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ONTOLOGY REPORT - ANNOTATIONS


Term:condensed chromosome
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Accession:GO:0000793 term browser browse the term
Definition:A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure.
Comment:Note that this term can be used to annotate gene products that localize to a mitotic chromosome in an organism that undergoes an 'open mitosis' in which the nuclear envelope breaks down during mitosis.
Synonyms:related_synonym: cytoplasmic mitotic chromosome;   metaphase chromosome;   mitotic chromosome


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condensed chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8 A-kinase anchoring protein 8 located_in ISO (PMID:12082153) MGI PMID:12082153 NCBI chrNW_004955495:7,874,655...7,893,209
Ensembl chrNW_004955495:7,874,746...7,892,944
JBrowse link
G Banf1 barrier to autointegration nuclear assembly factor 1 is_active_in ISO (PMID:28841419) RGD
UniProt
PMID:10393804 PMID:28841419 RGD:10054037 NCBI chrNW_004955422:19,337,038...19,338,824
Ensembl chrNW_004955422:19,337,038...19,338,824
JBrowse link
G Baz1b bromodomain adjacent to zinc finger domain 1B located_in ISO (PMID:11980720) MGI PMID:11980720 NCBI chrNW_004955456:14,185,091...14,242,391
Ensembl chrNW_004955456:14,185,107...14,240,688
JBrowse link
G Brca1 BRCA1 DNA repair associated located_in ISO (PMID:12913077) MGI PMID:12913077 NCBI chrNW_004955451:16,819,463...16,870,780
Ensembl chrNW_004955451:16,819,023...16,855,528
JBrowse link
G Cdk2 cyclin dependent kinase 2 located_in ISO (PMID:17784788) MGI PMID:17784788 NCBI chrNW_004955458:3,555,603...3,561,063
Ensembl chrNW_004955458:3,555,603...3,562,120
JBrowse link
G Champ1 chromosome alignment maintaining phosphoprotein 1 located_in ISO (PMID:21063390) UniProt PMID:21063390 NCBI chrNW_004955404:3,228...14,695
Ensembl chrNW_004955404:4,445...6,877
JBrowse link
G Ctcf CCCTC-binding factor located_in ISO (PMID:16107875) UniProt PMID:16107875 NCBI chrNW_004955484:9,041,226...9,092,924
Ensembl chrNW_004955484:9,042,524...9,064,927
JBrowse link
G Esrrb estrogen related receptor beta located_in ISO (PMID:27723719) UniProt PMID:27723719 NCBI chrNW_004955438:365,375...534,086
Ensembl chrNW_004955438:365,137...534,666
JBrowse link
G Fancd2 FA complementation group D2 located_in ISO (PMID:12913077) MGI PMID:12913077 NCBI chrNW_004955561:1,460,080...1,538,026
Ensembl chrNW_004955561:1,464,869...1,538,045
JBrowse link
G Gtf2b general transcription factor IIB is_active_in ISO (PMID:24244602) MGI PMID:24244602 NCBI chrNW_004955423:5,420,795...5,447,148
Ensembl chrNW_004955423:5,420,584...5,447,148
JBrowse link
G Hmbs hydroxymethylbilane synthase located_in ISO strong staining of metaphase and anaphase chromatids RGD PMID:12917623 RGD:2301689 NCBI chrNW_004955412:20,192,519...20,202,635
Ensembl chrNW_004955412:20,192,522...20,202,635
JBrowse link
G Hmgb1 high mobility group box 1 located_in ISO (PMID:12925773) UniProt PMID:12925773 NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339
JBrowse link
G Hmgb2 high mobility group box 2 located_in ISO (PMID:12925773) UniProt PMID:12925773 NCBI chrNW_004955403:33,656,314...33,659,115
Ensembl chrNW_004955403:33,656,300...33,659,428
JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 located_in ISO (PMID:10445843) UniProt PMID:10445843 NCBI chrNW_004955445:13,621,007...13,645,809
Ensembl chrNW_004955445:13,621,791...13,645,799
JBrowse link
G Lig4 DNA ligase 4 located_in ISO (PMID:12589063) UniProt PMID:12589063 NCBI chrNW_004955404:3,606,077...3,615,193
Ensembl chrNW_004955404:3,606,077...3,615,193
JBrowse link
G LOC102008188 core histone macro-H2A.1 located_in ISO (PMID:12082075) MGI PMID:12082075 NCBI chrNW_004955408:30,497,531...30,550,095
Ensembl chrNW_004955408:30,497,531...30,550,118
JBrowse link
G LOC102020128 histone-lysine N-methyltransferase SETMAR located_in ISO (PMID:18790802) UniProt PMID:18790802 NCBI chrNW_004955421:9,066,906...9,080,352 JBrowse link
G Mki67 marker of proliferation Ki-67 is_active_in
located_in
ISO (PMID:27362226), (PMID:28935370), (PMID:32879492), (PMID:35513709), (PMID:39153474)
(PMID:12355204)
UniProt
MGI
PMID:12355204 PMID:27362226 PMID:28935370 PMID:32879492 PMID:35513709 More... NCBI chrNW_004955477:5,847,288...5,875,970 JBrowse link
G Mlh1 mutL homolog 1 located_in ISO (PMID:8673133)
(PMID:12091911), (PMID:12913077)
MGI PMID:8673133 PMID:12091911 PMID:12913077 NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526
JBrowse link
G Mlh3 mutL homolog 3 located_in ISO (PMID:12091911) MGI PMID:12091911 NCBI chrNW_004955523:515,409...547,257
Ensembl chrNW_004955523:518,565...546,410
JBrowse link
G Msh4 mutS homolog 4 located_in ISO (PMID:10809667) MGI PMID:10809667 NCBI chrNW_004955423:17,093,573...17,154,910
Ensembl chrNW_004955423:17,093,573...17,154,910
JBrowse link
G Nanog Nanog homeobox NOT|located_in ISO (PMID:27723719) UniProt PMID:27723719 NCBI chrNW_004955413:6,561,323...6,565,770 JBrowse link
G Ncapd2 non-SMC condensin I complex subunit D2 located_in ISO (PMID:12138188)
(PMID:12082153)
MGI PMID:12082153 PMID:12138188 NCBI chrNW_004955413:4,136,492...4,160,550
Ensembl chrNW_004955413:4,137,216...4,160,550
JBrowse link
G Ncapd3 non-SMC condensin II complex subunit D3 located_in ISO (PMID:21795393) MGI PMID:21795393 NCBI chrNW_004955412:34,967,464...35,035,103
Ensembl chrNW_004955412:34,963,854...35,035,111
JBrowse link
G Ncapg non-SMC condensin I complex subunit G located_in ISO (PMID:21795393) MGI PMID:21795393 NCBI chrNW_004955480:6,399,891...6,430,617
Ensembl chrNW_004955480:6,399,960...6,430,645
JBrowse link
G Ncaph2 non-SMC condensin II complex subunit H2 located_in ISO (PMID:21795393) MGI PMID:21795393 NCBI chrNW_004955413:33,492,348...33,503,804 JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase located_in ISO (PMID:10601332) MGI PMID:10601332 NCBI chrNW_004955418:10,953,044...11,107,668
Ensembl chrNW_004955418:10,953,696...11,107,667
JBrowse link
G Pes1 pescadillo ribosomal biogenesis factor 1 located_in ISO (PMID:12237316) MGI PMID:12237316 NCBI chrNW_004955455:4,794,189...4,808,235
Ensembl chrNW_004955455:4,792,182...4,808,258
JBrowse link
G Rad51 RAD51 recombinase located_in ISO (PMID:10809667), (PMID:12091911), (PMID:12591952), (PMID:12913077), (PMID:17291760) MGI PMID:10809667 PMID:12091911 PMID:12591952 PMID:12913077 PMID:17291760 NCBI chrNW_004955416:7,566,715...7,590,628
Ensembl chrNW_004955416:7,566,686...7,590,628
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in ISO (PMID:21795393) MGI PMID:21795393 NCBI chrNW_004955409:36,223,783...36,231,749
Ensembl chrNW_004955409:36,223,844...36,230,948
JBrowse link
G Rif1 replication timing regulatory factor 1 located_in ISO (PMID:15583028) BHF-UCL PMID:15583028 NCBI chrNW_004955440:16,977,710...17,047,809
Ensembl chrNW_004955440:16,979,042...17,041,748
JBrowse link
G Rpa1 replication protein A1 located_in ISO (PMID:12091911) MGI PMID:12091911 NCBI chrNW_004955481:1,304,035...1,361,806 JBrowse link
G Smarca5 SNF2 related chromatin remodeling ATPase 5 located_in ISO (PMID:12972596) UniProt PMID:12972596 NCBI chrNW_004955471:12,206,462...12,240,219
Ensembl chrNW_004955471:12,203,318...12,237,333
JBrowse link
G Smc2 structural maintenance of chromosomes 2 located_in ISO (PMID:12589063)
(PMID:21795393)
UniProt
MGI
PMID:12589063 PMID:21795393 NCBI chrNW_004955419:22,245,843...22,294,508
Ensembl chrNW_004955419:22,245,843...22,294,508
JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in ISO (PMID:10809667), (PMID:12091911), (PMID:12591952), (PMID:17784788), (PMID:19625504) MGI PMID:10809667 PMID:12091911 PMID:12591952 PMID:17784788 PMID:19625504 NCBI chrNW_004955405:37,093,330...37,102,789
Ensembl chrNW_004955405:37,093,652...37,102,856
JBrowse link
G Top2a DNA topoisomerase II alpha located_in ISO (PMID:11835579)
