Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:condensed chromosome
go back to main search page
Accession:GO:0000793 term browser browse the term
Definition:A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure.
Comment:Note that this term can be used to annotate gene products that localize to a mitotic chromosome in an organism that undergoes an 'open mitosis' in which the nuclear envelope breaks down during mitosis.
Synonyms:related_synonym: cytoplasmic mitotic chromosome;   metaphase chromosome;   mitotic chromosome


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
condensed chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8 A-kinase anchoring protein 8 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624901:2,452,506...2,471,714
Ensembl chrNW_004624901:2,451,369...2,487,031
JBrowse link
G Aurkc aurora kinase C located_in ISO (PMID:15670791) UniProt PMID:15670791 NCBI chrNW_004624832:1,090,060...1,094,814
Ensembl chrNW_004624832:1,088,996...1,094,827
JBrowse link
G Banf1 barrier to autointegration nuclear assembly factor 1 located_in
is_active_in
ISO
IEA
(PMID:28841419) RGD
TreeGrafter
Ensembl
UniProt
PMID:10393804 PMID:28841419 GO_REF:0000107 GO_REF:0000118 RGD:10054037 NCBI chrNW_004624767:20,435,143...20,436,830
Ensembl chrNW_004624767:20,434,955...20,436,640
JBrowse link
G Banf2 BANF family member 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:18,823,945...18,855,980
Ensembl chrNW_004624741:18,829,728...18,856,058
JBrowse link
G Baz1b bromodomain adjacent to zinc finger domain 1B located_in ISO (PMID:11980720) MGI PMID:11980720 NCBI chrNW_004624740:14,247,972...14,319,713
Ensembl chrNW_004624740:14,248,274...14,319,823
JBrowse link
G Brca1 BRCA1 DNA repair associated located_in ISO (PMID:12913077) MGI PMID:12913077 NCBI chrNW_004624795:1,186,043...1,238,986
Ensembl chrNW_004624795:1,188,136...1,241,964
JBrowse link
G Cdk2 cyclin dependent kinase 2 located_in ISO (PMID:17784788) MGI PMID:17784788 NCBI chrNW_004624802:12,076,443...12,082,608
Ensembl chrNW_004624802:12,076,443...12,082,630
JBrowse link
G Champ1 chromosome alignment maintaining phosphoprotein 1 located_in ISO (PMID:21063390) UniProt PMID:21063390 NCBI chrNW_004624793:109,854...121,461
Ensembl chrNW_004624793:111,025...113,526
JBrowse link
G Ctcf CCCTC-binding factor located_in ISO (PMID:16107875) UniProt PMID:16107875 NCBI chrNW_004624746:18,705,017...18,760,345
Ensembl chrNW_004624746:18,706,663...18,760,203
JBrowse link
G Esrrb estrogen related receptor beta located_in ISO (PMID:27723719) UniProt PMID:27723719 NCBI chrNW_004624734:25,261,493...25,369,092
Ensembl chrNW_004624734:25,261,493...25,430,045
JBrowse link
G Fancd2 FA complementation group D2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:4,577,663...4,671,086
Ensembl chrNW_004624731:4,611,963...4,671,765
JBrowse link
G Gtf2b general transcription factor IIB is_active_in ISO (PMID:24244602) MGI PMID:24244602 NCBI chrNW_004624742:8,687,002...8,721,505
Ensembl chrNW_004624742:8,686,537...8,723,399
JBrowse link
G Hmbs hydroxymethylbilane synthase located_in ISO strong staining of metaphase and anaphase chromatids RGD PMID:12917623 RGD:2301689 NCBI chrNW_004624784:14,467,515...14,474,954
Ensembl chrNW_004624784:14,467,533...14,474,954
JBrowse link
G Hmgb1 high mobility group box 1 located_in ISO (PMID:12925773) UniProt PMID:12925773 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184
JBrowse link
G Hmgb2 high mobility group box 2 located_in ISO (PMID:12925773) UniProt PMID:12925773 NCBI chrNW_004624769:4,834,998...4,837,111 JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 located_in ISO (PMID:10445843) UniProt PMID:10445843 NCBI chrNW_004624790:10,762,340...10,799,228
Ensembl chrNW_004624790:10,761,632...10,791,891
JBrowse link
G Lig4 DNA ligase 4 located_in ISO (PMID:12589063) UniProt PMID:12589063 NCBI chrNW_004624793:3,699,394...3,706,591
Ensembl chrNW_004624793:3,699,506...3,706,073
JBrowse link
G LOC101704237 histone-lysine N-methyltransferase SETMAR located_in ISO (PMID:18790802) UniProt PMID:18790802 NCBI chrNW_004624773:14,680,571...14,692,583 JBrowse link
G LOC101706296 core histone macro-H2A.1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:11,650,067...11,714,399
Ensembl chrNW_004624733:11,650,537...11,715,999
JBrowse link
G LOC101715424 tubulin alpha-1B chain-like is_active_in ISO (PMID:24244602) MGI PMID:24244602 NCBI chrNW_004624816:3,001,252...3,006,166 JBrowse link
G Mki67 marker of proliferation Ki-67 located_in
is_active_in
ISO (PMID:12355204)
(PMID:27362226), (PMID:28935370), (PMID:32879492), (PMID:35513709), (PMID:39153474)
MGI
UniProt
PMID:12355204 PMID:27362226 PMID:28935370 PMID:32879492 PMID:35513709 More... NCBI chrNW_004624737:18,935,686...18,963,907 JBrowse link
G Mlh1 mutL homolog 1 located_in ISO (PMID:12091911), (PMID:12913077)
(PMID:8673133)
MGI PMID:8673133 PMID:12091911 PMID:12913077 NCBI chrNW_004624788:15,110,436...15,160,462
Ensembl chrNW_004624788:15,110,658...15,160,535
JBrowse link
G Mlh3 mutL homolog 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:26,642,800...26,677,187
Ensembl chrNW_004624734:26,642,946...26,674,315
JBrowse link
G Msh4 mutS homolog 4 located_in ISO (PMID:10809667) MGI PMID:10809667 NCBI chrNW_004624742:21,098,102...21,167,472
Ensembl chrNW_004624742:21,098,101...21,167,398
JBrowse link
G Nanog Nanog homeobox NOT|located_in ISO (PMID:27723719) UniProt PMID:27723719 NCBI chrNW_004624860:5,026,203...5,037,219 JBrowse link
G Ncapd2 non-SMC condensin I complex subunit D2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624860:3,229,091...3,256,631
Ensembl chrNW_004624860:3,230,577...3,256,407
JBrowse link
G Ncapd3 non-SMC condensin II complex subunit D3 located_in ISO (PMID:21795393) MGI PMID:21795393 NCBI chrNW_004624812:8,708,061...8,782,282
Ensembl chrNW_004624812:8,709,735...8,782,200
JBrowse link
G Ncapg non-SMC condensin I complex subunit G located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624755:14,067,931...14,100,593
Ensembl chrNW_004624755:14,068,009...14,100,438
JBrowse link
G Ncaph2 non-SMC condensin II complex subunit H2 located_in ISO (PMID:21795393) MGI PMID:21795393 NCBI chrNW_004624752:257,885...268,971
Ensembl chrNW_004624752:258,039...268,737
JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase located_in ISO (PMID:10601332) MGI PMID:10601332 NCBI chrNW_004624743:20,834,664...21,178,933
Ensembl chrNW_004624743:20,988,916...21,178,933
JBrowse link
G Pes1 pescadillo ribosomal biogenesis factor 1 located_in ISO (PMID:12237316) MGI PMID:12237316 NCBI chrNW_004624747:6,932,691...6,947,599
Ensembl chrNW_004624747:6,933,081...6,947,423
JBrowse link
G Rad51 RAD51 recombinase located_in ISO (PMID:10809667), (PMID:12091911), (PMID:12591952), (PMID:12913077), (PMID:17291760) MGI PMID:10809667 PMID:12091911 PMID:12591952 PMID:12913077 PMID:17291760 NCBI chrNW_004624804:7,957,175...7,983,078
Ensembl chrNW_004624804:7,957,253...7,983,619
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624820:8,361,345...8,369,356
Ensembl chrNW_004624820:8,361,400...8,368,347
JBrowse link
G Rif1 replication timing regulatory factor 1 located_in ISO (PMID:15583028) BHF-UCL PMID:15583028 NCBI chrNW_004624866:5,619,758...5,680,165 JBrowse link
G Rpa1 replication protein A1 located_in ISO (PMID:12091911) MGI PMID:12091911 NCBI chrNW_004624786:4,547,889...4,604,605
Ensembl chrNW_004624786:4,547,962...4,604,290
JBrowse link
G Smarca5 SNF2 related chromatin remodeling ATPase 5 located_in ISO (PMID:12972596) UniProt PMID:12972596 NCBI chrNW_004624848:3,569,744...3,611,104 JBrowse link
G Smc2 structural maintenance of chromosomes 2 located_in ISO (PMID:12589063)
(PMID:21795393)
UniProt
MGI
PMID:12589063 PMID:21795393 NCBI chrNW_004624758:7,267,024...7,318,930
Ensembl chrNW_004624758:7,268,474...7,317,919
JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in ISO (PMID:10809667), (PMID:12091911), (PMID:12591952), (PMID:17784788), (PMID:19625504) MGI PMID:10809667 PMID:12091911 PMID:12591952 PMID:17784788 PMID:19625504 NCBI chrNW_004624750:6,345,112...6,358,724
Ensembl chrNW_004624750:6,349,400...6,358,180
JBrowse link
G Top3b DNA topoisomerase III beta located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:1,450,236...1,473,467
Ensembl chrNW_004624747:1,446,412...1,473,600
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 NOT|located_in ISO (PMID:12589063) UniProt PMID:12589063 NCBI chrNW_004624743:3,299,329...3,549,182
Ensembl chrNW_004624743:3,317,351...3,552,161
JBrowse link
central element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUNH14orf39 chromosome unknown C14orf39 homolog located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624734:40,656,054...40,701,404
Ensembl chrNW_004624734:40,656,132...40,702,148
JBrowse link
G Incenp inner centromere protein located_in ISO (PMID:12584241) MGI PMID:12584241 NCBI chrNW_004624926:405,354...422,492
Ensembl chrNW_004624926:407,362...419,566
JBrowse link
G Syce1 synaptonemal complex central element protein 1 located_in ISO (PMID:15944401), (PMID:22164254) HGNC-UCL PMID:15944401 PMID:22164254 NCBI chrNW_004624737:12,290,317...12,297,823
