Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:condensed chromosome
go back to main search page
Accession:GO:0000793 term browser browse the term
Definition:A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure.
Comment:Note that this term can be used to annotate gene products that localize to a mitotic chromosome in an organism that undergoes an 'open mitosis' in which the nuclear envelope breaks down during mitosis.
Synonyms:related_synonym: cytoplasmic mitotic chromosome;   metaphase chromosome;   mitotic chromosome


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
condensed chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP8 A-kinase anchoring protein 8 located_in ISO (PMID:12082153) MGI PMID:12082153 NCBI chr 6:13,965,014...13,987,586 JBrowse link
G AKAP8 A-kinase anchoring protein 8 located_in IEA Ensembl GO_REF:0000107 Ensembl chr 6:13,966,702...13,987,410 JBrowse link
G AURKC aurora kinase C located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:49,633,395...49,638,637 JBrowse link
G BANF1 barrier to autointegration nuclear assembly factor 1 located_in
is_active_in
ISO
IEA
(PMID:28841419) RGD
TreeGrafter
Ensembl
UniProt
PMID:10393804 PMID:28841419 GO_REF:0000107 GO_REF:0000118 RGD:10054037 NCBI chr 1:8,254,186...8,255,571
Ensembl chr 1:8,253,884...8,255,572
JBrowse link
G BANF2 BANF family member 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:46,764,028...46,800,194
Ensembl chr 2:46,789,079...46,800,132
JBrowse link
G BAZ1B bromodomain adjacent to zinc finger domain 1B located_in IEA Ensembl GO_REF:0000107 NCBI chr28:9,533,802...9,617,164
Ensembl chr28:9,534,114...9,617,190
JBrowse link
G BRCA1 BRCA1 DNA repair associated located_in ISO (PMID:12913077) MGI PMID:12913077 NCBI chr16:63,162,827...63,243,928 JBrowse link
G CDK2 cyclin dependent kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:51,905,085...51,910,209
Ensembl chr11:51,905,115...51,909,907
JBrowse link
G CHAMP1 chromosome alignment maintaining phosphoprotein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:92,104,268...92,119,018
Ensembl chr 3:92,115,535...92,117,976
JBrowse link
G CTCF CCCTC-binding factor located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:59,806,753...59,889,534
Ensembl chr 5:59,806,551...59,880,049
JBrowse link
G ESRRB estrogen related receptor beta located_in ISO (PMID:27723719) UniProt PMID:27723719 NCBI chr24:53,630,998...53,762,098 JBrowse link
G FANCD2 FA complementation group D2 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr22:46,072,797...46,141,107
Ensembl chr22:46,072,761...46,140,713
JBrowse link
G GTF2B general transcription factor IIB is_active_in ISO (PMID:24244602) MGI PMID:24244602 NCBI chr20:44,527,150...44,566,398
Ensembl chr20:44,527,599...44,566,424
JBrowse link
G H2AFY core histone macro-H2A.1 located_in IEA Ensembl GO_REF:0000107 NCBI chr23:38,113,212...38,178,227
Ensembl chr23:38,113,195...38,168,382
JBrowse link
G HMBS hydroxymethylbilane synthase located_in ISO strong staining of metaphase and anaphase chromatids RGD PMID:12917623 RGD:2301689 NCBI chr 1:110,457,799...110,466,361
Ensembl chr 1:110,457,537...110,466,095
JBrowse link
G HMGB1 high mobility group box 1 located_in ISO (PMID:12925773) UniProt PMID:12925773 NCBI chr 3:9,353,333...9,357,765 JBrowse link
G HMGB2 high mobility group box 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:119,440,089...119,442,806
Ensembl chr 7:119,440,468...119,443,578
JBrowse link
G L3MBTL1 L3MBTL histone methyl-lysine binding protein 1 located_in ISO (PMID:10445843) UniProt PMID:10445843 NCBI chr 2:20,253,598...20,299,022 JBrowse link
G LIG4 DNA ligase 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:86,576,200...86,587,097
Ensembl chr 3:86,577,304...86,580,039
JBrowse link
G LOC103238261 tubulin alpha-1A chain is_active_in
located_in
ISO
IEA
(PMID:24244602) MGI
Ensembl
PMID:24244602 GO_REF:0000107 NCBI chr11:45,419,046...45,423,574
Ensembl chr11:45,418,748...45,423,685
JBrowse link
G LOC119622651 barrier-to-autointegration factor located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118
G MKI67 marker of proliferation Ki-67 located_in
is_active_in
IEA
ISO
(PMID:27362226), (PMID:28935370), (PMID:32879492), (PMID:35513709), (PMID:39153474) Ensembl
UniProt
PMID:27362226 PMID:28935370 PMID:32879492 PMID:35513709 PMID:39153474 GO_REF:0000107 NCBI chr 9:120,697,183...120,727,039
Ensembl chr 9:120,698,834...120,726,866
JBrowse link
G MLH1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393
JBrowse link
G MLH3 mutL homolog 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr24:52,231,468...52,266,179 JBrowse link
G MSH4 mutS homolog 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:57,283,723...57,397,871
Ensembl chr20:57,284,575...57,396,797
JBrowse link
G NANOG Nanog homeobox NOT|located_in ISO (PMID:27723719) UniProt PMID:27723719 NCBI chr11:7,813,309...7,820,009 JBrowse link
G NCAPD2 non-SMC condensin I complex subunit D2 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:6,534,243...6,566,515
Ensembl chr11:6,535,282...6,566,546
JBrowse link
G NCAPD3 non-SMC condensin II complex subunit D3 located_in ISO (PMID:21795393) MGI PMID:21795393 NCBI chr 1:125,212,744...125,285,488
Ensembl chr 1:125,210,486...125,284,920
JBrowse link
G NCAPG non-SMC condensin I complex subunit G located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr27:32,380,722...32,413,659
Ensembl chr27:32,377,575...32,413,494
JBrowse link
G NCAPH2 non-SMC condensin II complex subunit H2 located_in IEA Ensembl GO_REF:0000107 NCBI chr19:32,978,771...32,995,055
Ensembl chr19:32,978,562...32,997,160
JBrowse link
G PAM peptidylglycine alpha-amidating monooxygenase located_in ISO (PMID:10601332) MGI PMID:10601332 NCBI chr23:6,316,428...6,482,959
Ensembl chr23:6,316,428...6,486,751
JBrowse link
G PES1 pescadillo ribosomal biogenesis factor 1 located_in ISO (PMID:12237316) MGI PMID:12237316 NCBI chr19:13,453,184...13,469,115
Ensembl chr19:13,453,160...13,469,012
JBrowse link
G RAD51 RAD51 recombinase located_in IEA Ensembl GO_REF:0000107 NCBI chr26:42,281,085...42,319,394
Ensembl chr26:42,279,608...42,318,169
JBrowse link
G REC8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chr24:1,157,135...1,165,927 JBrowse link
G RIF1 replication timing regulatory factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:36,845,751...36,937,040
Ensembl chr10:36,845,777...36,907,015
JBrowse link
G RPA1 replication protein A1 located_in ISO (PMID:12091911) MGI PMID:12091911 NCBI chr16:1,470,375...1,537,603
Ensembl chr16:1,470,474...1,539,246
JBrowse link
G SETMAR SET domain and mariner transposase fusion gene located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr22:40,389,390...40,403,917
Ensembl chr22:40,389,485...40,403,898
JBrowse link
G SMARCA5 SNF2 related chromatin remodeling ATPase 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:90,366,359...90,406,707
Ensembl chr 7:90,370,305...90,410,137
JBrowse link
G SMC2 structural maintenance of chromosomes 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:35,377,381...35,423,218
Ensembl chr12:35,374,947...35,423,364
JBrowse link
G SYCP3 synaptonemal complex protein 3 located_in ISO (PMID:10809667), (PMID:12091911), (PMID:12591952), (PMID:17784788), (PMID:19625504) MGI PMID:10809667 PMID:12091911 PMID:12591952 PMID:17784788 PMID:19625504 NCBI chr11:96,980,937...96,992,225 JBrowse link
G TOP2A DNA topoisomerase II alpha located_in IEA Ensembl GO_REF:0000107 NCBI chr16:65,761,391...65,792,041
Ensembl chr16:65,761,416...65,792,701
JBrowse link
G TOP3B DNA topoisomerase III beta located_in IEA Ensembl GO_REF:0000107 NCBI chr19:4,137,823...4,163,860
Ensembl chr19:4,137,862...4,166,436
JBrowse link
G XRCC4 X-ray repair cross complementing 4 NOT|located_in ISO (PMID:12589063) UniProt PMID:12589063 NCBI chr 4:77,182,569...77,468,786
Ensembl chr 4:77,182,793...77,468,775
JBrowse link
central element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUNH14orf39 chromosome unknown C14orf39 homolog located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr24:37,596,061...37,707,136
Ensembl chr24:37,626,089...37,676,361
JBrowse link
G INCENP inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:11,695,803...11,725,633
Ensembl chr 1:11,692,559...11,720,940
JBrowse link
G SDHD succinate dehydrogenase complex subunit D located_in IEA TreeGrafter GO_REF:0000118 Ensembl chr 1:103,443,752...103,517,917 JBrowse link
G SYCE1 synaptonemal complex central element protein 1 located_in ISO (PMID:15944401), (PMID:22164254) HGNC-UCL PMID:15944401 PMID:22164254 NCBI chr26:53,416,791...53,429,688