(PMID:21795393)
MGI PMID:11835579 PMID:21795393 NCBI chrNW_004955451:14,928,273...14,964,855
Ensembl chrNW_004955451:14,929,136...14,964,723
JBrowse link
G Top3b DNA topoisomerase III beta located_in ISO (PMID:12591952) MGI PMID:12591952 NCBI chrNW_004955442:17,201,079...17,223,824
Ensembl chrNW_004955442:17,200,453...17,225,335
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 NOT|located_in ISO (PMID:12589063) UniProt PMID:12589063 NCBI chrNW_004955418:27,174,510...27,426,245
Ensembl chrNW_004955418:27,173,659...27,426,264
JBrowse link
central element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUNH14orf39 chromosome unknown C14orf39 homolog located_in ISO (PMID:27796301) UniProt PMID:27796301 NCBI chrNW_004955466:9,158,022...9,194,088
Ensembl chrNW_004955466:9,157,944...9,195,226
JBrowse link
G Incenp inner centromere protein located_in ISO (PMID:12584241) MGI PMID:12584241 NCBI chrNW_004955511:5,705,948...5,724,167
Ensembl chrNW_004955511:5,706,201...5,720,772
JBrowse link
G Syce1 synaptonemal complex central element protein 1 located_in ISO (PMID:15944401), (PMID:22164254) HGNC-UCL PMID:15944401 PMID:22164254 NCBI chrNW_004955507:6,263,070...6,271,289
Ensembl chrNW_004955507:6,264,059...6,271,729
JBrowse link
G Syce2 synaptonemal complex central element protein 2 located_in ISO (PMID:15944401), (PMID:22164254), (PMID:22854038) MGI PMID:15944401 PMID:22164254 PMID:22854038 NCBI chrNW_004955415:31,957,244...31,969,922
Ensembl chrNW_004955415:31,957,489...31,969,859
JBrowse link
G Syce3 synaptonemal complex central element protein 3 located_in ISO (PMID:21637789), (PMID:22164254) UniProt PMID:21637789 PMID:22164254 NCBI chrNW_004955413:33,537,646...33,573,787
Ensembl chrNW_004955413:33,537,753...33,563,373
JBrowse link
G Sycp1 synaptonemal complex protein 1 located_in ISO (PMID:12584241), (PMID:23133398) MGI PMID:12584241 PMID:23133398 NCBI chrNW_004955435:18,157,173...18,291,732 JBrowse link
G Tex11 testis expressed 11 located_in ISO (PMID:18316482) MGI PMID:18316482 NCBI chrNW_004955475:10,057,708...10,432,087 JBrowse link
G Tex12 testis expressed 12 located_in ISO (PMID:16968740), (PMID:22164254), (PMID:22854038) MGI PMID:16968740 PMID:22164254 PMID:22854038 NCBI chrNW_004955412:13,829,637...13,834,481
Ensembl chrNW_004955412:13,831,353...13,834,481
JBrowse link
checkpoint clamp complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hus1 HUS1 checkpoint clamp component part_of ISO (PMID:31776186), (PMID:36841485) UniProt PMID:31776186 PMID:36841485 NCBI chrNW_004955456:5,465,180...5,476,380
Ensembl chrNW_004955456:5,465,182...5,474,303
JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease part_of ISO (PMID:31776186), (PMID:36841485) UniProt PMID:31776186 PMID:36841485 NCBI chrNW_004955426:20,035,605...20,042,340
Ensembl chrNW_004955426:20,035,605...20,041,974
JBrowse link
G Rad9a RAD9 checkpoint clamp component A part_of ISO (PMID:31776186), (PMID:36841485) UniProt PMID:31776186 PMID:36841485 NCBI chrNW_004955422:18,079,634...18,146,122
Ensembl chrNW_004955422:18,079,652...18,085,548
JBrowse link
chiasma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 located_in ISO (PMID:17291760), (PMID:17696610), (PMID:21743440), (PMID:28031483), (PMID:30718482), (PMID:31839538) MGI PMID:17291760 PMID:17696610 PMID:21743440 PMID:28031483 PMID:30718482 More... NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526
JBrowse link
G Mlh3 mutL homolog 3 located_in ISO (PMID:12091911), (PMID:17696610) MGI PMID:12091911 PMID:17696610 NCBI chrNW_004955523:515,409...547,257
Ensembl chrNW_004955523:518,565...546,410
JBrowse link
condensed chromosome, centromeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX chromatin remodeler located_in ISO (PMID:15242786) MGI PMID:15242786 NCBI chrNW_004955557:947,368...1,252,701
Ensembl chrNW_004955557:947,167...1,252,724
JBrowse link
G Aurkb aurora kinase B located_in ISO (PMID:18195732), (PMID:19465021)
(PMID:14751927)
BHF-UCL
MGI
PMID:14751927 PMID:18195732 PMID:19465021 NCBI chrNW_004955467:8,715,387...8,720,889
Ensembl chrNW_004955467:8,715,136...8,723,932
JBrowse link
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase located_in ISO (PMID:18084284), (PMID:19965387) MGI PMID:18084284 PMID:19965387 NCBI chrNW_004955470:3,152,798...3,190,185
Ensembl chrNW_004955470:3,152,758...3,191,888
JBrowse link
G Cbx3 chromobox 3 located_in ISO (PMID:11124534) UniProt PMID:11124534 NCBI chrNW_004955410:28,042,627...28,052,616
Ensembl chrNW_004955410:28,043,110...28,052,616
JBrowse link
G Cebpb CCAAT enhancer binding protein beta located_in ISO (PMID:21122806) MGI PMID:21122806 NCBI chrNW_004955445:8,060,432...8,061,289 JBrowse link
G Cenpa centromere protein A located_in ISO (PMID:11682612)
(PMID:15242786)
BHF-UCL
MGI
PMID:11682612 PMID:15242786 NCBI chrNW_004955469:8,799,312...8,819,637
Ensembl chrNW_004955469:8,799,071...8,819,876
JBrowse link
G Cenpb centromere protein B located_in ISO (PMID:15242786) MGI PMID:15242786 NCBI chrNW_004955415:14,626,154...14,628,749
Ensembl chrNW_004955415:14,626,949...14,628,748
JBrowse link
G Cenpc centromere protein C located_in ISO (PMID:11682612)
(PMID:15242786)
BHF-UCL
MGI
PMID:11682612 PMID:15242786 NCBI chrNW_004955447:5,345,617...5,406,889
Ensembl chrNW_004955447:5,345,896...5,406,730
JBrowse link
G Cenpe centromere protein E located_in ISO (PMID:19465021) UniProt PMID:19465021 NCBI chrNW_004955496:5,468,759...5,514,915
Ensembl chrNW_004955496:5,469,239...5,513,574
JBrowse link
G Kmt5b lysine methyltransferase 5B located_in ISO (PMID:15145825) MGI PMID:15145825 NCBI chrNW_004955422:17,626,606...17,684,890
Ensembl chrNW_004955422:17,647,530...17,682,132
JBrowse link
G Kmt5c lysine methyltransferase 5C located_in ISO (PMID:15145825) MGI PMID:15145825 NCBI chrNW_004955567:895,334...901,240
Ensembl chrNW_004955567:894,608...900,578
JBrowse link
G Meikin meiotic kinetochore factor located_in ISO (PMID:25533956) MGI PMID:25533956 NCBI chrNW_004955408:3,245,147...3,331,795
Ensembl chrNW_004955408:3,244,704...3,331,985
JBrowse link
G Ncapg non-SMC condensin I complex subunit G located_in ISO (PMID:21795393) MGI PMID:21795393 NCBI chrNW_004955480:6,399,891...6,430,617
Ensembl chrNW_004955480:6,399,960...6,430,645
JBrowse link
G Plk1 polo like kinase 1 located_in ISO (PMID:22854038) MGI PMID:22854038 NCBI chrNW_004955493:2,206,353...2,217,231
Ensembl chrNW_004955493:2,206,353...2,217,231
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in ISO (PMID:18084284), (PMID:21743440) MGI PMID:18084284 PMID:21743440 NCBI chrNW_004955409:36,223,783...36,231,749
Ensembl chrNW_004955409:36,223,844...36,230,948
JBrowse link
G Sgo1 shugoshin 1 located_in ISO (PMID:19465021)
(PMID:18084284)
UniProt
MGI
PMID:18084284 PMID:19465021 NCBI chrNW_004955430:12,200,601...12,216,845
Ensembl chrNW_004955430:12,198,397...12,213,201
JBrowse link
G Sgo2 shugoshin 2 located_in ISO (PMID:18084284), (PMID:18765791), (PMID:19283064), (PMID:25533956) MGI PMID:18084284 PMID:18765791 PMID:19283064 PMID:25533956 NCBI chrNW_004955403:879,354...905,605 JBrowse link
G Ss18l1 SS18L1 subunit of BAF chromatin remodeling complex located_in ISO (PMID:18283110), (PMID:18316482), (PMID:22164254), (PMID:24891606) MGI PMID:18283110 PMID:18316482 PMID:22164254 PMID:24891606 NCBI chrNW_004955528:1,849,457...1,881,138
Ensembl chrNW_004955528:1,849,462...1,870,872
JBrowse link
G Sycp2l synaptonemal complex protein 2 like located_in ISO (PMID:26362258) UniProt
MGI
PMID:26362258 NCBI chrNW_004955465:3,440,106...3,518,840 JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in ISO (PMID:22854038) MGI PMID:22854038 NCBI chrNW_004955405:37,093,330...37,102,789
Ensembl chrNW_004955405:37,093,652...37,102,856
JBrowse link
condensed nuclear chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Add3 adducin 3 located_in ISO (PMID:1864459) MGI PMID:1864459 NCBI chrNW_004955485:1,216,435...1,273,275