Ensembl chrNW_004624737:12,290,276...12,297,924
JBrowse link
G Syce2 synaptonemal complex central element protein 2 located_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624901:478,860...491,577 JBrowse link
G Syce3 synaptonemal complex central element protein 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:204,242...235,081
Ensembl chrNW_004624752:218,587...234,971
JBrowse link
G Sycp1 synaptonemal complex protein 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624772:10,524,656...10,699,894
Ensembl chrNW_004624772:10,525,203...10,699,560
JBrowse link
G Tex12 testis expressed 12 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624784:7,317,642...7,324,128
Ensembl chrNW_004624784:7,317,507...7,322,619
JBrowse link
checkpoint clamp complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hus1 HUS1 checkpoint clamp component part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624740:5,606,828...5,617,848
Ensembl chrNW_004624740:5,606,129...5,618,092
JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease part_of IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624759:19,994,660...20,001,545
Ensembl chrNW_004624759:19,994,696...20,001,541
JBrowse link
G Rad9a RAD9 checkpoint clamp component A part_of IEA UniProt
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624767:19,123,710...19,180,505
Ensembl chrNW_004624767:19,124,517...19,176,231
JBrowse link
G Rad9b RAD9 checkpoint clamp component B part_of IEA InterPro
UniProt
TreeGrafter
GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624747:21,360,253...21,399,223
Ensembl chrNW_004624747:21,360,240...21,399,075
JBrowse link
chiasma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 located_in ISO (PMID:17291760), (PMID:17696610), (PMID:21743440), (PMID:28031483), (PMID:30718482), (PMID:31839538) MGI PMID:17291760 PMID:17696610 PMID:21743440 PMID:28031483 PMID:30718482 More... NCBI chrNW_004624788:15,110,436...15,160,462
Ensembl chrNW_004624788:15,110,658...15,160,535
JBrowse link
G Mlh3 mutL homolog 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:26,642,800...26,677,187
Ensembl chrNW_004624734:26,642,946...26,674,315
JBrowse link
condensed chromosome, centromeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aurkb aurora kinase B located_in ISO (PMID:18195732), (PMID:19465021)
(PMID:14751927)
BHF-UCL
MGI
PMID:14751927 PMID:18195732 PMID:19465021 NCBI chrNW_004624786:10,769,797...10,775,142
Ensembl chrNW_004624786:10,765,610...10,775,112
JBrowse link
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase located_in ISO (PMID:18084284), (PMID:19965387) MGI PMID:18084284 PMID:19965387 NCBI chrNW_004624749:1,584,289...1,639,334
Ensembl chrNW_004624749:1,584,186...1,639,770
JBrowse link
G Cbx3 chromobox 3 located_in ISO (PMID:11124534) UniProt PMID:11124534 NCBI chrNW_004624739:4,331,948...4,342,353
Ensembl chrNW_004624739:4,332,975...4,343,155
JBrowse link
G Cebpb CCAAT enhancer binding protein beta located_in ISO (PMID:21122806) MGI PMID:21122806 NCBI chrNW_004624790:5,367,808...5,369,686
Ensembl chrNW_004624790:5,368,349...5,369,377
JBrowse link
G Cenpa centromere protein A located_in ISO (PMID:11682612)
(PMID:15242786)
BHF-UCL
MGI
PMID:11682612 PMID:15242786 NCBI chrNW_004624738:8,899,260...8,906,379
Ensembl chrNW_004624738:8,899,362...8,906,373
JBrowse link
G Cenpb centromere protein B located_in ISO (PMID:15242786) MGI PMID:15242786 NCBI chrNW_004624741:4,868,453...4,870,933
Ensembl chrNW_004624741:4,869,248...4,870,897
JBrowse link
G Cenpc centromere protein C located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624761:1,422,857...1,498,726 JBrowse link
G Cenpe centromere protein E located_in ISO (PMID:19465021) UniProt PMID:19465021 NCBI chrNW_004624830:4,930,533...4,986,437
Ensembl chrNW_004624830:4,930,555...4,986,076
JBrowse link
G Kmt5b lysine methyltransferase 5B located_in ISO (PMID:15145825) MGI PMID:15145825 NCBI chrNW_004624767:18,654,682...18,716,087
Ensembl chrNW_004624767:18,655,193...18,716,252
JBrowse link
G Kmt5c lysine methyltransferase 5C located_in ISO (PMID:15145825) MGI PMID:15145825 NCBI chrNW_004624832:1,945,194...1,951,016
Ensembl chrNW_004624832:1,945,193...1,951,247
JBrowse link
G Meikin meiotic kinetochore factor located_in ISO (PMID:25533956) MGI PMID:25533956 NCBI chrNW_004624733:40,161,901...40,243,260
Ensembl chrNW_004624733:40,162,071...40,243,544
JBrowse link
G Ncapd2 non-SMC condensin I complex subunit D2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624860:3,229,091...3,256,631
Ensembl chrNW_004624860:3,230,577...3,256,407
JBrowse link
G Ncapd3 non-SMC condensin II complex subunit D3 located_in IEA UniProt
TreeGrafter
GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624812:8,708,061...8,782,282
Ensembl chrNW_004624812:8,709,735...8,782,200
JBrowse link
G Ncapg non-SMC condensin I complex subunit G located_in ISO (PMID:21795393) MGI PMID:21795393 NCBI chrNW_004624755:14,067,931...14,100,593
Ensembl chrNW_004624755:14,068,009...14,100,438
JBrowse link
G Plk1 polo like kinase 1 located_in ISO (PMID:22854038) MGI PMID:22854038 NCBI chrNW_004624782:8,811,593...8,823,060
Ensembl chrNW_004624782:8,811,616...8,826,749
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624820:8,361,345...8,369,356
Ensembl chrNW_004624820:8,361,400...8,368,347
JBrowse link
G Sgo1 shugoshin 1 located_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004624821:5,497,620...5,514,661
Ensembl chrNW_004624821:5,498,386...5,511,796
JBrowse link
G Sgo2 shugoshin 2 located_in ISO (PMID:18084284), (PMID:18765791), (PMID:19283064), (PMID:25533956) MGI PMID:18084284 PMID:18765791 PMID:19283064 PMID:25533956 NCBI chrNW_004624889:540,680...563,110
Ensembl chrNW_004624889:540,008...559,035
JBrowse link
G Ss18l1 SS18L1 subunit of BAF chromatin remodeling complex located_in ISO (PMID:18283110), (PMID:18316482), (PMID:22164254), (PMID:24891606) MGI PMID:18283110 PMID:18316482 PMID:22164254 PMID:24891606 NCBI chrNW_004624741:28,017,400...28,064,617
Ensembl chrNW_004624741:28,017,400...28,049,456
JBrowse link
G Sycp2 synaptonemal complex protein 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:26,108,446...26,208,184
Ensembl chrNW_004624741:26,122,385...26,203,154
JBrowse link
G Sycp2l synaptonemal complex protein 2 like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624756:14,999,209...15,084,967
Ensembl chrNW_004624756:14,996,868...15,084,285
JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in ISO (PMID:22854038) MGI PMID:22854038 NCBI chrNW_004624750:6,345,112...6,358,724
Ensembl chrNW_004624750:6,349,400...6,358,180
JBrowse link
condensed nuclear chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Add3 adducin 3 located_in ISO (PMID:1864459) MGI PMID:1864459 NCBI chrNW_004624737:36,091,671...36,256,398 JBrowse link
G Ago3 argonaute RISC catalytic component 3 located_in ISO (PMID:22863743) MGI PMID:22863743 NCBI chrNW_004624764:18,948,469...19,078,247
Ensembl chrNW_004624764:18,948,484...19,052,523
JBrowse link
G Brca1 BRCA1 DNA repair associated located_in ISO (PMID:20551173), (PMID:26490168) MGI PMID:20551173 PMID:26490168 NCBI chrNW_004624795:1,186,043...1,238,986
Ensembl chrNW_004624795:1,188,136...1,241,964
JBrowse link
G Brd4 bromodomain containing 4 located_in ISO (PMID:10938129)
(PMID:10938129), (PMID:16339075), (PMID:18039861)
MGI PMID:10938129 PMID:16339075 PMID:18039861 NCBI chrNW_004624901:2,348,218...2,434,429
Ensembl chrNW_004624901:2,346,734...2,380,852
JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624825:4,842,246...4,860,758
Ensembl chrNW_004624825:4,853,388...4,860,217
JBrowse link
G Cdx2 caudal type homeobox 2 located_in ISO (PMID:15509711) MGI PMID:15509711 NCBI chrNW_004624776:10,551,503...10,556,987
Ensembl chrNW_004624776:10,551,503...10,556,845
JBrowse link
G Chek1 checkpoint kinase 1 located_in ISO (PMID:9382850) UniProt PMID:9382850 NCBI chrNW_004624927:1,609,404...1,643,409
Ensembl chrNW_004624927:1,610,878...1,643,409
JBrowse link
G Chmp1a charged multivesicular body protein 1A located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:302,344...309,117
Ensembl chrNW_004624746:302,404...309,644
JBrowse link
G Dmc1 DNA meiotic recombinase 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:9,547,327...9,585,549
Ensembl chrNW_004624752:9,548,015...9,585,958
JBrowse link
G Dnmt3l DNA methyltransferase 3 like located_in ISO (PMID:16543361) MGI PMID:16543361 NCBI chrNW_004624745:29,869,174...29,878,189
Ensembl chrNW_004624745:29,869,196...29,878,169
JBrowse link
G Hormad1 HORMA domain containing 1 located_in ISO (PMID:22164254), (PMID:22530760) MGI PMID:22164254 PMID:22530760 NCBI chrNW_004624772:18,379,154...18,403,456
Ensembl chrNW_004624772:18,379,745...18,403,745
JBrowse link
G Iho1 interactor of HORMAD1 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:3,208,648...3,249,281
Ensembl chrNW_004624730:3,215,447...3,239,060
JBrowse link
G Kifap3 kinesin associated protein 3 located_in ISO (PMID:16298999) BHF-UCL PMID:16298999 NCBI chrNW_004624805:10,381,217...10,521,349