Ensembl chr26:53,418,202...53,428,756
JBrowse link
G SYCE2 synaptonemal complex central element protein 2 located_in ISO (PMID:15944401), (PMID:22164254), (PMID:22854038) MGI PMID:15944401 PMID:22164254 PMID:22854038 NCBI chr 6:11,581,915...11,599,770 JBrowse link
G SYCE2 synaptonemal complex central element protein 2 located_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 Ensembl chr 6:11,586,616...11,587,931 JBrowse link
G SYCE3 synaptonemal complex central element protein 3 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr19:33,023,956...33,038,641
Ensembl chr19:33,023,960...33,038,600
JBrowse link
G SYCP1 synaptonemal complex protein 1 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr20:18,712,236...18,827,120
Ensembl chr20:18,712,587...18,823,277
JBrowse link
G TEX11 testis expressed 11 located_in ISO (PMID:18316482) MGI PMID:18316482 NCBI chr  X:60,378,774...60,698,158 JBrowse link
G TEX11 testis expressed 11 located_in IEA TreeGrafter GO_REF:0000118 Ensembl chr  X:60,378,787...60,552,856 JBrowse link
checkpoint clamp complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HUS1 HUS1 checkpoint clamp component part_of IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr21:10,826,799...10,841,579
Ensembl chr21:10,826,846...10,841,382
JBrowse link
G RAD1 RAD1 checkpoint DNA exonuclease part_of IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 4:33,800,279...33,807,986
Ensembl chr 4:33,801,230...33,807,457
JBrowse link
G RAD9A RAD9 checkpoint clamp component A part_of IEA InterPro
TreeGrafter
Ensembl
UniProt
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:6,865,990...6,945,179
Ensembl chr 1:6,866,840...6,941,486
JBrowse link
G RAD9B RAD9 checkpoint clamp component B part_of IEA UniProt
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr11:105,738,247...105,772,539
Ensembl chr11:105,738,867...105,772,002
JBrowse link
chiasma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLH1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393
JBrowse link
G MLH3 mutL homolog 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr24:52,231,468...52,266,179 JBrowse link
condensed chromosome, centromeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATRX ATRX chromatin remodeler located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:66,449,830...66,737,220
Ensembl chr  X:66,448,449...66,737,164
JBrowse link
G AURKB aurora kinase B located_in IEA Ensembl GO_REF:0000107 NCBI chr16:7,571,255...7,583,034
Ensembl chr16:7,570,538...7,582,959
JBrowse link
G BUB1 BUB1 mitotic checkpoint serine/threonine kinase located_in ISO (PMID:18084284), (PMID:19965387) MGI PMID:18084284 PMID:19965387 NCBI chr14:13,647,342...13,698,061
Ensembl chr14:13,647,462...13,697,932
JBrowse link
G CBX3 chromobox 3 located_in ISO (PMID:11124534) UniProt PMID:11124534 NCBI chr21:32,154,707...32,166,843
Ensembl chr21:32,155,839...32,166,114
JBrowse link
G CEBPB CCAAT enhancer binding protein beta located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:13,780,538...13,782,639
Ensembl chr 2:13,781,160...13,782,194
JBrowse link
G CENPA centromere protein A located_in IEA Ensembl GO_REF:0000107 NCBI chr14:80,838,049...80,847,609
Ensembl chr14:80,839,335...80,846,608
JBrowse link
G CENPB centromere protein B located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:34,469,577...34,472,261
Ensembl chr 2:34,470,410...34,472,221
JBrowse link
G CENPC centromere protein C located_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chr 7:1,393,336...1,464,189
Ensembl chr 7:1,393,348...1,467,989
JBrowse link
G CENPE centromere protein E located_in ISO (PMID:19465021) UniProt PMID:19465021 NCBI chr 7:51,212,266...51,300,153 JBrowse link
G KMT5B lysine methyltransferase 5B located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:6,308,565...6,367,272
Ensembl chr 1:6,308,742...6,367,393
JBrowse link
G KMT5C lysine methyltransferase 5C located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:47,942,100...47,950,364
Ensembl chr 6:47,944,197...47,949,693
JBrowse link
G MEIKIN meiotic kinetochore factor located_in ISO (PMID:25533956) MGI PMID:25533956 NCBI chr23:34,648,698...34,779,680 JBrowse link
G NCAPD2 non-SMC condensin I complex subunit D2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:6,534,243...6,566,515
Ensembl chr11:6,535,282...6,566,546
JBrowse link
G NCAPD3 non-SMC condensin II complex subunit D3 located_in IEA UniProt
TreeGrafter
GO_REF:0000104 GO_REF:0000118 NCBI chr 1:125,212,744...125,285,488
Ensembl chr 1:125,210,486...125,284,920
JBrowse link
G NCAPG non-SMC condensin I complex subunit G located_in IEA Ensembl GO_REF:0000107 NCBI chr27:32,380,722...32,413,659
Ensembl chr27:32,377,575...32,413,494
JBrowse link
G PLK1 polo like kinase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:21,388,957...21,408,574
Ensembl chr 5:21,396,204...21,410,718
JBrowse link
G REC8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chr24:1,157,135...1,165,927 JBrowse link
G SGO1 shugoshin 1 located_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chr15:64,901,974...64,917,338
Ensembl chr15:64,901,668...64,917,324
JBrowse link
G SGO2 shugoshin 2 located_in ISO (PMID:18084284), (PMID:18765791), (PMID:19283064), (PMID:25533956) MGI PMID:18084284 PMID:18765791 PMID:19283064 PMID:25533956 NCBI chr10:86,019,474...86,075,905
Ensembl chr10:86,025,030...86,067,458
JBrowse link
G SS18L1 SS18L1 subunit of BAF chromatin remodeling complex located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:2,058,073...2,094,048
Ensembl chr 2:2,065,042...2,094,018
JBrowse link
G SYCP2 synaptonemal complex protein 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:4,214,713...4,283,451
Ensembl chr 2:4,226,063...4,282,751
JBrowse link
G SYCP2L synaptonemal complex protein 2 like located_in ISO (PMID:26362258) UniProt
MGI
PMID:26362258 NCBI chr17:61,166,225...61,244,576 JBrowse link
G SYCP2L synaptonemal complex protein 2 like located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 Ensembl chr17:61,210,235...61,246,276 JBrowse link
G SYCP3 synaptonemal complex protein 3 located_in ISO (PMID:22854038) MGI PMID:22854038 NCBI chr11:96,980,937...96,992,225 JBrowse link
condensed nuclear chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADD3 adducin 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:102,930,270...103,056,558
Ensembl chr 9:103,010,713...103,057,101
JBrowse link
G BRCA1 BRCA1 DNA repair associated located_in ISO (PMID:20551173), (PMID:26490168) MGI PMID:20551173 PMID:26490168 NCBI chr16:63,162,827...63,243,928 JBrowse link
G BRD4 bromodomain containing 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:13,836,332...13,883,459
Ensembl chr 6:13,836,324...13,873,877
JBrowse link
G CCNB1IP1 cyclin B1 interacting protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr29:20,829,304...20,849,465
Ensembl chr29:20,828,206...20,839,891
JBrowse link
G CDX2 caudal type homeobox 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:7,080,142...7,088,010
Ensembl chr 3:7,078,503...7,087,285
JBrowse link
G CHEK1 checkpoint kinase 1 located_in ISO (PMID:9382850) UniProt PMID:9382850 NCBI chr 1:116,768,141...116,809,557
Ensembl chr 1:116,767,944...116,801,371
JBrowse link
G CHMP1A charged multivesicular body protein 1A located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:74,990,706...75,002,074
Ensembl chr 5:74,990,410...75,001,988
JBrowse link
G DMC1 DNA meiotic recombinase 1 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr19:21,179,495...21,230,078
Ensembl chr19:21,180,194...21,228,120
JBrowse link
G DNMT3L DNA methyltransferase 3 like located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:87,991,868...88,006,399
Ensembl chr 2:87,991,936...88,005,459
JBrowse link
G H1-6 H1.6 linker histone, cluster member located_in ISO (PMID:18316482) MGI PMID:18316482 NCBI chr17:46,147,280...46,149,129
Ensembl chr17:46,148,286...46,148,909
JBrowse link
G H2AFX histone H2AX located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,466,692...110,468,776
Ensembl chr 1:110,467,775...110,468,206
JBrowse link
G HORMAD1 HORMA domain containing 1 located_in IEA Ensembl GO_REF:0000107
G IHO1 interactor of HORMAD1 1 located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr22:10,593,516...10,653,519 JBrowse link
G KIFAP3 kinesin associated protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr25:58,983,180...59,130,431
Ensembl chr25:58,983,207...59,130,074
JBrowse link
G LIG3 DNA ligase 3 located_in ISO (PMID:9001252) MGI PMID:9001252 NCBI chr16:28,487,953...28,511,945
Ensembl chr16:28,490,434...28,511,130
JBrowse link