Ensembl chrNW_004955485:1,216,435...1,353,953
JBrowse link
G Ago3 argonaute RISC catalytic component 3 located_in ISO (PMID:22863743) MGI PMID:22863743 NCBI chrNW_004955452:13,977,487...14,108,729
Ensembl chrNW_004955452:13,977,481...14,094,259
JBrowse link
G Brca1 BRCA1 DNA repair associated located_in ISO (PMID:20551173), (PMID:26490168) MGI PMID:20551173 PMID:26490168 NCBI chrNW_004955451:16,819,463...16,870,780
Ensembl chrNW_004955451:16,819,023...16,855,528
JBrowse link
G Brd4 bromodomain containing 4 located_in ISO (PMID:10938129), (PMID:16339075), (PMID:18039861) MGI PMID:10938129 PMID:16339075 PMID:18039861 NCBI chrNW_004955495:7,959,033...7,989,216
Ensembl chrNW_004955495:7,957,510...7,988,498
JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 located_in ISO (PMID:24891606) MGI PMID:24891606 NCBI chrNW_004955550:1,108,764...1,138,862
Ensembl chrNW_004955550:1,108,449...1,138,862
JBrowse link
G Cdx2 caudal type homeobox 2 located_in ISO (PMID:15509711) MGI PMID:15509711 NCBI chrNW_004955497:7,316,372...7,321,627 JBrowse link
G Chek1 checkpoint kinase 1 located_in ISO (PMID:9382850) UniProt PMID:9382850 NCBI chrNW_004955412:26,627,606...26,650,554 JBrowse link
G Chmp1a charged multivesicular body protein 1A located_in ISO (PMID:11559747) UniProt PMID:11559747 NCBI chrNW_004955541:3,216,972...3,223,636
Ensembl chrNW_004955541:3,216,972...3,223,634
JBrowse link
G Dmc1 DNA meiotic recombinase 1 located_in ISO (PMID:18283110), (PMID:18316482), (PMID:20551173), (PMID:22164254), (PMID:22530760), (PMID:22711701), (PMID:27760146) MGI PMID:18283110 PMID:18316482 PMID:20551173 PMID:22164254 PMID:22530760 More... NCBI chrNW_004955413:24,685,311...24,724,269
Ensembl chrNW_004955413:24,684,073...24,724,344
JBrowse link
G Dnmt3l DNA methyltransferase 3 like located_in ISO (PMID:16543361) MGI PMID:16543361 NCBI chrNW_004955407:41,177,582...41,186,965
Ensembl chrNW_004955407:41,177,582...41,186,965
JBrowse link
G Hormad1 HORMA domain containing 1 located_in ISO (PMID:22164254), (PMID:22530760) MGI PMID:22164254 PMID:22530760 NCBI chrNW_004955413:130,214...155,381
Ensembl chrNW_004955413:132,711...152,720
JBrowse link
G Iho1 interactor of HORMAD1 1 located_in ISO (PMID:27723721) UniProt PMID:27723721 NCBI chrNW_004955532:1,198,316...1,226,875 JBrowse link
G Lig3 DNA ligase 3 located_in ISO (PMID:9001252) MGI PMID:9001252 NCBI chrNW_004955481:9,696,050...9,716,154
Ensembl chrNW_004955481:9,696,054...9,715,637
JBrowse link
G LOC102025775 histone H2AX located_in ISO (PMID:20551173), (PMID:22164254), (PMID:22711701), (PMID:23555294), (PMID:26490168) MGI PMID:20551173 PMID:22164254 PMID:22711701 PMID:23555294 PMID:26490168 NCBI chrNW_004955412:20,203,173...20,204,714
Ensembl chrNW_004955412:20,203,772...20,204,203
JBrowse link
G Lrpprc leucine rich pentatricopeptide repeat containing located_in ISO (PMID:12762840) HGNC-UCL PMID:12762840 NCBI chrNW_004955441:11,012,910...11,116,965 JBrowse link
G Mlh1 mutL homolog 1 located_in ISO (PMID:18316482), (PMID:23555294), (PMID:24891606) MGI PMID:18316482 PMID:23555294 PMID:24891606 NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526
JBrowse link
G Mlh3 mutL homolog 3 located_in ISO (PMID:24891606) MGI PMID:24891606 NCBI chrNW_004955523:515,409...547,257
Ensembl chrNW_004955523:518,565...546,410
JBrowse link
G Msh4 mutS homolog 4 located_in ISO (PMID:18316482), (PMID:22164254), (PMID:23555294) MGI PMID:18316482 PMID:22164254 PMID:23555294 NCBI chrNW_004955423:17,093,573...17,154,910
Ensembl chrNW_004955423:17,093,573...17,154,910
JBrowse link
G Ncapd2 non-SMC condensin I complex subunit D2 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chrNW_004955413:4,136,492...4,160,550
Ensembl chrNW_004955413:4,137,216...4,160,550
JBrowse link
G Ncapd3 non-SMC condensin II complex subunit D3 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chrNW_004955412:34,967,464...35,035,103
Ensembl chrNW_004955412:34,963,854...35,035,111
JBrowse link
G Ncapg2 non-SMC condensin II complex subunit G2 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chrNW_004955579:896,507...955,515
Ensembl chrNW_004955579:895,249...955,517
JBrowse link
G Ncaph non-SMC condensin I complex subunit H located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chrNW_004955470:3,878,896...3,909,087
Ensembl chrNW_004955470:3,878,883...3,909,146
JBrowse link
G Ncaph2 non-SMC condensin II complex subunit H2 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chrNW_004955413:33,492,348...33,503,804 JBrowse link
G Nek2 NIMA related kinase 2 located_in ISO (PMID:15479717) MGI PMID:15479717 NCBI chrNW_004955406:5,553,661...5,563,648
Ensembl chrNW_004955406:5,553,819...5,566,361
JBrowse link
G Nifk nucleolar protein interacting with the FHA domain of MKI67 located_in ISO (PMID:11342549) UniProt PMID:11342549 NCBI chrNW_004955459:8,315,893...8,325,141
Ensembl chrNW_004955459:8,315,967...8,324,765
JBrowse link
G Nol6 nucleolar protein 6 located_in ISO (PMID:11895476) UniProt PMID:11895476 NCBI chrNW_004955472:2,210,490...2,225,275
Ensembl chrNW_004955472:2,211,079...2,224,259
JBrowse link
G Rad21 RAD21 cohesin complex component located_in ISO (PMID:24797475) MGI PMID:24797475 NCBI chrNW_004955417:22,941,549...22,966,395
Ensembl chrNW_004955417:22,941,479...22,966,837
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 located_in ISO (PMID:24797475) MGI PMID:24797475 NCBI chrNW_004955596:455,932...485,853
Ensembl chrNW_004955596:457,835...486,046
JBrowse link
G Rad50 RAD50 double strand break repair protein ISO sex vesicles/chromatin of XY bivalent RGD PMID:10855503 RGD:2300257 NCBI chrNW_004955408:3,953,801...4,035,494
Ensembl chrNW_004955408:3,953,800...4,035,494
JBrowse link
G Rad51 RAD51 recombinase located_in ISO (PMID:14668445), (PMID:18283110), (PMID:20551173), (PMID:22164254), (PMID:22530760), (PMID:23555294), (PMID:24891606), (PMID:26490168), (PMID:27760146) MGI PMID:14668445 PMID:18283110 PMID:20551173 PMID:22164254 PMID:22530760 More... NCBI chrNW_004955416:7,566,715...7,590,628
Ensembl chrNW_004955416:7,566,686...7,590,628
JBrowse link
G Rcc1 regulator of chromosome condensation 1 located_in ISO (PMID:15014043) UniProt PMID:15014043 NCBI chrNW_004955452:7,612,784...7,643,275
Ensembl chrNW_004955452:7,612,784...7,643,275
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in ISO (PMID:18084284), (PMID:22164254), (PMID:24797475) MGI PMID:18084284 PMID:22164254 PMID:24797475 NCBI chrNW_004955409:36,223,783...36,231,749
Ensembl chrNW_004955409:36,223,844...36,230,948
JBrowse link
G Rpa1 replication protein A1 located_in ISO (PMID:18283110), (PMID:18316482), (PMID:20551173), (PMID:22164254) MGI PMID:18283110 PMID:18316482 PMID:20551173 PMID:22164254 NCBI chrNW_004955481:1,304,035...1,361,806 JBrowse link
G Rrs1 ribosome biogenesis regulator 1 homolog located_in ISO (PMID:19465021) UniProt PMID:19465021 NCBI chrNW_004955444:12,740,172...12,751,674 JBrowse link
G Rsph1 radial spoke head component 1 located_in ISO (PMID:9578619) MGI PMID:9578619 NCBI chrNW_004955407:39,266,888...39,284,972
Ensembl chrNW_004955407:39,266,888...39,284,972
JBrowse link
G Shoc1 shortage in chiasmata 1 located_in ISO (PMID:29742103) UniProt PMID:29742103 NCBI chrNW_004955419:15,563,949...15,644,502
Ensembl chrNW_004955419:15,566,339...15,646,184
JBrowse link
G Smc1b structural maintenance of chromosomes 1B located_in ISO (PMID:22164254) MGI PMID:22164254 NCBI chrNW_004955413:29,709,473...29,765,043
Ensembl chrNW_004955413:29,709,473...29,765,043
JBrowse link
G Smc2 structural maintenance of chromosomes 2 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chrNW_004955419:22,245,843...22,294,508
Ensembl chrNW_004955419:22,245,843...22,294,508
JBrowse link
