link
G Cenpw centromere protein W located_in IEA Ensembl
UniProt
TreeGrafter
GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936639:3,173,832...3,184,439
Ensembl chrNW_004936639:3,173,385...3,184,454
JBrowse link
G Cfdp1 craniofacial development protein 1 located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936475:24,053,558...24,164,674
Ensembl chrNW_004936475:24,052,963...24,164,679
JBrowse link
G Champ1 chromosome alignment maintaining phosphoprotein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937030:268,400...279,341
Ensembl chrNW_004937030:274,074...276,515
JBrowse link
G Chmp1a charged multivesicular body protein 1A located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:366,563...376,303
Ensembl chrNW_004936641:366,569...376,337
JBrowse link
G Chmp1b charged multivesicular body protein 1B located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004936626:391,942...394,440 JBrowse link
G Chmp2a charged multivesicular body protein 2A located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004937062:133,361...136,329 JBrowse link
G Chmp2b charged multivesicular body protein 2B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936610:2,282,925...2,320,554
Ensembl chrNW_004936610:2,281,066...2,321,211
JBrowse link
G Chmp3 charged multivesicular body protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:1,023,994...1,044,727
Ensembl chrNW_004936712:1,023,989...1,044,728
JBrowse link
G Chmp4a charged multivesicular body protein 4A located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:341,066...344,928
Ensembl chrNW_004936722:341,307...345,104
JBrowse link
G Chmp4b charged multivesicular body protein 4B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:6,756,360...6,798,964
Ensembl chrNW_004936561:6,756,307...6,799,290
JBrowse link
G Chmp4c charged multivesicular body protein 4C located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936656:2,531,654...2,558,106
Ensembl chrNW_004936656:2,531,576...2,558,106
JBrowse link
G Chmp5 charged multivesicular body protein 5 located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004936524:1,804,643...1,820,491 JBrowse link
G Chmp6 charged multivesicular body protein 6 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:4,769,409...4,775,186
Ensembl chrNW_004936594:4,769,466...4,774,293
JBrowse link
G Chmp7 charged multivesicular body protein 7 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,730,284...6,757,816
Ensembl chrNW_004936555:6,745,738...6,756,467
JBrowse link
G Ckap5 cytoskeleton associated protein 5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:2,269,341...2,369,098
Ensembl chrNW_004936562:2,269,332...2,371,224
JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 located_in ISO
IEA
MMO:0000538 RGD
TreeGrafter
UniProt
PMID:28351621 GO_REF:0000043 GO_REF:0000118 RGD:27096077 NCBI chrNW_004936469:49,067,357...49,335,212
Ensembl chrNW_004936469:49,067,012...49,335,219
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936473:23,756,291...23,940,966
Ensembl chrNW_004936473:23,755,627...23,900,014
JBrowse link
G Dctn1 dynactin subunit 1 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936556:601,550...632,321
Ensembl chrNW_004936556:601,548...621,609
JBrowse link
G Dctn2 dynactin subunit 2 located_in ISO
IEA
RGD
Ensembl
PMID:8647893 GO_REF:0000107 RGD:1331348 NCBI chrNW_004936646:1,678,678...1,695,142
Ensembl chrNW_004936646:1,678,678...1,695,142
JBrowse link
G Dctn4 dynactin subunit 4 ISO RGD PMID:10607597 RGD:70710 NCBI chrNW_004936504:4,252,442...4,285,151
Ensembl chrNW_004936504:4,252,431...4,285,151
JBrowse link
G Dctn6 dynactin subunit 6 located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936792:69,893...89,645
Ensembl chrNW_004936792:69,125...90,110
JBrowse link
G Dsn1 DSN1 component of MIS12 kinetochore complex located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:4,322,709...4,337,405
Ensembl chrNW_004936561:4,322,675...4,337,506
JBrowse link
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936585:4,232,428...4,496,878
Ensembl chrNW_004936585:4,231,711...4,527,145
JBrowse link
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 located_in ISO
IEA
RGD
Ensembl
PMID:21169557 GO_REF:0000107 RGD:13207422 NCBI chrNW_004936473:23,011,888...23,042,497
Ensembl chrNW_004936473:23,009,351...23,042,439
JBrowse link
G Dync1li2 dynein cytoplasmic 1 light intermediate chain 2 ISO RGD PMID:21169557 RGD:13207422 NCBI chrNW_004936475:17,012,911...17,036,290
Ensembl chrNW_004936475:17,012,832...17,036,392
JBrowse link
G Dynll1 dynein light chain LC8-type 1 located_in ISO (PMID:20133940) UniProt PMID:20133940 NCBI chrNW_004936668:451,846...484,841
Ensembl chrNW_004936668:448,489...500,800
JBrowse link
G Dynlt3 dynein light chain Tctex-type 3 located_in ISO
IEA