G LOC103225123 argonaute RISC catalytic component 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:96,784,226...96,923,183
Ensembl chr20:96,801,900...96,923,148
JBrowse link
G LOC103243400 tubulin gamma-1 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr16:63,675,056...63,680,596
Ensembl chr16:63,675,253...63,680,571
JBrowse link
G LRPPRC leucine rich pentatricopeptide repeat containing located_in ISO (PMID:12762840) HGNC-UCL PMID:12762840 NCBI chr14:63,263,101...63,380,607 JBrowse link
G MLH1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393
JBrowse link
G MLH3 mutL homolog 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr24:52,231,468...52,266,179 JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease ISO sex vesicles/chromatin of XY bivalent RGD PMID:10855503 RGD:2300257 NCBI chr 1:85,615,448...85,694,247
Ensembl chr 1:85,610,819...85,694,269
JBrowse link
G MSH4 mutS homolog 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:57,283,723...57,397,871
Ensembl chr20:57,284,575...57,396,797
JBrowse link
G NCAPD2 non-SMC condensin I complex subunit D2 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chr11:6,534,243...6,566,515
Ensembl chr11:6,535,282...6,566,546
JBrowse link
G NCAPD3 non-SMC condensin II complex subunit D3 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chr 1:125,212,744...125,285,488
Ensembl chr 1:125,210,486...125,284,920
JBrowse link
G NCAPG non-SMC condensin I complex subunit G located_in IEA Ensembl GO_REF:0000107 NCBI chr27:32,380,722...32,413,659
Ensembl chr27:32,377,575...32,413,494
JBrowse link
G NCAPG2 non-SMC condensin II complex subunit G2 located_in IEA Ensembl GO_REF:0000107 NCBI chr21:126,658,802...126,731,005
Ensembl chr21:126,658,702...126,728,510
JBrowse link
G NCAPH non-SMC condensin I complex subunit H located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chr14:755,840...792,053
Ensembl chr14:755,897...792,154
JBrowse link
G NCAPH2 non-SMC condensin II complex subunit H2 located_in IEA Ensembl GO_REF:0000107 NCBI chr19:32,978,771...32,995,055
Ensembl chr19:32,978,562...32,997,160
JBrowse link
G NEK2 NIMA related kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr25:17,816,929...17,847,348
Ensembl chr25:17,829,546...17,842,463
JBrowse link
G NIFK nucleolar protein interacting with the FHA domain of MKI67 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,554,373...8,563,865
Ensembl chr10:8,554,583...8,563,817
JBrowse link
G NOL6 nucleolar protein 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:46,791,704...46,804,091
Ensembl chr12:46,791,725...46,805,338
JBrowse link
G PSMC3IP PSMC3 interacting protein located_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:63,709,351...63,715,338
Ensembl chr16:63,709,982...63,714,804
JBrowse link
G RAD21 RAD21 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:111,486,356...111,515,641
Ensembl chr 8:111,486,048...111,507,729
JBrowse link
G RAD21L1 RAD21 cohesin complex component like 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:55,299,061...55,335,200
Ensembl chr 2:55,307,711...55,333,874
JBrowse link
G RAD50 RAD50 double strand break repair protein located_in ISO
IEA
sex vesicles/chromatin of XY bivalent RGD
TreeGrafter
PMID:10855503 GO_REF:0000118 RGD:2300257 NCBI chr23:35,375,206...35,458,801
Ensembl chr23:35,375,305...35,458,622
JBrowse link
G RAD51 RAD51 recombinase located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr26:42,281,085...42,319,394
Ensembl chr26:42,279,608...42,318,169
JBrowse link
G RCC1 regulator of chromosome condensation 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:104,256,895...104,279,948
Ensembl chr20:104,257,877...104,278,458
JBrowse link
G REC8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chr24:1,157,135...1,165,927 JBrowse link
G RPA1 replication protein A1 located_in ISO (PMID:18283110), (PMID:18316482), (PMID:20551173), (PMID:22164254) MGI PMID:18283110 PMID:18316482 PMID:20551173 PMID:22164254 NCBI chr16:1,470,375...1,537,603
Ensembl chr16:1,470,474...1,539,246
JBrowse link
G RRS1 ribosome biogenesis regulator 1 homolog located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:62,297,483...62,299,194
Ensembl chr 8:62,297,608...62,298,705
JBrowse link
G RSPH1 radial spoke head component 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:86,348,365...86,371,908
Ensembl chr 2:86,348,056...86,371,858
JBrowse link
G SHOC1 shortage in chiasmata 1 located_in IEA InterPro
Ensembl
TreeGrafter
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr12:27,716,014...27,820,858
Ensembl chr12:27,720,405...27,821,674
JBrowse link
G SMC1B structural maintenance of chromosomes 1B located_in IEA Ensembl GO_REF:0000107 NCBI chr19:27,814,944...27,879,692
Ensembl chr19:27,815,442...27,879,640
JBrowse link
G SMC2 structural maintenance of chromosomes 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:35,377,381...35,423,218
Ensembl chr12:35,374,947...35,423,364
JBrowse link
G SMC4 structural maintenance of chromosomes 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:30,405,713...30,441,943
Ensembl chr15:30,403,826...30,441,935
JBrowse link
G STAG3 STAG3 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chr28:12,853,456...12,893,098
Ensembl chr28:12,853,404...12,891,638
JBrowse link
G SUN2 Sad1 and UNC84 domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr19:21,401,730...21,423,059
Ensembl chr19:21,403,341...21,419,663
JBrowse link
G SYCP1 synaptonemal complex protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:18,712,236...18,827,120
Ensembl chr20:18,712,587...18,823,277
JBrowse link
G SYCP3 synaptonemal complex protein 3 located_in ISO (PMID:18316482), (PMID:21621532), (PMID:22863743), (PMID:24589552), (PMID:24891606) MGI PMID:18316482 PMID:21621532 PMID:22863743 PMID:24589552 PMID:24891606 NCBI chr11:96,980,937...96,992,225 JBrowse link
G TEX11 testis expressed 11 located_in ISO (PMID:18316482) MGI PMID:18316482 NCBI chr  X:60,378,774...60,698,158 JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:56,679,333...56,740,773
Ensembl chr15:56,679,426...56,741,566
JBrowse link
G TTN titin located_in ISO (PMID:9548712) BHF-UCL PMID:9548712 NCBI chr10:64,074,994...64,379,055
Ensembl chr10:64,076,021...64,347,205
JBrowse link
inner kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CENPC centromere protein C part_of IEA Ensembl GO_REF:0000107 NCBI chr 7:1,393,336...1,464,189
Ensembl chr 7:1,393,348...1,467,989
JBrowse link
G CENPH centromere protein H part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chr 4:65,283,804...65,302,253 JBrowse link
G CENPH centromere protein H part_of IEA Ensembl GO_REF:0000107 Ensembl chr 4:65,290,139...65,301,711 JBrowse link
G CENPI centromere protein I part_of IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr  X:89,434,711...89,502,782
Ensembl chr  X:89,437,651...89,504,340
JBrowse link
G CENPK centromere protein K part_of IEA Ensembl GO_REF:0000107 NCBI chr 4:61,712,006...61,755,082
Ensembl chr 4:61,712,043...61,747,178
JBrowse link
G CENPL centromere protein L part_of IEA Ensembl GO_REF:0000107 NCBI chr25:55,361,946...55,394,091
Ensembl chr25:55,379,756...55,393,734
JBrowse link
G CENPM centromere protein M part_of IEA Ensembl GO_REF:0000107 NCBI chr19:24,471,420...24,481,271
Ensembl chr19:24,471,178...24,481,239
JBrowse link
G CENPN centromere protein N part_of IEA Ensembl GO_REF:0000107 NCBI chr 5:66,459,008...66,483,945
Ensembl chr 5:66,464,569...66,483,932
JBrowse link
G CENPO centromere protein O part_of IEA Ensembl GO_REF:0000107 NCBI chr14:82,857,947...82,875,904
Ensembl chr14:82,854,314...82,876,618
JBrowse link
G CENPP centromere protein P part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chr12:102,851,498...103,121,113 JBrowse link
G CENPP centromere protein P part_of IEA Ensembl GO_REF:0000107 Ensembl chr12:102,851,935...102,904,450 JBrowse link
G CENPQ centromere protein Q part_of IEA Ensembl GO_REF:0000107 NCBI chr17:22,898,962...22,922,234
Ensembl chr17:22,900,089...22,915,378
JBrowse link
G CENPS centromere protein S part_of IEA Ensembl GO_REF:0000107 NCBI chr20:121,333,554...121,343,893
Ensembl chr20:121,340,995...121,353,902
Ensembl chr20:121,340,995...121,353,902
JBrowse link
G CENPT centromere protein T part_of IEA Ensembl GO_REF:0000107 NCBI chr 5:59,604,893...59,611,140
Ensembl chr 5:59,605,149...59,614,206
JBrowse link
G CENPU centromere protein U part_of IEA Ensembl GO_REF:0000107 NCBI chr 7:130,653,805...130,697,329
Ensembl chr 7:130,653,967...130,697,233
JBrowse link
G CENPW centromere protein W part_of IEA Ensembl GO_REF:0000107 NCBI chr13:47,363,726...47,372,472
Ensembl chr13:47,363,717...47,372,164