G Smc4 structural maintenance of chromosomes 4 located_in ISO (PMID:25474630) ComplexPortal PMID:25474630 NCBI chrNW_004955448:10,926,653...10,960,624
Ensembl chrNW_004955448:10,927,877...10,960,624
JBrowse link
G Stag3 STAG3 cohesin complex component located_in ISO (PMID:22164254), (PMID:24797475) MGI PMID:22164254 PMID:24797475 NCBI chrNW_004955573:602,635...631,775
Ensembl chrNW_004955573:602,016...630,936
JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 located_in ISO (PMID:17452644) MGI PMID:17452644 NCBI chrNW_004955413:24,851,626...24,868,352
Ensembl chrNW_004955413:24,851,626...24,865,575
JBrowse link
G Sycp1 synaptonemal complex protein 1 located_in ISO (PMID:22854038), (PMID:22863743), (PMID:24589552), (PMID:24891606) MGI PMID:22854038 PMID:22863743 PMID:24589552 PMID:24891606 NCBI chrNW_004955435:18,157,173...18,291,732 JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in ISO (PMID:18316482), (PMID:21621532), (PMID:22863743), (PMID:24589552), (PMID:24891606) MGI PMID:18316482 PMID:21621532 PMID:22863743 PMID:24589552 PMID:24891606 NCBI chrNW_004955405:37,093,330...37,102,789
Ensembl chrNW_004955405:37,093,652...37,102,856
JBrowse link
G Tex11 testis expressed 11 located_in ISO (PMID:18316482) MGI PMID:18316482 NCBI chrNW_004955475:10,057,708...10,432,087 JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 located_in ISO (PMID:14718568) MGI PMID:14718568 NCBI chrNW_004955501:4,907,687...4,974,995
Ensembl chrNW_004955501:4,908,137...4,976,453
JBrowse link
G Ttn titin located_in ISO (PMID:9548712) BHF-UCL PMID:9548712 NCBI chrNW_004955403:18,057,344...18,328,389 JBrowse link
inner kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpc centromere protein C part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004955447:5,345,617...5,406,889
Ensembl chrNW_004955447:5,345,896...5,406,730
JBrowse link
G Cenph centromere protein H part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004955446:131,703...135,873 JBrowse link
G Cenpi centromere protein I part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004955503:7,237,080...7,341,702 JBrowse link
G Cenpk centromere protein K part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004955446:3,531,702...3,583,914
Ensembl chrNW_004955446:3,531,702...3,583,914
JBrowse link
G Cenpl centromere protein L part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004955406:13,949,697...13,963,827
Ensembl chrNW_004955406:13,949,697...13,963,827
JBrowse link
G Cenpm centromere protein M part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004955413:27,349,283...27,360,052
Ensembl chrNW_004955413:27,349,283...27,360,052
JBrowse link
G Cenpn centromere protein N part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004955522:3,801,856...3,818,675
Ensembl chrNW_004955522:3,804,578...3,818,885
JBrowse link
G Cenpo centromere protein O part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004955469:6,913,438...6,933,254
Ensembl chrNW_004955469:6,913,799...6,932,206
JBrowse link
G Cenpp centromere protein P part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004955515:5,220,257...5,448,347
Ensembl chrNW_004955515:5,220,461...5,447,983
JBrowse link
G Cenpq centromere protein Q part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004955410:33,463,041...33,480,573
Ensembl chrNW_004955410:33,464,976...33,476,609
JBrowse link
G Cenps centromere protein S part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004955486:3,157,535...3,167,424
Ensembl chrNW_004955486:3,157,535...3,167,397
JBrowse link
G Cenpt centromere protein T part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004955484:8,862,221...8,867,881
Ensembl chrNW_004955484:8,862,206...8,867,771
JBrowse link
G Cenpu centromere protein U part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004955403:24,245,197...24,278,631
Ensembl chrNW_004955403:24,245,185...24,279,734
JBrowse link
G Cenpw centromere protein W part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004955436:7,557,595...7,563,238
Ensembl chrNW_004955436:7,557,251...7,566,443
JBrowse link
G Cenpx centromere protein X part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004955506:1,149,566...1,151,919
Ensembl chrNW_004955506:1,149,566...1,151,919
JBrowse link
G H3f3a H3 histone, family 3A part_of ISO (PMID:25645018) MGI PMID:25645018 NCBI chrNW_004955489:269,900...278,398
Ensembl chrNW_004955489:269,900...278,398
JBrowse link
G Itgb3bp integrin subunit beta 3 binding protein part_of ISO (PMID:36085283) ComplexPortal PMID:36085283 NCBI chrNW_004955423:26,510,979...26,568,796
Ensembl chrNW_004955423:26,510,255...26,570,884
JBrowse link
G Orc2 origin recognition complex subunit 2 part_of ISO (PMID:14519686) MGI PMID:14519686 NCBI chrNW_004955403:576,268...628,068
Ensembl chrNW_004955403:577,955...628,068
JBrowse link
kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahctf1 AT-hook containing transcription factor 1 located_in ISO (PMID:17098863) UniProt PMID:17098863 NCBI chrNW_004955406:9,687,237...9,754,426
Ensembl chrNW_004955406:9,688,749...9,744,998
JBrowse link
G Anapc16 anaphase promoting complex subunit 16 located_in ISO (PMID:20813266) UniProt PMID:20813266 NCBI chrNW_004955437:19,367,662...19,381,607
Ensembl chrNW_004955437:19,367,662...19,381,603
JBrowse link
G Apc APC regulator of WNT signaling pathway located_in ISO (PMID:11283619) UniProt PMID:11283619 NCBI chrNW_004955418:2,567,804...2,675,062
Ensembl chrNW_004955418:2,566,975...2,674,832
JBrowse link
G Aurkb aurora kinase B part_of
is_active_in
ISO (PMID:22024163)
(PMID:26829474)
CACAO
UniProt
PMID:22024163 PMID:26829474 NCBI chrNW_004955467:8,715,387...8,720,889
Ensembl chrNW_004955467:8,715,136...8,723,932
JBrowse link
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase located_in ISO (PMID:15020684), (PMID:16760428), (PMID:17227893), (PMID:19465021), (PMID:22331848)
(PMID:15226446), (PMID:17227893), (PMID:17938250)
UniProt
MGI
PMID:15020684 PMID:15226446 PMID:16760428 PMID:17227893 PMID:17938250 More... NCBI chrNW_004955470:3,152,798...3,190,185
Ensembl chrNW_004955470:3,152,758...3,191,888
JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B located_in ISO (PMID:12925705), (PMID:17227893), (PMID:17363900), (PMID:19465021), (PMID:20220147), (PMID:22331848), (PMID:9660858), (PMID:9763420)
(PMID:17227893)
(PMID:12925705), (PMID:15226446), (PMID:17938250), (PMID:18765791), (PMID:32284991), (PMID:35167144)
UniProt
MGI
PMID:9660858 PMID:9763420 PMID:12925705 PMID:15226446 PMID:17227893 More... NCBI chrNW_004955416:7,105,302...7,159,121
Ensembl chrNW_004955416:7,105,261...7,160,012
JBrowse link
G Bub3 BUB3 mitotic checkpoint protein located_in ISO (PMID:9660858)
(PMID:35167144)
UniProt PMID:9660858 PMID:35167144 NCBI chrNW_004955477:1,305,937...1,319,330
Ensembl chrNW_004955477:1,305,629...1,321,562
JBrowse link
G Cbx5 chromobox 5 located_in ISO (PMID:14519686) MGI PMID:14519686 NCBI chrNW_004955458:1,486,951...1,529,649
Ensembl chrNW_004955458:1,486,951...1,505,653
JBrowse link
G Cdc20 cell division cycle 20 located_in ISO (PMID:32666501), (PMID:33898437) UniProt PMID:32666501 PMID:33898437 NCBI chrNW_004955537:2,941,265...2,945,158
Ensembl chrNW_004955537:2,941,265...2,945,158
JBrowse link
G Cdt1 chromatin licensing and DNA replication factor 1 located_in ISO (PMID:22581055) CAFA PMID:22581055 NCBI chrNW_004955541:2,683,030...2,687,883
Ensembl chrNW_004955541:2,683,408...2,687,102
JBrowse link
G Cenpc centromere protein C located_in ISO (PMID:21529714) UniProt PMID:21529714 GO_REF:0000052 NCBI chrNW_004955447:5,345,617...5,406,889
Ensembl chrNW_004955447:5,345,896...5,406,730
JBrowse link
G Cenpe centromere protein E located_in ISO (PMID:11682612), (PMID:12925705), (PMID:25395579), (PMID:25918224), (PMID:9763420)
(PMID:12925705), (PMID:17938250), (PMID:18765791)
UniProt
MGI
PMID:9763420 PMID:11682612 PMID:12925705 PMID:17938250 PMID:18765791 More... NCBI chrNW_004955496:5,468,759...5,514,915