RGD
UniProt
Ensembl
PMID:17289665 GO_REF:0000043 GO_REF:0000107 RGD:8554144 NCBI chrNW_004936502:4,690,810...4,701,615
Ensembl chrNW_004936502:4,690,776...4,701,750
JBrowse link
G Fbxo28 F-box protein 28 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:1,090,983...1,124,256
Ensembl chrNW_004936526:1,090,706...1,124,639
JBrowse link
G Firrm FIGNL1 interacting regulator of recombination and mitosis located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:16,828,810...16,863,108
Ensembl chrNW_004936481:16,828,944...16,860,447
JBrowse link
G Gpatch11 G-patch domain containing 11 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936663:1,167,105...1,177,197
Ensembl chrNW_004936663:1,167,025...1,177,226
JBrowse link
G Gtf2b general transcription factor IIB located_in
is_active_in
IEA
ISO
(PMID:24244602) Ensembl
MGI
PMID:24244602 GO_REF:0000107 NCBI chrNW_004936732:148,702...178,992
Ensembl chrNW_004936732:148,369...183,067
JBrowse link
G Hjurp Holliday junction recognition protein located_in ISO (PMID:19410545) UniProt PMID:19410545 NCBI chrNW_004936525:3,528,379...3,544,088 JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U located_in ISO (PMID:21242313) UniProt PMID:21242313 NCBI chrNW_004936526:6,014,745...6,022,213 JBrowse link
G Hsf1 heat shock transcription factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:7,927,734...7,950,805
Ensembl chrNW_004936470:7,928,095...7,933,337
JBrowse link
G Incenp inner centromere protein located_in IEA TreeGrafter
UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936581:999,148...1,028,157
Ensembl chrNW_004936581:999,497...1,025,062
JBrowse link
G Itgb3bp integrin subunit beta 3 binding protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936692:1,040,894...1,091,741
Ensembl chrNW_004936692:1,038,790...1,091,660
JBrowse link
G Kat2b lysine acetyltransferase 2B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:12,341,545...12,415,637
Ensembl chrNW_004936473:12,344,343...12,417,875
JBrowse link
G Kat5 lysine acetyltransferase 5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,767,526...3,775,416
Ensembl chrNW_004936599:3,766,242...3,776,128
JBrowse link
G Kat8 lysine acetyltransferase 8 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:13,475,676...13,487,617
Ensembl chrNW_004936501:13,474,735...13,489,341
JBrowse link
G Kif18a kinesin family member 18A located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936533:9,173,739...9,242,928
Ensembl chrNW_004936533:9,173,715...9,239,931
JBrowse link
G Kif2c kinesin family member 2C located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936474:25,967,095...26,000,678
Ensembl chrNW_004936474:25,978,707...26,000,140
JBrowse link
G Knl1 kinetochore scaffold 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:4,079,877...4,110,205
Ensembl chrNW_004936471:4,059,995...4,109,413
JBrowse link
G Knstrn kinetochore localized astrin (SPAG5) binding protein located_in IEA TreeGrafter
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:3,838,507...3,849,521
Ensembl chrNW_004936471:3,838,612...3,848,751
JBrowse link
G LOC101974646 nuclear distribution protein nudE-like 1 located_in IEA TreeGrafter
UniProt
GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936496:7,323,455...7,325,655 JBrowse link
G LOC101978306 polyamine-modulated factor 1 located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936580:5,454,574...5,479,600
Ensembl chrNW_004936580:5,454,580...5,479,884
JBrowse link
G Lrwd1 leucine rich repeats and WD repeat domain containing 1 located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936543:1,889,072...1,895,643
Ensembl chrNW_004936543:1,888,768...1,896,966
JBrowse link
G Mad1l1 mitotic arrest deficient 1 like 1 located_in ISO (PMID:17504913), (PMID:17938250), (PMID:21558374), (PMID:35167144)
(PMID:17363900), (PMID:20133940), (PMID:22351768), (PMID:22493223)
MGI
UniProt
PMID:17363900 PMID:17504913 PMID:17938250 PMID:20133940 PMID:21558374 More... NCBI chrNW_004936754:1,842,588...1,957,116 JBrowse link
G Mad2l1 mitotic arrest deficient 2 like 1 located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936662:92,421...98,531
Ensembl chrNW_004936662:92,328...99,517
JBrowse link
G Meaf6 MYST/Esa1 associated factor 6 located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936474:19,732,278...19,754,228
Ensembl chrNW_004936474:19,729,465...19,754,261
JBrowse link
G Meikin meiotic kinetochore factor located_in ISO (PMID:25533956) UniProt PMID:25533956 NCBI chrNW_004936647:3,218,383...3,270,571 JBrowse link
G Mis12 MIS12 kinetochore complex component located_in ISO (PMID:15371340) WB PMID:15371340 NCBI chrNW_004936677:2,323,540...2,328,689 JBrowse link
G Mtbp MDM2 binding protein located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936470:26,312,670...26,386,410
