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ONTOLOGY REPORT - ANNOTATIONS


Term:condensed chromosome
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Accession:GO:0000793 term browser browse the term
Definition:A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure.
Comment:Note that this term can be used to annotate gene products that localize to a mitotic chromosome in an organism that undergoes an 'open mitosis' in which the nuclear envelope breaks down during mitosis.
Synonyms:related_synonym: cytoplasmic mitotic chromosome;   metaphase chromosome;   mitotic chromosome



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condensed chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACYP1 acylphosphatase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:98,220,318...98,265,187
Ensembl chr 7:98,220,555...98,247,125
JBrowse link
G AKAP8 A-kinase anchoring protein 8 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:62,222,060...62,241,631
Ensembl chr 2:62,222,249...62,241,611
JBrowse link
G AURKC aurora kinase C located_in ISO (PMID:15670791) UniProt PMID:15670791 NCBI chr 6:61,584,575...61,588,402 JBrowse link
G BANF1 BAF nuclear assembly factor 1 is_active_in ISO
IBA
RGD
GO_Central
PMID:10393804 GO_REF:0000033 RGD:10054037 NCBI chr 2:6,333,451...6,335,326
Ensembl chr 2:6,333,453...6,334,839
JBrowse link
G BANF2 BANF family member 2 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr17:26,138,520...26,175,665
Ensembl chr17:26,131,001...26,176,393
JBrowse link
G BAZ1B bromodomain adjacent to zinc finger domain 1B located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:10,761,461...10,843,918
Ensembl chr 3:10,761,499...10,843,840
JBrowse link
G BRCA1 BRCA1 DNA repair associated located_in IEA Ensembl GO_REF:0000107 NCBI chr12:19,788,087...19,854,515
Ensembl chr12:19,786,020...19,854,668
JBrowse link
G CDK2 cyclin dependent kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:21,365,723...21,372,170
Ensembl chr 5:21,365,764...21,372,168
JBrowse link
G CTCF CCCTC-binding factor located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:28,188,002...28,261,009
Ensembl chr 6:28,195,647...28,261,009
JBrowse link
G ESRRB estrogen related receptor beta located_in ISO (PMID:27723719) UniProt PMID:27723719 NCBI chr 7:99,511,135...99,699,478
Ensembl chr 7:99,514,168...99,699,011
JBrowse link
G FANCD2 FA complementation group D2 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr13:66,241,951...66,308,601
Ensembl chr13:66,241,967...66,310,433
JBrowse link
G GTF2B general transcription factor IIB located_in
is_active_in
IEA
ISO
(PMID:24244602) Ensembl
MGI
PMID:24244602 GO_REF:0000107 NCBI chr 4:127,522,802...127,559,605
Ensembl chr 4:127,522,870...127,561,135
JBrowse link
G HMBS hydroxymethylbilane synthase located_in ISO strong staining of metaphase and anaphase chromatids RGD PMID:12917623 RGD:2301689 NCBI chr 9:46,300,039...46,308,681
Ensembl chr 9:46,300,050...46,308,868
JBrowse link
G HMGB1 high mobility group box 1 located_in ISS UniProt GO_REF:0000024 NCBI chr11:7,195,556...7,321,071 JBrowse link
G HMGB2 high mobility group box 2 located_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr14:16,709,966...16,712,288
Ensembl chr14:16,710,047...16,717,101
JBrowse link
G L3MBTL1 L3MBTL histone methyl-lysine binding protein 1 located_in ISO (PMID:10445843) UniProt PMID:10445843 NCBI chr17:46,135,567...46,176,967
Ensembl chr17:46,136,013...46,173,944
JBrowse link
G LIG4 DNA ligase 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:75,537,027...75,547,711
Ensembl chr11:75,537,036...75,547,716
JBrowse link
G LOC100514009 histone-lysine N-methyltransferase SETMAR located_in ISO (PMID:18790802) UniProt PMID:18790802 NCBI chr13:60,914,412...60,933,064 JBrowse link
G MACROH2A1 macroH2A.1 histone located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:137,535,128...137,623,886
Ensembl chr 2:137,534,138...137,623,886
JBrowse link
G MKI67 marker of proliferation Ki-67 located_in
is_active_in
ISO (PMID:12355204)
(PMID:27362226), (PMID:28935370), (PMID:32879492), (PMID:35513709), (PMID:39153474)
MGI
UniProt
PMID:12355204 PMID:27362226 PMID:28935370 PMID:32879492 PMID:35513709 More... NCBI chr14:137,266,622...137,296,312 JBrowse link
G MLH1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:21,791,276...21,877,789
Ensembl chr13:21,791,203...21,877,757
JBrowse link
G MSH4 mutS homolog 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:137,410,820...137,524,459
Ensembl chr 6:137,410,691...137,534,233
JBrowse link
G NANOG Nanog homeobox NOT|located_in ISO (PMID:27723719) UniProt PMID:27723719 NCBI chr 5:62,931,642...62,939,086
Ensembl chr 5:62,932,382...62,939,082
JBrowse link
G NCAPD2 non-SMC condensin I complex subunit D2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:64,136,505...64,167,410
Ensembl chr 5:64,136,505...64,167,410
JBrowse link
G NCAPD3 non-SMC condensin II complex subunit D3 located_in ISO (PMID:21795393) MGI PMID:21795393 NCBI chr 9:60,712,416...60,785,907
Ensembl chr 9:60,712,421...60,785,901
JBrowse link
G NCAPG non-SMC condensin I complex subunit G located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 8:12,759,225...12,807,164
Ensembl chr 8:12,759,641...12,807,163
JBrowse link
G NCAPH2 non-SMC condensin II complex subunit H2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:222,784...233,491
Ensembl chr 5:221,471...233,475
JBrowse link
G PAM peptidylglycine alpha-amidating monooxygenase located_in ISO (PMID:10601332) MGI PMID:10601332 NCBI chr 2:108,255,923...108,536,192
Ensembl chr 2:108,255,930...108,536,880
JBrowse link
G PES1 pescadillo ribosomal biogenesis factor 1 located_in ISO (PMID:12237316) MGI PMID:12237316 NCBI chr14:47,478,378...47,495,983
Ensembl chr14:47,476,801...47,495,982
JBrowse link
G RAD51 RAD51 recombinase located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,592,414...130,640,326
Ensembl chr 1:130,586,665...130,640,136
JBrowse link
G REC8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,118,743...75,127,759
Ensembl chr 7:75,118,744...75,125,537
JBrowse link
G RIF1 replication timing regulatory factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:769,518...832,036
Ensembl chr15:774,191...832,010
JBrowse link
G RPA1 replication protein A1 located_in ISO (PMID:12091911) MGI PMID:12091911 NCBI chr12:48,009,652...48,048,744
Ensembl chr12:48,009,719...48,048,741
JBrowse link
G SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:84,184,572...84,224,943
Ensembl chr 8:84,184,576...84,224,871
JBrowse link
G SMC2 structural maintenance of chromosomes 2 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 1:245,409,559...245,459,032
Ensembl chr 1:245,410,147...245,475,929
JBrowse link
G SYCP3 synaptonemal complex protein 3 located_in ISO (PMID:10809667), (PMID:12091911), (PMID:12591952), (PMID:17784788), (PMID:19625504) MGI PMID:10809667 PMID:12091911 PMID:12591952 PMID:17784788 PMID:19625504 NCBI chr 5:82,492,744...82,501,068
Ensembl chr 5:82,493,034...82,501,656
JBrowse link
G TOP2A DNA topoisomerase II alpha located_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,001,300...22,028,452
Ensembl chr12:22,001,282...22,028,450
JBrowse link
G TOP3B DNA topoisomerase III beta located_in ISO (PMID:12591952) MGI PMID:12591952 NCBI chr14:50,020,412...50,037,854
Ensembl chr14:50,020,509...50,037,856
JBrowse link
G TUBA1A tubulin alpha 1a located_in
is_active_in
IEA
ISO
(PMID:24244602) Ensembl
MGI
PMID:24244602 GO_REF:0000107 NCBI chr 5:15,186,059...15,190,211
Ensembl chr 5:15,185,532...15,190,428
JBrowse link
G VCAN versican NOT|located_in ISO (PMID:12589063) UniProt PMID:12589063 NCBI chr 2:91,358,348...91,643,697
Ensembl chr 2:91,384,391...91,811,208
JBrowse link
central element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1H14orf39 chromosome 1 C14orf39 homolog located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 1:189,330,137...189,471,874
Ensembl chr 1:189,407,490...189,470,541
JBrowse link
G INCENP inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:9,411,942...9,445,825
Ensembl chr 2:9,411,942...9,445,821
JBrowse link
G SYCE1 synaptonemal complex central element protein 1 located_in ISO (PMID:15944401), (PMID:22164254) HGNC-UCL PMID:15944401 PMID:22164254 NCBI chr14:141,726,708...141,737,830
Ensembl chr14:141,726,208...141,735,919
JBrowse link
G SYCE2 synaptonemal complex central element protein 2 located_in
is_active_in
IEA
IBA
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 2:66,118,439...66,133,454
Ensembl chr 2:66,128,492...66,131,963
JBrowse link
G SYCE3 synaptonemal complex central element protein 3 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 5:168,908...201,037