JBrowse link
G CENPX centromere protein X part_of IEA Ensembl GO_REF:0000107 NCBI chr16:73,905,670...73,910,622
Ensembl chr16:73,905,600...73,910,322
JBrowse link
G ITGB3BP integrin subunit beta 3 binding protein part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chr20:69,564,456...69,638,157 JBrowse link
G ITGB3BP integrin subunit beta 3 binding protein part_of IEA Ensembl GO_REF:0000107 Ensembl chr20:69,564,669...69,639,004 JBrowse link
G LOC103231004 histone H3.3A part_of ISO (PMID:25645018) MGI PMID:25645018 NCBI chr25:3,696,153...3,704,886 JBrowse link
G ORC2 origin recognition complex subunit 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr10:86,567,350...86,629,693
Ensembl chr10:86,564,332...86,629,855
JBrowse link
kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCTF1 AT-hook containing transcription factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr25:83,889,934...83,978,965
Ensembl chr25:83,892,508...83,978,935
JBrowse link
G ANAPC16 anaphase promoting complex subunit 16 located_in IEA Ensembl
UniProt
TreeGrafter
GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:59,076,800...59,096,000
Ensembl chr 9:59,074,739...59,096,432
JBrowse link
G APC APC regulator of WNT signaling pathway located_in IEA Ensembl GO_REF:0000107 NCBI chr23:15,992,437...16,135,117
Ensembl chr23:16,042,287...16,137,067
JBrowse link
G AURKB aurora kinase B part_of
located_in
is_active_in
ISO
IEA
(PMID:22024163)
(PMID:26829474)
CACAO
Ensembl
UniProt
PMID:22024163 PMID:26829474 GO_REF:0000107 NCBI chr16:7,571,255...7,583,034
Ensembl chr16:7,570,538...7,582,959
JBrowse link
G BIRC5 baculoviral IAP repeat containing 5 located_in IEA UniProt GO_REF:0000043 NCBI chr16:70,226,824...70,237,000 JBrowse link
G BUB1 BUB1 mitotic checkpoint serine/threonine kinase located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr14:13,647,342...13,698,061
Ensembl chr14:13,647,462...13,697,932
JBrowse link
G BUB1B BUB1 mitotic checkpoint serine/threonine kinase B located_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 NCBI chr26:42,769,955...42,855,353
Ensembl chr26:42,792,830...42,855,306
JBrowse link
G BUB3 BUB3 mitotic checkpoint protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:115,825,796...115,837,432
Ensembl chr 9:115,825,664...115,838,428
JBrowse link
G CBX5 chromobox 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:50,350,440...50,396,595
Ensembl chr11:50,353,638...50,396,608
JBrowse link
G CDC20 cell division cycle 20 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:89,449,008...89,453,263
Ensembl chr20:89,444,165...89,453,044
JBrowse link
G CDT1 chromatin licensing and DNA replication factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:74,190,409...74,196,589
Ensembl chr 5:74,190,947...74,195,972
JBrowse link
G CENPC centromere protein C located_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 7:1,393,336...1,464,189
Ensembl chr 7:1,393,348...1,467,989
JBrowse link
G CENPE centromere protein E located_in ISO (PMID:11682612), (PMID:12925705), (PMID:25395579), (PMID:25918224), (PMID:9763420)
(PMID:12925705), (PMID:17938250), (PMID:18765791)
UniProt
MGI
PMID:9763420 PMID:11682612 PMID:12925705 PMID:17938250 PMID:18765791 More... NCBI chr 7:51,212,266...51,300,153 JBrowse link
G CENPF centromere protein F located_in
NOT|located_in
IEA
ISO
(PMID:10373470) Ensembl
MGI
PMID:10373470 GO_REF:0000107 NCBI chr25:14,914,805...14,972,811
Ensembl chr25:14,914,809...14,972,796
JBrowse link
G CENPH centromere protein H located_in ISO (PMID:20212317)
(PMID:10488063)
(PMID:11092768)
UniProt
MGI
PMID:10488063 PMID:11092768 PMID:20212317 NCBI chr 4:65,283,804...65,302,253 JBrowse link
G CENPH centromere protein H located_in IEA Ensembl
TreeGrafter
UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 Ensembl chr 4:65,290,139...65,301,711 JBrowse link
G CENPI centromere protein I located_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr  X:89,434,711...89,502,782
Ensembl chr  X:89,437,651...89,504,340
JBrowse link
G CENPO centromere protein O located_in IEA InterPro GO_REF:0000002 NCBI chr14:82,857,947...82,875,904
Ensembl chr14:82,854,314...82,876,618
JBrowse link
G CENPT centromere protein T located_in IEA UniProt
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 5:59,604,893...59,611,140
Ensembl chr 5:59,605,149...59,614,206
JBrowse link
G CENPV centromere protein V located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:15,315,939...15,326,732
Ensembl chr16:15,316,028...15,326,445
JBrowse link
G CENPW centromere protein W located_in IEA Ensembl
TreeGrafter
UniProt
GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr13:47,363,726...47,372,472
Ensembl chr13:47,363,717...47,372,164
JBrowse link
G CFDP1 craniofacial development protein 1 located_in IEA UniProt GO_REF:0000043 NCBI chr 5:60,775,840...60,919,109
Ensembl chr 5:60,773,986...60,919,110
JBrowse link
G CHAMP1 chromosome alignment maintaining phosphoprotein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:92,104,268...92,119,018
Ensembl chr 3:92,115,535...92,117,976
JBrowse link
G CHMP1A charged multivesicular body protein 1A located_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chr 5:74,990,706...75,002,074
Ensembl chr 5:74,990,410...75,001,988
JBrowse link
G CHMP1B charged multivesicular body protein 1B located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chr18:69,534,547...69,539,377 JBrowse link
G CHMP2A charged multivesicular body protein 2A located_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chr 6:50,827,200...50,830,730
Ensembl chr 6:50,827,284...50,830,702
JBrowse link
G CHMP2B charged multivesicular body protein 2B located_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chr22:89,672,043...89,701,801
Ensembl chr22:89,672,022...89,701,897
JBrowse link
G CHMP3 charged multivesicular body protein 3 located_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 NCBI chr14:20,536,490...20,654,761
Ensembl chr14:20,594,817...20,654,404
JBrowse link
G CHMP4A charged multivesicular body protein 4A located_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 NCBI chr24:1,192,581...1,196,989
Ensembl chr24:1,192,842...1,197,742
JBrowse link
G CHMP4B charged multivesicular body protein 4B located_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 NCBI chr 2:38,093,909...38,139,932
Ensembl chr 2:38,093,829...38,140,367
JBrowse link
G CHMP4C charged multivesicular body protein 4C located_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 NCBI chr 8:77,143,302...77,174,874
Ensembl chr 8:77,143,612...77,173,852
JBrowse link
G CHMP5 charged multivesicular body protein 5 located_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chr12:46,989,349...47,006,035
Ensembl chr12:46,988,340...47,006,742
JBrowse link
G CHMP6 charged multivesicular body protein 6 located_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 NCBI chr16:72,943,048...72,951,121
Ensembl chr16:72,943,122...72,950,694
JBrowse link
G CHMP7 charged multivesicular body protein 7 located_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 NCBI chr 8:21,370,334...21,390,036
Ensembl chr 8:21,373,968...21,387,698
JBrowse link
G CKAP5 cytoskeleton associated protein 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:18,504,588...18,584,635
Ensembl chr 1:18,484,372...18,586,623
JBrowse link
G CLASP1 cytoplasmic linker associated protein 1 located_in ISO
IEA
MMO:0000538 RGD
TreeGrafter
UniProt
PMID:28351621 GO_REF:0000043 GO_REF:0000118 RGD:27096077 NCBI chr10:8,639,245...8,946,935
Ensembl chr10:8,639,196...8,946,968
JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:77,969,587...78,186,843
Ensembl chr15:77,968,860...78,186,601
JBrowse link
G DCTN1 dynactin subunit 1 located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr14:32,885,483...32,916,491
Ensembl chr14:32,885,623...32,916,145
JBrowse link
G DCTN2 dynactin subunit 2 located_in ISO
IEA
RGD
Ensembl
PMID:8647893 GO_REF:0000107 RGD:1331348 NCBI chr11:53,438,878...53,456,181
Ensembl chr11:53,439,249...53,456,267
JBrowse link
G DCTN4 dynactin subunit 4 ISO RGD PMID:10607597 RGD:70710 NCBI chr23:53,321,724...53,364,507 JBrowse link
G DCTN6 dynactin subunit 6 located_in IEA UniProt GO_REF:0000043 NCBI chr 8:28,258,470...28,286,654
Ensembl chr 8:28,258,480...28,325,782
JBrowse link
G DSN1 DSN1 component of MIS12 kinetochore complex located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:57,511,171...57,525,241
Ensembl chr 2:57,511,366...57,527,088
JBrowse link
G DYNC1I1 dynein cytoplasmic 1 intermediate chain 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr21:52,950,983...53,271,113