Ensembl chrNW_004936470:26,312,590...26,386,427
JBrowse link
G Mtcl1 microtubule crosslinking factor 1 located_in ISO (PMID:33587225) UniProt PMID:33587225 NCBI chrNW_004936670:2,388,839...2,516,758
Ensembl chrNW_004936670:2,388,908...2,516,875
JBrowse link
G Ncapd3 non-SMC condensin II complex subunit D3 located_in ISO (PMID:21795393) MGI PMID:21795393 NCBI chrNW_004936684:1,618,271...1,687,905
Ensembl chrNW_004936684:1,616,974...1,692,235
JBrowse link
G Ndc80 NDC80 kinetochore complex component located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936672:1,872,205...1,910,956
Ensembl chrNW_004936672:1,872,193...1,909,675
JBrowse link
G Nde1 nudE neurodevelopment protein 1 located_in IEA UniProt
TreeGrafter
Ensembl
GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:3,193,962...3,234,640
Ensembl chrNW_004936501:3,193,916...3,221,700
JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 located_in IEA TreeGrafter
UniProt
GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936595:1,656,956...1,692,775
Ensembl chrNW_004936595:1,656,956...1,689,322
JBrowse link
G Nek2 NIMA related kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:1,683,027...1,695,410
Ensembl chrNW_004936557:1,682,984...1,695,414
JBrowse link
G Nsl1 NSL1 component of MIS12 kinetochore complex located_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936557:773,805...806,095
Ensembl chrNW_004936557:773,146...807,223
JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex located_in IEA InterPro
UniProt
Ensembl
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936481:21,342,667...21,371,311
Ensembl chrNW_004936481:21,342,786...21,371,328
JBrowse link
G Nup107 nucleoporin 107 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:6,600,124...6,642,839
Ensembl chrNW_004936545:6,600,088...6,642,870
JBrowse link
G Nup133 nucleoporin 133 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:20,185,558...20,230,904
Ensembl chrNW_004936484:20,185,584...20,231,352
JBrowse link
G Nup160 nucleoporin 160 located_in ISO (PMID:15146057) UniProt PMID:15146057 NCBI chrNW_004936562:1,435,938...1,491,439
Ensembl chrNW_004936562:1,435,973...1,490,890
JBrowse link
G Nup37 nucleoporin 37 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:11,998,967...12,036,357
Ensembl chrNW_004936492:12,000,988...12,036,210
JBrowse link
G Nup43 nucleoporin 43 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:2,657,657...2,674,942
Ensembl chrNW_004936489:2,655,215...2,674,942
JBrowse link
G Nup85 nucleoporin 85 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:503,698...531,851
Ensembl chrNW_004936594:503,720...531,875
JBrowse link
G Nup98 nucleoporin 98 and 96 precursor located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:1,112,724...1,219,790
Ensembl chrNW_004936498:1,112,663...1,220,634
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:8,612,142...8,693,698
Ensembl chrNW_004936538:8,612,049...8,694,015
JBrowse link
G Pbrm1 polybromo 1 located_in ISO (PMID:14519686) MGI PMID:14519686 NCBI chrNW_004936473:3,382,618...3,476,049
Ensembl chrNW_004936473:3,382,260...3,476,052
JBrowse link
G Phf2 PHD finger protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:2,912,114...2,956,429
Ensembl chrNW_004936487:2,912,112...2,954,525
JBrowse link
G Pinx1 PIN2 (TERF1) interacting telomerase inhibitor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:2,641,851...2,706,201
Ensembl chrNW_004936675:2,640,068...2,706,238
JBrowse link
G Plk1 polo like kinase 1 located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:8,321,415...8,332,414
Ensembl chrNW_004936501:8,321,305...8,332,424
JBrowse link
G Plk2 polo like kinase 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936480:9,680,461...9,686,593
Ensembl chrNW_004936480:9,680,449...9,686,595
JBrowse link
G Plk3 polo like kinase 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:26,026,878...26,032,098
Ensembl chrNW_004936474:26,026,842...26,032,218
JBrowse link
G Plk5 polo like kinase 5 (inactive) located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936588:826,473...838,818 JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936558:3,631,794...3,651,754
Ensembl chrNW_004936558:3,630,561...3,651,786
JBrowse link
G Ppp1r12a protein phosphatase 1 regulatory subunit 12A located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936698:811,399...948,631
Ensembl chrNW_004936698:817,943...948,368
JBrowse link
G Prp4k pre-mRNA processing factor kinase PRP4K located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:8,379,386...8,418,963
Ensembl chrNW_004936534:8,382,485...8,418,938
JBrowse link
G Psen1 presenilin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065
JBrowse link
G Psen2 presenilin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:3,584,194...3,611,719