Ensembl chr 5:181,056...200,832
JBrowse link
G SYCP1 synaptonemal complex protein 1 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 4:105,592,354...105,730,413
Ensembl chr 4:105,591,743...105,730,398
JBrowse link
G TEX11 testis expressed 11 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr  X:56,543,933...56,925,104
Ensembl chr  X:56,544,560...56,925,779
JBrowse link
G TEX12 testis expressed 12 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 9:39,864,093...39,869,572
Ensembl chr 9:39,864,148...39,869,979
JBrowse link
checkpoint clamp complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HUS1 HUS1 checkpoint clamp component part_of IEA
IBA
InterPro
GO_Central
Ensembl
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr18:48,522,914...48,539,267
Ensembl chr18:48,522,998...48,534,682
JBrowse link
G RAD1 RAD1 checkpoint DNA exonuclease part_of IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr16:20,491,851...20,512,198
Ensembl chr16:20,466,889...20,512,135
JBrowse link
G RAD9A RAD9 checkpoint clamp component A part_of IEA
IBA
UniProt
GO_Central
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 2:5,123,142...5,129,740
Ensembl chr 2:5,123,134...5,129,703
JBrowse link
G RAD9B RAD9 checkpoint clamp component B part_of IEA
IBA
UniProt
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr14:31,869,570...31,903,485
Ensembl chr14:31,869,684...31,903,823
JBrowse link
chiasma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACYP1 acylphosphatase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:98,220,318...98,265,187
Ensembl chr 7:98,220,555...98,247,125
JBrowse link
G MLH1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:21,791,276...21,877,789
Ensembl chr13:21,791,203...21,877,757
JBrowse link
condensed chromosome, centromeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATRX ATRX chromatin remodeler located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:61,584,028...61,872,341
Ensembl chr  X:61,584,848...61,872,287
JBrowse link
G AURKB aurora kinase B located_in IEA Ensembl GO_REF:0000107 NCBI chr12:53,410,833...53,426,165
Ensembl chr12:53,410,177...53,423,225
JBrowse link
G BUB1 BUB1 mitotic checkpoint serine/threonine kinase located_in ISO (PMID:18084284), (PMID:19965387) MGI PMID:18084284 PMID:19965387 NCBI chr 3:45,585,188...45,623,240
Ensembl chr 3:45,585,226...45,624,543
JBrowse link
G CBX3 chromobox 3 located_in ISO (PMID:11124534) UniProt PMID:11124534 NCBI chr18:46,193,138...46,205,114
Ensembl chr18:46,193,140...46,204,714
JBrowse link
G CEBPB CCAAT enhancer binding protein beta located_in IEA Ensembl GO_REF:0000107 NCBI chr17:51,722,633...51,723,673
Ensembl chr17:51,722,426...51,724,305
JBrowse link
G CENPA centromere protein A located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:112,263,912...112,272,638
Ensembl chr 3:112,263,915...112,272,621
JBrowse link
G CENPB centromere protein B located_in IEA Ensembl GO_REF:0000107 NCBI chr17:31,929,846...31,932,539
Ensembl chr17:31,929,892...31,931,712
JBrowse link
G CENPC centromere protein C located_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chr 8:65,237,825...65,315,788
Ensembl chr 8:65,238,090...65,315,713
JBrowse link
G CENPE centromere protein E located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:117,888,968...117,965,325
Ensembl chr 8:117,888,970...117,965,252
JBrowse link
G KMT5B lysine methyltransferase 5B located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:4,710,510...4,768,237
Ensembl chr 2:4,711,023...4,765,979
JBrowse link
G KMT5C lysine methyltransferase 5C located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:59,517,058...59,524,551
Ensembl chr 6:59,517,098...59,524,550
JBrowse link
G MEIKIN meiotic kinetochore factor located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:134,103,568...134,208,250
Ensembl chr 2:134,104,890...134,207,138
JBrowse link
G NCAPD2 non-SMC condensin I complex subunit D2 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 5:64,136,505...64,167,410
Ensembl chr 5:64,136,505...64,167,410
JBrowse link
G NCAPD3 non-SMC condensin II complex subunit D3 located_in
is_active_in
IEA
IBA
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000104 NCBI chr 9:60,712,416...60,785,907
Ensembl chr 9:60,712,421...60,785,901
JBrowse link
G NCAPG non-SMC condensin I complex subunit G located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:12,759,225...12,807,164
Ensembl chr 8:12,759,641...12,807,163
JBrowse link
G PLK1 polo like kinase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:22,537,814...22,550,901
Ensembl chr 3:22,537,831...22,552,380
JBrowse link
G REC8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,118,743...75,127,759
Ensembl chr 7:75,118,744...75,125,537
JBrowse link
G SGO1 shugoshin 1 located_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chr13:7,137,891...7,153,202
Ensembl chr13:7,137,896...7,153,170
JBrowse link
G SGO2 shugoshin 2 located_in ISO (PMID:18084284), (PMID:18765791), (PMID:19283064), (PMID:25533956) MGI PMID:18084284 PMID:18765791 PMID:19283064 PMID:25533956 NCBI chr15:104,099,378...104,150,723
Ensembl chr15:104,099,384...104,150,720
JBrowse link
G SS18L1 SS18L1 subunit of BAF chromatin remodeling complex located_in IEA Ensembl GO_REF:0000107 NCBI chr17:61,571,619...61,598,104
Ensembl chr17:61,571,614...61,598,099
JBrowse link
G SYCP2 synaptonemal complex protein 2 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr17:59,875,992...59,962,314
Ensembl chr17:59,875,993...59,955,209
JBrowse link
G SYCP2L synaptonemal complex protein 2 like located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 7:7,574,153...7,647,874
Ensembl chr 7:7,574,372...7,640,989
JBrowse link
G SYCP3 synaptonemal complex protein 3 located_in ISO (PMID:22854038) MGI PMID:22854038 NCBI chr 5:82,492,744...82,501,068
Ensembl chr 5:82,493,034...82,501,656
JBrowse link
condensed nuclear chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACYP1 acylphosphatase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:98,220,318...98,265,187
Ensembl chr 7:98,220,555...98,247,125
JBrowse link
G ADD3 adducin 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:120,451,421...120,583,725
Ensembl chr14:120,451,575...120,583,722
JBrowse link
G BRCA1 BRCA1 DNA repair associated located_in IEA Ensembl GO_REF:0000107 NCBI chr12:19,788,087...19,854,515
Ensembl chr12:19,786,020...19,854,668
JBrowse link
G BRD4 bromodomain containing 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:62,250,958...62,345,851
Ensembl chr 2:62,250,989...62,345,362
JBrowse link
G CCNB1IP1 cyclin B1 interacting protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:78,553,680...78,576,057
Ensembl chr 7:78,564,122...78,575,462
JBrowse link
G CDX2 caudal type homeobox 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:5,339,727...5,346,081
Ensembl chr11:5,339,716...5,346,057
JBrowse link
G CHEK1 checkpoint kinase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:52,759,224...52,790,878
Ensembl chr 9:52,753,528...52,790,700
JBrowse link
G CHMP1A charged multivesicular body protein 1A located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:351,878...358,655
Ensembl chr 6:351,866...358,653
JBrowse link
G DMC1 DNA meiotic recombinase 1 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 5:9,431,236...9,470,333
Ensembl chr 5:9,431,177...9,470,113
JBrowse link
G DNMT3L DNA methyltransferase 3 like located_in IEA Ensembl GO_REF:0000107 NCBI chr13:207,119,025...207,141,990
Ensembl chr13:207,119,051...207,132,538
JBrowse link
G H1-6 H1.6 linker histone, cluster member located_in ISO (PMID:18316482) MGI PMID:18316482 NCBI chr 7:20,774,135...20,777,244
Ensembl chr 7:20,775,859...20,776,497
JBrowse link
G H2AX H2A.X variant histone located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,308,824...46,310,494
Ensembl chr 9:46,309,653...46,310,084
JBrowse link
G HORMAD1 HORMA domain containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:98,447,298...98,469,650
Ensembl chr 4:98,449,891...98,469,650
JBrowse link
G IHO1 interactor of HORMAD1 1 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr13:31,802,963...31,836,911
Ensembl chr13:31,802,948...31,837,912
JBrowse link
G KIFAP3 kinesin associated protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:80,922,032...81,105,135
Ensembl chr 4:80,921,682...81,108,360
JBrowse link
G LIG3 DNA ligase 3 located_in ISO (PMID:9001252) MGI PMID:9001252 NCBI chr12:40,153,105...40,205,077
Ensembl chr12:40,153,397...40,183,622
JBrowse link
G LRPPRC leucine rich pentatricopeptide repeat containing located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:96,474,510...96,590,706