Ensembl chr21:52,950,874...53,271,130
JBrowse link
G DYNC1LI1 dynein cytoplasmic 1 light intermediate chain 1 located_in ISO
IEA
RGD
Ensembl
PMID:21169557 GO_REF:0000107 RGD:13207422 NCBI chr15:77,025,416...77,073,958
Ensembl chr15:77,026,235...77,073,859
JBrowse link
G DYNC1LI2 dynein cytoplasmic 1 light intermediate chain 2 ISO RGD PMID:21169557 RGD:13207422 NCBI chr 5:52,416,645...52,448,754
Ensembl chr 5:52,419,479...52,448,901
JBrowse link
G DYNLL1 dynein light chain LC8-type 1 located_in ISO (PMID:20133940) UniProt PMID:20133940 NCBI chr11:115,851,020...115,855,526
Ensembl chr11:115,851,381...115,851,647
JBrowse link
G DYNLT3 dynein light chain Tctex-type 3 located_in ISO
IEA
RGD
Ensembl
UniProt
PMID:17289665 GO_REF:0000043 GO_REF:0000107 RGD:8554144
G FBXO28 F-box protein 28 located_in IEA Ensembl GO_REF:0000107 NCBI chr25:5,617,311...5,661,206
Ensembl chr25:5,621,596...5,661,183
JBrowse link
G FIRRM FIGNL1 interacting regulator of recombination and mitosis located_in IEA Ensembl GO_REF:0000107 NCBI chr25:59,199,252...59,257,760
Ensembl chr25:59,199,316...59,257,670
JBrowse link
G GPATCH11 G-patch domain containing 11 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:70,302,399...70,309,392
Ensembl chr14:70,302,511...70,314,491
JBrowse link
G GTF2B general transcription factor IIB is_active_in ISO (PMID:24244602) MGI PMID:24244602 NCBI chr20:44,527,150...44,566,398
Ensembl chr20:44,527,599...44,566,424
JBrowse link
G HJURP Holliday junction recognition protein located_in IEA Ensembl GO_REF:0000107 NCBI chr10:119,857,118...119,885,945
Ensembl chr10:119,868,303...119,885,783
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U located_in IEA Ensembl GO_REF:0000107 NCBI chr25:81,879,532...81,890,684
Ensembl chr25:81,878,111...81,890,701
JBrowse link
G HSF1 heat shock transcription factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:138,503,836...138,529,562
Ensembl chr 8:138,503,831...138,529,165
JBrowse link
G INCENP inner centromere protein located_in IEA UniProt
TreeGrafter
Ensembl
GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:11,695,803...11,725,633
Ensembl chr 1:11,692,559...11,720,940
JBrowse link
G ITGB3BP integrin subunit beta 3 binding protein located_in ISO (PMID:28795467) MGI PMID:28795467 NCBI chr20:69,564,456...69,638,157 JBrowse link
G ITGB3BP integrin subunit beta 3 binding protein located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 Ensembl chr20:69,564,669...69,639,004 JBrowse link
G KAT2B lysine acetyltransferase 2B located_in IEA Ensembl GO_REF:0000107 NCBI chr15:64,769,590...64,885,536
Ensembl chr15:64,770,185...64,886,219
JBrowse link
G KAT5 lysine acetyltransferase 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:8,528,097...8,544,512
Ensembl chr 1:8,526,788...8,544,972
JBrowse link
G KAT8 lysine acetyltransferase 8 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:27,806,082...27,820,832
Ensembl chr 5:27,805,844...27,820,748
JBrowse link
G KIF18A kinesin family member 18A located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:37,003,325...37,088,705
Ensembl chr 1:37,003,357...37,088,640
JBrowse link
G KIF2C kinesin family member 2C located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chr20:88,023,250...88,054,715
Ensembl chr20:88,023,207...88,055,176
JBrowse link
G KNL1 kinetochore scaffold 1 located_in ISO (PMID:15371340), (PMID:19893618)
(PMID:35167144)
UniProt PMID:15371340 PMID:19893618 PMID:35167144 NCBI chr26:42,342,741...42,409,466 JBrowse link
G KNL1 kinetochore scaffold 1 located_in IEA Ensembl GO_REF:0000107 Ensembl chr26:42,365,134...42,389,355 JBrowse link
G KNSTRN kinetochore localized astrin (SPAG5) binding protein located_in IEA Ensembl
InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr26:42,620,401...42,631,932
Ensembl chr26:42,621,084...42,631,822
JBrowse link
G LOC103227169 dynein light chain 1, cytoplasmic located_in IEA Ensembl GO_REF:0000107 NCBI chr21:116,951,646...116,952,307
Ensembl chr11:115,851,381...115,851,647
JBrowse link
G LOC103230021 protein MIS12 homolog located_in IEA UniProt GO_REF:0000043 NCBI chr25:5,752,289...5,753,548 JBrowse link
G LOC103238091 baculoviral IAP repeat-containing protein 5-like located_in IEA UniProt GO_REF:0000043 NCBI chr 9:31,447,962...31,449,430 JBrowse link
G LRWD1 leucine rich repeats and WD repeat domain containing 1 located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr28:10,748,367...10,756,304
Ensembl chr28:10,744,614...10,756,303
JBrowse link
G MAD1L1 mitotic arrest deficient 1 like 1 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr28:19,358,942...19,768,079
Ensembl chr28:19,359,233...19,768,078
JBrowse link
G MAD2L1 mitotic arrest deficient 2 like 1 located_in ISO (PMID:17363900), (PMID:19229290), (PMID:19468067), (PMID:20133940), (PMID:8824189)
(PMID:10964468), (PMID:17504913), (PMID:19075002), (PMID:19376971)
UniProt
MGI
PMID:8824189 PMID:10964468 PMID:17363900 PMID:17504913 PMID:19075002 More... NCBI chr 7:67,351,785...67,360,244 JBrowse link
G MEAF6 MYST/Esa1 associated factor 6 located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr20:95,359,469...95,380,547
Ensembl chr20:95,359,515...95,379,259
JBrowse link
G MEIKIN meiotic kinetochore factor located_in ISO (PMID:25533956) UniProt PMID:25533956 NCBI chr23:34,648,698...34,779,680 JBrowse link
G MIS12 MIS12 kinetochore complex component located_in IEA UniProt GO_REF:0000043 NCBI chr16:4,897,672...4,902,085 JBrowse link
G MTBP MDM2 binding protein located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 8:115,023,272...115,109,948
Ensembl chr 8:115,029,029...115,102,088
JBrowse link
G MTCL1 microtubule crosslinking factor 1 located_in ISO (PMID:33587225) UniProt PMID:33587225 NCBI chr18:67,666,982...67,792,792
Ensembl chr18:67,667,690...67,788,981
JBrowse link
G NCAPD3 non-SMC condensin II complex subunit D3 located_in ISO (PMID:21795393) MGI PMID:21795393 NCBI chr 1:125,212,744...125,285,488
Ensembl chr 1:125,210,486...125,284,920
JBrowse link
G NDC80 NDC80 kinetochore complex component located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr18:61,835,027...61,882,660
Ensembl chr18:61,835,064...61,881,627
JBrowse link
G NDE1 nudE neurodevelopment protein 1 located_in IEA Ensembl
TreeGrafter
UniProt
GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:14,670,559...14,720,025
Ensembl chr 5:14,684,215...14,722,192
JBrowse link
G NDEL1 nudE neurodevelopment protein 1 like 1 located_in IEA Ensembl
TreeGrafter
UniProt
GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr16:7,797,858...7,831,211 JBrowse link
G NEK2 NIMA related kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr25:17,816,929...17,847,348
Ensembl chr25:17,829,546...17,842,463
JBrowse link
G NSL1 NSL1 component of MIS12 kinetochore complex located_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr25:16,754,818...16,797,822
Ensembl chr25:16,754,139...16,797,823
JBrowse link
G NUF2 NUF2 component of NDC80 kinetochore complex located_in IEA InterPro
Ensembl
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr25:65,462,608...65,493,242
Ensembl chr25:65,462,603...65,493,246
JBrowse link
G NUP107 nucleoporin 107 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:64,317,489...64,375,609
Ensembl chr11:64,317,521...64,375,398
JBrowse link
G NUP133 nucleoporin 133 located_in ISO (PMID:17098863) UniProt PMID:17098863 NCBI chr25:66,710,468...66,777,672 JBrowse link
G NUP160 nucleoporin 160 located_in ISO (PMID:15146057) UniProt PMID:15146057 NCBI chr 1:17,468,783...17,540,963
Ensembl chr 1:17,469,576...17,541,117
JBrowse link
G NUP37 nucleoporin 37 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:97,319,980...97,367,237
Ensembl chr11:97,319,853...97,367,207
JBrowse link
G NUP43 nucleoporin 43 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:21,869,727...21,889,198
Ensembl chr13:21,870,539...21,888,811
JBrowse link
G NUP85 nucleoporin 85 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:46,433,821...46,463,822
Ensembl chr16:46,433,579...46,463,759
JBrowse link
G NUP98 nucleoporin 98 and 96 precursor located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:62,924,514...63,050,060
Ensembl chr 1:62,925,050...63,050,111
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:2,270,126...2,293,705
Ensembl chr16:2,270,085...2,296,825
JBrowse link
G PBRM1 polybromo 1 located_in ISO (PMID:14519686) MGI PMID:14519686 NCBI chr22:13,914,023...14,059,221
Ensembl chr22:13,913,285...14,055,254
JBrowse link
G PHF2 PHD finger protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:103,959,502...104,055,711
Ensembl chr12:104,007,498...104,055,711
JBrowse link