Ensembl chrNW_004936526:3,584,188...3,614,074
JBrowse link
G Rangap1 Ran GTPase activating protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:595,905...626,219
Ensembl chrNW_004936492:595,938...626,213
JBrowse link
G Rassf2 Ras association domain family member 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:13,997,688...14,042,712
Ensembl chrNW_004936485:13,997,652...14,042,578
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:369,366...375,243
Ensembl chrNW_004936722:369,423...375,243
JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936602:3,013,490...3,030,489
Ensembl chrNW_004936602:3,013,337...3,030,486
JBrowse link
G Seh1l SEH1 like nucleoporin located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936626:2,538,655...2,562,468
Ensembl chrNW_004936626:2,540,710...2,562,595
JBrowse link
G Septin7 septin 7 located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936478:11,419,334...11,528,954 JBrowse link
G Sgo1 shugoshin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:12,425,026...12,436,900
Ensembl chrNW_004936473:12,425,780...12,436,899
JBrowse link
G Sgo2 shugoshin 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936825:350,390...373,005
Ensembl chrNW_004936825:341,283...373,012
JBrowse link
G Sin3a SIN3 transcription regulator family member A located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:34,206,084...34,260,538
Ensembl chrNW_004936471:34,204,524...34,260,564
JBrowse link
G Ska1 spindle and kinetochore associated complex subunit 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:12,777,454...12,793,992
Ensembl chrNW_004936497:12,777,334...12,794,032
JBrowse link
G Ska2 spindle and kinetochore associated complex subunit 2 located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936490:4,119,050...4,157,491 JBrowse link
G Ska3 spindle and kinetochore associated complex subunit 3 located_in IEA TreeGrafter
UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936720:586,730...610,397
Ensembl chrNW_004936720:586,850...605,406
JBrowse link
G Smc1a structural maintenance of chromosomes 1A located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936751:332,351...388,756
Ensembl chrNW_004936751:349,597...388,755
JBrowse link
G Spag5 sperm associated antigen 5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,803,536...4,821,034
Ensembl chrNW_004936538:4,803,585...4,820,885
JBrowse link
G Spc24 SPC24 component of NDC80 kinetochore complex located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936659:1,308,089...1,315,449
Ensembl chrNW_004936659:1,308,083...1,315,450
JBrowse link
G Spc25 SPC25 component of NDC80 kinetochore complex located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936469:10,628,235...10,652,168
Ensembl chrNW_004936469:10,628,230...10,652,232
JBrowse link
G Spout1 SPOUT domain containing methyltransferase 1 located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936487:16,284,921...16,291,572
Ensembl chrNW_004936487:16,285,546...16,291,534
JBrowse link
G Ss18l1 SS18L1 subunit of BAF chromatin remodeling complex located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:9,820,449...9,839,341
Ensembl chrNW_004936514:9,821,319...9,839,475
JBrowse link
G Sugt1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936667:556,555...588,585
Ensembl chrNW_004936667:556,533...588,160
JBrowse link
G Tex14 testis expressed 14, intercellular bridge forming factor located_in ISO (PMID:22405274) UniProt PMID:22405274 NCBI chrNW_004936490:4,499,825...4,576,952 JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:6,589,395...6,668,242
Ensembl chrNW_004936471:6,589,564...6,668,305
JBrowse link
G Tpr translocated promoter region, nuclear basket protein NOT|located_in ISO
IEA
(PMID:19273613) UniProt
Ensembl
PMID:19273613 GO_REF:0000107 NCBI chrNW_004936481:4,050,693...4,111,682
Ensembl chrNW_004936481:4,050,794...4,111,682
JBrowse link
G Trappc12 trafficking protein particle complex subunit 12 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:1,613,181...1,674,556
Ensembl chrNW_004936532:1,613,966...1,674,914
JBrowse link
G Ttk TTK protein kinase located_in ISO (PMID:21558374) MGI PMID:21558374 NCBI chrNW_004936510:10,176,968...10,213,483 JBrowse link
G Xpo1 exportin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:6,921,753...6,962,062
Ensembl chrNW_004936491:6,921,319...6,962,343
JBrowse link
G Znf207 zinc finger protein 207 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936538:2,514,772...2,541,198
Ensembl chrNW_004936538:2,523,839...2,541,183
JBrowse link
G Znf276 zinc finger protein 276 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:305,423...332,312
Ensembl chrNW_004936641:320,143...332,424
JBrowse link
G Zw10 zw10 kinetochore protein located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936612:825,419...860,971