Ensembl chrNW_004624805:10,416,095...10,504,234
JBrowse link
G Lig3 DNA ligase 3 located_in ISO (PMID:9001252) MGI PMID:9001252 NCBI chrNW_004624875:2,871,944...2,907,757
Ensembl chrNW_004624875:2,872,357...2,893,967
JBrowse link
G LOC101701891 histone H2AX located_in ISO (PMID:20551173), (PMID:22164254), (PMID:22711701), (PMID:23555294), (PMID:26490168) MGI PMID:20551173 PMID:22164254 PMID:22711701 PMID:23555294 PMID:26490168 NCBI chrNW_004624784:14,475,813...14,477,269
Ensembl chrNW_004624784:14,476,730...14,477,161
JBrowse link
G Lrpprc leucine rich pentatricopeptide repeat containing located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624738:25,340,588...25,452,593
Ensembl chrNW_004624738:25,338,098...25,452,676
JBrowse link
G Mlh1 mutL homolog 1 located_in ISO (PMID:18316482), (PMID:23555294), (PMID:24891606) MGI PMID:18316482 PMID:23555294 PMID:24891606 NCBI chrNW_004624788:15,110,436...15,160,462
Ensembl chrNW_004624788:15,110,658...15,160,535
JBrowse link
G Mlh3 mutL homolog 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:26,642,800...26,677,187
Ensembl chrNW_004624734:26,642,946...26,674,315
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease ISO sex vesicles/chromatin of XY bivalent RGD PMID:10855503 RGD:2300257 NCBI chrNW_004624735:39,095,559...39,153,936
Ensembl chrNW_004624735:39,092,781...39,153,920
JBrowse link
G Msh4 mutS homolog 4 located_in ISO (PMID:18316482), (PMID:22164254), (PMID:23555294) MGI PMID:18316482 PMID:22164254 PMID:23555294 NCBI chrNW_004624742:21,098,102...21,167,472
Ensembl chrNW_004624742:21,098,101...21,167,398
JBrowse link
G Ncapd2 non-SMC condensin I complex subunit D2 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chrNW_004624860:3,229,091...3,256,631
Ensembl chrNW_004624860:3,230,577...3,256,407
JBrowse link
G Ncapd3 non-SMC condensin II complex subunit D3 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chrNW_004624812:8,708,061...8,782,282
Ensembl chrNW_004624812:8,709,735...8,782,200
JBrowse link
G Ncapg2 non-SMC condensin II complex subunit G2 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chrNW_004624800:432,307...494,361
Ensembl chrNW_004624800:432,258...498,718
JBrowse link
G Ncaph non-SMC condensin I complex subunit H located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chrNW_004624749:2,411,952...2,439,981
Ensembl chrNW_004624749:2,411,970...2,444,446
JBrowse link
G Ncaph2 non-SMC condensin II complex subunit H2 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chrNW_004624752:257,885...268,971
Ensembl chrNW_004624752:258,039...268,737
JBrowse link
G Nek2 NIMA related kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624771:17,334,782...17,351,609
Ensembl chrNW_004624771:17,334,681...17,352,259
JBrowse link
G Nifk nucleolar protein interacting with the FHA domain of MKI67 located_in ISO (PMID:11342549) UniProt PMID:11342549 NCBI chrNW_004624732:23,470,077...23,478,795
Ensembl chrNW_004624732:23,470,175...23,478,427
JBrowse link
G Nol6 nucleolar protein 6 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:38,211,389...38,236,793
Ensembl chrNW_004624736:38,212,437...38,227,288
JBrowse link
G Psmc3ip PSMC3 interacting protein located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:1,535,350...1,540,249
Ensembl chrNW_004624795:1,536,148...1,539,866
JBrowse link
G Rad21 RAD21 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624763:15,131,106...15,157,512
Ensembl chrNW_004624763:15,131,005...15,158,155
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 located_in ISO (PMID:24797475) MGI PMID:24797475 NCBI chrNW_004624741:2,486,612...2,542,452
Ensembl chrNW_004624741:2,485,471...2,542,500
JBrowse link
G Rad50 RAD50 double strand break repair protein located_in ISO
IEA
sex vesicles/chromatin of XY bivalent RGD
TreeGrafter
PMID:10855503 GO_REF:0000118 RGD:2300257 NCBI chrNW_004624733:39,445,083...39,544,415
Ensembl chrNW_004624733:39,447,461...39,544,409
JBrowse link
G Rad51 RAD51 recombinase located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624804:7,957,175...7,983,078
Ensembl chrNW_004624804:7,957,253...7,983,619
JBrowse link
G Rcc1 regulator of chromosome condensation 1 located_in ISO (PMID:15014043) UniProt PMID:15014043 NCBI chrNW_004624764:12,316,976...12,360,673
Ensembl chrNW_004624764:12,326,738...12,362,213
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624820:8,361,345...8,369,356
Ensembl chrNW_004624820:8,361,400...8,368,347
JBrowse link
G Rpa1 replication protein A1 located_in ISO (PMID:18283110), (PMID:18316482), (PMID:20551173), (PMID:22164254) MGI PMID:18283110 PMID:18316482 PMID:20551173 PMID:22164254 NCBI chrNW_004624786:4,547,889...4,604,605
Ensembl chrNW_004624786:4,547,962...4,604,290
JBrowse link
G Rrs1 ribosome biogenesis regulator 1 homolog located_in ISO (PMID:19465021) UniProt PMID:19465021 NCBI chrNW_004624744:24,914,717...24,916,940
Ensembl chrNW_004624744:24,915,703...24,916,800
JBrowse link
G Rsph1 radial spoke head component 1 located_in ISO (PMID:9578619) MGI PMID:9578619 NCBI chrNW_004624745:28,009,028...28,020,007
Ensembl chrNW_004624745:28,008,959...28,021,529
JBrowse link
G Shoc1 shortage in chiasmata 1 located_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624760:23,220,294...23,332,094
Ensembl chrNW_004624760:23,249,730...23,332,198
JBrowse link
G Smc1b structural maintenance of chromosomes 1B located_in ISO (PMID:22164254) MGI PMID:22164254 NCBI chrNW_004624752:4,255,829...4,320,257
Ensembl chrNW_004624752:4,255,897...4,320,665
JBrowse link
G Smc2 structural maintenance of chromosomes 2 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chrNW_004624758:7,267,024...7,318,930
Ensembl chrNW_004624758:7,268,474...7,317,919
JBrowse link
G Smc4 structural maintenance of chromosomes 4 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chrNW_004624730:38,145,101...38,178,788 JBrowse link
G Stag3 STAG3 cohesin complex component located_in ISO (PMID:22164254), (PMID:24797475) MGI PMID:22164254 PMID:24797475 NCBI chrNW_004624740:16,706,695...16,734,142
Ensembl chrNW_004624740:16,707,999...16,732,537
JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 located_in ISO (PMID:17452644) MGI PMID:17452644 NCBI chrNW_004624752:9,396,860...9,414,345
Ensembl chrNW_004624752:9,396,860...9,415,462
JBrowse link
G Sycp1 synaptonemal complex protein 1 located_in ISO (PMID:22854038), (PMID:22863743), (PMID:24589552), (PMID:24891606) MGI PMID:22854038 PMID:22863743 PMID:24589552 PMID:24891606 NCBI chrNW_004624772:10,524,656...10,699,894
Ensembl chrNW_004624772:10,525,203...10,699,560
JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in ISO (PMID:18316482), (PMID:21621532), (PMID:22863743), (PMID:24589552), (PMID:24891606) MGI PMID:18316482 PMID:21621532 PMID:22863743 PMID:24589552 PMID:24891606 NCBI chrNW_004624750:6,345,112...6,358,724
Ensembl chrNW_004624750:6,349,400...6,358,180
JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 located_in ISO (PMID:14718568) MGI PMID:14718568 NCBI chrNW_004624730:9,916,717...9,994,666
Ensembl chrNW_004624730:9,914,140...9,994,775
JBrowse link
G Ttn titin located_in ISO (PMID:9548712) BHF-UCL PMID:9548712 NCBI chrNW_004624844:484,593...760,155 JBrowse link
inner kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpc centromere protein C part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004624761:1,422,857...1,498,726 JBrowse link
G Cenph centromere protein H part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004624905:71,005...97,343
Ensembl chrNW_004624905:70,373...97,343
JBrowse link
G Cenpi centromere protein I part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624902:1,391,144...1,500,323
Ensembl chrNW_004624814:8,820,811...8,823,072
JBrowse link
G Cenpk centromere protein K part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624815:4,311,929...4,427,278
Ensembl chrNW_004624815:4,311,942...4,366,442
JBrowse link
G Cenpl centromere protein L part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004624771:8,034,225...8,051,451
Ensembl chrNW_004624771:8,036,701...8,051,998
JBrowse link
G Cenpm centromere protein M part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004624752:6,781,504...6,790,520
Ensembl chrNW_004624752:6,781,529...6,790,518
JBrowse link
G Cenpn centromere protein N part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004624746:6,309,194...6,331,152
Ensembl chrNW_004624746:6,306,521...6,330,898
JBrowse link
G Cenpo centromere protein O part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004624738:7,147,824...7,170,287
Ensembl chrNW_004624738:7,148,294...7,162,183
JBrowse link
G Cenpp centromere protein P part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004624868:3,780,864...4,031,972 JBrowse link
G Cenpq centromere protein Q part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004624783:1,825,234...1,838,794
Ensembl chrNW_004624783:1,826,368...1,836,263
JBrowse link
G Cenps centromere protein S part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004624818:2,244,114...2,256,870
Ensembl chrNW_004624818:2,249,369...2,256,834
JBrowse link