G PINX1 PIN2 (TERF1) interacting telomerase inhibitor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:8,259,537...8,336,586
Ensembl chr 8:8,259,692...8,336,603
JBrowse link
G PLK1 polo like kinase 1 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 5:21,388,957...21,408,574
Ensembl chr 5:21,396,204...21,410,718
JBrowse link
G PLK2 polo like kinase 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:54,629,868...54,636,134
Ensembl chr 4:54,629,194...54,636,032
JBrowse link
G PLK3 polo like kinase 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:87,989,573...87,995,396
Ensembl chr20:87,989,574...87,994,478
JBrowse link
G PLK5 polo like kinase 5 (inactive) located_in IEA TreeGrafter GO_REF:0000118 Ensembl chr 6:1,303,105...1,309,523 JBrowse link
G PMF1 polyamine modulated factor 1 located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr20:7,627,084...7,655,751
Ensembl chr20:7,627,524...7,655,724
JBrowse link
G PPP1R12A protein phosphatase 1 regulatory subunit 12A located_in IEA Ensembl GO_REF:0000107 NCBI chr11:75,300,278...75,461,498
Ensembl chr11:75,319,962...75,461,438
JBrowse link
G PRP4K pre-mRNA processing factor kinase PRP4K located_in IEA Ensembl GO_REF:0000107 NCBI chr17:68,110,544...68,153,939
Ensembl chr17:68,114,973...68,153,844
JBrowse link
G PSEN1 presenilin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr24:50,394,310...50,476,521
Ensembl chr24:50,405,590...50,472,132
JBrowse link
G PSEN2 presenilin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr25:2,862,354...2,888,735
Ensembl chr25:2,862,251...2,877,386
JBrowse link
G RANGAP1 Ran GTPase activating protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr19:23,789,839...23,829,653
Ensembl chr19:23,788,241...23,829,631
JBrowse link
G RASSF2 Ras association domain family member 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:33,240,302...33,285,647
Ensembl chr 2:33,240,257...33,281,269
JBrowse link
G REC8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chr24:1,157,135...1,165,927 JBrowse link
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component located_in IEA Ensembl GO_REF:0000107 NCBI chr22:46,336,909...46,357,435
Ensembl chr22:46,336,829...46,355,723
JBrowse link
G SEH1L SEH1 like nucleoporin located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr18:71,453,924...71,492,289
Ensembl chr18:71,453,972...71,491,808
JBrowse link
G SEPTIN7 septin 7 located_in IEA UniProt GO_REF:0000043 NCBI chr21:22,521,109...22,626,464
Ensembl chr21:22,522,127...22,626,504
JBrowse link
G SGO1 shugoshin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:64,901,974...64,917,338
Ensembl chr15:64,901,668...64,917,324
JBrowse link
G SGO2 shugoshin 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:86,019,474...86,075,905
Ensembl chr10:86,025,030...86,067,458
JBrowse link
G SIN3A SIN3 transcription regulator family member A located_in IEA Ensembl GO_REF:0000107 NCBI chr26:7,971,208...8,060,888
Ensembl chr26:7,975,484...8,058,278
JBrowse link
G SKA1 spindle and kinetochore associated complex subunit 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr18:30,562,320...30,579,966
Ensembl chr18:30,560,284...30,579,938
JBrowse link
G SKA2 spindle and kinetochore associated complex subunit 2 located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chr16:34,266,937...34,306,970
Ensembl chr16:34,267,161...34,304,686
JBrowse link
G SKA3 spindle and kinetochore associated complex subunit 3 located_in ISO (PMID:20813266)
(PMID:21633384)
UniProt
ComplexPortal
PMID:20813266 PMID:21633384 NCBI chr 3:32,645...57,771 JBrowse link
G SKA3 spindle and kinetochore associated complex subunit 3 located_in IEA UniProt
TreeGrafter
Ensembl
GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 Ensembl chr 3:43,053...58,843 JBrowse link
G SMC1A structural maintenance of chromosomes 1A located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:49,514,652...49,558,490
Ensembl chr  X:49,515,061...49,558,447
JBrowse link
G SPAG5 sperm associated antigen 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:22,347,213...22,370,531
Ensembl chr16:22,346,701...22,369,915
JBrowse link
G SPC24 SPC24 component of NDC80 kinetochore complex located_in ISO (PMID:15961401) ComplexPortal PMID:15961401
G SPC25 SPC25 component of NDC80 kinetochore complex located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr10:54,390,300...54,423,478
Ensembl chr10:54,403,157...54,423,245
JBrowse link
G SPDL1 spindle apparatus coiled-coil protein 1 located_in IEA UniProt GO_REF:0000043 NCBI chr23:71,795,470...71,816,468
Ensembl chr23:71,795,563...71,816,452
JBrowse link
G SPOUT1 SPOUT domain containing methyltransferase 1 located_in ISO (PMID:25657325) UniProt PMID:25657325 NCBI chr12:9,314,991...9,323,455 JBrowse link
G SS18L1 SS18L1 subunit of BAF chromatin remodeling complex located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:2,058,073...2,094,048
Ensembl chr 2:2,065,042...2,094,018
JBrowse link
G SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone located_in ISO (PMID:32483152) MGI PMID:32483152 NCBI chr 3:30,415,371...30,451,337
Ensembl chr 3:30,415,591...30,450,879
JBrowse link
G TEX14 testis expressed 14, intercellular bridge forming factor located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:34,709,039...34,849,855
Ensembl chr16:34,746,004...34,849,781
JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr26:39,489,925...39,595,096
Ensembl chr26:39,508,600...39,594,927
JBrowse link
G TPR translocated promoter region, nuclear basket protein NOT|located_in ISO
IEA
(PMID:19273613) UniProt
Ensembl
PMID:19273613 GO_REF:0000107 NCBI chr25:43,056,605...43,120,570
Ensembl chr25:43,056,886...43,123,474
JBrowse link
G TRAPPC12 trafficking protein particle complex subunit 12 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:104,191,735...104,315,340
Ensembl chr14:104,191,842...104,306,587
JBrowse link
G TTK TTK protein kinase located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr13:4,738,849...4,779,563
Ensembl chr13:4,738,959...4,780,627
JBrowse link
G XPO1 exportin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:45,428,279...45,487,965
Ensembl chr14:45,432,619...45,488,723
JBrowse link
G ZNF207 zinc finger protein 207 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:25,918,182...25,948,477
Ensembl chr16:25,918,165...25,941,560
JBrowse link
G ZNF276 zinc finger protein 276 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:75,057,541...75,073,328
Ensembl chr 5:75,057,253...75,073,023
JBrowse link
G ZW10 zw10 kinetochore protein located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr 1:105,108,531...105,152,921
Ensembl chr 1:105,109,040...105,152,862
JBrowse link
G ZWILCH zwilch kinetochore protein located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr26:17,000,373...17,045,980
Ensembl chr26:17,000,148...17,045,804
JBrowse link
G ZWINT ZW10 interacting kinetochore protein located_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 9:74,912,070...74,915,920
Ensembl chr 9:74,912,093...74,915,926
JBrowse link
Knl1/Spc105 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KNL1 kinetochore scaffold 1 part_of ISO (PMID:27881301) UniProt PMID:27881301 NCBI chr26:42,342,741...42,409,466 JBrowse link
G KNL1 kinetochore scaffold 1 part_of IEA Ensembl GO_REF:0000107 Ensembl chr26:42,365,134...42,389,355 JBrowse link
G ZWINT ZW10 interacting kinetochore protein part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:74,912,070...74,915,920
Ensembl chr 9:74,912,093...74,915,926
JBrowse link
late recombination nodule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLH1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393
JBrowse link
lateral element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase located_in IEA Ensembl GO_REF:0000107 NCBI chr29:9,046,485...9,152,320
Ensembl chr29:9,045,373...9,152,254
JBrowse link
G BRCA1 BRCA1 DNA repair associated located_in ISO (PMID:9774970) MGI PMID:9774970 NCBI chr16:63,162,827...63,243,928 JBrowse link
G BRCA2 BRCA2 DNA repair associated located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:11,070,086...11,155,257
Ensembl chr 3:11,071,682...11,155,213
JBrowse link
G DMC1 DNA meiotic recombinase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr19:21,179,495...21,230,078
Ensembl chr19:21,180,194...21,228,120
JBrowse link
G INCENP inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:11,695,803...11,725,633
Ensembl chr 1:11,692,559...11,720,940
JBrowse link
G KASH5 KASH domain containing 5 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 6:42,561,606...42,599,442 JBrowse link