Ensembl chr 3:96,474,549...96,595,143
JBrowse link
G MLH1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:21,791,276...21,877,789
Ensembl chr13:21,791,203...21,877,757
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease ISO sex vesicles/chromatin of XY bivalent RGD PMID:10855503 RGD:2300257 NCBI chr 9:26,572,352...26,634,596
Ensembl chr 9:26,572,361...26,634,567
JBrowse link
G MSH4 mutS homolog 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:137,410,820...137,524,459
Ensembl chr 6:137,410,691...137,534,233
JBrowse link
G NCAPD2 non-SMC condensin I complex subunit D2 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chr 5:64,136,505...64,167,410
Ensembl chr 5:64,136,505...64,167,410
JBrowse link
G NCAPD3 non-SMC condensin II complex subunit D3 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chr 9:60,712,416...60,785,907
Ensembl chr 9:60,712,421...60,785,901
JBrowse link
G NCAPG non-SMC condensin I complex subunit G located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:12,759,225...12,807,164
Ensembl chr 8:12,759,641...12,807,163
JBrowse link
G NCAPG2 non-SMC condensin II complex subunit G2 located_in IEA Ensembl GO_REF:0000107 NCBI chr18:653,182...713,825
Ensembl chr18:653,224...717,200
JBrowse link
G NCAPH non-SMC condensin I complex subunit H located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:46,852,388...46,893,008
Ensembl chr 3:46,852,392...46,893,013
JBrowse link
G NCAPH2 non-SMC condensin II complex subunit H2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:222,784...233,491
Ensembl chr 5:221,471...233,475
JBrowse link
G NEK2 NIMA related kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:131,547,044...131,560,527
Ensembl chr 9:131,547,069...131,561,095
JBrowse link
G NIFK nucleolar protein interacting with the FHA domain of MKI67 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:29,719,024...29,734,811
Ensembl chr15:29,714,297...29,754,978
JBrowse link
G NOL6 nucleolar protein 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:33,022,035...33,035,201
Ensembl chr10:33,022,035...33,035,200
JBrowse link
G PSMC3IP PSMC3 interacting protein is_active_in IBA GO_Central GO_REF:0000033 NCBI chr12:20,244,243...20,250,151
Ensembl chr12:20,244,304...20,250,159
JBrowse link
G RAD21 RAD21 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:21,772,821...21,802,453
Ensembl chr 4:21,772,855...21,802,715
JBrowse link
G RAD21L1 RAD21 cohesin complex component like 1 located_in ISO (PMID:24797475) MGI PMID:24797475 NCBI chr17:34,035,526...34,064,215 JBrowse link
G RAD50 RAD50 double strand break repair protein is_active_in ISO
IBA
sex vesicles/chromatin of XY bivalent RGD
GO_Central
PMID:10855503 GO_REF:0000033 RGD:2300257 NCBI chr 2:134,844,460...134,939,188
Ensembl chr 2:134,700,817...134,939,189
JBrowse link
G RAD51 RAD51 recombinase located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 1:130,592,414...130,640,326
Ensembl chr 1:130,586,665...130,640,136
JBrowse link
G RCC1 regulator of chromosome condensation 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:85,540,766...85,565,869
Ensembl chr 6:85,546,024...85,565,866
JBrowse link
G REC8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,118,743...75,127,759
Ensembl chr 7:75,118,744...75,125,537
JBrowse link
G RPA1 replication protein A1 located_in ISO (PMID:18283110), (PMID:18316482), (PMID:20551173), (PMID:22164254) MGI PMID:18283110 PMID:18316482 PMID:20551173 PMID:22164254 NCBI chr12:48,009,652...48,048,744
Ensembl chr12:48,009,719...48,048,741
JBrowse link
G RRS1 ribosome biogenesis regulator 1 homolog located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:68,285,803...68,288,213
Ensembl chr 4:68,285,803...68,288,195
JBrowse link
G RSPH1 radial spoke head component 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:205,808,923...205,827,098
Ensembl chr13:205,808,671...205,827,213
JBrowse link
G SHOC1 shortage in chiasmata 1 located_in
is_active_in
IEA
IBA
InterPro
GO_Central
Ensembl
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:252,465,893...252,555,063
Ensembl chr 1:252,466,222...252,562,066
JBrowse link
G SMC1B structural maintenance of chromosomes 1B located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:3,976,098...4,067,148
Ensembl chr 5:3,976,140...4,067,395
JBrowse link
G SMC2 structural maintenance of chromosomes 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:245,409,559...245,459,032
Ensembl chr 1:245,410,147...245,475,929
JBrowse link
G SMC4 structural maintenance of chromosomes 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:100,078,149...100,120,907
Ensembl chr13:100,078,272...100,117,309
JBrowse link
G STAG3 STAG3 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:8,175,908...8,211,898
Ensembl chr 3:8,175,915...8,211,889
JBrowse link
G SUN2 Sad1 and UNC84 domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:9,273,136...9,293,258
Ensembl chr 5:9,273,240...9,293,254
JBrowse link
G SYCP1 synaptonemal complex protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:105,592,354...105,730,413
Ensembl chr 4:105,591,743...105,730,398
JBrowse link
G SYCP3 synaptonemal complex protein 3 located_in ISO (PMID:18316482), (PMID:21621532), (PMID:22863743), (PMID:24589552), (PMID:24891606) MGI PMID:18316482 PMID:21621532 PMID:22863743 PMID:24589552 PMID:24891606 NCBI chr 5:82,492,744...82,501,068
Ensembl chr 5:82,493,034...82,501,656
JBrowse link
G TEX11 testis expressed 11 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:56,543,933...56,925,104
Ensembl chr  X:56,544,560...56,925,779
JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:74,768,251...74,846,377
Ensembl chr13:74,768,257...74,846,340
JBrowse link
G TTN titin located_in ISO (PMID:9548712) BHF-UCL PMID:9548712 NCBI chr15:84,226,953...84,501,320 JBrowse link
G TUBG1 tubulin gamma 1 located_in IEA Ensembl GO_REF:0000107 Ensembl chr12:20,211,002...20,221,103 JBrowse link
inner kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APITD1 apoptosis-inducing, TAF9-like domain 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 6:70,700,802...70,711,719
Ensembl chr 6:70,701,694...70,711,717
JBrowse link
G CENPC centromere protein C part_of IEA Ensembl GO_REF:0000107 NCBI chr 8:65,237,825...65,315,788
Ensembl chr 8:65,238,090...65,315,713
JBrowse link
G CENPH centromere protein H part_of IEA Ensembl GO_REF:0000107 NCBI chr16:47,353,319...47,378,746
Ensembl chr16:47,353,324...47,378,745
JBrowse link
G CENPI centromere protein I part_of IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr  X:82,776,375...82,826,651
Ensembl chr  X:82,776,447...82,825,655
JBrowse link
G CENPK centromere protein K part_of IEA Ensembl GO_REF:0000107 NCBI chr16:44,008,673...44,080,565
Ensembl chr16:44,041,490...44,080,492
JBrowse link
G CENPL centromere protein L part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:116,090,868...116,109,822
Ensembl chr 9:116,090,870...116,109,483
JBrowse link
G CENPM centromere protein M part_of IEA Ensembl GO_REF:0000107 NCBI chr 5:6,677,607...6,690,322
Ensembl chr 5:6,677,717...6,690,308
JBrowse link
G CENPN centromere protein N part_of IEA Ensembl GO_REF:0000107 NCBI chr 6:7,227,981...7,254,927
Ensembl chr 6:7,227,990...7,254,891
JBrowse link
G CENPO centromere protein O part_of IEA Ensembl GO_REF:0000107 NCBI chr 3:113,968,735...113,979,201
Ensembl chr 3:113,968,902...113,979,148
JBrowse link
G CENPP centromere protein P part_of IEA Ensembl GO_REF:0000107 NCBI chr 3:42,053,074...42,309,745
Ensembl chr 3:42,053,058...42,308,429
JBrowse link
G CENPQ centromere protein Q part_of IEA Ensembl GO_REF:0000107 NCBI chr 7:43,624,734...43,639,907
Ensembl chr 7:43,624,832...43,641,028
JBrowse link
G CENPT centromere protein T part_of IEA Ensembl GO_REF:0000107 NCBI chr 6:28,450,568...28,456,620
Ensembl chr 6:28,450,569...28,456,229
JBrowse link
G CENPU centromere protein U part_of IEA Ensembl GO_REF:0000107 NCBI chr15:45,818,562...45,851,461
Ensembl chr15:45,818,951...45,851,441
JBrowse link
G CENPW centromere protein W part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:36,405,693...36,695,989
Ensembl chr 1:36,685,265...36,695,955
JBrowse link
G CENPX centromere protein X part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chr12:991,618...994,849 JBrowse link
G H3-3A H3.3 histone A part_of ISO (PMID:25645018) MGI PMID:25645018 NCBI chr10:13,939,938...13,947,976
Ensembl chr10:13,923,077...13,948,484
JBrowse link
G ORC2 origin recognition complex subunit 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr15:104,612,727...104,656,558
Ensembl chr15:104,613,610...104,656,492
JBrowse link
kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCTF1 AT-hook containing transcription factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:15,042,168...15,121,885
Ensembl chr10:15,042,275...15,132,326
JBrowse link
G ANAPC16 anaphase promoting complex subunit 16 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
UniProt
GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr14:75,082,673...75,093,078
Ensembl chr14:75,082,740...75,093,074
JBrowse link
G APC APC regulator of WNT signaling pathway located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:116,913,354...116,985,303
Ensembl chr 2:116,812,582...117,034,887
JBrowse link
G AURKA aurora kinase A is_active_in IBA GO_Central GO_REF:0000033 NCBI chr17:56,954,838...56,972,435 JBrowse link
G AURKB aurora kinase B part_of
is_active_in
located_in
ISO
IBA
ISS
IEA
(PMID:22024163) CACAO
GO_Central
UniProt
Ensembl
PMID:22024163 GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr12:53,410,833...53,426,165
Ensembl chr12:53,410,177...53,423,225
JBrowse link
G AURKC aurora kinase C is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 6:61,584,575...61,588,402 JBrowse link
G AURKC aurora kinase C is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 6:61,652,298...61,656,126
Ensembl chr 6:61,650,649...61,656,113
JBrowse link
G BATF3 basic leucine zipper ATF-like transcription factor 3 located_in IEA InterPro GO_REF:0000002 NCBI chr 9:130,699,092...130,711,719
Ensembl chr 9:130,699,196...130,712,358
JBrowse link
G BGLAP bone gamma-carboxyglutamate protein located_in ISO (PMID:15371340) WB PMID:15371340 NCBI chr 4:93,807,703...93,808,806
Ensembl chr 4:93,807,706...93,808,968
JBrowse link
G BIRC5 baculoviral IAP repeat containing 5 located_in
is_active_in
IEA
IBA
ISS
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 NCBI chr12:3,747,276...3,755,214
Ensembl chr12:3,747,279...3,755,215
JBrowse link
G BUB1 BUB1 mitotic checkpoint serine/threonine kinase located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
UniProt
GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:45,585,188...45,623,240
Ensembl chr 3:45,585,226...45,624,543
JBrowse link
G BUB1B BUB1 mitotic checkpoint serine/threonine kinase B located_in
is_active_in
IEA
IBA
UniProt
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:131,093,026...131,143,840
Ensembl chr 1:131,092,958...131,143,794
JBrowse link
G BUB3 BUB3 mitotic checkpoint protein located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr14:132,703,088...132,715,353
Ensembl chr14:132,703,725...132,715,348
JBrowse link
G CBX5 chromobox 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:19,446,083...19,484,527
Ensembl chr 5:19,446,086...19,484,463
JBrowse link
G CDC20 cell division cycle 20 located_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr 6:167,886,266...167,890,587
Ensembl chr 6:167,886,270...167,890,583
JBrowse link
G CDT1 chromatin licensing and DNA replication factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:893,377...897,706
Ensembl chr 6:893,381...897,934
JBrowse link
G CENPC centromere protein C located_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 8:65,237,825...65,315,788
Ensembl chr 8:65,238,090...65,315,713
JBrowse link
G CENPE centromere protein E located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:117,888,968...117,965,325
Ensembl chr 8:117,888,970...117,965,252
JBrowse link
G CENPF centromere protein F located_in
NOT|located_in
IEA
ISO
(PMID:10373470) Ensembl
MGI
PMID:10373470 GO_REF:0000107 NCBI chr 9:128,948,386...129,012,241
Ensembl chr 9:128,948,498...129,012,218
JBrowse link
G CENPH centromere protein H located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
InterPro
UniProt
GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr16:47,353,319...47,378,746
Ensembl chr16:47,353,324...47,378,745
JBrowse link
G CENPI centromere protein I located_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr  X:82,776,375...82,826,651
Ensembl chr  X:82,776,447...82,825,655
JBrowse link
G CENPO centromere protein O located_in IEA InterPro GO_REF:0000002 NCBI chr 3:113,968,735...113,979,201
Ensembl chr 3:113,968,902...113,979,148
JBrowse link
G CENPT centromere protein T located_in IEA Ensembl
InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 6:28,450,568...28,456,620
Ensembl chr 6:28,450,569...28,456,229
JBrowse link
G CENPV centromere protein V is_active_in
located_in
IBA
ISO
(PMID:18772885) GO_Central
UniProt
PMID:18772885 GO_REF:0000033 NCBI chr12:59,200,041...59,215,941
Ensembl chr12:59,200,020...59,210,033
JBrowse link
G CENPW centromere protein W located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
UniProt
GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:36,405,693...36,695,989
Ensembl chr 1:36,685,265...36,695,955
JBrowse link
G CEP192 centrosomal protein 192 located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr 6:96,611,560...96,733,800
Ensembl chr 6:96,710,701...96,733,795
Ensembl chr 6:96,710,701...96,733,795
JBrowse link
G CFDP1 craniofacial development protein 1 located_in IEA UniProt GO_REF:0000043 NCBI chr 6:12,223,701...12,354,180
Ensembl chr 6:12,223,748...12,354,177
JBrowse link
G CHMP1A charged multivesicular body protein 1A located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:351,878...358,655
Ensembl chr 6:351,866...358,653
JBrowse link
G CHMP1B charged multivesicular body protein 1B located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chr 6:97,356,924...97,359,613 JBrowse link
G CHMP2A charged multivesicular body protein 2A located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:63,102,155...63,105,032
Ensembl chr 6:63,102,156...63,104,943
JBrowse link
G CHMP2B charged multivesicular body protein 2B located_in IEA Ensembl GO_REF:0000107 NCBI chr13:168,534,950...168,569,574
Ensembl chr13:168,533,694...168,569,688
JBrowse link
G CHMP3 charged multivesicular body protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:58,206,921...58,279,252
Ensembl chr 3:58,206,921...58,279,248
JBrowse link
G CHMP4A charged multivesicular body protein 4A located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,089,092...75,093,796
Ensembl chr 7:75,089,423...75,097,761
JBrowse link
G CHMP4B charged multivesicular body protein 4B located_in IEA Ensembl GO_REF:0000107 NCBI chr17:37,285,422...37,334,103
Ensembl chr17:37,285,442...37,334,101
JBrowse link
G CHMP4C charged multivesicular body protein 4C located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:54,860,481...54,895,229
Ensembl chr 4:54,859,930...54,895,192
JBrowse link
G CHMP5 charged multivesicular body protein 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:33,212,769...33,227,237
Ensembl chr10:33,211,516...33,227,302
JBrowse link
G CHMP6 charged multivesicular body protein 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,691,821...1,698,347
Ensembl chr12:1,691,823...1,698,305
JBrowse link
G CHMP7 charged multivesicular body protein 7 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,390,066...7,403,657
Ensembl chr14:7,390,061...7,403,654
JBrowse link
G CKAP5 cytoskeleton associated protein 5 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 2:15,680,723...15,790,580
Ensembl chr 2:15,680,787...15,790,569
JBrowse link
G CLASP1 cytoplasmic linker associated protein 1 is_active_in
located_in
ISO
IBA
IEA
MMO:0000538 RGD
GO_Central
UniProt
PMID:28351621 GO_REF:0000033 GO_REF:0000043 RGD:27096077 NCBI chr15:29,782,613...30,042,727
Ensembl chr15:29,782,746...30,042,734
JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 is_active_in
located_in
IBA
ISO
(PMID:16866869) GO_Central
UniProt
PMID:16866869 GO_REF:0000033 NCBI chr13:19,305,430...19,510,589
Ensembl chr13:19,305,181...19,510,585
JBrowse link
G CSNK1A1 casein kinase 1 alpha 1 located_in IEA UniProt GO_REF:0000043 NCBI chr 2:150,612,845...150,662,431
Ensembl chr 2:150,612,077...150,662,284
JBrowse link
G DCTN1 dynactin subunit 1 is_active_in
located_in
IBA
IEA
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000107 NCBI chr 3:68,642,562...68,673,605
Ensembl chr 3:68,643,247...68,673,604
JBrowse link
G DCTN2 dynactin subunit 2 located_in ISO
IEA
RGD
Ensembl
PMID:8647893 GO_REF:0000107 RGD:1331348 NCBI chr 5:22,799,286...22,814,358
Ensembl chr 5:22,799,287...22,814,362
JBrowse link
G DCTN3 dynactin subunit 3 located_in IEA UniProt GO_REF:0000043 NCBI chr10:32,180,557...32,187,239
Ensembl chr10:32,180,613...32,188,059
JBrowse link
G DCTN4 dynactin subunit 4 ISO RGD PMID:10607597 RGD:70710 NCBI chr 2:151,681,001...151,713,923
Ensembl chr 2:151,681,003...151,783,746
JBrowse link
G DCTN5 dynactin subunit 5 located_in IEA UniProt GO_REF:0000043 NCBI chr 3:22,564,173...22,586,806
Ensembl chr 3:22,558,951...22,586,802