G Cenpt centromere protein T part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004624746:18,530,574...18,538,437
Ensembl chrNW_004624746:18,532,732...18,538,326
JBrowse link
G Cenpu centromere protein U part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004624769:15,450,423...15,491,393 JBrowse link
G Cenpw centromere protein W part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624753:888,495...896,617
Ensembl chrNW_004624753:887,689...896,931
JBrowse link
G Cenpx centromere protein X part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004624801:10,851,916...10,854,816
Ensembl chrNW_004624801:10,851,916...10,854,807
JBrowse link
G Itgb3bp integrin subunit beta 3 binding protein part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004624742:30,638,885...30,694,362
Ensembl chrNW_004624742:30,639,358...30,691,265
JBrowse link
G LOC101699418 histone H3.3 part_of ISO (PMID:25645018) MGI PMID:25645018 NCBI chrNW_004624807:194,372...203,205 JBrowse link
G Orc2 origin recognition complex subunit 2 part_of ISO (PMID:14519686) MGI PMID:14519686 NCBI chrNW_004624889:224,658...269,815
Ensembl chrNW_004624889:227,510...268,784
JBrowse link
kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahctf1 AT-hook containing transcription factor 1 located_in ISO (PMID:17098863) UniProt PMID:17098863 NCBI chrNW_004624771:12,785,656...12,863,797
Ensembl chrNW_004624771:12,795,243...12,863,813
JBrowse link
G Anapc16 anaphase promoting complex subunit 16 located_in IEA Ensembl
TreeGrafter
UniProt
GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624754:6,009,255...6,031,023
Ensembl chrNW_004624754:6,009,151...6,023,908
JBrowse link
G Apc APC regulator of WNT signaling pathway located_in ISO (PMID:11283619) UniProt PMID:11283619 NCBI chrNW_004624743:30,517,034...30,635,740
Ensembl chrNW_004624743:30,546,323...30,635,737
JBrowse link
G Aurkb aurora kinase B part_of
is_active_in
ISO (PMID:22024163)
(PMID:26829474)
CACAO
UniProt
PMID:22024163 PMID:26829474 NCBI chrNW_004624786:10,769,797...10,775,142
Ensembl chrNW_004624786:10,765,610...10,775,112
JBrowse link
G Birc5 baculoviral IAP repeat containing 5 located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624801:7,727,084...7,735,946
Ensembl chrNW_004624801:7,727,093...7,735,940
JBrowse link
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase located_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004624749:1,584,289...1,639,334
Ensembl chrNW_004624749:1,584,186...1,639,770
JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004624804:7,477,046...7,533,322
Ensembl chrNW_004624804:7,492,799...7,533,408
JBrowse link
G Bub3 BUB3 mitotic checkpoint protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:23,847,449...23,860,382
Ensembl chrNW_004624737:23,847,785...23,860,603
JBrowse link
G Cbx5 chromobox 5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624904:2,273,054...2,313,723
Ensembl chrNW_004624904:2,276,036...2,296,706
JBrowse link
G Cdc20 cell division cycle 20 located_in ISO (PMID:32666501), (PMID:33898437) UniProt PMID:32666501 PMID:33898437 NCBI chrNW_004624892:2,675,980...2,679,709
Ensembl chrNW_004624892:2,675,754...2,679,793
JBrowse link
G Cdt1 chromatin licensing and DNA replication factor 1 located_in ISO (PMID:22581055) CAFA PMID:22581055 NCBI chrNW_004624746:808,463...813,464
Ensembl chrNW_004624746:809,252...812,993
JBrowse link
G Cenpc centromere protein C located_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624761:1,422,857...1,498,726 JBrowse link
G Cenpe centromere protein E located_in ISO (PMID:11682612), (PMID:12925705), (PMID:25395579), (PMID:25918224), (PMID:9763420)
(PMID:12925705), (PMID:17938250), (PMID:18765791)
UniProt
MGI
PMID:9763420 PMID:11682612 PMID:12925705 PMID:17938250 PMID:18765791 More... NCBI chrNW_004624830:4,930,533...4,986,437
Ensembl chrNW_004624830:4,930,555...4,986,076
JBrowse link
G Cenpf centromere protein F located_in
NOT|located_in
ISO (PMID:17363900), (PMID:7542657), (PMID:9763420)
(PMID:10373470)
UniProt
MGI
PMID:7542657 PMID:9763420 PMID:10373470 PMID:17363900 NCBI chrNW_004624771:19,657,489...19,702,506
Ensembl chrNW_004624771:19,656,981...19,702,625
JBrowse link
G Cenph centromere protein H located_in IEA InterPro
TreeGrafter
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624905:71,005...97,343
Ensembl chrNW_004624905:70,373...97,343
JBrowse link
G Cenpi centromere protein I located_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624902:1,391,144...1,500,323
Ensembl chrNW_004624814:8,820,811...8,823,072
JBrowse link
G Cenpo centromere protein O located_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624738:7,147,824...7,170,287
Ensembl chrNW_004624738:7,148,294...7,162,183
JBrowse link
G Cenpt centromere protein T located_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624746:18,530,574...18,538,437
Ensembl chrNW_004624746:18,532,732...18,538,326
JBrowse link
G Cenpv centromere protein V located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624877:4,075,029...4,102,164
Ensembl chrNW_004624877:4,075,315...4,101,885
JBrowse link
G Cenpw centromere protein W located_in IEA Ensembl
TreeGrafter
UniProt
GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624753:888,495...896,617
Ensembl chrNW_004624753:887,689...896,931
JBrowse link
G Cfdp1 craniofacial development protein 1 located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624746:11,489,462...11,631,861
Ensembl chrNW_004624746:11,489,274...11,632,085
JBrowse link
G Champ1 chromosome alignment maintaining phosphoprotein 1 located_in ISO (PMID:21063390) UniProt PMID:21063390 NCBI chrNW_004624793:109,854...121,461
Ensembl chrNW_004624793:111,025...113,526
JBrowse link
G Chmp1a charged multivesicular body protein 1A located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:302,344...309,117
Ensembl chrNW_004624746:302,404...309,644
JBrowse link
G Chmp1b charged multivesicular body protein 1B located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004624770:19,487,040...19,489,740 JBrowse link
G Chmp2a charged multivesicular body protein 2A located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004624832:45,293...48,314 JBrowse link
G Chmp2b charged multivesicular body protein 2B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624789:3,557,811...3,587,814
Ensembl chrNW_004624789:3,557,797...3,587,703
JBrowse link
G Chmp3 charged multivesicular body protein 3 located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004624749:16,738,538...16,772,553
Ensembl chrNW_004624749:16,738,416...16,772,391
JBrowse link
G Chmp4a charged multivesicular body protein 4A located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004624820:8,281,081...8,284,969 JBrowse link
G Chmp4b charged multivesicular body protein 4B located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004624842:5,454,616...5,505,454
Ensembl chrNW_004624842:5,450,900...5,505,418
JBrowse link
G Chmp4c charged multivesicular body protein 4C located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004624744:9,735,585...9,769,635
Ensembl chrNW_004624744:9,739,651...9,769,615
JBrowse link
G Chmp5 charged multivesicular body protein 5 located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004624736:38,025,247...38,044,808 JBrowse link
G Chmp6 charged multivesicular body protein 6 located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004624801:10,063,284...10,070,322
Ensembl chrNW_004624801:10,063,614...10,070,320
JBrowse link
G Chmp7 charged multivesicular body protein 7 located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004624758:18,524,338...18,538,909
Ensembl chrNW_004624758:18,524,290...18,538,083
JBrowse link
G Ckap5 cytoskeleton associated protein 5 located_in ISO (PMID:25596274) UniProt PMID:25596274 NCBI chrNW_004624767:1,761,983...1,874,534
Ensembl chrNW_004624767:1,761,733...1,874,534
JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 located_in ISO
IEA
MMO:0000538 RGD
TreeGrafter
UniProt
PMID:28351621 GO_REF:0000043 GO_REF:0000118 RGD:27096077 NCBI chrNW_004624732:23,553,876...23,814,565
Ensembl chrNW_004624732:23,581,356...23,811,640
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624788:11,441,840...11,657,515
Ensembl chrNW_004624788:11,441,747...11,573,029
JBrowse link
G Dctn1 dynactin subunit 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:29,105,310...29,135,124
Ensembl chrNW_004624749:29,115,561...29,137,276
JBrowse link
G Dctn2 dynactin subunit 2 located_in ISO (PMID:8647893) RGD
UniProt
PMID:8647893 RGD:1331348 NCBI chrNW_004624802:10,412,466...10,429,354 JBrowse link
G Dctn4 dynactin subunit 4 ISO RGD PMID:10607597 RGD:70710 NCBI chrNW_004624774:9,951,520...9,986,194
Ensembl chrNW_004624774:9,951,228...9,986,164
JBrowse link
G Dctn6 dynactin subunit 6 located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624839:6,782,284...6,818,584
Ensembl chrNW_004624839:6,782,341...6,818,653
JBrowse link
G Dsn1 DSN1 component of MIS12 kinetochore complex located_in ISO (PMID:32483152)
(PMID:15371340)
MGI
WB
PMID:15371340 PMID:32483152 GO_REF:0000052 NCBI chrNW_004624842:2,738,739...2,762,968