G MEI4 meiotic double-stranded break formation protein 4 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr13:2,369,069...2,619,149
Ensembl chr13:2,405,699...2,619,081
JBrowse link
G RAD21L1 RAD21 cohesin complex component like 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:55,299,061...55,335,200
Ensembl chr 2:55,307,711...55,333,874
JBrowse link
G RAD51 RAD51 recombinase located_in IEA Ensembl GO_REF:0000107 NCBI chr26:42,281,085...42,319,394
Ensembl chr26:42,279,608...42,318,169
JBrowse link
G REC8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chr24:1,157,135...1,165,927 JBrowse link
G RPA1 replication protein A1 located_in ISO (PMID:21743440), (PMID:22711701) MGI PMID:21743440 PMID:22711701 NCBI chr16:1,470,375...1,537,603
Ensembl chr16:1,470,474...1,539,246
JBrowse link
G SMC1A structural maintenance of chromosomes 1A ISO MMO:0000662 RGD PMID:10652260 RGD:1331378 NCBI chr  X:49,514,652...49,558,490
Ensembl chr  X:49,515,061...49,558,447
JBrowse link
G SMC1B structural maintenance of chromosomes 1B located_in IEA Ensembl GO_REF:0000107 NCBI chr19:27,814,944...27,879,692
Ensembl chr19:27,815,442...27,879,640
JBrowse link
G SMC3 structural maintenance of chromosomes 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:103,506,779...103,543,836
Ensembl chr 9:103,506,689...103,545,523
JBrowse link
G STAG3 STAG3 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chr28:12,853,456...12,893,098
Ensembl chr28:12,853,404...12,891,638
JBrowse link
G SYCP2 synaptonemal complex protein 2 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 2:4,214,713...4,283,451
Ensembl chr 2:4,226,063...4,282,751
JBrowse link
G SYCP2L synaptonemal complex protein 2 like located_in ISO (PMID:26362258) MGI PMID:26362258 NCBI chr17:61,166,225...61,244,576 JBrowse link
G SYCP2L synaptonemal complex protein 2 like located_in IEA TreeGrafter GO_REF:0000118 Ensembl chr17:61,210,235...61,246,276 JBrowse link
G SYCP3 synaptonemal complex protein 3 located_in ISO PMID:9933407
(PMID:10678170), (PMID:18802469), (PMID:19283064), (PMID:21539824), (PMID:21743440), (PMID:22011390), (PMID:22711701), (PMID:22854038), (PMID:23133398), (PMID:23555294), (PMID:25533956), (PMID:25675407)
UniProt
MGI
PMID:9933407 PMID:10678170 PMID:18802469 PMID:19283064 PMID:21539824 More... RGD:11035335 NCBI chr11:96,980,937...96,992,225 JBrowse link
MIS12/MIND type complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSN1 DSN1 component of MIS12 kinetochore complex part_of IEA InterPro
Ensembl
TreeGrafter
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:57,511,171...57,525,241
Ensembl chr 2:57,511,366...57,527,088
JBrowse link
G LOC103230021 protein MIS12 homolog part_of IEA TreeGrafter GO_REF:0000118 NCBI chr25:5,752,289...5,753,548 JBrowse link
G MIS12 MIS12 kinetochore complex component part_of IEA TreeGrafter GO_REF:0000118 NCBI chr16:4,897,672...4,902,085 JBrowse link
G NSL1 NSL1 component of MIS12 kinetochore complex part_of IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr25:16,754,818...16,797,822
Ensembl chr25:16,754,139...16,797,823
JBrowse link
G PMF1 polyamine modulated factor 1 part_of IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr20:7,627,084...7,655,751
Ensembl chr20:7,627,524...7,655,724
JBrowse link
Mis6-Sim4 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CENPO centromere protein O part_of IEA TreeGrafter GO_REF:0000118 NCBI chr14:82,857,947...82,875,904
Ensembl chr14:82,854,314...82,876,618
JBrowse link
Ndc80 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NDC80 NDC80 kinetochore complex component part_of IEA InterPro
TreeGrafter
UniProt
Ensembl
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr18:61,835,027...61,882,660
Ensembl chr18:61,835,064...61,881,627
JBrowse link
G NUF2 NUF2 component of NDC80 kinetochore complex part_of IEA InterPro
Ensembl
TreeGrafter
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr25:65,462,608...65,493,242
Ensembl chr25:65,462,603...65,493,246
JBrowse link
G SPC24 SPC24 component of NDC80 kinetochore complex part_of ISO (PMID:14699129), (PMID:20819937)
(PMID:18455984)
UniProt
ComplexPortal
PMID:14699129 PMID:18455984 PMID:20819937
G SPC25 SPC25 component of NDC80 kinetochore complex part_of IEA InterPro
Ensembl
TreeGrafter
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr10:54,390,300...54,423,478
Ensembl chr10:54,403,157...54,423,245
JBrowse link
outer kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BOD1 biorientation of chromosomes in cell division 1 part_of ISO (PMID:17938248) UniProt PMID:17938248 NCBI chr23:75,761,476...75,771,205 JBrowse link
G BOD1 biorientation of chromosomes in cell division 1 part_of IEA Ensembl GO_REF:0000107 Ensembl chr23:75,760,925...75,770,919 JBrowse link
G BUB1 BUB1 mitotic checkpoint serine/threonine kinase part_of IEA Ensembl GO_REF:0000107 NCBI chr14:13,647,342...13,698,061
Ensembl chr14:13,647,462...13,697,932
JBrowse link
G BUB1B BUB1 mitotic checkpoint serine/threonine kinase B part_of IEA Ensembl GO_REF:0000107 NCBI chr26:42,769,955...42,855,353
Ensembl chr26:42,792,830...42,855,306
JBrowse link
G CCNB1 cyclin B1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 4:65,265,798...65,276,465
Ensembl chr 4:65,265,844...65,277,085
JBrowse link
G CENPE centromere protein E part_of ISO (PMID:19283064) MGI PMID:19283064 NCBI chr 7:51,212,266...51,300,153 JBrowse link
G CENPF centromere protein F part_of IEA Ensembl GO_REF:0000107 NCBI chr25:14,914,805...14,972,811
Ensembl chr25:14,914,809...14,972,796
JBrowse link
G CREBBP CREB binding protein part_of ISO (PMID:14519686) MGI PMID:14519686 NCBI chr 5:3,415,548...3,570,030
Ensembl chr 5:3,415,412...3,540,943
JBrowse link
G DSN1 DSN1 component of MIS12 kinetochore complex part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:57,511,171...57,525,241
Ensembl chr 2:57,511,366...57,527,088
JBrowse link
G KNL1 kinetochore scaffold 1 part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chr26:42,342,741...42,409,466 JBrowse link
G KNL1 kinetochore scaffold 1 part_of IEA Ensembl GO_REF:0000107 Ensembl chr26:42,365,134...42,389,355 JBrowse link
G MIS12 MIS12 kinetochore complex component part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chr16:4,897,672...4,902,085 JBrowse link
G NDC80 NDC80 kinetochore complex component part_of IEA Ensembl GO_REF:0000107 NCBI chr18:61,835,027...61,882,660
Ensembl chr18:61,835,064...61,881,627
JBrowse link
G NSL1 NSL1 component of MIS12 kinetochore complex part_of IEA Ensembl GO_REF:0000107 NCBI chr25:16,754,818...16,797,822
Ensembl chr25:16,754,139...16,797,823
JBrowse link
G NUF2 NUF2 component of NDC80 kinetochore complex part_of IEA Ensembl GO_REF:0000107 NCBI chr25:65,462,608...65,493,242
Ensembl chr25:65,462,603...65,493,246
JBrowse link
G PLK1 polo like kinase 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 5:21,388,957...21,408,574
Ensembl chr 5:21,396,204...21,410,718
JBrowse link
G PMF1 polyamine modulated factor 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr20:7,627,084...7,655,751
Ensembl chr20:7,627,524...7,655,724
JBrowse link
G SKA1 spindle and kinetochore associated complex subunit 1 part_of IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr18:30,562,320...30,579,966
Ensembl chr18:30,560,284...30,579,938
JBrowse link
G SKA2 spindle and kinetochore associated complex subunit 2 part_of IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr16:34,266,937...34,306,970
Ensembl chr16:34,267,161...34,304,686
JBrowse link
G SKA3 spindle and kinetochore associated complex subunit 3 part_of ISO (PMID:19289083), (PMID:19646878), (PMID:28479321) UniProt PMID:19289083 PMID:19646878 PMID:28479321 NCBI chr 3:32,645...57,771 JBrowse link
G SKA3 spindle and kinetochore associated complex subunit 3 part_of IEA InterPro
Ensembl
TreeGrafter
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 Ensembl chr 3:43,053...58,843 JBrowse link
G SPC24 SPC24 component of NDC80 kinetochore complex part_of ISO (PMID:24530301) UniProt PMID:24530301
G SPC25 SPC25 component of NDC80 kinetochore complex part_of IEA Ensembl GO_REF:0000107 NCBI chr10:54,390,300...54,423,478
Ensembl chr10:54,403,157...54,423,245
JBrowse link
G SPDL1 spindle apparatus coiled-coil protein 1 part_of IEA UniProt
TreeGrafter
Ensembl
GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr23:71,795,470...71,816,468
Ensembl chr23:71,795,563...71,816,452
JBrowse link
G ZWINT ZW10 interacting kinetochore protein part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:74,912,070...74,915,920
Ensembl chr 9:74,912,093...74,915,926
JBrowse link