JBrowse link
G DCTN6 dynactin subunit 6 located_in IEA UniProt GO_REF:0000043 NCBI chr15:54,876,213...54,895,883
Ensembl chr15:54,875,850...54,896,148
JBrowse link
G DSN1 DSN1 component of MIS12 kinetochore complex located_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,992,769...40,017,388
Ensembl chr17:39,990,624...40,017,365
JBrowse link
G DYNC1I1 dynein cytoplasmic 1 intermediate chain 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:75,414,663...75,760,527
Ensembl chr 9:75,414,755...75,760,519
JBrowse link
G DYNC1LI1 dynein cytoplasmic 1 light intermediate chain 1 located_in ISO
IEA
RGD
Ensembl
PMID:21169557 GO_REF:0000107 RGD:13207422 NCBI chr13:18,507,710...18,558,057
Ensembl chr13:18,506,194...18,558,007
JBrowse link
G DYNC1LI2 dynein cytoplasmic 1 light intermediate chain 2 ISO RGD PMID:21169557 RGD:13207422 NCBI chr 6:27,416,475...27,446,172
Ensembl chr 6:27,416,477...27,446,360
JBrowse link
G DYNLL1 dynein light chain LC8-type 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:40,455,954...40,458,352
Ensembl chr14:40,455,985...40,459,104
JBrowse link
G DYNLT3 dynein light chain Tctex-type 3 located_in ISO
IEA
RGD
UniProt
Ensembl
PMID:17289665 GO_REF:0000043 GO_REF:0000107 RGD:8554144 NCBI chr  X:33,711,993...33,724,596
Ensembl chr  X:33,711,492...33,724,683
JBrowse link
G FBXO28 F-box protein 28 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:19,936,217...19,968,960
Ensembl chr10:19,936,244...19,968,956
JBrowse link
G FIRRM FIGNL1 interacting regulator of recombination and mitosis located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:81,174,911...81,216,094
Ensembl chr 4:81,175,541...81,216,096
JBrowse link
G GPATCH11 G-patch domain containing 11 is_active_in
located_in
IBA
ISO
(PMID:20813266) GO_Central
UniProt
PMID:20813266 GO_REF:0000033 NCBI chr 3:103,100,083...103,111,998
Ensembl chr 3:103,098,588...103,119,512
JBrowse link
G GTF2B general transcription factor IIB located_in
is_active_in
IEA
ISO
(PMID:24244602) Ensembl
MGI
PMID:24244602 GO_REF:0000107 NCBI chr 4:127,522,802...127,559,605
Ensembl chr 4:127,522,870...127,561,135
JBrowse link
G HJURP Holliday junction recognition protein located_in IEA Ensembl GO_REF:0000107 NCBI chr15:134,106,561...134,123,163
Ensembl chr15:134,106,578...134,123,140
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U located_in IEA Ensembl GO_REF:0000107 NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,477,902...17,497,030
JBrowse link
G HSF1 heat shock transcription factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:463,531...486,483
Ensembl chr 4:463,393...486,473
JBrowse link
G INCENP inner centromere protein located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
UniProt
GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr 2:9,411,942...9,445,825
Ensembl chr 2:9,411,942...9,445,821
JBrowse link
G IVD isovaleryl-CoA dehydrogenase located_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 1:130,916,956...130,930,172
Ensembl chr 1:130,916,146...130,930,078
JBrowse link
G KAT2B lysine acetyltransferase 2B located_in IEA Ensembl GO_REF:0000107 NCBI chr13:6,985,151...7,099,771
Ensembl chr13:6,985,235...7,100,345
JBrowse link
G KAT5 lysine acetyltransferase 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:6,560,544...6,572,461
Ensembl chr 2:6,560,513...6,572,466
JBrowse link
G KAT8 lysine acetyltransferase 8 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:17,362,326...17,373,110
Ensembl chr 3:17,362,267...17,373,110
JBrowse link
G KIF18A kinesin family member 18A located_in ISO (PMID:20981276) MGI PMID:20981276 NCBI chr 2:32,244,073...32,331,392
Ensembl chr 2:32,244,137...32,335,736
JBrowse link
G KIF2C kinesin family member 2C located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chr 6:166,556,765...166,577,904
Ensembl chr 6:166,556,776...166,577,904
JBrowse link
G KNL1 kinetochore scaffold 1 located_in ISO (PMID:15371340), (PMID:19893618)
(PMID:35167144)
UniProt PMID:15371340 PMID:19893618 PMID:35167144 NCBI chr 1:130,652,493...130,728,989 JBrowse link
G LRWD1 leucine rich repeats and WD repeat domain containing 1 located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr 3:9,806,251...9,812,488
Ensembl chr 3:9,806,246...9,812,478
JBrowse link
G MAD1L1 mitotic arrest deficient 1 like 1 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 3:1,236,066...1,559,346
Ensembl chr 3:1,236,076...1,559,041
JBrowse link
G MAD2L1 mitotic arrest deficient 2 like 1 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 8:103,927,358...103,936,669
Ensembl chr 8:103,927,353...103,936,664
JBrowse link
G MEAF6 MYST/Esa1 associated factor 6 located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr 6:93,559,259...93,589,030
Ensembl chr 6:93,559,101...93,589,001
JBrowse link
G MEIKIN meiotic kinetochore factor located_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 2:134,103,568...134,208,250
Ensembl chr 2:134,104,890...134,207,138
JBrowse link
G MIS12 MIS12 kinetochore complex component located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chr12:51,505,376...51,508,337
Ensembl chr12:51,505,381...51,507,943
JBrowse link
G MTBP MDM2 binding protein located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 4:18,533,201...18,608,702
Ensembl chr 4:18,532,041...18,608,602
JBrowse link
G MTCL1 microtubule crosslinking factor 1 located_in ISO (PMID:33587225) UniProt PMID:33587225 NCBI chr 6:99,062,347...99,178,570
Ensembl chr 6:99,062,354...99,178,468
JBrowse link
G NCAPD3 non-SMC condensin II complex subunit D3 located_in ISO (PMID:21795393) MGI PMID:21795393 NCBI chr 9:60,712,416...60,785,907
Ensembl chr 9:60,712,421...60,785,901
JBrowse link
G NDC80 NDC80 kinetochore complex component located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr 6:104,000,794...104,055,785
Ensembl chr 6:103,999,034...104,055,760
JBrowse link
G NDE1 nudE neurodevelopment protein 1 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
UniProt
GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr 3:7,145,094...7,174,691
Ensembl chr 3:7,125,936...7,180,623
JBrowse link
G NDEL1 nudE neurodevelopment protein 1 like 1 located_in
is_active_in
IEA
IBA
UniProt
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr12:53,553,897...53,640,470
Ensembl chr12:53,557,175...53,640,457
JBrowse link
G NEK2 NIMA related kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:131,547,044...131,560,527
Ensembl chr 9:131,547,069...131,561,095
JBrowse link
G NSL1 NSL1 component of MIS12 kinetochore complex located_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 9:130,599,901...130,668,935
Ensembl chr 9:130,622,331...130,668,936
JBrowse link
G NUF2 NUF2 component of NDC80 kinetochore complex located_in IEA Ensembl
UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 4:87,162,873...87,194,193
Ensembl chr 4:87,162,818...87,194,170
JBrowse link
G NUP107 nucleoporin 107 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,989,661...33,040,565
Ensembl chr 5:32,989,794...33,042,575
JBrowse link
G NUP133 nucleoporin 133 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:60,353,420...60,404,952
Ensembl chr14:60,353,474...60,408,828
JBrowse link
G NUP160 nucleoporin 160 located_in ISO (PMID:15146057) UniProt PMID:15146057 NCBI chr 2:14,840,056...14,891,567
Ensembl chr 2:14,840,410...14,891,677
JBrowse link
G NUP37 nucleoporin 37 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:82,091,439...82,144,463
Ensembl chr 5:82,091,517...82,145,528
JBrowse link
G NUP43 nucleoporin 43 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:16,249,493...16,267,636
Ensembl chr 1:16,249,546...16,267,624
JBrowse link
G NUP85 nucleoporin 85 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,072,731...6,103,972
Ensembl chr12:6,071,812...6,103,979
JBrowse link
G NUP98 nucleoporin 98 and 96 precursor located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:6,319,616...6,419,652
Ensembl chr 9:6,319,650...6,419,660
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr12:48,567,329...48,735,836
Ensembl chr12:48,628,816...48,735,834
JBrowse link
G PBRM1 polybromo 1 located_in ISO (PMID:14519686) MGI PMID:14519686 NCBI chr13:34,689,718...34,821,117
Ensembl chr13:34,689,726...34,820,952
JBrowse link
G PHF2 PHD finger protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:42,988,607...43,078,811
Ensembl chr 3:42,988,636...43,078,808
JBrowse link
G PINX1 PIN2 (TERF1) interacting telomerase inhibitor 1 located_in ISO (PMID:19393617) UniProt PMID:19393617 NCBI chr14:13,965,733...14,041,841
Ensembl chr14:13,967,070...14,041,788
JBrowse link
G PLK1 polo like kinase 1 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 3:22,537,814...22,550,901