Ensembl chrNW_004624842:2,738,734...2,760,783
JBrowse link
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 located_in ISO (PMID:19229290) UniProt PMID:19229290 NCBI chrNW_004624813:2,490,745...2,826,230
Ensembl chrNW_004624813:2,490,706...2,825,412
JBrowse link
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 located_in ISO (PMID:19229290) RGD
UniProt
PMID:19229290 PMID:21169557 RGD:13207422 NCBI chrNW_004624788:10,593,647...10,624,755
Ensembl chrNW_004624788:10,593,940...10,625,052
JBrowse link
G Dync1li2 dynein cytoplasmic 1 light intermediate chain 2 ISO RGD PMID:21169557 RGD:13207422 NCBI chrNW_004624746:19,727,861...19,752,220
Ensembl chrNW_004624746:19,728,018...19,750,640
JBrowse link
G Dynll1 dynein light chain LC8-type 1 located_in ISO (PMID:20133940) UniProt PMID:20133940 NCBI chrNW_004624747:13,169,865...13,172,592
Ensembl chrNW_004624747:13,169,865...13,172,525
JBrowse link
G Dynlt3 dynein light chain Tctex-type 3 located_in ISO
IEA
RGD
UniProt
PMID:17289665 GO_REF:0000043 RGD:8554144 NCBI chrNW_004624762:17,734,738...17,747,418
Ensembl chrNW_004624762:17,734,769...17,747,527
JBrowse link
G Fbxo28 F-box protein 28 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624835:5,835,906...5,863,972
Ensembl chrNW_004624835:5,835,767...5,864,328
JBrowse link
G Firrm FIGNL1 interacting regulator of recombination and mitosis located_in ISO (PMID:34260926) UniProt PMID:34260926 NCBI chrNW_004624826:7,704,256...7,749,222
Ensembl chrNW_004624826:7,703,798...7,749,091
JBrowse link
G Gpatch11 G-patch domain containing 11 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:18,696,583...18,710,669 JBrowse link
G Gtf2b general transcription factor IIB is_active_in ISO (PMID:24244602) MGI PMID:24244602 NCBI chrNW_004624742:8,687,002...8,721,505
Ensembl chrNW_004624742:8,686,537...8,723,399
JBrowse link
G Hjurp Holliday junction recognition protein located_in ISO (PMID:19410545) UniProt PMID:19410545 NCBI chrNW_004624847:166,511...179,881 JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U located_in ISO (PMID:21242313) UniProt PMID:21242313 NCBI chrNW_004624771:14,756,088...14,766,106
Ensembl chrNW_004624771:14,756,100...14,765,832
JBrowse link
G Hsf1 heat shock transcription factor 1 located_in ISO (PMID:18794143) UniProt PMID:18794143 NCBI chrNW_004624735:12,536,818...12,562,643
Ensembl chrNW_004624735:12,537,128...12,562,644
JBrowse link
G Incenp inner centromere protein located_in IEA UniProt
TreeGrafter
GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624926:405,354...422,492
Ensembl chrNW_004624926:407,362...419,566
JBrowse link
G Itgb3bp integrin subunit beta 3 binding protein located_in ISO (PMID:28795467) MGI PMID:28795467 NCBI chrNW_004624742:30,638,885...30,694,362
Ensembl chrNW_004624742:30,639,358...30,691,265
JBrowse link
G Kat2b lysine acetyltransferase 2B located_in ISO (PMID:14519686) MGI PMID:14519686 NCBI chrNW_004624821:5,387,212...5,489,013 JBrowse link
G Kat5 lysine acetyltransferase 5 located_in ISO (PMID:26829474) UniProt PMID:26829474 NCBI chrNW_004624767:20,668,759...20,675,367
Ensembl chrNW_004624767:20,666,763...20,675,164
JBrowse link
G Kat8 lysine acetyltransferase 8 located_in ISO (PMID:14519686) MGI PMID:14519686 NCBI chrNW_004624782:14,157,905...14,169,231
Ensembl chrNW_004624782:14,157,823...14,169,231
JBrowse link
G Kif18a kinesin family member 18A located_in ISO (PMID:20981276) MGI PMID:20981276 NCBI chrNW_004624766:17,565,072...17,622,342
Ensembl chrNW_004624766:17,564,560...17,622,932
JBrowse link
G Kif2c kinesin family member 2C located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624906:633,635...660,149
Ensembl chrNW_004624906:633,754...660,254
JBrowse link
G Knl1 kinetochore scaffold 1 located_in ISO (PMID:15371340), (PMID:19893618)
(PMID:35167144)
UniProt PMID:15371340 PMID:19893618 PMID:35167144 NCBI chrNW_004624804:7,884,580...7,952,567
Ensembl chrNW_004624804:7,889,689...7,952,384
JBrowse link
G LOC101698127 centromere protein H located_in IEA UniProt
InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624775:4,971,556...4,986,574 JBrowse link
G LOC101706757 polyamine-modulated factor 1 located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624885:1,517,617...1,526,434
Ensembl chrNW_004624885:1,517,539...1,526,429
JBrowse link
G LOC101707821 inactive serine/threonine-protein kinase TEX14-like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624757:25,089,260...25,091,904 JBrowse link
G LOC101708495 kinetochore-associated protein NSL1 homolog located_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624743:15,496,175...15,507,147 JBrowse link
G LOC101710885 isovaleryl-CoA dehydrogenase, mitochondrial located_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624804:7,687,531...7,722,497
Ensembl chrNW_004624804:7,709,300...7,722,930
JBrowse link
G LOC101715712 inactive serine/threonine-protein kinase TEX14 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624871:578,323...679,120 JBrowse link
G LOC101724174 spindle and kinetochore-associated protein 2-like located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624752:16,206,133...16,208,965 JBrowse link
G LOC101725440 chromatin modification-related protein MEAF6 located_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004624929:1,439,349...1,440,290 JBrowse link
G LOC110346853 inactive serine/threonine-protein kinase TEX14-like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624871:393,742...400,203 JBrowse link
G Lrwd1 leucine rich repeats and WD repeat domain containing 1 located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624740:15,174,170...15,181,341
Ensembl chrNW_004624740:15,174,259...15,181,191
JBrowse link
G Mad1l1 mitotic arrest deficient 1 like 1 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624740:27,174,450...27,523,366
Ensembl chrNW_004624740:27,174,354...27,523,492
JBrowse link
G Meaf6 MYST/Esa1 associated factor 6 located_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004624764:20,241,824...20,266,499
Ensembl chrNW_004624764:20,244,987...20,266,473
JBrowse link
G Meikin meiotic kinetochore factor located_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624733:40,161,901...40,243,260
Ensembl chrNW_004624733:40,162,071...40,243,544
JBrowse link
G Mis12 MIS12 kinetochore complex component located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004624786:9,285,475...9,289,659
Ensembl chrNW_004624786:9,285,830...9,289,454
JBrowse link
G Mtbp MDM2 binding protein located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624763:18,228,820...18,299,706
Ensembl chrNW_004624763:18,228,252...18,299,925
JBrowse link
G Mtcl1 microtubule crosslinking factor 1 located_in ISO (PMID:33587225) UniProt PMID:33587225 NCBI chrNW_004624770:17,702,793...17,788,861
Ensembl chrNW_004624770:17,703,586...17,788,192
JBrowse link
G Ncapd3 non-SMC condensin II complex subunit D3 located_in ISO (PMID:21795393) MGI PMID:21795393 NCBI chrNW_004624812:8,708,061...8,782,282
Ensembl chrNW_004624812:8,709,735...8,782,200
JBrowse link
G Ndc80 NDC80 kinetochore complex component located_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004624770:12,937,887...12,974,352
Ensembl chrNW_004624770:12,939,763...12,974,162
JBrowse link
G Nde1 nudE neurodevelopment protein 1 located_in IEA UniProt
TreeGrafter
GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624782:236,715...284,200
Ensembl chrNW_004624782:236,735...268,516
JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 located_in IEA UniProt
TreeGrafter
GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624786:10,981,963...11,039,504
Ensembl chrNW_004624786:11,000,615...11,034,689
JBrowse link
G Nek2 NIMA related kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624771:17,334,782...17,351,609
Ensembl chrNW_004624771:17,334,681...17,352,259
JBrowse link
G Nsl1 NSL1 component of MIS12 kinetochore complex located_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624771:9,932,259...9,962,854 JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex located_in IEA Ensembl
UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004624826:1,794,084...1,831,009
Ensembl chrNW_004624826:1,798,737...1,831,112
JBrowse link
G Nup107 nucleoporin 107 located_in ISO (PMID:17363900) UniProt PMID:17363900 NCBI chrNW_004624948:556,054...604,381
Ensembl chrNW_004624948:556,127...601,540
JBrowse link
G Nup133 nucleoporin 133 located_in ISO (PMID:17098863) UniProt PMID:17098863 NCBI chrNW_004624775:19,589,496...19,647,823
Ensembl chrNW_004624775:19,589,372...19,648,884
JBrowse link
G Nup160 nucleoporin 160 located_in ISO (PMID:15146057) UniProt PMID:15146057 NCBI chrNW_004624767:1,099,824...1,139,179
Ensembl chrNW_004624767:1,099,760...1,141,914
JBrowse link
G Nup37 nucleoporin 37 located_in ISO (PMID:15146057) UniProt PMID:15146057 NCBI chrNW_004624750:6,163,379...6,202,782
Ensembl chrNW_004624750:6,163,380...6,203,522
JBrowse link
G Nup43 nucleoporin 43 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624785:8,329,172...8,343,934