Ensembl chrNW_004955496:5,469,239...5,513,574
JBrowse link
G Cenpf centromere protein F located_in
NOT|located_in
ISO (PMID:17363900), (PMID:7542657), (PMID:9763420)
(PMID:10373470)
UniProt
MGI
PMID:7542657 PMID:9763420 PMID:10373470 PMID:17363900 NCBI chrNW_004955406:3,225,788...3,273,037
Ensembl chrNW_004955406:3,223,993...3,273,714
JBrowse link
G Cenph centromere protein H located_in ISO (PMID:11092768)
(PMID:10488063)
(PMID:20212317)
MGI
UniProt
PMID:10488063 PMID:11092768 PMID:20212317 NCBI chrNW_004955446:131,703...135,873 JBrowse link
G Cenpi centromere protein I located_in ISO (PMID:20212317) UniProt PMID:20212317 NCBI chrNW_004955503:7,237,080...7,341,702 JBrowse link
G Cenpt centromere protein T located_in ISO (PMID:21529714) UniProt PMID:21529714 NCBI chrNW_004955484:8,862,221...8,867,881
Ensembl chrNW_004955484:8,862,206...8,867,771
JBrowse link
G Cenpv centromere protein V located_in ISO (PMID:18772885) UniProt PMID:18772885 NCBI chrNW_004955467:1,657,765...1,669,758 JBrowse link
G Cenpw centromere protein W located_in ISO (PMID:21695110) UniProt PMID:21695110 NCBI chrNW_004955436:7,557,595...7,563,238
Ensembl chrNW_004955436:7,557,251...7,566,443
JBrowse link
G Champ1 chromosome alignment maintaining phosphoprotein 1 located_in ISO (PMID:21063390) UniProt PMID:21063390 NCBI chrNW_004955404:3,228...14,695
Ensembl chrNW_004955404:4,445...6,877
JBrowse link
G Chmp1a charged multivesicular body protein 1A located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004955541:3,216,972...3,223,636
Ensembl chrNW_004955541:3,216,972...3,223,634
JBrowse link
G Chmp1b charged multivesicular body protein 1B located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004955402:1,196,912...1,199,480 JBrowse link
G Chmp2a charged multivesicular body protein 2A located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004955584:1,156,828...1,160,056
Ensembl chrNW_004955584:1,156,828...1,160,056
JBrowse link
G Chmp2b charged multivesicular body protein 2B located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004955407:6,014,478...6,047,916
Ensembl chrNW_004955407:6,014,478...6,047,916
JBrowse link
G Chmp4b charged multivesicular body protein 4B located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004955422:27,482,239...27,526,798
Ensembl chrNW_004955422:27,478,698...27,526,575
JBrowse link
G Chmp4c charged multivesicular body protein 4C located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004955417:96,674...135,601
Ensembl chrNW_004955417:96,865...137,739
JBrowse link
G Chmp6 charged multivesicular body protein 6 located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004955506:1,987,710...1,994,731
Ensembl chrNW_004955506:1,987,195...1,994,666
JBrowse link
G Chmp7 charged multivesicular body protein 7 located_in ISO (PMID:26040712) ComplexPortal PMID:26040712 NCBI chrNW_004955403:46,467,463...46,478,897
Ensembl chrNW_004955403:46,467,463...46,478,897
JBrowse link
G Ckap5 cytoskeleton associated protein 5 located_in ISO (PMID:25596274) UniProt PMID:25596274 NCBI chrNW_004955422:1,266,686...1,354,323
Ensembl chrNW_004955422:1,279,158...1,353,894
JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 located_in ISO MMO:0000538
(PMID:12837247)
RGD
UniProt
PMID:12837247 PMID:28351621 RGD:27096077 NCBI chrNW_004955459:8,382,671...8,628,048
Ensembl chrNW_004955459:8,408,160...8,629,344
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 located_in ISO (PMID:16866869) UniProt PMID:16866869 NCBI chrNW_004955421:767,648...957,160
Ensembl chrNW_004955421:767,210...897,457
JBrowse link
G Dctn1 dynactin subunit 1 located_in ISO (PMID:19468067), (PMID:23027904) UniProt PMID:19468067 PMID:23027904 NCBI chrNW_004955424:11,362,240...11,413,140
Ensembl chrNW_004955424:11,392,812...11,413,140
JBrowse link
G Dctn2 dynactin subunit 2 located_in ISO (PMID:8647893) RGD
UniProt
PMID:8647893 RGD:1331348 NCBI chrNW_004955458:5,247,871...5,264,424
Ensembl chrNW_004955458:5,247,871...5,265,242
JBrowse link
G Dctn4 dynactin subunit 4 ISO RGD PMID:10607597 RGD:70710 NCBI chrNW_004955415:3,850,475...3,886,953
Ensembl chrNW_004955415:3,850,086...3,886,953
JBrowse link
G Dsn1 DSN1 component of MIS12 kinetochore complex located_in ISO (PMID:15371340)
(PMID:32483152)
WB
MGI
PMID:15371340 PMID:32483152 GO_REF:0000052 NCBI chrNW_004955422:24,876,340...24,896,435 JBrowse link
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 located_in ISO (PMID:19229290) UniProt PMID:19229290 NCBI chrNW_004955432:12,383,582...12,657,491
Ensembl chrNW_004955432:12,353,993...12,658,157
JBrowse link
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 located_in ISO (PMID:19229290) RGD
UniProt
PMID:19229290 PMID:21169557 RGD:13207422 NCBI chrNW_004955620:46,535...82,595
Ensembl chrNW_004955620:46,556...82,595
JBrowse link
G Dync1li2 dynein cytoplasmic 1 light intermediate chain 2 ISO RGD PMID:21169557 RGD:13207422 NCBI chrNW_004955433:23,262,981...23,286,506
Ensembl chrNW_004955433:23,262,981...23,287,067
JBrowse link
G Dynll1 dynein light chain LC8-type 1 located_in ISO (PMID:20133940) UniProt PMID:20133940 NCBI chrNW_004955455:11,148,041...11,150,860
Ensembl chrNW_004955455:11,148,047...11,150,859
JBrowse link
G Dynlt3 dynein light chain Tctex-type 3 located_in ISO (PMID:17289665) RGD
UniProt
PMID:17289665 RGD:8554144 NCBI chrNW_004955587:828,730...838,614
Ensembl chrNW_004955587:827,278...838,869
JBrowse link
G Fbxo28 F-box protein 28 located_in ISO (PMID:20813266) UniProt PMID:20813266 NCBI chrNW_004955520:1,169,624...1,198,277
Ensembl chrNW_004955520:1,169,447...1,198,426
JBrowse link
G Firrm FIGNL1 interacting regulator of recombination and mitosis located_in ISO (PMID:34260926) UniProt PMID:34260926 NCBI chrNW_004955462:7,477,260...7,518,227
Ensembl chrNW_004955462:7,476,887...7,518,153
JBrowse link
G Gpatch11 G-patch domain containing 11 located_in ISO (PMID:20813266) UniProt PMID:20813266 NCBI chrNW_004955441:4,879,410...4,890,775
Ensembl chrNW_004955441:4,879,338...4,891,807
JBrowse link
G Gtf2b general transcription factor IIB is_active_in ISO (PMID:24244602) MGI PMID:24244602 NCBI chrNW_004955423:5,420,795...5,447,148
Ensembl chrNW_004955423:5,420,584...5,447,148
JBrowse link
G Hjurp Holliday junction recognition protein located_in ISO (PMID:19410545) UniProt PMID:19410545 NCBI chrNW_004955453:2,323,018...2,335,090
Ensembl chrNW_004955453:2,322,446...2,334,588
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U located_in ISO (PMID:21242313) UniProt PMID:21242313 NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554
JBrowse link
G Hsf1 heat shock transcription factor 1 located_in ISO (PMID:18794143) UniProt PMID:18794143 NCBI chrNW_004955454:2,907,265...2,932,352
Ensembl chrNW_004955454:2,907,265...2,932,351
JBrowse link
G Incenp inner centromere protein located_in ISO (PMID:16760428) UniProt PMID:16760428 GO_REF:0000052 NCBI chrNW_004955511:5,705,948...5,724,167
Ensembl chrNW_004955511:5,706,201...5,720,772
JBrowse link
G Itgb3bp integrin subunit beta 3 binding protein located_in ISO (PMID:28795467) MGI PMID:28795467 NCBI chrNW_004955423:26,510,979...26,568,796
Ensembl chrNW_004955423:26,510,255...26,570,884
JBrowse link
G Kat2b lysine acetyltransferase 2B located_in ISO (PMID:14519686) MGI PMID:14519686 NCBI chrNW_004955430:12,109,493...12,196,102
Ensembl chrNW_004955430:12,128,069...12,198,117
JBrowse link
G Kat5 lysine acetyltransferase 5 located_in ISO (PMID:26829474) UniProt PMID:26829474 NCBI chrNW_004955422:19,557,498...19,565,044
Ensembl chrNW_004955422:19,557,498...19,565,036
JBrowse link
G Kif18a kinesin family member 18A located_in ISO (PMID:20981276) MGI PMID:20981276 NCBI chrNW_004955476:7,058,682...7,117,496
Ensembl chrNW_004955476:7,058,573...7,109,610
JBrowse link