Ensembl chrNW_004936612:825,419...860,971
JBrowse link
G Zwilch zwilch kinetochore protein located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936471:26,642,321...26,674,475
Ensembl chrNW_004936471:26,642,352...26,677,684
JBrowse link
G Zwint ZW10 interacting kinetochore protein located_in ISO (PMID:26486467)
(PMID:11682612), (PMID:15485811)
UniProt
BHF-UCL
PMID:11682612 PMID:15485811 PMID:26486467 NCBI chrNW_004936693:1,539,987...1,551,685 JBrowse link
Knl1/Spc105 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Knl1 kinetochore scaffold 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:4,079,877...4,110,205
Ensembl chrNW_004936471:4,059,995...4,109,413
JBrowse link
G Zwint ZW10 interacting kinetochore protein part_of ISO (PMID:27881301) UniProt PMID:27881301 NCBI chrNW_004936693:1,539,987...1,551,685 JBrowse link
late recombination nodule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
lateral element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:16,194,092...16,295,803
Ensembl chrNW_004936483:16,194,092...16,255,905
JBrowse link
G Brca1 BRCA1 DNA repair associated located_in ISO (PMID:9774970) MGI PMID:9774970 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G Brca2 BRCA2 DNA repair associated located_in ISO (PMID:9774970) MGI PMID:9774970 NCBI chrNW_004936472:26,945,659...27,017,693 JBrowse link
G Dmc1 DNA meiotic recombinase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,754,694...2,788,249
Ensembl chrNW_004936492:2,753,289...2,788,102
JBrowse link
G Incenp inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:999,148...1,028,157
Ensembl chrNW_004936581:999,497...1,025,062
JBrowse link
G Kash5 KASH domain containing 5 located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936664:3,268,824...3,300,689
Ensembl chrNW_004936664:3,275,669...3,297,605
JBrowse link
G Mei4 meiotic double-stranded break formation protein 4 located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936510:12,063,763...12,208,789
Ensembl chrNW_004936510:12,063,763...12,208,799
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:17,413,006...17,435,951
Ensembl chrNW_004936485:17,413,006...17,435,951
JBrowse link
G Rad51 RAD51 recombinase located_in ISO (PMID:9774970)
(PMID:18694567), (PMID:21743440)
MGI PMID:9774970 PMID:18694567 PMID:21743440 NCBI chrNW_004936471:4,119,020...4,136,811
Ensembl chrNW_004936471:4,114,530...4,136,248
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:369,366...375,243
Ensembl chrNW_004936722:369,423...375,243
JBrowse link
G Rpa1 replication protein A1 located_in ISO (PMID:21743440), (PMID:22711701) MGI PMID:21743440 PMID:22711701 NCBI chrNW_004936538:7,941,074...7,997,062
Ensembl chrNW_004936538:7,946,403...7,994,864
JBrowse link
G Smc1a structural maintenance of chromosomes 1A ISO MMO:0000662 RGD PMID:10652260 RGD:1331378 NCBI chrNW_004936751:332,351...388,756
Ensembl chrNW_004936751:349,597...388,755
JBrowse link
G Smc1b structural maintenance of chromosomes 1B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:4,315,401...4,389,318
Ensembl chrNW_004936629:4,315,401...4,389,069
JBrowse link
G Smc3 structural maintenance of chromosomes 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:1,409,757...1,436,206
Ensembl chrNW_004936486:1,408,045...1,435,875
JBrowse link
G Stag3 STAG3 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:430,804...458,112
Ensembl chrNW_004936543:432,552...458,112
JBrowse link
G Sycp2 synaptonemal complex protein 2 located_in ISO PMID:9933407
(PMID:18283110), (PMID:22011390), (PMID:22711701), (PMID:23133398)
UniProt
MGI
PMID:9933407 PMID:18283110 PMID:22011390 PMID:22711701 PMID:23133398 RGD:11035335 NCBI chrNW_004936514:8,264,628...8,331,577 JBrowse link
G Sycp2l synaptonemal complex protein 2 like located_in ISO (PMID:26362258) MGI PMID:26362258 NCBI chrNW_004936534:2,024,341...2,131,241 JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in ISO PMID:9933407
(PMID:10678170), (PMID:18802469), (PMID:19283064), (PMID:21539824), (PMID:21743440), (PMID:22011390), (PMID:22711701), (PMID:22854038), (PMID:23133398), (PMID:23555294), (PMID:25533956), (PMID:25675407)
UniProt
MGI
PMID:9933407 PMID:10678170 PMID:18802469 PMID:19283064 PMID:21539824 More... RGD:11035335 NCBI chrNW_004936492:12,316,868...12,326,778
Ensembl chrNW_004936492:12,316,869...12,330,251
JBrowse link
MIS12/MIND type complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dsn1 DSN1 component of MIS12 kinetochore complex part_of IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936561:4,322,709...4,337,405
Ensembl chrNW_004936561:4,322,675...4,337,506
JBrowse link
G LOC101978306 polyamine-modulated factor 1 part_of IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936580:5,454,574...5,479,600