Ensembl chrNW_004624785:8,329,131...8,345,345
JBrowse link
G Nup85 nucleoporin 85 located_in ISO (PMID:15146057) UniProt PMID:15146057 NCBI chrNW_004624801:5,023,255...5,057,140
Ensembl chrNW_004624801:5,022,617...5,057,140
JBrowse link
G Nup98 nucleoporin 98 and 96 precursor located_in ISO (PMID:15146057) UniProt PMID:15146057 NCBI chrNW_004624817:5,125,658...5,245,453
Ensembl chrNW_004624817:5,123,977...5,245,286
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 located_in ISO (PMID:11056532), (PMID:11889140), (PMID:11940666) UniProt PMID:11056532 PMID:11889140 PMID:11940666 NCBI chrNW_004624786:5,223,890...5,306,033
Ensembl chrNW_004624786:5,224,982...5,302,436
JBrowse link
G Pbrm1 polybromo 1 located_in ISO (PMID:14519686) MGI PMID:14519686 NCBI chrNW_004624822:4,529,350...4,666,714
Ensembl chrNW_004624822:4,529,007...4,663,165
JBrowse link
G Phf2 PHD finger protein 2 located_in ISO (PMID:20813266) UniProt PMID:20813266 NCBI chrNW_004624868:2,890,730...2,992,788
Ensembl chrNW_004624868:2,890,612...2,975,988
JBrowse link
G Pinx1 PIN2 (TERF1) interacting telomerase inhibitor 1 located_in ISO (PMID:19393617) UniProt PMID:19393617 NCBI chrNW_004624758:24,589,990...24,666,355
Ensembl chrNW_004624758:24,589,743...24,666,598
JBrowse link
G Plk1 polo like kinase 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624782:8,811,593...8,823,060
Ensembl chrNW_004624782:8,811,616...8,826,749
JBrowse link
G Plk2 polo like kinase 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624759:811,320...817,401
Ensembl chrNW_004624759:811,316...817,474
JBrowse link
G Plk3 polo like kinase 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624906:678,517...693,644
Ensembl chrNW_004624906:688,707...693,326
JBrowse link
G Plk5 polo like kinase 5 (inactive) located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:7,172,286...7,181,564 JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624747:21,191,165...21,212,521
Ensembl chrNW_004624747:21,191,150...21,213,544
JBrowse link
G Ppp1r12a protein phosphatase 1 regulatory subunit 12A located_in ISO (PMID:18477460) UniProt PMID:18477460 NCBI chrNW_004624750:18,363,618...18,498,630
Ensembl chrNW_004624750:18,363,913...18,501,243
JBrowse link
G Prp4k pre-mRNA processing factor kinase PRP4K located_in ISO (PMID:17998396) UniProt PMID:17998396 NCBI chrNW_004624756:21,038,438...21,082,607 JBrowse link
G Psen1 presenilin 1 located_in ISO (PMID:9298903) UniProt PMID:9298903 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743
JBrowse link
G Psen2 presenilin 2 located_in ISO (PMID:9298903) UniProt PMID:9298903 NCBI chrNW_004624771:17,183,538...17,205,460
Ensembl chrNW_004624771:17,183,447...17,224,188
JBrowse link
G Rangap1 Ran GTPase activating protein 1 located_in ISO (PMID:17363900) UniProt PMID:17363900 NCBI chrNW_004624752:7,246,161...7,277,702
Ensembl chrNW_004624752:7,246,193...7,277,701
JBrowse link
G Rassf2 Ras association domain family member 2 located_in ISO (PMID:20813266) UniProt PMID:20813266 NCBI chrNW_004624741:5,851,260...5,894,972
Ensembl chrNW_004624741:5,857,607...5,894,969
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624820:8,361,345...8,369,356
Ensembl chrNW_004624820:8,361,400...8,368,347
JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:5,194,852...5,217,821
Ensembl chrNW_004624731:5,194,961...5,217,821
JBrowse link
G Seh1l SEH1 like nucleoporin located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004624770:19,913,601...19,938,387 JBrowse link
G Septin7 septin 7 located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624740:25,083,414...25,179,493 JBrowse link
G Sgo1 shugoshin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624821:5,497,620...5,514,661
Ensembl chrNW_004624821:5,498,386...5,511,796
JBrowse link
G Sgo2 shugoshin 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624889:540,680...563,110
Ensembl chrNW_004624889:540,008...559,035
JBrowse link
G Sin3a SIN3 transcription regulator family member A located_in ISO (PMID:14519686) MGI PMID:14519686 NCBI chrNW_004624894:300,027...388,397
Ensembl chrNW_004624894:301,082...362,683
JBrowse link
G Ska1 spindle and kinetochore associated complex subunit 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624778:13,948,567...13,968,643
Ensembl chrNW_004624778:13,953,390...13,968,683
JBrowse link
G Ska3 spindle and kinetochore associated complex subunit 3 located_in IEA UniProt
TreeGrafter
GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624776:16,412,683...16,450,784
Ensembl chrNW_004624776:16,413,048...16,445,892
JBrowse link
G Smc1a structural maintenance of chromosomes 1A located_in ISO (PMID:11682612), (PMID:12199140) BHF-UCL PMID:11682612 PMID:12199140 NCBI chrNW_004624909:617,015...668,513
Ensembl chrNW_004624909:630,062...668,512
JBrowse link
G Spag5 sperm associated antigen 5 located_in ISO (PMID:21402792), (PMID:27462074) UniProt PMID:21402792 PMID:27462074 NCBI chrNW_004624786:1,163,350...1,183,071
Ensembl chrNW_004624786:1,163,606...1,182,764
JBrowse link
G Spc24 SPC24 component of NDC80 kinetochore complex located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624828:3,028,401...3,033,601
Ensembl chrNW_004624828:3,028,795...3,033,552
JBrowse link
G Spc25 SPC25 component of NDC80 kinetochore complex located_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004624787:6,608,403...6,624,533
Ensembl chrNW_004624787:6,608,039...6,624,597
JBrowse link
G Spdl1 spindle apparatus coiled-coil protein 1 located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624733:20,326,565...20,350,937
Ensembl chrNW_004624733:20,326,893...20,350,923
JBrowse link
G Spout1 SPOUT domain containing methyltransferase 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:6,186,779...6,193,519
Ensembl chrNW_004624760:6,186,901...6,196,374
JBrowse link
G Ss18l1 SS18L1 subunit of BAF chromatin remodeling complex located_in ISO (PMID:18331714) MGI PMID:18331714 NCBI chrNW_004624741:28,017,400...28,064,617
Ensembl chrNW_004624741:28,017,400...28,049,456
JBrowse link
G Sugt1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone located_in ISO (PMID:32483152) MGI PMID:32483152 NCBI chrNW_004624748:14,094,685...14,132,304 JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 located_in ISO (PMID:11801725) MGI PMID:11801725 NCBI chrNW_004624804:10,517,531...10,612,238
Ensembl chrNW_004624804:10,517,696...10,591,688
JBrowse link
G Tpr translocated promoter region, nuclear basket protein NOT|located_in ISO (PMID:19273613)
(PMID:20133940)
UniProt PMID:19273613 PMID:20133940 NCBI chrNW_004624814:7,249,379...7,306,239
Ensembl chrNW_004624814:7,249,278...7,306,235
JBrowse link
G Trappc12 trafficking protein particle complex subunit 12 located_in ISO (PMID:25918224) UniProt PMID:25918224 NCBI chrNW_004624846:5,211,359...5,249,332
Ensembl chrNW_004624846:5,210,443...5,249,315
JBrowse link
G Ttk TTK protein kinase located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624819:6,631,697...6,682,181 JBrowse link
G Xpo1 exportin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624833:375,817...424,499
Ensembl chrNW_004624833:375,820...424,499
JBrowse link
G Znf207 zinc finger protein 207 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624875:434,770...463,977
Ensembl chrNW_004624875:434,087...453,932
JBrowse link
G Znf276 zinc finger protein 276 located_in ISO (PMID:20813266) UniProt PMID:20813266 NCBI chrNW_004624746:252,631...266,789
Ensembl chrNW_004624746:252,631...266,680
JBrowse link
G Zw10 zw10 kinetochore protein located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004624784:9,221,123...9,255,294
Ensembl chrNW_004624784:9,221,128...9,255,284
JBrowse link
G Zwilch zwilch kinetochore protein located_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004624781:6,168,482...6,209,581
Ensembl chrNW_004624781:6,171,114...6,209,380
JBrowse link
G Zwint ZW10 interacting kinetochore protein located_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624791:7,528,452...7,534,182
Ensembl chrNW_004624791:7,528,426...7,534,553
JBrowse link
Knl1/Spc105 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Knl1 kinetochore scaffold 1 part_of ISO (PMID:27881301) UniProt PMID:27881301 NCBI chrNW_004624804:7,884,580...7,952,567
Ensembl chrNW_004624804:7,889,689...7,952,384
JBrowse link
G Zwint ZW10 interacting kinetochore protein part_of ISO (PMID:27881301) UniProt PMID:27881301 NCBI chrNW_004624791:7,528,452...7,534,182
Ensembl chrNW_004624791:7,528,426...7,534,553
JBrowse link
late recombination nodule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 located_in ISO (PMID:27760146) MGI PMID:27760146 NCBI chrNW_004624788:15,110,436...15,160,462
Ensembl chrNW_004624788:15,110,658...15,160,535
JBrowse link
lateral element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase located_in ISO (PMID:10728666) UniProt PMID:10728666 NCBI chrNW_004624768:17,422,267...17,522,894
Ensembl chrNW_004624768:17,421,291...17,522,799
JBrowse link
G Brca1 BRCA1 DNA repair associated located_in ISO (PMID:9774970) MGI PMID:9774970 NCBI chrNW_004624795:1,186,043...1,238,986
Ensembl chrNW_004624795:1,188,136...1,241,964