G Kif2c kinesin family member 2C located_in ISO (PMID:14960279), (PMID:23891108) UniProt PMID:14960279 PMID:23891108 NCBI chrNW_004955464:13,453,637...13,475,447
Ensembl chrNW_004955464:13,453,217...13,475,322
JBrowse link
G Knl1 kinetochore scaffold 1 located_in ISO (PMID:35167144)
(PMID:15371340), (PMID:19893618)
UniProt PMID:15371340 PMID:19893618 PMID:35167144 NCBI chrNW_004955416:7,498,983...7,561,620
Ensembl chrNW_004955416:7,500,415...7,562,273
JBrowse link
G Knstrn kinetochore localized astrin (SPAG5) binding protein located_in ISO (PMID:21402792) UniProt PMID:21402792 NCBI chrNW_004955416:7,311,483...7,322,272
Ensembl chrNW_004955416:7,311,627...7,321,553
JBrowse link
G Lrwd1 leucine rich repeats and WD repeat domain containing 1 located_in ISO (PMID:20813266) UniProt PMID:20813266 NCBI chrNW_004955456:15,151,275...15,158,332
Ensembl chrNW_004955456:15,151,398...15,158,350
JBrowse link
G Mad1l1 mitotic arrest deficient 1 like 1 located_in ISO (PMID:17504913), (PMID:17938250), (PMID:21558374), (PMID:35167144)
(PMID:17363900), (PMID:20133940), (PMID:22351768), (PMID:22493223)
MGI
UniProt
PMID:17363900 PMID:17504913 PMID:17938250 PMID:20133940 PMID:21558374 More... NCBI chrNW_004955460:9,340,728...9,672,478
Ensembl chrNW_004955460:9,340,681...9,672,134
JBrowse link
G Mad2l1 mitotic arrest deficient 2 like 1 located_in ISO (PMID:17363900), (PMID:19229290), (PMID:19468067), (PMID:20133940), (PMID:8824189)
(PMID:10964468), (PMID:17504913), (PMID:19075002), (PMID:19376971)
UniProt
MGI
PMID:8824189 PMID:10964468 PMID:17363900 PMID:17504913 PMID:19075002 More... NCBI chrNW_004955428:20,421,718...20,443,394
Ensembl chrNW_004955428:20,421,723...20,430,307
JBrowse link
G Meaf6 MYST/Esa1 associated factor 6 located_in ISO (PMID:20813266) UniProt PMID:20813266 NCBI chrNW_004955452:15,325,227...15,347,175
Ensembl chrNW_004955452:15,325,227...15,347,175
JBrowse link
G Meikin meiotic kinetochore factor located_in ISO (PMID:25533956) UniProt PMID:25533956 NCBI chrNW_004955408:3,245,147...3,331,795
Ensembl chrNW_004955408:3,244,704...3,331,985
JBrowse link
G Mis12 MIS12 kinetochore complex component located_in ISO (PMID:15371340) WB PMID:15371340 NCBI chrNW_004955467:10,837,570...10,842,131
Ensembl chrNW_004955467:10,837,832...10,842,123
JBrowse link
G Mtbp MDM2 binding protein located_in ISO (PMID:21274008) MGI PMID:21274008 NCBI chrNW_004955417:25,824,251...25,893,752
Ensembl chrNW_004955417:25,824,441...25,893,521
JBrowse link
G Mtcl1 microtubule crosslinking factor 1 located_in ISO (PMID:33587225) UniProt PMID:33587225 NCBI chrNW_004955402:2,980,539...3,076,283
Ensembl chrNW_004955402:2,979,547...3,076,283
JBrowse link
G Ncapd3 non-SMC condensin II complex subunit D3 located_in ISO (PMID:21795393) MGI PMID:21795393 NCBI chrNW_004955412:34,967,464...35,035,103
Ensembl chrNW_004955412:34,963,854...35,035,111
JBrowse link
G Ndc80 NDC80 kinetochore complex component located_in ISO (PMID:14699129), (PMID:15961401), (PMID:17363900), (PMID:19468067)
(PMID:18940925), (PMID:23541922), (PMID:32483152)
UniProt
MGI
PMID:14699129 PMID:15961401 PMID:17363900 PMID:18940925 PMID:19468067 More... NCBI chrNW_004955402:7,692,009...7,728,876
Ensembl chrNW_004955402:7,691,937...7,729,690
JBrowse link
G Nde1 nudE neurodevelopment protein 1 located_in ISO (PMID:17600710) UniProt PMID:17600710 NCBI chrNW_004955442:495,704...530,296
Ensembl chrNW_004955442:495,704...542,976
JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 located_in ISO (PMID:17600710) UniProt PMID:17600710 NCBI chrNW_004955467:8,432,806...8,486,563
Ensembl chrNW_004955467:8,432,806...8,468,155
JBrowse link
G Nek2 NIMA related kinase 2 located_in ISO (PMID:14978040), (PMID:17621308) UniProt PMID:14978040 PMID:17621308 NCBI chrNW_004955406:5,553,661...5,563,648
Ensembl chrNW_004955406:5,553,819...5,566,361
JBrowse link
G Nsl1 NSL1 component of MIS12 kinetochore complex located_in ISO (PMID:15371340) WB PMID:15371340 NCBI chrNW_004955406:4,764,439...4,798,499
Ensembl chrNW_004955406:4,764,130...4,799,204
JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex located_in ISO (PMID:15961401) ComplexPortal PMID:15961401 GO_REF:0000052 NCBI chrNW_004955462:13,082,874...13,142,709
Ensembl chrNW_004955462:13,082,047...13,142,944
JBrowse link
G Nup107 nucleoporin 107 located_in ISO (PMID:17363900) UniProt PMID:17363900 NCBI chrNW_004955458:15,148,773...15,201,717
Ensembl chrNW_004955458:15,149,054...15,201,635
JBrowse link
G Nup133 nucleoporin 133 located_in ISO (PMID:17098863) UniProt PMID:17098863 NCBI chrNW_004955492:8,583,902...8,641,891
Ensembl chrNW_004955492:8,583,869...8,643,433
JBrowse link
G Nup160 nucleoporin 160 located_in ISO (PMID:15146057) UniProt PMID:15146057 NCBI chrNW_004955422:561,339...598,598
Ensembl chrNW_004955422:561,339...599,575
JBrowse link
G Nup37 nucleoporin 37 located_in ISO (PMID:15146057) UniProt PMID:15146057 NCBI chrNW_004955405:37,215,324...37,297,762
Ensembl chrNW_004955405:37,258,294...37,297,762
JBrowse link
G Nup43 nucleoporin 43 located_in ISO (PMID:15146057) UniProt PMID:15146057 NCBI chrNW_004955439:11,534,519...11,548,977
Ensembl chrNW_004955439:11,534,512...11,553,598
JBrowse link
G Nup85 nucleoporin 85 located_in ISO (PMID:15146057) UniProt PMID:15146057 NCBI chrNW_004955553:2,079,418...2,107,894
Ensembl chrNW_004955553:2,079,503...2,107,807
JBrowse link
G Nup98 nucleoporin 98 and 96 precursor located_in ISO (PMID:15146057) UniProt PMID:15146057 NCBI chrNW_004955414:19,499,577...19,607,075
Ensembl chrNW_004955414:19,499,406...19,607,075
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 located_in ISO (PMID:11056532), (PMID:11889140), (PMID:11940666) UniProt PMID:11056532 PMID:11889140 PMID:11940666 NCBI chrNW_004955481:608,897...686,454
Ensembl chrNW_004955481:608,897...686,452
JBrowse link
G Pbrm1 polybromo 1 located_in ISO (PMID:14519686) MGI PMID:14519686 NCBI chrNW_004955430:2,536,086...2,671,094
Ensembl chrNW_004955430:2,536,086...2,670,617
JBrowse link
G Phf2 PHD finger protein 2 located_in ISO (PMID:20813266) UniProt PMID:20813266 NCBI chrNW_004955515:4,428,068...4,471,642
Ensembl chrNW_004955515:4,429,957...4,471,641
JBrowse link
G Pinx1 PIN2 (TERF1) interacting telomerase inhibitor 1 located_in ISO (PMID:19393617) UniProt PMID:19393617 NCBI chrNW_004955403:52,284,378...52,361,924
Ensembl chrNW_004955403:52,284,166...52,362,206
JBrowse link
G Plk1 polo like kinase 1 located_in ISO (PMID:25533956)
(PMID:17617734), (PMID:18477460), (PMID:18615013), (PMID:21041660), (PMID:23455478), (PMID:24157919), (PMID:25395579)
MGI
UniProt
PMID:17617734 PMID:18477460 PMID:18615013 PMID:21041660 PMID:23455478 More... NCBI chrNW_004955493:2,206,353...2,217,231
Ensembl chrNW_004955493:2,206,353...2,217,231
JBrowse link
G Ppp1r12a protein phosphatase 1 regulatory subunit 12A located_in ISO (PMID:18477460) UniProt PMID:18477460 NCBI chrNW_004955405:18,594,191...18,727,345
Ensembl chrNW_004955405:18,596,541...18,727,345
JBrowse link
G Prp4k pre-mRNA processing factor kinase PRP4K located_in ISO (PMID:17998396) UniProt PMID:17998396 NCBI chrNW_004955465:9,359,634...9,392,913
Ensembl chrNW_004955465:9,359,634...9,392,913
JBrowse link
G Psen1 presenilin 1 located_in ISO (PMID:9298903) UniProt PMID:9298903 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737
JBrowse link
G Psen2 presenilin 2 located_in ISO (PMID:9298903) UniProt PMID:9298903 NCBI chrNW_004955406:5,727,367...5,748,798
Ensembl chrNW_004955406:5,727,367...5,752,234
JBrowse link
G Rangap1 Ran GTPase activating protein 1 located_in ISO (PMID:17363900) UniProt PMID:17363900 NCBI chrNW_004955413:26,869,487...26,894,192
Ensembl chrNW_004955413:26,867,812...26,890,284
JBrowse link
G Rassf2 Ras association domain family member 2 located_in ISO (PMID:20813266) UniProt PMID:20813266 NCBI chrNW_004955415:15,500,726...15,542,939
Ensembl chrNW_004955415:15,500,726...15,541,135