Ensembl chrNW_004936580:5,454,580...5,479,884
JBrowse link
G Mis12 MIS12 kinetochore complex component part_of ISO (PMID:16585270), (PMID:20819937), (PMID:27881301) UniProt PMID:16585270 PMID:20819937 PMID:27881301 NCBI chrNW_004936677:2,323,540...2,328,689 JBrowse link
G Nsl1 NSL1 component of MIS12 kinetochore complex part_of IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936557:773,805...806,095
Ensembl chrNW_004936557:773,146...807,223
JBrowse link
Mis6-Sim4 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpo centromere protein O part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936493:7,333,387...7,351,368
Ensembl chrNW_004936493:7,334,617...7,352,421
JBrowse link
Ndc80 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ndc80 NDC80 kinetochore complex component part_of IEA TreeGrafter
UniProt
InterPro
Ensembl
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936672:1,872,205...1,910,956
Ensembl chrNW_004936672:1,872,193...1,909,675
JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex part_of IEA TreeGrafter
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936481:21,342,667...21,371,311
Ensembl chrNW_004936481:21,342,786...21,371,328
JBrowse link
G Spc24 SPC24 component of NDC80 kinetochore complex part_of IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936659:1,308,089...1,315,449
Ensembl chrNW_004936659:1,308,083...1,315,450
JBrowse link
G Spc25 SPC25 component of NDC80 kinetochore complex part_of IEA TreeGrafter
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936469:10,628,235...10,652,168
Ensembl chrNW_004936469:10,628,230...10,652,232
JBrowse link
outer kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bod1 biorientation of chromosomes in cell division 1 part_of ISO (PMID:17938248) UniProt PMID:17938248 NCBI chrNW_004936609:2,034,271...2,096,274 JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:3,631,760...3,696,024
Ensembl chrNW_004936471:3,633,536...3,695,684
JBrowse link
G Ccnb1 cyclin B1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:400,287...407,677
Ensembl chrNW_004936480:399,224...407,704
JBrowse link
G Cenpe centromere protein E part_of ISO (PMID:19283064) MGI PMID:19283064 NCBI chrNW_004936520:188,601...265,904
Ensembl chrNW_004936520:188,628...265,733
JBrowse link
G Cenpf centromere protein F part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:3,642,281...3,695,262
Ensembl chrNW_004936628:3,643,000...3,695,221
JBrowse link
G Crebbp CREB binding protein part_of ISO (PMID:14519686) MGI PMID:14519686 NCBI chrNW_004936694:552,447...663,237
Ensembl chrNW_004936694:553,753...663,617
JBrowse link
G Dsn1 DSN1 component of MIS12 kinetochore complex part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:4,322,709...4,337,405
Ensembl chrNW_004936561:4,322,675...4,337,506
JBrowse link
G Knl1 kinetochore scaffold 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:4,079,877...4,110,205
Ensembl chrNW_004936471:4,059,995...4,109,413
JBrowse link
G LOC101978306 polyamine-modulated factor 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,454,574...5,479,600
Ensembl chrNW_004936580:5,454,580...5,479,884
JBrowse link
G Mis12 MIS12 kinetochore complex component part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chrNW_004936677:2,323,540...2,328,689 JBrowse link
G Ndc80 NDC80 kinetochore complex component part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936672:1,872,205...1,910,956
Ensembl chrNW_004936672:1,872,193...1,909,675
JBrowse link
G Nsl1 NSL1 component of MIS12 kinetochore complex part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:773,805...806,095
Ensembl chrNW_004936557:773,146...807,223
JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:21,342,667...21,371,311
Ensembl chrNW_004936481:21,342,786...21,371,328
JBrowse link
G Plk1 polo like kinase 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:8,321,415...8,332,414
Ensembl chrNW_004936501:8,321,305...8,332,424
JBrowse link
G Ska1 spindle and kinetochore associated complex subunit 1 part_of IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936497:12,777,454...12,793,992
Ensembl chrNW_004936497:12,777,334...12,794,032
JBrowse link
G Ska2 spindle and kinetochore associated complex subunit 2 part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936490:4,119,050...4,157,491 JBrowse link
G Ska3 spindle and kinetochore associated complex subunit 3 part_of IEA TreeGrafter
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936720:586,730...610,397
Ensembl chrNW_004936720:586,850...605,406
JBrowse link
G Spc24 SPC24 component of NDC80 kinetochore complex part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:1,308,089...1,315,449
Ensembl chrNW_004936659:1,308,083...1,315,450
JBrowse link