JBrowse link
G Brca2 BRCA2 DNA repair associated located_in ISO (PMID:9774970) MGI PMID:9774970 NCBI chrNW_004624776:5,497,552...5,573,465
Ensembl chrNW_004624776:5,497,779...5,550,993
JBrowse link
G Dmc1 DNA meiotic recombinase 1 located_in ISO (PMID:30718482) MGI PMID:30718482 NCBI chrNW_004624752:9,547,327...9,585,549
Ensembl chrNW_004624752:9,548,015...9,585,958
JBrowse link
G Incenp inner centromere protein located_in ISO (PMID:19283064) MGI PMID:19283064 NCBI chrNW_004624926:405,354...422,492
Ensembl chrNW_004624926:407,362...419,566
JBrowse link
G Kash5 KASH domain containing 5 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:4,783,593...4,806,025
Ensembl chrNW_004624832:4,783,766...4,803,325
JBrowse link
G Mei4 meiotic double-stranded break formation protein 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624819:4,629,655...4,779,472
Ensembl chrNW_004624819:4,662,800...4,838,842
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 located_in ISO (PMID:21743440) MGI PMID:21743440 NCBI chrNW_004624741:2,486,612...2,542,452
Ensembl chrNW_004624741:2,485,471...2,542,500
JBrowse link
G Rad51 RAD51 recombinase located_in ISO (PMID:18694567), (PMID:21743440)
(PMID:9774970)
MGI PMID:9774970 PMID:18694567 PMID:21743440 NCBI chrNW_004624804:7,957,175...7,983,078
Ensembl chrNW_004624804:7,957,253...7,983,619
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624820:8,361,345...8,369,356
Ensembl chrNW_004624820:8,361,400...8,368,347
JBrowse link
G Rpa1 replication protein A1 located_in ISO (PMID:21743440), (PMID:22711701) MGI PMID:21743440 PMID:22711701 NCBI chrNW_004624786:4,547,889...4,604,605
Ensembl chrNW_004624786:4,547,962...4,604,290
JBrowse link
G Smc1a structural maintenance of chromosomes 1A ISO MMO:0000662 RGD PMID:10652260 RGD:1331378 NCBI chrNW_004624909:617,015...668,513
Ensembl chrNW_004624909:630,062...668,512
JBrowse link
G Smc1b structural maintenance of chromosomes 1B located_in ISO (PMID:15870106), (PMID:22711701) MGI PMID:15870106 PMID:22711701 NCBI chrNW_004624752:4,255,829...4,320,257
Ensembl chrNW_004624752:4,255,897...4,320,665
JBrowse link
G Smc3 structural maintenance of chromosomes 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:35,698,722...35,730,854
Ensembl chrNW_004624737:35,694,566...35,730,829
JBrowse link
G Stag3 STAG3 cohesin complex component located_in ISO (PMID:22711701) MGI PMID:22711701 NCBI chrNW_004624740:16,706,695...16,734,142
Ensembl chrNW_004624740:16,707,999...16,732,537
JBrowse link
G Sycp2 synaptonemal complex protein 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:26,108,446...26,208,184
Ensembl chrNW_004624741:26,122,385...26,203,154
JBrowse link
G Sycp2l synaptonemal complex protein 2 like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624756:14,999,209...15,084,967
Ensembl chrNW_004624756:14,996,868...15,084,285
JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in ISO PMID:9933407
(PMID:10678170), (PMID:18802469), (PMID:19283064), (PMID:21539824), (PMID:21743440), (PMID:22011390), (PMID:22711701), (PMID:22854038), (PMID:23133398), (PMID:23555294), (PMID:25533956), (PMID:25675407)
UniProt
MGI
PMID:9933407 PMID:10678170 PMID:18802469 PMID:19283064 PMID:21539824 More... RGD:11035335 NCBI chrNW_004624750:6,345,112...6,358,724
Ensembl chrNW_004624750:6,349,400...6,358,180
JBrowse link
MIS12/MIND type complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dsn1 DSN1 component of MIS12 kinetochore complex part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624842:2,738,739...2,762,968
Ensembl chrNW_004624842:2,738,734...2,760,783
JBrowse link
G LOC101706757 polyamine-modulated factor 1 part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624885:1,517,617...1,526,434
Ensembl chrNW_004624885:1,517,539...1,526,429
JBrowse link
G LOC101708495 kinetochore-associated protein NSL1 homolog part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624743:15,496,175...15,507,147 JBrowse link
G Mis12 MIS12 kinetochore complex component part_of IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624786:9,285,475...9,289,659
Ensembl chrNW_004624786:9,285,830...9,289,454
JBrowse link
G Nsl1 NSL1 component of MIS12 kinetochore complex part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624771:9,932,259...9,962,854 JBrowse link
Mis6-Sim4 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpo centromere protein O part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:7,147,824...7,170,287
Ensembl chrNW_004624738:7,148,294...7,162,183
JBrowse link
Ndc80 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ndc80 NDC80 kinetochore complex component part_of IEA InterPro
UniProt
TreeGrafter
GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624770:12,937,887...12,974,352
Ensembl chrNW_004624770:12,939,763...12,974,162
JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex part_of IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624826:1,794,084...1,831,009
Ensembl chrNW_004624826:1,798,737...1,831,112
JBrowse link
G Spc24 SPC24 component of NDC80 kinetochore complex part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:3,028,401...3,033,601
Ensembl chrNW_004624828:3,028,795...3,033,552
JBrowse link
G Spc25 SPC25 component of NDC80 kinetochore complex part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624787:6,608,403...6,624,533
Ensembl chrNW_004624787:6,608,039...6,624,597
JBrowse link
outer kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bod1 biorientation of chromosomes in cell division 1 part_of ISO (PMID:17938248) UniProt PMID:17938248 NCBI chrNW_004624733:16,459,383...16,469,343 JBrowse link
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase part_of ISO (PMID:22331848) UniProt PMID:22331848 NCBI chrNW_004624749:1,584,289...1,639,334
Ensembl chrNW_004624749:1,584,186...1,639,770
JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624804:7,477,046...7,533,322
Ensembl chrNW_004624804:7,492,799...7,533,408
JBrowse link
G Cenpe centromere protein E part_of ISO (PMID:19283064) MGI PMID:19283064 NCBI chrNW_004624830:4,930,533...4,986,437
Ensembl chrNW_004624830:4,930,555...4,986,076
JBrowse link
G Cenpf centromere protein F part_of ISO (PMID:7542657), (PMID:7642639), (PMID:7904902) UniProt PMID:7542657 PMID:7642639 PMID:7904902 NCBI chrNW_004624771:19,657,489...19,702,506
Ensembl chrNW_004624771:19,656,981...19,702,625
JBrowse link
G Crebbp CREB binding protein part_of ISO (PMID:14519686) MGI PMID:14519686 NCBI chrNW_004624824:1,516,481...1,655,364
Ensembl chrNW_004624824:1,517,966...1,655,329
JBrowse link
G Dsn1 DSN1 component of MIS12 kinetochore complex part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chrNW_004624842:2,738,739...2,762,968
Ensembl chrNW_004624842:2,738,734...2,760,783
JBrowse link
G Knl1 kinetochore scaffold 1 part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chrNW_004624804:7,884,580...7,952,567
Ensembl chrNW_004624804:7,889,689...7,952,384
JBrowse link
G LOC101724174 spindle and kinetochore-associated protein 2-like part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624752:16,206,133...16,208,965 JBrowse link
G Mis12 MIS12 kinetochore complex component part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:9,285,475...9,289,659
Ensembl chrNW_004624786:9,285,830...9,289,454
JBrowse link
G Ndc80 NDC80 kinetochore complex component part_of ISO (PMID:18195732), (PMID:24530301) BHF-UCL PMID:18195732 PMID:24530301 NCBI chrNW_004624770:12,937,887...12,974,352
Ensembl chrNW_004624770:12,939,763...12,974,162
JBrowse link
G Nsl1 NSL1 component of MIS12 kinetochore complex part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chrNW_004624771:9,932,259...9,962,854 JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624826:1,794,084...1,831,009
Ensembl chrNW_004624826:1,798,737...1,831,112
JBrowse link
G Plk1 polo like kinase 1 part_of ISO (PMID:18195732) BHF-UCL PMID:18195732 NCBI chrNW_004624782:8,811,593...8,823,060
Ensembl chrNW_004624782:8,811,616...8,826,749
JBrowse link
G Ska1 spindle and kinetochore associated complex subunit 1 part_of IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624778:13,948,567...13,968,643
Ensembl chrNW_004624778:13,953,390...13,968,683
JBrowse link
G Ska3 spindle and kinetochore associated complex subunit 3 part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624776:16,412,683...16,450,784
Ensembl chrNW_004624776:16,413,048...16,445,892
JBrowse link
G Spc24 SPC24 component of NDC80 kinetochore complex part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chrNW_004624828:3,028,401...3,033,601
Ensembl chrNW_004624828:3,028,795...3,033,552
JBrowse link
G Spc25 SPC25 component of NDC80 kinetochore complex part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chrNW_004624787:6,608,403...6,624,533
Ensembl chrNW_004624787:6,608,039...6,624,597
JBrowse link
G Spdl1 spindle apparatus coiled-coil protein 1 part_of IEA UniProt
TreeGrafter
GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624733:20,326,565...20,350,937
Ensembl chrNW_004624733:20,326,893...20,350,923
JBrowse link