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in ISO (PMID:18765791) MGI PMID:18765791 NCBI chrNW_004955409:36,223,783...36,231,749
Ensembl chrNW_004955409:36,223,844...36,230,948
JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component located_in ISO (PMID:15146057) UniProt PMID:15146057 NCBI chrNW_004955561:1,707,053...1,723,715
Ensembl chrNW_004955561:1,707,053...1,723,862
JBrowse link
G Seh1l SEH1 like nucleoporin located_in ISO (PMID:15146057), (PMID:17363900) UniProt PMID:15146057 PMID:17363900 NCBI chrNW_004955402:679,109...698,624
Ensembl chrNW_004955402:681,436...698,624
JBrowse link
G Sgo1 shugoshin 1 located_in ISO (PMID:18084284)
(PMID:16582621), (PMID:17617734), (PMID:17621308), (PMID:18331714), (PMID:24157919)
UniProt PMID:16582621 PMID:17617734 PMID:17621308 PMID:18084284 PMID:18331714 More... GO_REF:0000052 NCBI chrNW_004955430:12,200,601...12,216,845
Ensembl chrNW_004955430:12,198,397...12,213,201
JBrowse link
G Sgo2 shugoshin 2 located_in ISO (PMID:18084284) UniProt PMID:18084284 NCBI chrNW_004955403:879,354...905,605 JBrowse link
G Sin3a SIN3 transcription regulator family member A located_in ISO (PMID:14519686) MGI PMID:14519686 NCBI chrNW_004955450:2,804,551...2,870,450
Ensembl chrNW_004955450:2,808,130...2,870,450
JBrowse link
G Ska1 spindle and kinetochore associated complex subunit 1 located_in ISO (PMID:24413531)
(PMID:21633384)
UniProt
ComplexPortal
PMID:21633384 PMID:24413531 NCBI chrNW_004955402:35,382,531...35,395,787
Ensembl chrNW_004955402:35,382,412...35,395,814
JBrowse link
G Ska2 spindle and kinetochore associated complex subunit 2 located_in ISO (PMID:21633384) ComplexPortal PMID:21633384 NCBI chrNW_004955451:3,839,978...3,862,200 JBrowse link
G Ska3 spindle and kinetochore associated complex subunit 3 located_in ISO (PMID:20813266)
(PMID:21633384)
UniProt
ComplexPortal
PMID:20813266 PMID:21633384 NCBI chrNW_004955497:1,874,911...1,896,588
Ensembl chrNW_004955497:1,875,695...1,896,587
JBrowse link
G Smc1a structural maintenance of chromosomes 1A located_in ISO (PMID:11682612), (PMID:12199140) BHF-UCL PMID:11682612 PMID:12199140 NCBI chrNW_004955475:421,472...468,286
Ensembl chrNW_004955475:421,409...468,324
JBrowse link
G Spag5 sperm associated antigen 5 located_in ISO (PMID:21402792), (PMID:27462074) UniProt PMID:21402792 PMID:27462074 NCBI chrNW_004955481:4,558,748...4,576,320
Ensembl chrNW_004955481:4,558,851...4,576,038
JBrowse link
G Spc24 SPC24 component of NDC80 kinetochore complex located_in ISO (PMID:15961401) ComplexPortal PMID:15961401 NCBI chrNW_004955774:5,456...9,810
Ensembl chrNW_004955774:5,658...9,769
JBrowse link
G Spc25 SPC25 component of NDC80 kinetochore complex located_in ISO (PMID:14699129), (PMID:15961401) UniProt PMID:14699129 PMID:15961401 NCBI chrNW_004955449:5,533,464...5,556,341
Ensembl chrNW_004955449:5,533,450...5,557,835
JBrowse link
G Spout1 SPOUT domain containing methyltransferase 1 located_in ISO (PMID:25657325) UniProt PMID:25657325 NCBI chrNW_004955570:1,202,987...1,211,052
Ensembl chrNW_004955570:1,204,040...1,211,020
JBrowse link
G Ss18l1 SS18L1 subunit of BAF chromatin remodeling complex located_in ISO (PMID:18331714) MGI PMID:18331714 NCBI chrNW_004955528:1,849,457...1,881,138
Ensembl chrNW_004955528:1,849,462...1,870,872
JBrowse link
G Sugt1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone located_in ISO (PMID:32483152) MGI PMID:32483152 NCBI chrNW_004955404:50,916,715...50,947,619
Ensembl chrNW_004955404:50,917,177...50,947,522
JBrowse link
G Tex14 testis expressed 14, intercellular bridge forming factor located_in ISO (PMID:22405274) UniProt PMID:22405274 NCBI chrNW_004955451:4,206,114...4,296,969
Ensembl chrNW_004955451:4,179,591...4,297,024
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 located_in ISO (PMID:11801725) MGI PMID:11801725 NCBI chrNW_004955416:9,962,736...10,035,433
Ensembl chrNW_004955416:9,962,897...10,035,278
JBrowse link
G Tpr translocated promoter region, nuclear basket protein located_in
NOT|located_in
ISO (PMID:20133940)
(PMID:19273613)
UniProt PMID:19273613 PMID:20133940 NCBI chrNW_004955406:24,742,525...24,805,989
Ensembl chrNW_004955406:24,742,525...24,805,989
JBrowse link
G Trappc12 trafficking protein particle complex subunit 12 located_in ISO (PMID:25918224) UniProt PMID:25918224 NCBI chrNW_004955487:3,824,872...3,863,859
Ensembl chrNW_004955487:3,824,872...3,864,331
JBrowse link
G Ttk TTK protein kinase located_in ISO (PMID:21558374) MGI PMID:21558374 NCBI chrNW_004955502:7,824,194...7,866,879 JBrowse link
G Xpo1 exportin 1 located_in ISO (PMID:17363900) UniProt PMID:17363900 NCBI chrNW_004955424:22,370,006...22,420,568
Ensembl chrNW_004955424:22,370,006...22,420,568
JBrowse link
G Znf207 zinc finger protein 207 located_in ISO (PMID:24462186)
(PMID:24462187)
UniProt PMID:24462186 PMID:24462187 NCBI chrNW_004955481:7,307,520...7,325,591
Ensembl chrNW_004955481:7,307,521...7,328,198
JBrowse link
G Znf276 zinc finger protein 276 located_in ISO (PMID:20813266) UniProt PMID:20813266 NCBI chrNW_004955541:3,259,945...3,272,990
Ensembl chrNW_004955541:3,259,479...3,272,666
JBrowse link
G Zw10 zw10 kinetochore protein located_in ISO (PMID:11682612), (PMID:15485811), (PMID:15824131), (PMID:19229290), (PMID:19468067) UniProt PMID:11682612 PMID:15485811 PMID:15824131 PMID:19229290 PMID:19468067 NCBI chrNW_004955412:15,354,918...15,391,233
Ensembl chrNW_004955412:15,350,285...15,391,996
JBrowse link
G Zwilch zwilch kinetochore protein located_in ISO (PMID:12686595), (PMID:15824131) UniProt PMID:12686595 PMID:15824131 NCBI chrNW_004955450:9,139,214...9,170,136
Ensembl chrNW_004955450:9,139,169...9,169,921
JBrowse link
G Zwint ZW10 interacting kinetochore protein located_in ISO (PMID:26486467)
(PMID:11682612), (PMID:15485811)
UniProt
BHF-UCL
PMID:11682612 PMID:15485811 PMID:26486467 NCBI chrNW_004955425:10,477,224...10,486,372
Ensembl chrNW_004955425:10,477,331...10,486,288
JBrowse link
Knl1/Spc105 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Knl1 kinetochore scaffold 1 part_of ISO (PMID:27881301) UniProt PMID:27881301 NCBI chrNW_004955416:7,498,983...7,561,620
Ensembl chrNW_004955416:7,500,415...7,562,273
JBrowse link
G Zwint ZW10 interacting kinetochore protein part_of ISO (PMID:27881301) UniProt PMID:27881301 NCBI chrNW_004955425:10,477,224...10,486,372
Ensembl chrNW_004955425:10,477,331...10,486,288
JBrowse link
late recombination nodule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 located_in ISO (PMID:27760146) MGI PMID:27760146 NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526
JBrowse link
lateral element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase located_in ISO (PMID:10728666) UniProt PMID:10728666 NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687
JBrowse link
G Brca1 BRCA1 DNA repair associated located_in ISO (PMID:9774970) MGI PMID:9774970 NCBI chrNW_004955451:16,819,463...16,870,780
Ensembl chrNW_004955451:16,819,023...16,855,528
JBrowse link
G Brca2 BRCA2 DNA repair associated located_in ISO (PMID:9774970) MGI PMID:9774970 NCBI chrNW_004955431:13,449,287...13,526,878
Ensembl chrNW_004955431:13,449,543...13,527,432
JBrowse link
G Dmc1 DNA meiotic recombinase 1 located_in ISO (PMID:30718482) MGI PMID:30718482 NCBI chrNW_004955413:24,685,311...24,724,269
Ensembl chrNW_004955413:24,684,073...24,724,344
JBrowse link
G Incenp inner centromere protein located_in ISO (PMID:19283064) MGI PMID:19283064 NCBI chrNW_004955511:5,705,948...5,724,167
Ensembl chrNW_004955511:5,706,201...5,720,772
JBrowse link
G Kash5 KASH domain containing 5 located_in ISO (PMID:24062341) MGI PMID:24062341 NCBI chrNW_004955559:1,416,844...1,438,451 JBrowse link
G Mei4 meiotic double-stranded break formation protein 4 located_in ISO (PMID:20551173) MGI PMID:20551173 NCBI chrNW_004955502:5,835,608...6,017,945
Ensembl chrNW_004955502:5,831,658...6,018,521