Ensembl chr 3:22,537,831...22,552,380
JBrowse link
G PLK2 polo like kinase 2 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr16:37,299,116...37,305,114
Ensembl chr16:37,299,119...37,305,114
JBrowse link
G PLK3 polo like kinase 3 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 6:166,528,760...166,533,734
Ensembl chr 6:166,528,765...166,533,731
JBrowse link
G PLK5 polo like kinase 5 (inactive) is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 2:76,948,062...76,956,310 JBrowse link
G PMF1 polyamine modulated factor 1 located_in IEA UniProt GO_REF:0000043 NCBI chr 4:93,810,863...93,836,786
Ensembl chr 4:93,810,507...93,837,652
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma located_in IEA UniProt GO_REF:0000043 NCBI chr14:32,071,472...32,091,267
Ensembl chr14:32,070,545...32,091,499
JBrowse link
G PPP1R12A protein phosphatase 1 regulatory subunit 12A located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:101,490,282...101,639,456
Ensembl chr 5:101,490,341...101,639,429
JBrowse link
G PRODH2 proline dehydrogenase 2 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 6:45,213,712...45,240,437 JBrowse link
G PRP4K pre-mRNA processing factor kinase PRP4K located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,382,498...2,417,085
Ensembl chr 7:2,382,495...2,412,908
JBrowse link
G PSEN1 presenilin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:96,478,179...96,567,884
Ensembl chr 7:96,478,190...96,569,130
JBrowse link
G PSEN2 presenilin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:14,532,556...14,561,862
Ensembl chr10:14,532,767...14,577,251
JBrowse link
G RANGAP1 Ran GTPase activating protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:7,210,974...7,240,965
Ensembl chr 5:7,211,010...7,241,003
JBrowse link
G RASSF2 Ras association domain family member 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:13,773,289...13,822,729
Ensembl chr17:13,773,292...13,822,206
JBrowse link
G REC8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,118,743...75,127,759
Ensembl chr 7:75,118,744...75,125,537
JBrowse link
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component located_in IEA Ensembl GO_REF:0000107 NCBI chr13:66,483,620...66,524,411
Ensembl chr13:66,480,169...66,524,384
JBrowse link
G SEPTIN7 septin 7 located_in IEA UniProt GO_REF:0000043 NCBI chr18:38,082,626...38,183,354
Ensembl chr18:38,068,303...38,284,645
JBrowse link
G SGO1 shugoshin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:7,137,891...7,153,202
Ensembl chr13:7,137,896...7,153,170
JBrowse link
G SGO2 shugoshin 2 is_active_in
located_in
IBA
ISO
(PMID:18084284) GO_Central
UniProt
PMID:18084284 GO_REF:0000033 NCBI chr15:104,099,378...104,150,723
Ensembl chr15:104,099,384...104,150,720
JBrowse link
G SIN3A SIN3 transcription regulator family member A located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:58,171,821...58,246,126
Ensembl chr 7:58,176,167...58,245,971
JBrowse link
G SKA1 spindle and kinetochore associated complex subunit 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:99,976,354...99,993,492
Ensembl chr 1:99,976,485...99,993,462
JBrowse link
G SKA2 spindle and kinetochore associated complex subunit 2 located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chr12:35,396,565...35,433,294
Ensembl chr12:35,396,567...35,433,299
JBrowse link
G SKA3 spindle and kinetochore associated complex subunit 3 located_in
is_active_in
IEA
IBA
Ensembl
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr11:1,302,880...1,321,132
Ensembl chr11:1,302,886...1,320,981
JBrowse link
G SMC1A structural maintenance of chromosomes 1A located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:46,143,738...46,202,187
Ensembl chr  X:46,144,920...46,218,543
JBrowse link
G SPAG5 sperm associated antigen 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,827,947...44,848,527
Ensembl chr12:44,827,949...44,848,566
JBrowse link
G SPC24 SPC24 component of NDC80 kinetochore complex located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chr 2:69,884,304...69,890,314
Ensembl chr 2:69,880,583...69,890,255
JBrowse link
G SPC25 SPC25 component of NDC80 kinetochore complex located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr15:75,339,171...75,371,275
Ensembl chr15:75,336,514...75,371,277
JBrowse link
G SPDL1 spindle apparatus coiled-coil protein 1 located_in IEA UniProt GO_REF:0000043 NCBI chr16:54,276,943...54,303,465
Ensembl chr16:54,277,052...54,303,544
JBrowse link
G SPOUT1 SPOUT domain containing methyltransferase 1 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 1:269,157,173...269,167,154
Ensembl chr 1:269,157,176...269,167,087
JBrowse link
G SS18L1 SS18L1 subunit of BAF chromatin remodeling complex located_in IEA Ensembl GO_REF:0000107 NCBI chr17:61,571,619...61,598,104
Ensembl chr17:61,571,614...61,598,099
JBrowse link
G SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone located_in IEA Ensembl GO_REF:0000107 NCBI chr11:25,905,442...25,960,665
Ensembl chr11:25,906,010...25,954,210
JBrowse link
G TEX14 testis expressed 14, intercellular bridge forming factor located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr12:34,815,472...34,975,901
Ensembl chr12:34,815,476...34,912,766
JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:127,958,500...128,032,370
Ensembl chr 1:127,959,213...128,028,712
JBrowse link
G TPR translocated promoter region, nuclear basket protein NOT|located_in ISO
IEA
(PMID:19273613) UniProt
Ensembl
PMID:19273613 GO_REF:0000107 NCBI chr 9:127,481,678...127,540,393
Ensembl chr 9:127,481,684...127,540,398
JBrowse link
G TRAPPC12 trafficking protein particle complex subunit 12 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:131,307,185...131,357,996
Ensembl chr 3:131,307,208...131,357,994
JBrowse link
G TTK TTK protein kinase located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 1:86,076,576...86,125,334
Ensembl chr 1:86,076,583...86,125,718
JBrowse link
G XPO1 exportin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:80,255,016...80,300,260
Ensembl chr 3:80,255,146...80,300,327
JBrowse link
G ZDHHC20 zinc finger DHHC-type palmitoyltransferase 20 located_in IEA UniProt GO_REF:0000043 NCBI chr11:1,326,646...1,405,867
Ensembl chr11:1,328,110...1,405,872
JBrowse link
G ZNF207 zinc finger protein 207 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr12:42,576,534...42,602,789
Ensembl chr12:42,576,532...42,612,396
JBrowse link
G ZNF276 zinc finger protein 276 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 6:298,034...316,451
Ensembl chr 6:298,039...313,403
JBrowse link
G ZW10 zw10 kinetochore protein located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr 9:41,358,801...41,400,254
Ensembl chr 9:41,348,896...41,400,208
JBrowse link
G ZWILCH zwilch kinetochore protein located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr 1:164,481,784...164,526,843
Ensembl chr 1:164,481,964...164,527,223
JBrowse link
G ZWINT ZW10 interacting kinetochore protein located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr14:94,094,781...94,109,447
Ensembl chr14:94,094,894...94,102,060
JBrowse link
Knl1/Spc105 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KNL1 kinetochore scaffold 1 part_of ISO (PMID:27881301) UniProt PMID:27881301 NCBI chr 1:130,652,493...130,728,989 JBrowse link
G ZWINT ZW10 interacting kinetochore protein part_of IEA Ensembl GO_REF:0000107 NCBI chr14:94,094,781...94,109,447
Ensembl chr14:94,094,894...94,102,060
JBrowse link
late recombination nodule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLH1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:21,791,276...21,877,789
Ensembl chr13:21,791,203...21,877,757
JBrowse link
lateral element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:53,317,515...53,412,649
Ensembl chr 7:53,317,540...53,412,645
JBrowse link
G BRCA1 BRCA1 DNA repair associated located_in IEA Ensembl GO_REF:0000107 NCBI chr12:19,788,087...19,854,515
Ensembl chr12:19,786,020...19,854,668
JBrowse link
G BRCA2 BRCA2 DNA repair associated located_in ISO (PMID:9774970) MGI PMID:9774970 NCBI chr11:8,805,950...8,858,128
Ensembl chr11:8,805,913...8,857,793
JBrowse link
G DMC1 DNA meiotic recombinase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:9,431,236...9,470,333
Ensembl chr 5:9,431,177...9,470,113
JBrowse link
G INCENP inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:9,411,942...9,445,825
Ensembl chr 2:9,411,942...9,445,821
JBrowse link
G KASH5 KASH domain containing 5 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 6:54,476,989...54,501,099
Ensembl chr 6:54,477,058...54,500,887
JBrowse link