G Spc25 SPC25 component of NDC80 kinetochore complex part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:10,628,235...10,652,168
Ensembl chrNW_004936469:10,628,230...10,652,232
JBrowse link
G Spdl1 spindle apparatus coiled-coil protein 1 part_of ISO (PMID:19468067) UniProt PMID:19468067 NCBI chrNW_004936688:840,345...841,808 JBrowse link
G Zwint ZW10 interacting kinetochore protein part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chrNW_004936693:1,539,987...1,551,685 JBrowse link
recombination nodule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msh4 mutS homolog 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936571:2,827,283...2,898,562
Ensembl chrNW_004936571:2,822,058...2,898,562
JBrowse link
RZZ complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kntc1 kinetochore associated 1 part_of IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936558:1,936,946...2,016,474
Ensembl chrNW_004936558:1,937,048...2,016,447
JBrowse link
G Zw10 zw10 kinetochore protein part_of IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936612:825,419...860,971
Ensembl chrNW_004936612:825,419...860,971
JBrowse link
G Zwilch zwilch kinetochore protein part_of IEA Ensembl
InterPro
UniProt
TreeGrafter
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:26,642,321...26,674,475
Ensembl chrNW_004936471:26,642,352...26,677,684
JBrowse link
SKA complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ska1 spindle and kinetochore associated complex subunit 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:12,777,454...12,793,992
Ensembl chrNW_004936497:12,777,334...12,794,032
JBrowse link
G Ska2 spindle and kinetochore associated complex subunit 2 part_of ISO (PMID:31804178) UniProt PMID:31804178 NCBI chrNW_004936490:4,119,050...4,157,491 JBrowse link
G Ska3 spindle and kinetochore associated complex subunit 3 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936720:586,730...610,397
Ensembl chrNW_004936720:586,850...605,406
JBrowse link
Smc5-Smc6 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eid3 EP300 interacting inhibitor of differentiation 3 part_of IEA Ensembl
TreeGrafter
UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936492:10,232,140...10,233,557
Ensembl chrNW_004936492:10,232,335...10,233,438
JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component part_of IEA TreeGrafter
Ensembl
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:10,957,283...10,979,930
Ensembl chrNW_004936501:10,957,418...10,986,535
JBrowse link
G Nsmce2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase part_of IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936470:22,447,278...22,667,302
Ensembl chrNW_004936470:22,445,433...22,667,559
JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:1,433,119...1,434,506
Ensembl chrNW_004936483:1,433,522...1,434,409
JBrowse link
G Nsmce4a NSE4 homolog A, SMC5-SMC6 complex component part_of IEA InterPro
TreeGrafter
Ensembl
UniProt
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936486:10,873,690...10,889,064
Ensembl chrNW_004936486:10,873,146...10,887,346
JBrowse link
G Smc5 structural maintenance of chromosomes 5 part_of IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936503:6,388,556...6,483,293
Ensembl chrNW_004936503:6,388,487...6,483,333
JBrowse link
G Smc6 structural maintenance of chromosomes 6 part_of IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936493:13,191,389...13,250,788
Ensembl chrNW_004936493:13,191,455...13,252,578
JBrowse link
synaptonemal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnb1ip1 cyclin B1 interacting protein 1 located_in ISO (PMID:24390283) UniProt PMID:24390283 NCBI chrNW_004936877:523,022...528,387 JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 (inactive) located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,638,189...2,646,589
Ensembl chrNW_004936543:2,638,016...2,646,589
JBrowse link
G Hormad1 HORMA domain containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:933,123...956,201
Ensembl chrNW_004936580:933,365...954,486
JBrowse link
G Hormad2 HORMA domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936904:477,398...546,574
Ensembl chrNW_004936904:477,398...546,574
JBrowse link
G Hspa2 heat shock protein family A (Hsp70) member 2 located_in ISO (PMID:8622925) MGI PMID:8622925 NCBI chrNW_004936495:8,243,369...8,246,082 JBrowse link
G Incenp inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:999,148...1,028,157
Ensembl chrNW_004936581:999,497...1,025,062
JBrowse link
G Lig3 DNA ligase 3 located_in ISO (PMID:9001252) MGI PMID:9001252 NCBI chrNW_004936538:206,179...228,487
Ensembl chrNW_004936538:206,839...226,441
JBrowse link
G LOC101955845 synaptonemal complex protein 3-like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936809:42,732...53,271 JBrowse link