G Zwint ZW10 interacting kinetochore protein part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chrNW_004624791:7,528,452...7,534,182
Ensembl chrNW_004624791:7,528,426...7,534,553
JBrowse link
recombination nodule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msh4 mutS homolog 4 located_in ISO (PMID:27760146) MGI PMID:27760146 NCBI chrNW_004624742:21,098,102...21,167,472
Ensembl chrNW_004624742:21,098,101...21,167,398
JBrowse link
RZZ complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kntc1 kinetochore associated 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:22,667,872...22,758,411
Ensembl chrNW_004624747:22,669,297...22,758,226
JBrowse link
G Zw10 zw10 kinetochore protein part_of IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624784:9,221,123...9,255,294
Ensembl chrNW_004624784:9,221,128...9,255,284
JBrowse link
G Zwilch zwilch kinetochore protein part_of IEA UniProt
InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624781:6,168,482...6,209,581
Ensembl chrNW_004624781:6,171,114...6,209,380
JBrowse link
SKA complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ska1 spindle and kinetochore associated complex subunit 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624778:13,948,567...13,968,643
Ensembl chrNW_004624778:13,953,390...13,968,683
JBrowse link
G Ska3 spindle and kinetochore associated complex subunit 3 part_of ISO (PMID:31804178) UniProt PMID:31804178 NCBI chrNW_004624776:16,412,683...16,450,784
Ensembl chrNW_004624776:16,413,048...16,445,892
JBrowse link
Smc5-Smc6 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eid3 EP300 interacting inhibitor of differentiation 3 part_of IEA UniProt
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624750:4,478,753...4,482,276
Ensembl chrNW_004624750:4,478,911...4,479,872
JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component part_of IEA InterPro
UniProt
TreeGrafter
GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624782:11,910,749...11,944,323
Ensembl chrNW_004624782:11,910,927...11,944,234
JBrowse link
G Nsmce2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624735:29,915,007...30,166,564
Ensembl chrNW_004624735:29,913,423...30,151,922
JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component part_of ISO (PMID:18086888), (PMID:27427983) UniProt PMID:18086888 PMID:27427983 NCBI chrNW_004624768:2,402,456...2,403,944 JBrowse link
G Nsmce4a NSE4 homolog A, SMC5-SMC6 complex component part_of IEA UniProt
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624737:24,706,292...24,724,616
Ensembl chrNW_004624737:24,706,321...24,725,351
JBrowse link
G Smc5 structural maintenance of chromosomes 5 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:2,697,764...2,803,501
Ensembl chrNW_004624736:2,700,161...2,803,439
JBrowse link
G Smc6 structural maintenance of chromosomes 6 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:612,758...689,191
Ensembl chrNW_004624738:614,402...681,430
JBrowse link
synaptonemal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnb1ip1 cyclin B1 interacting protein 1 located_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004624825:4,842,246...4,860,758
Ensembl chrNW_004624825:4,853,388...4,860,217
JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 (inactive) located_in ISO (PMID:12764197) UniProt PMID:12764197 NCBI chrNW_004624740:14,369,214...14,400,560
Ensembl chrNW_004624740:14,369,164...14,400,480
JBrowse link
G Hormad1 HORMA domain containing 1 located_in ISO (PMID:22854038) MGI PMID:22854038 NCBI chrNW_004624772:18,379,154...18,403,456
Ensembl chrNW_004624772:18,379,745...18,403,745
JBrowse link
G Hormad2 HORMA domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:6,388,679...6,493,583
Ensembl chrNW_004624747:6,388,710...6,494,967
JBrowse link
G Hspa2 heat shock protein family A (Hsp70) member 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:36,476,372...36,478,548 JBrowse link
G Incenp inner centromere protein located_in ISO (PMID:12584241) MGI PMID:12584241 NCBI chrNW_004624926:405,354...422,492
Ensembl chrNW_004624926:407,362...419,566
JBrowse link
G Lig3 DNA ligase 3 located_in ISO (PMID:9001252) MGI PMID:9001252 NCBI chrNW_004624875:2,871,944...2,907,757
Ensembl chrNW_004624875:2,872,357...2,893,967
JBrowse link
G Mlh1 mutL homolog 1 located_in ISO PMID:16968740
(PMID:15467367), (PMID:16260499)
MGI PMID:15467367 PMID:16260499 PMID:16968740 RGD:8554354 NCBI chrNW_004624788:15,110,436...15,160,462
Ensembl chrNW_004624788:15,110,658...15,160,535
JBrowse link
G Mlh3 mutL homolog 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:26,642,800...26,677,187
Ensembl chrNW_004624734:26,642,946...26,674,315
JBrowse link
G Msh4 mutS homolog 4 located_in ISO (PMID:10809667), (PMID:16260499) MGI PMID:10809667 PMID:16260499 NCBI chrNW_004624742:21,098,102...21,167,472
Ensembl chrNW_004624742:21,098,101...21,167,398
JBrowse link
G Msh5 mutS homolog 5 located_in ISO (PMID:16260499) MGI PMID:16260499 NCBI chrNW_004624754:24,453,750...24,477,574
Ensembl chrNW_004624754:24,453,902...24,473,051
JBrowse link
G P3h4 prolyl 3-hydroxylase family member 4 (inactive) ISO RGD PMID:1363622 RGD:633987 NCBI chrNW_004624795:1,943,113...1,947,365
Ensembl chrNW_004624795:1,943,300...1,947,459
JBrowse link
G Plk1 polo like kinase 1 located_in ISO (PMID:22854038) MGI PMID:22854038 NCBI chrNW_004624782:8,811,593...8,823,060
Ensembl chrNW_004624782:8,811,616...8,826,749
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624820:8,361,345...8,369,356
Ensembl chrNW_004624820:8,361,400...8,368,347
JBrowse link
G Rnf212 ring finger protein 212 located_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624755:26,081,943...26,120,967
Ensembl chrNW_004624755:26,082,378...26,120,655
JBrowse link
G Rnf212b ring finger protein 212B located_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624820:9,268,727...9,322,963 JBrowse link
G Smc1a structural maintenance of chromosomes 1A ISO MMO:0000679 RGD PMID:10652260 RGD:1331378 NCBI chrNW_004624909:617,015...668,513
Ensembl chrNW_004624909:630,062...668,512
JBrowse link
G Smc1b structural maintenance of chromosomes 1B located_in ISO (PMID:11564881), (PMID:16968740) MGI PMID:11564881 PMID:16968740 NCBI chrNW_004624752:4,255,829...4,320,257
Ensembl chrNW_004624752:4,255,897...4,320,665
JBrowse link
G Smc3 structural maintenance of chromosomes 3 ISO MMO:0000679 RGD PMID:10652260 RGD:1331378 NCBI chrNW_004624737:35,698,722...35,730,854
Ensembl chrNW_004624737:35,694,566...35,730,829
JBrowse link
G Stag3 STAG3 cohesin complex component located_in ISO (PMID:10698974) MGI PMID:10698974 NCBI chrNW_004624740:16,706,695...16,734,142
Ensembl chrNW_004624740:16,707,999...16,732,537
JBrowse link
G Syce1 synaptonemal complex central element protein 1 located_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624737:12,290,317...12,297,823
Ensembl chrNW_004624737:12,290,276...12,297,924
JBrowse link
G Syce1l synaptonemal complex central element protein 1 like located_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624746:9,660,721...9,730,316 JBrowse link
G Sycp1 synaptonemal complex protein 1 located_in ISO
IEA
RGD
InterPro
PMID:8660935 GO_REF:0000002 RGD:9686370 NCBI chrNW_004624772:10,524,656...10,699,894
Ensembl chrNW_004624772:10,525,203...10,699,560
JBrowse link
G Sycp2 synaptonemal complex protein 2 located_in ISO (PMID:18316482), (PMID:26362258) RGD
MGI
PMID:9592139 PMID:18316482 PMID:26362258 RGD:69387 NCBI chrNW_004624741:26,108,446...26,208,184
Ensembl chrNW_004624741:26,122,385...26,203,154
JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624750:6,345,112...6,358,724
Ensembl chrNW_004624750:6,349,400...6,358,180
JBrowse link
G Syn1 synapsin I located_in ISO (PMID:14736746) MGI PMID:14736746 NCBI chrNW_004624978:110,640...179,910
Ensembl chrNW_004624978:110,506...180,568
JBrowse link
G Tex12 testis expressed 12 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:7,317,642...7,324,128
Ensembl chrNW_004624784:7,317,507...7,322,619
JBrowse link
transverse filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stag3 STAG3 cohesin complex component located_in ISO (PMID:15870106) MGI PMID:15870106 NCBI chrNW_004624740:16,706,695...16,734,142
Ensembl chrNW_004624740:16,707,999...16,732,537
JBrowse link
G Sycp1 synaptonemal complex protein 1 located_in ISO
IEA
RGD
TreeGrafter
PMID:1464329 GO_REF:0000118 RGD:729937 NCBI chrNW_004624772:10,524,656...10,699,894
Ensembl chrNW_004624772:10,525,203...10,699,560
JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in ISO (PMID:15870106) MGI PMID:15870106 NCBI chrNW_004624750:6,345,112...6,358,724
Ensembl chrNW_004624750:6,349,400...6,358,180
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18616
    cellular anatomical structure 18483
      organelle 13114
        membraneless organelle 4797
          intracellular membraneless organelle 4797
            chromosome 1303
              condensed chromosome 255
                Smc5-Smc6 complex 7
                condensed chromosome, centromeric region + 158
                condensed nuclear chromosome + 76
paths to the root