G MEI4 meiotic double-stranded break formation protein 4 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 1:88,188,920...88,399,072
Ensembl chr 1:88,189,903...88,399,137
JBrowse link
G RAD21L1 RAD21 cohesin complex component like 1 located_in ISO (PMID:21743440) MGI PMID:21743440 NCBI chr17:34,035,526...34,064,215 JBrowse link
G RAD51 RAD51 recombinase located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,592,414...130,640,326
Ensembl chr 1:130,586,665...130,640,136
JBrowse link
G REC8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,118,743...75,127,759
Ensembl chr 7:75,118,744...75,125,537
JBrowse link
G RPA1 replication protein A1 located_in ISO (PMID:21743440), (PMID:22711701) MGI PMID:21743440 PMID:22711701 NCBI chr12:48,009,652...48,048,744
Ensembl chr12:48,009,719...48,048,741
JBrowse link
G SMC1A structural maintenance of chromosomes 1A ISO MMO:0000662 RGD PMID:10652260 RGD:1331378 NCBI chr  X:46,143,738...46,202,187
Ensembl chr  X:46,144,920...46,218,543
JBrowse link
G SMC1B structural maintenance of chromosomes 1B located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:3,976,098...4,067,148
Ensembl chr 5:3,976,140...4,067,395
JBrowse link
G SMC3 structural maintenance of chromosomes 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:120,969,629...121,008,924
Ensembl chr14:120,969,631...121,021,497
JBrowse link
G STAG3 STAG3 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:8,175,908...8,211,898
Ensembl chr 3:8,175,915...8,211,889
JBrowse link
G SYCP2 synaptonemal complex protein 2 is_active_in
located_in
IBA
IEA
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000107 NCBI chr17:59,875,992...59,962,314
Ensembl chr17:59,875,993...59,955,209
JBrowse link
G SYCP2L synaptonemal complex protein 2 like is_active_in
located_in
IBA
ISO
(PMID:26362258) GO_Central
MGI
PMID:26362258 GO_REF:0000033 NCBI chr 7:7,574,153...7,647,874
Ensembl chr 7:7,574,372...7,640,989
JBrowse link
G SYCP3 synaptonemal complex protein 3 located_in ISO PMID:9933407
(PMID:10678170), (PMID:18802469), (PMID:19283064), (PMID:21539824), (PMID:21743440), (PMID:22011390), (PMID:22711701), (PMID:22854038), (PMID:23133398), (PMID:23555294), (PMID:25533956), (PMID:25675407)
UniProt
MGI
PMID:9933407 PMID:10678170 PMID:18802469 PMID:19283064 PMID:21539824 More... RGD:11035335 NCBI chr 5:82,492,744...82,501,068
Ensembl chr 5:82,493,034...82,501,656
JBrowse link
MIS12/MIND type complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BGLAP bone gamma-carboxyglutamate protein part_of ISO (PMID:16585270), (PMID:20819937), (PMID:27881301) UniProt PMID:16585270 PMID:20819937 PMID:27881301 NCBI chr 4:93,807,703...93,808,806
Ensembl chr 4:93,807,706...93,808,968
JBrowse link
G DSN1 DSN1 component of MIS12 kinetochore complex part_of IEA
IBA
Ensembl
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr17:39,992,769...40,017,388
Ensembl chr17:39,990,624...40,017,365
JBrowse link
G MIS12 MIS12 kinetochore complex component part_of IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr12:51,505,376...51,508,337
Ensembl chr12:51,505,381...51,507,943
JBrowse link
G NSL1 NSL1 component of MIS12 kinetochore complex part_of IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 9:130,599,901...130,668,935
Ensembl chr 9:130,622,331...130,668,936
JBrowse link
G PMF1 polyamine modulated factor 1 part_of IEA
IBA
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 4:93,810,863...93,836,786
Ensembl chr 4:93,810,507...93,837,652
JBrowse link
Mis6-Sim4 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CENPO centromere protein O part_of IBA GO_Central GO_REF:0000033 NCBI chr 3:113,968,735...113,979,201
Ensembl chr 3:113,968,902...113,979,148
JBrowse link
Ndc80 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NDC80 NDC80 kinetochore complex component part_of IEA
IBA
Ensembl
GO_Central
UniProt
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 6:104,000,794...104,055,785
Ensembl chr 6:103,999,034...104,055,760
JBrowse link
G NUF2 NUF2 component of NDC80 kinetochore complex part_of IEA
IBA
Ensembl
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:87,162,873...87,194,193
Ensembl chr 4:87,162,818...87,194,170
JBrowse link
G SPC24 SPC24 component of NDC80 kinetochore complex part_of IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 2:69,884,304...69,890,314
Ensembl chr 2:69,880,583...69,890,255
JBrowse link
G SPC25 SPC25 component of NDC80 kinetochore complex part_of IEA
IBA
InterPro
Ensembl
GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr15:75,339,171...75,371,275
Ensembl chr15:75,336,514...75,371,277
JBrowse link
outer kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BGLAP bone gamma-carboxyglutamate protein part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chr 4:93,807,703...93,808,806
Ensembl chr 4:93,807,706...93,808,968
JBrowse link
G BOD1 biorientation of chromosomes in cell division 1 part_of ISO (PMID:17938248) UniProt PMID:17938248 NCBI chr16:50,734,510...50,743,417 JBrowse link
G BUB1 BUB1 mitotic checkpoint serine/threonine kinase part_of IEA Ensembl GO_REF:0000107 NCBI chr 3:45,585,188...45,623,240
Ensembl chr 3:45,585,226...45,624,543
JBrowse link
G BUB1B BUB1 mitotic checkpoint serine/threonine kinase B part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:131,093,026...131,143,840
Ensembl chr 1:131,092,958...131,143,794
JBrowse link
G CCNB1 cyclin B1 part_of IEA Ensembl GO_REF:0000107 NCBI chr16:47,338,239...47,348,385
Ensembl chr16:47,338,110...47,348,377
JBrowse link
G CENPE centromere protein E part_of ISO (PMID:19283064) MGI PMID:19283064 NCBI chr 8:117,888,968...117,965,325
Ensembl chr 8:117,888,970...117,965,252
JBrowse link
G CENPF centromere protein F part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:128,948,386...129,012,241
Ensembl chr 9:128,948,498...129,012,218
JBrowse link
G CREBBP CREB binding protein part_of ISO (PMID:14519686) MGI PMID:14519686 NCBI chr 3:38,388,366...38,530,243
Ensembl chr 3:38,388,547...38,530,224
JBrowse link
G DSN1 DSN1 component of MIS12 kinetochore complex part_of IEA Ensembl GO_REF:0000107 NCBI chr17:39,992,769...40,017,388
Ensembl chr17:39,990,624...40,017,365
JBrowse link
G KNL1 kinetochore scaffold 1 part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chr 1:130,652,493...130,728,989 JBrowse link
G MIS12 MIS12 kinetochore complex component part_of IEA Ensembl GO_REF:0000107 NCBI chr12:51,505,376...51,508,337
Ensembl chr12:51,505,381...51,507,943
JBrowse link
G NDC80 NDC80 kinetochore complex component part_of IEA Ensembl GO_REF:0000107 NCBI chr 6:104,000,794...104,055,785
Ensembl chr 6:103,999,034...104,055,760
JBrowse link
G NSL1 NSL1 component of MIS12 kinetochore complex part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:130,599,901...130,668,935
Ensembl chr 9:130,622,331...130,668,936
JBrowse link
G NUF2 NUF2 component of NDC80 kinetochore complex part_of IEA Ensembl GO_REF:0000107 NCBI chr 4:87,162,873...87,194,193
Ensembl chr 4:87,162,818...87,194,170
JBrowse link
G PLK1 polo like kinase 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 3:22,537,814...22,550,901
Ensembl chr 3:22,537,831...22,552,380
JBrowse link
G PMF1 polyamine modulated factor 1 part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chr 4:93,810,863...93,836,786
Ensembl chr 4:93,810,507...93,837,652
JBrowse link
G SKA1 spindle and kinetochore associated complex subunit 1 part_of IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 1:99,976,354...99,993,492
Ensembl chr 1:99,976,485...99,993,462
JBrowse link
G SKA2 spindle and kinetochore associated complex subunit 2 part_of IEA
IBA
InterPro
GO_Central
Ensembl
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr12:35,396,565...35,433,294
Ensembl chr12:35,396,567...35,433,299
JBrowse link
G SKA3 spindle and kinetochore associated complex subunit 3 part_of IEA
IBA
Ensembl
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr11:1,302,880...1,321,132
Ensembl chr11:1,302,886...1,320,981
JBrowse link
G SPC24 SPC24 component of NDC80 kinetochore complex part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:69,884,304...69,890,314
Ensembl chr 2:69,880,583...69,890,255
JBrowse link
G SPC25 SPC25 component of NDC80 kinetochore complex part_of IEA Ensembl GO_REF:0000107 NCBI chr15:75,339,171...75,371,275
Ensembl chr15:75,336,514...75,371,277
JBrowse link
G SPDL1 spindle apparatus coiled-coil protein 1 part_of IEA
IBA
UniProt
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr16:54,276,943...54,303,465
Ensembl chr16:54,277,052...54,303,544
JBrowse link
G ZDHHC20 zinc finger DHHC-type palmitoyltransferase 20 part_of IEA InterPro GO_REF:0000002 NCBI chr11:1,326,646...1,405,867
Ensembl chr11:1,328,110...1,405,872