G LOC101977976 E3 ubiquitin-protein ligase CCNB1IP1 located_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936751:1,851,811...1,853,370 JBrowse link
G Mlh1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Mlh3 mutL homolog 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:4,164,322...4,195,408
Ensembl chrNW_004936488:4,164,918...4,195,517
JBrowse link
G Msh4 mutS homolog 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936571:2,827,283...2,898,562
Ensembl chrNW_004936571:2,822,058...2,898,562
JBrowse link
G Msh5 mutS homolog 5 located_in ISO (PMID:16260499) MGI PMID:16260499 NCBI chrNW_004936727:1,776,038...1,794,152
Ensembl chrNW_004936727:1,777,570...1,793,711
JBrowse link
G P3h4 prolyl 3-hydroxylase family member 4 (inactive) ISO RGD PMID:1363622 RGD:633987 NCBI chrNW_004936490:16,705,716...16,712,324
Ensembl chrNW_004936490:16,705,690...16,712,324
JBrowse link
G Plk1 polo like kinase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:8,321,415...8,332,414
Ensembl chrNW_004936501:8,321,305...8,332,424
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:369,366...375,243
Ensembl chrNW_004936722:369,423...375,243
JBrowse link
G Rnf212 ring finger protein 212 located_in ISO (PMID:23396135), (PMID:24390283) UniProt PMID:23396135 PMID:24390283 NCBI chrNW_004936477:22,122,854...22,173,324 JBrowse link
G Rnf212b ring finger protein 212B located_in IEA TreeGrafter
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936722:1,086,237...1,116,352
Ensembl chrNW_004936722:1,088,424...1,116,352
JBrowse link
G Smc1a structural maintenance of chromosomes 1A ISO MMO:0000679 RGD PMID:10652260 RGD:1331378 NCBI chrNW_004936751:332,351...388,756
Ensembl chrNW_004936751:349,597...388,755
JBrowse link
G Smc1b structural maintenance of chromosomes 1B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:4,315,401...4,389,318
Ensembl chrNW_004936629:4,315,401...4,389,069
JBrowse link
G Smc3 structural maintenance of chromosomes 3 ISO MMO:0000679 RGD PMID:10652260 RGD:1331378 NCBI chrNW_004936486:1,409,757...1,436,206
Ensembl chrNW_004936486:1,408,045...1,435,875
JBrowse link
G Stag3 STAG3 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:430,804...458,112
Ensembl chrNW_004936543:432,552...458,112
JBrowse link
G Syce1 synaptonemal complex central element protein 1 located_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936486:19,723,354...19,731,175
Ensembl chrNW_004936486:19,723,627...19,727,770
JBrowse link
G Sycp1 synaptonemal complex protein 1 located_in ISO (PMID:12815066), (PMID:16968740), (PMID:17696610), (PMID:18070917), (PMID:18316482), (PMID:20551173), (PMID:22011390), (PMID:25675407), (PMID:26358182), (PMID:26490168), (PMID:27473657), (PMID:27760146), (PMID:27856912), (PMID:30718482)
(PMID:15937223)
RGD
MGI
UniProt
PMID:8660935 PMID:12815066 PMID:15937223 PMID:16968740 PMID:17696610 More... RGD:8554354 RGD:9686370 NCBI chrNW_004936627:239,232...365,062 JBrowse link
G Sycp2 synaptonemal complex protein 2 located_in ISO (PMID:18316482), (PMID:26362258) RGD
MGI
PMID:9592139 PMID:18316482 PMID:26362258 RGD:69387 NCBI chrNW_004936514:8,264,628...8,331,577 JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936492:12,316,868...12,326,778
Ensembl chrNW_004936492:12,316,869...12,330,251
JBrowse link
G Syn1 synapsin I located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:13,334,998...13,387,082
Ensembl chrNW_004936502:13,334,995...13,387,172
JBrowse link
G Tex11 testis expressed 11 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:681,962...969,749
Ensembl chrNW_004936762:681,130...969,455
JBrowse link
G Tex12 testis expressed 12 located_in ISO (PMID:16968740) MGI PMID:16968740 NCBI chrNW_004936612:2,297,754...2,303,130 JBrowse link
transverse filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stag3 STAG3 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:430,804...458,112
Ensembl chrNW_004936543:432,552...458,112
JBrowse link
G Sycp1 synaptonemal complex protein 1 located_in ISO (PMID:15870106), (PMID:18283110), (PMID:21539824), (PMID:22711701) RGD
MGI
PMID:1464329 PMID:15870106 PMID:18283110 PMID:21539824 PMID:22711701 RGD:729937 NCBI chrNW_004936627:239,232...365,062 JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in ISO (PMID:15870106) MGI PMID:15870106 NCBI chrNW_004936492:12,316,868...12,326,778
Ensembl chrNW_004936492:12,316,869...12,330,251
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18223
    cellular anatomical structure 18002
      organelle 13362
        membraneless organelle 4797
          intracellular membraneless organelle 4797
            chromosome 1248
              condensed chromosome 258
                Smc5-Smc6 complex 7
                condensed chromosome, centromeric region + 154
                condensed nuclear chromosome + 81
paths to the root