recombination nodule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MSH4 mutS homolog 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:57,283,723...57,397,871
Ensembl chr20:57,284,575...57,396,797
JBrowse link
RZZ complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KNTC1 kinetochore associated 1 part_of IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr11:117,866,814...117,966,297
Ensembl chr11:117,869,711...117,963,907
JBrowse link
G ZW10 zw10 kinetochore protein part_of IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:105,108,531...105,152,921
Ensembl chr 1:105,109,040...105,152,862
JBrowse link
G ZWILCH zwilch kinetochore protein part_of IEA Ensembl
InterPro
UniProt
TreeGrafter
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr26:17,000,373...17,045,980
Ensembl chr26:17,000,148...17,045,804
JBrowse link
SKA complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SKA1 spindle and kinetochore associated complex subunit 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr18:30,562,320...30,579,966
Ensembl chr18:30,560,284...30,579,938
JBrowse link
G SKA2 spindle and kinetochore associated complex subunit 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr16:34,266,937...34,306,970
Ensembl chr16:34,267,161...34,304,686
JBrowse link
G SKA3 spindle and kinetochore associated complex subunit 3 part_of ISO (PMID:31804178) UniProt PMID:31804178 NCBI chr 3:32,645...57,771 JBrowse link
G SKA3 spindle and kinetochore associated complex subunit 3 part_of IEA Ensembl GO_REF:0000107 Ensembl chr 3:43,053...58,843 JBrowse link
Smc5-Smc6 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EID3 EP300 interacting inhibitor of differentiation 3 part_of ISO (PMID:18086888) UniProt PMID:18086888
G NSMCE1 NSE1 homolog, SMC5-SMC6 complex component part_of IEA UniProt
TreeGrafter
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:24,930,592...24,973,994
Ensembl chr 5:24,930,347...24,974,054
JBrowse link
G NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase part_of IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:119,679,090...119,949,212
Ensembl chr 8:119,691,106...119,949,587
JBrowse link
G NSMCE3 NSE3 homolog, SMC5-SMC6 complex component part_of IEA Ensembl GO_REF:0000107 NCBI chr26:52,187,217...52,189,718
Ensembl chr26:52,187,898...52,188,812
JBrowse link
G NSMCE4A NSE4 homolog A, SMC5-SMC6 complex component part_of IEA UniProt
Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:114,697,989...114,716,072
Ensembl chr 9:114,700,224...114,715,392
JBrowse link
G SMC5 structural maintenance of chromosomes 5 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr12:81,317,689...81,426,196 JBrowse link
G SMC6 structural maintenance of chromosomes 6 part_of IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr14:89,917,621...90,005,604
Ensembl chr14:89,917,518...90,000,088
JBrowse link
synaptonemal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNB1IP1 cyclin B1 interacting protein 1 located_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr29:20,829,304...20,849,465
Ensembl chr29:20,828,206...20,839,891
JBrowse link
G FAM9A family with sequence similarity 9 member A located_in IEA TreeGrafter GO_REF:0000118 Ensembl chr  X:7,290,644...7,298,243 JBrowse link
G FAM9C family with sequence similarity 9 member C located_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:11,496,335...11,541,561
Ensembl chr  X:11,518,159...11,523,851
JBrowse link
G FKBP6 FKBP prolyl isomerase family member 6 (inactive) located_in ISO (PMID:12764197) UniProt PMID:12764197 NCBI chr28:9,688,493...9,718,633 JBrowse link
G HORMAD1 HORMA domain containing 1 located_in IEA Ensembl GO_REF:0000107
G HORMAD2 HORMA domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr19:12,965,088...13,057,576
Ensembl chr19:12,977,944...13,007,296
JBrowse link
G HSPA2 heat shock protein family A (Hsp70) member 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr24:41,747,485...41,750,266
Ensembl chr24:41,747,864...41,749,783
JBrowse link
G INCENP inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:11,695,803...11,725,633
Ensembl chr 1:11,692,559...11,720,940
JBrowse link
G LIG3 DNA ligase 3 located_in ISO (PMID:9001252) MGI PMID:9001252 NCBI chr16:28,487,953...28,511,945
Ensembl chr16:28,490,434...28,511,130
JBrowse link
G LOC103231893 synapsin-1 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:44,748,994...44,797,053
Ensembl chr  X:44,750,046...44,797,009
JBrowse link
G MLH1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393
JBrowse link
G MLH3 mutL homolog 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr24:52,231,468...52,266,179 JBrowse link
G MSH4 mutS homolog 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:57,283,723...57,397,871
Ensembl chr20:57,284,575...57,396,797
JBrowse link
G MSH5 mutS homolog 5 located_in ISO (PMID:16260499) MGI PMID:16260499 NCBI chr17:40,260,979...40,283,872
Ensembl chr17:40,261,125...40,282,511
JBrowse link
G P3H4 prolyl 3-hydroxylase family member 4 (inactive) ISO RGD PMID:1363622 RGD:633987 NCBI chr16:64,448,360...64,457,865
Ensembl chr16:64,449,057...64,457,868
JBrowse link
G PLK1 polo like kinase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:21,388,957...21,408,574
Ensembl chr 5:21,396,204...21,410,718
JBrowse link
G REC8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chr24:1,157,135...1,165,927 JBrowse link
G RNF212 ring finger protein 212 located_in ISO (PMID:23396135), (PMID:24390283) UniProt PMID:23396135 PMID:24390283 NCBI chr27:47,665,652...47,705,754 JBrowse link
G RNF212 ring finger protein 212 located_in IEA InterPro
Ensembl
TreeGrafter
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 Ensembl chr27:47,666,083...47,706,076 JBrowse link
G RNF212B ring finger protein 212B located_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr29:23,609,267...23,646,333
Ensembl chr29:23,611,965...23,644,935
JBrowse link
G SMC1A structural maintenance of chromosomes 1A ISO MMO:0000679 RGD PMID:10652260 RGD:1331378 NCBI chr  X:49,514,652...49,558,490
Ensembl chr  X:49,515,061...49,558,447
JBrowse link
G SMC1B structural maintenance of chromosomes 1B located_in IEA Ensembl GO_REF:0000107 NCBI chr19:27,814,944...27,879,692
Ensembl chr19:27,815,442...27,879,640
JBrowse link
G SMC3 structural maintenance of chromosomes 3 ISO MMO:0000679 RGD PMID:10652260 RGD:1331378 NCBI chr 9:103,506,779...103,543,836
Ensembl chr 9:103,506,689...103,545,523
JBrowse link
G STAG3 STAG3 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chr28:12,853,456...12,893,098
Ensembl chr28:12,853,404...12,891,638
JBrowse link
G SYCE1 synaptonemal complex central element protein 1 located_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr26:53,416,791...53,429,688
Ensembl chr26:53,418,202...53,428,756
JBrowse link
G SYCE1L synaptonemal complex central element protein 1 like located_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr 5:62,681,266...62,699,020
Ensembl chr 5:62,685,006...62,698,946
JBrowse link
G SYCP1 synaptonemal complex protein 1 located_in ISO
IEA
RGD
Ensembl
InterPro
PMID:8660935 GO_REF:0000002 GO_REF:0000107 RGD:9686370 NCBI chr20:18,712,236...18,827,120
Ensembl chr20:18,712,587...18,823,277
JBrowse link
G SYCP2 synaptonemal complex protein 2 located_in ISO
IEA
RGD
Ensembl
PMID:9592139 GO_REF:0000107 RGD:69387 NCBI chr 2:4,214,713...4,283,451
Ensembl chr 2:4,226,063...4,282,751
JBrowse link
G SYCP3 synaptonemal complex protein 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:96,980,937...96,992,225 JBrowse link
G TEX11 testis expressed 11 located_in ISO (PMID:18369460) UniProt PMID:18369460 NCBI chr  X:60,378,774...60,698,158 JBrowse link
transverse filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STAG3 STAG3 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chr28:12,853,456...12,893,098
Ensembl chr28:12,853,404...12,891,638
JBrowse link
G SYCP1 synaptonemal complex protein 1 located_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:1464329 GO_REF:0000107 GO_REF:0000118 RGD:729937 NCBI chr20:18,712,236...18,827,120
Ensembl chr20:18,712,587...18,823,277
JBrowse link
G SYCP3 synaptonemal complex protein 3 located_in ISO (PMID:15870106) MGI PMID:15870106 NCBI chr11:96,980,937...96,992,225 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20992
    cellular anatomical structure 20608
      organelle 15460
        membraneless organelle 5788
          intracellular membraneless organelle 5788
            chromosome 1345
              condensed chromosome 273
                Smc5-Smc6 complex 7
                condensed chromosome, centromeric region + 165
                condensed nuclear chromosome + 86
paths to the root