JBrowse link
G ZWINT ZW10 interacting kinetochore protein part_of IEA Ensembl GO_REF:0000107 NCBI chr14:94,094,781...94,109,447
Ensembl chr14:94,094,894...94,102,060
JBrowse link
recombination nodule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MSH4 mutS homolog 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:137,410,820...137,524,459
Ensembl chr 6:137,410,691...137,534,233
JBrowse link
RZZ complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KNTC1 kinetochore associated 1 part_of IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr14:30,154,918...30,241,988
Ensembl chr14:30,153,702...30,241,829
JBrowse link
G ZW10 zw10 kinetochore protein part_of IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 9:41,358,801...41,400,254
Ensembl chr 9:41,348,896...41,400,208
JBrowse link
G ZWILCH zwilch kinetochore protein part_of IEA
IBA
InterPro
Ensembl
UniProt
GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 1:164,481,784...164,526,843
Ensembl chr 1:164,481,964...164,527,223
JBrowse link
SKA complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SKA1 spindle and kinetochore associated complex subunit 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:99,976,354...99,993,492
Ensembl chr 1:99,976,485...99,993,462
JBrowse link
G SKA2 spindle and kinetochore associated complex subunit 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr12:35,396,565...35,433,294
Ensembl chr12:35,396,567...35,433,299
JBrowse link
G SKA3 spindle and kinetochore associated complex subunit 3 part_of IEA Ensembl GO_REF:0000107 NCBI chr11:1,302,880...1,321,132
Ensembl chr11:1,302,886...1,320,981
JBrowse link
Smc5-Smc6 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EID3 EP300 interacting inhibitor of differentiation 3 part_of IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr 5:80,221,334...80,234,567 JBrowse link
G NSMCE1 NSE1 homolog, SMC5-SMC6 complex component part_of IEA
IBA
UniProt
GO_Central
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 3:19,609,796...19,649,869
Ensembl chr 3:19,609,881...19,649,867
JBrowse link
G NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase part_of IEA
IBA
InterPro
GO_Central
Ensembl
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:14,359,323...14,598,192
Ensembl chr 4:14,358,651...14,598,077
JBrowse link
G NSMCE3 NSE3 homolog, SMC5-SMC6 complex component part_of ISO (PMID:18086888), (PMID:27427983) UniProt PMID:18086888 PMID:27427983 NCBI chr 1:144,469,617...144,474,026 JBrowse link
G NSMCE4A NSE4 homolog A, SMC5-SMC6 complex component part_of IEA
IBA
Ensembl
GO_Central
UniProt
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr14:131,592,624...131,609,221
Ensembl chr14:131,594,130...131,609,204
JBrowse link
G SMC5 structural maintenance of chromosomes 5 part_of IBA GO_Central GO_REF:0000033 NCBI chr 1:223,560,271...223,653,370 JBrowse link
G SMC6 structural maintenance of chromosomes 6 part_of IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 3:120,097,361...120,170,974
Ensembl chr 3:120,097,379...120,170,971
JBrowse link
synaptonemal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACYP1 acylphosphatase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:98,220,318...98,265,187
Ensembl chr 7:98,220,555...98,247,125
JBrowse link
G CCNB1IP1 cyclin B1 interacting protein 1 located_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 7:78,553,680...78,576,057
Ensembl chr 7:78,564,122...78,575,462
JBrowse link
G FKBP6 FKBP prolyl isomerase family member 6 (inactive) located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:10,659,456...10,716,210
Ensembl chr 3:10,669,664...10,682,618
JBrowse link
G HORMAD1 HORMA domain containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:98,447,298...98,469,650
Ensembl chr 4:98,449,891...98,469,650
JBrowse link
G HORMAD2 HORMA domain containing 2 located_in IEA Ensembl GO_REF:0000107 Ensembl chr14:47,072,091...47,161,889 JBrowse link
G HSPA2 heat shock protein family A (Hsp70) member 2 located_in ISO (PMID:8622925) MGI PMID:8622925 NCBI chr 7:88,607,140...88,609,947 JBrowse link
G INCENP inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:9,411,942...9,445,825
Ensembl chr 2:9,411,942...9,445,821
JBrowse link
G LIG3 DNA ligase 3 located_in ISO (PMID:9001252) MGI PMID:9001252 NCBI chr12:40,153,105...40,205,077
Ensembl chr12:40,153,397...40,183,622
JBrowse link
G MLH1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:21,791,276...21,877,789
Ensembl chr13:21,791,203...21,877,757
JBrowse link
G MSH4 mutS homolog 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:137,410,820...137,524,459
Ensembl chr 6:137,410,691...137,534,233
JBrowse link
G MSH5 mutS homolog 5 located_in ISO (PMID:16260499) MGI PMID:16260499 NCBI chr 7:23,852,864...23,872,760
Ensembl chr 7:23,852,918...23,872,760
JBrowse link
G P3H4 prolyl 3-hydroxylase family member 4 (inactive) ISO RGD PMID:1363622 RGD:633987 NCBI chr12:20,881,807...20,891,482
Ensembl chr12:20,882,344...20,891,484
JBrowse link
G PLK1 polo like kinase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:22,537,814...22,550,901
Ensembl chr 3:22,537,831...22,552,380
JBrowse link
G REC8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,118,743...75,127,759
Ensembl chr 7:75,118,744...75,125,537
JBrowse link
G RNF212 ring finger protein 212 located_in
is_active_in
IEA
IBA
InterPro
GO_Central
Ensembl
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:393,707...413,952
Ensembl chr 8:399,715...413,896
JBrowse link
G RNF212B ring finger protein 212B located_in IEA InterPro GO_REF:0000002 NCBI chr 7:75,798,895...75,831,455
Ensembl chr 7:75,796,882...75,829,620
JBrowse link
G SMC1A structural maintenance of chromosomes 1A ISO MMO:0000679 RGD PMID:10652260 RGD:1331378 NCBI chr  X:46,143,738...46,202,187
Ensembl chr  X:46,144,920...46,218,543
JBrowse link
G SMC1B structural maintenance of chromosomes 1B located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:3,976,098...4,067,148
Ensembl chr 5:3,976,140...4,067,395
JBrowse link
G SMC3 structural maintenance of chromosomes 3 ISO MMO:0000679 RGD PMID:10652260 RGD:1331378 NCBI chr14:120,969,629...121,008,924
Ensembl chr14:120,969,631...121,021,497
JBrowse link
G STAG3 STAG3 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:8,175,908...8,211,898
Ensembl chr 3:8,175,915...8,211,889
JBrowse link
G SYCE1 synaptonemal complex central element protein 1 located_in
is_active_in
IEA
IBA
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr14:141,726,708...141,737,830
Ensembl chr14:141,726,208...141,735,919
JBrowse link
G SYCP1 synaptonemal complex protein 1 located_in ISO
IEA
RGD
Ensembl
InterPro
PMID:8660935 GO_REF:0000002 GO_REF:0000107 RGD:9686370 NCBI chr 4:105,592,354...105,730,413
Ensembl chr 4:105,591,743...105,730,398
JBrowse link
G SYCP2 synaptonemal complex protein 2 located_in ISO
IEA
RGD
Ensembl
PMID:9592139 GO_REF:0000107 RGD:69387 NCBI chr17:59,875,992...59,962,314
Ensembl chr17:59,875,993...59,955,209
JBrowse link
G SYCP3 synaptonemal complex protein 3 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 5:82,492,744...82,501,068
Ensembl chr 5:82,493,034...82,501,656
JBrowse link
G SYN1 synapsin I located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:42,090,245...42,142,254
Ensembl chr  X:42,090,246...42,142,224
JBrowse link
G TEX11 testis expressed 11 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:56,543,933...56,925,104
Ensembl chr  X:56,544,560...56,925,779
JBrowse link
G TEX12 testis expressed 12 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:39,864,093...39,869,572
Ensembl chr 9:39,864,148...39,869,979
JBrowse link
transverse filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STAG3 STAG3 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:8,175,908...8,211,898
Ensembl chr 3:8,175,915...8,211,889
JBrowse link
G SYCP1 synaptonemal complex protein 1 is_active_in
located_in
ISO
IBA
IEA
RGD
GO_Central
Ensembl
PMID:1464329 GO_REF:0000033 GO_REF:0000107 RGD:729937 NCBI chr 4:105,592,354...105,730,413
Ensembl chr 4:105,591,743...105,730,398
JBrowse link
G SYCP3 synaptonemal complex protein 3 located_in ISO (PMID:15870106) MGI PMID:15870106 NCBI chr 5:82,492,744...82,501,068
Ensembl chr 5:82,493,034...82,501,656
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19752
    cellular anatomical structure 19507
      organelle 13516
        membraneless organelle 4972
          intracellular membraneless organelle 4972
            chromosome 1300
              condensed chromosome 262
                Smc5-Smc6 complex 7
                condensed chromosome, centromeric region + 164
                condensed nuclear chromosome + 78
paths to the root