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 located_in ISO (PMID:21743440) MGI PMID:21743440 NCBI chrNW_004955596:455,932...485,853
Ensembl chrNW_004955596:457,835...486,046
JBrowse link
G Rad51 RAD51 recombinase located_in ISO (PMID:9774970)
(PMID:18694567), (PMID:21743440)
MGI PMID:9774970 PMID:18694567 PMID:21743440 NCBI chrNW_004955416:7,566,715...7,590,628
Ensembl chrNW_004955416:7,566,686...7,590,628
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in ISO (PMID:15870106), (PMID:32328639) MGI PMID:15870106 PMID:32328639 NCBI chrNW_004955409:36,223,783...36,231,749
Ensembl chrNW_004955409:36,223,844...36,230,948
JBrowse link
G Rpa1 replication protein A1 located_in ISO (PMID:21743440), (PMID:22711701) MGI PMID:21743440 PMID:22711701 NCBI chrNW_004955481:1,304,035...1,361,806 JBrowse link
G Smc1a structural maintenance of chromosomes 1A ISO MMO:0000662 RGD PMID:10652260 RGD:1331378 NCBI chrNW_004955475:421,472...468,286
Ensembl chrNW_004955475:421,409...468,324
JBrowse link
G Smc1b structural maintenance of chromosomes 1B located_in ISO (PMID:15870106), (PMID:22711701) MGI PMID:15870106 PMID:22711701 NCBI chrNW_004955413:29,709,473...29,765,043
Ensembl chrNW_004955413:29,709,473...29,765,043
JBrowse link
G Smc3 structural maintenance of chromosomes 3 located_in ISO (PMID:15870106), (PMID:22711701), (PMID:32328639) MGI PMID:15870106 PMID:22711701 PMID:32328639 NCBI chrNW_004955485:815,281...848,561 JBrowse link
G Stag3 STAG3 cohesin complex component located_in ISO (PMID:22711701) MGI PMID:22711701 NCBI chrNW_004955573:602,635...631,775
Ensembl chrNW_004955573:602,016...630,936
JBrowse link
G Sycp2 synaptonemal complex protein 2 located_in ISO PMID:9933407
(PMID:18283110), (PMID:22011390), (PMID:22711701), (PMID:23133398)
UniProt
MGI
PMID:9933407 PMID:18283110 PMID:22011390 PMID:22711701 PMID:23133398 RGD:11035335 NCBI chrNW_004955528:3,809,438...3,887,055
Ensembl chrNW_004955528:3,809,438...3,886,312
JBrowse link
G Sycp2l synaptonemal complex protein 2 like located_in ISO (PMID:26362258) MGI PMID:26362258 NCBI chrNW_004955465:3,440,106...3,518,840 JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in ISO PMID:9933407
(PMID:10678170), (PMID:18802469), (PMID:19283064), (PMID:21539824), (PMID:21743440), (PMID:22011390), (PMID:22711701), (PMID:22854038), (PMID:23133398), (PMID:23555294), (PMID:25533956), (PMID:25675407)
UniProt
MGI
PMID:9933407 PMID:10678170 PMID:18802469 PMID:19283064 PMID:21539824 More... RGD:11035335 NCBI chrNW_004955405:37,093,330...37,102,789
Ensembl chrNW_004955405:37,093,652...37,102,856
JBrowse link
MIS12/MIND type complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dsn1 DSN1 component of MIS12 kinetochore complex part_of ISO (PMID:16585270), (PMID:20819937), (PMID:27881301) UniProt PMID:16585270 PMID:20819937 PMID:27881301 NCBI chrNW_004955422:24,876,340...24,896,435 JBrowse link
G Mis12 MIS12 kinetochore complex component part_of ISO (PMID:16585270), (PMID:20819937), (PMID:27881301) UniProt PMID:16585270 PMID:20819937 PMID:27881301 NCBI chrNW_004955467:10,837,570...10,842,131
Ensembl chrNW_004955467:10,837,832...10,842,123
JBrowse link
G Nsl1 NSL1 component of MIS12 kinetochore complex part_of ISO (PMID:16585270), (PMID:20819937), (PMID:27881301) UniProt PMID:16585270 PMID:20819937 PMID:27881301 NCBI chrNW_004955406:4,764,439...4,798,499
Ensembl chrNW_004955406:4,764,130...4,799,204
JBrowse link
Ndc80 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ndc80 NDC80 kinetochore complex component part_of ISO (PMID:18455984)
(PMID:14699129), (PMID:20819937)
ComplexPortal
UniProt
PMID:14699129 PMID:18455984 PMID:20819937 NCBI chrNW_004955402:7,692,009...7,728,876
Ensembl chrNW_004955402:7,691,937...7,729,690
JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex part_of ISO (PMID:18455984)
(PMID:14699129), (PMID:20819937)
ComplexPortal
UniProt
PMID:14699129 PMID:18455984 PMID:20819937 NCBI chrNW_004955462:13,082,874...13,142,709
Ensembl chrNW_004955462:13,082,047...13,142,944
JBrowse link
G Spc24 SPC24 component of NDC80 kinetochore complex part_of ISO (PMID:18455984)
(PMID:14699129), (PMID:20819937)
ComplexPortal
UniProt
PMID:14699129 PMID:18455984 PMID:20819937 NCBI chrNW_004955774:5,456...9,810
Ensembl chrNW_004955774:5,658...9,769
JBrowse link
G Spc25 SPC25 component of NDC80 kinetochore complex part_of ISO (PMID:18455984)
(PMID:14699129), (PMID:20819937)
ComplexPortal
UniProt
PMID:14699129 PMID:18455984 PMID:20819937 NCBI chrNW_004955449:5,533,464...5,556,341
Ensembl chrNW_004955449:5,533,450...5,557,835
JBrowse link
outer kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bod1 biorientation of chromosomes in cell division 1 part_of ISO (PMID:17938248) UniProt PMID:17938248 NCBI chrNW_004955408:26,235,229...26,242,576 JBrowse link
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase part_of ISO (PMID:22331848) UniProt PMID:22331848 NCBI chrNW_004955470:3,152,798...3,190,185
Ensembl chrNW_004955470:3,152,758...3,191,888
JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B part_of ISO (PMID:19468067), (PMID:22331848)
(PMID:14519686), (PMID:19283064)
UniProt
MGI
PMID:14519686 PMID:19283064 PMID:19468067 PMID:22331848 NCBI chrNW_004955416:7,105,302...7,159,121
Ensembl chrNW_004955416:7,105,261...7,160,012
JBrowse link
G Ccnb1 cyclin B1 part_of ISO (PMID:18195732) BHF-UCL PMID:18195732 NCBI chrNW_004955446:140,661...149,500
Ensembl chrNW_004955446:140,093...149,500
JBrowse link
G Cenpe centromere protein E part_of ISO (PMID:19283064) MGI PMID:19283064 NCBI chrNW_004955496:5,468,759...5,514,915
Ensembl chrNW_004955496:5,469,239...5,513,574
JBrowse link
G Cenpf centromere protein F part_of ISO (PMID:7542657), (PMID:7642639), (PMID:7904902) UniProt PMID:7542657 PMID:7642639 PMID:7904902 NCBI chrNW_004955406:3,225,788...3,273,037
Ensembl chrNW_004955406:3,223,993...3,273,714
JBrowse link
G Crebbp CREB binding protein part_of ISO (PMID:14519686) MGI PMID:14519686 NCBI chrNW_004955442:13,559,496...13,691,913
Ensembl chrNW_004955442:13,559,496...13,692,004
JBrowse link
G Dsn1 DSN1 component of MIS12 kinetochore complex part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chrNW_004955422:24,876,340...24,896,435 JBrowse link
G Knl1 kinetochore scaffold 1 part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chrNW_004955416:7,498,983...7,561,620
Ensembl chrNW_004955416:7,500,415...7,562,273
JBrowse link
G Mis12 MIS12 kinetochore complex component part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chrNW_004955467:10,837,570...10,842,131
Ensembl chrNW_004955467:10,837,832...10,842,123
JBrowse link
G Ndc80 NDC80 kinetochore complex component part_of ISO (PMID:18195732), (PMID:24530301) BHF-UCL PMID:18195732 PMID:24530301 NCBI chrNW_004955402:7,692,009...7,728,876
Ensembl chrNW_004955402:7,691,937...7,729,690
JBrowse link
G Nsl1 NSL1 component of MIS12 kinetochore complex part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chrNW_004955406:4,764,439...4,798,499
Ensembl chrNW_004955406:4,764,130...4,799,204
JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chrNW_004955462:13,082,874...13,142,709
Ensembl chrNW_004955462:13,082,047...13,142,944
JBrowse link
G Plk1 polo like kinase 1 part_of ISO (PMID:18195732) BHF-UCL PMID:18195732 NCBI chrNW_004955493:2,206,353...2,217,231
Ensembl chrNW_004955493:2,206,353...2,217,231
JBrowse link
G Ska1 spindle and kinetochore associated complex subunit 1 part_of ISO (PMID:17093495), (PMID:19289083), (PMID:26981768), (PMID:28479321) UniProt PMID:17093495 PMID:19289083 PMID:26981768 PMID:28479321 NCBI chrNW_004955402:35,382,531...35,395,787
Ensembl chrNW_004955402:35,382,412...35,395,814
JBrowse link
G Ska2 spindle and kinetochore associated complex subunit 2 part_of ISO (PMID:17093495), (PMID:19289083), (PMID:28479321) UniProt PMID:17093495 PMID:19289083 PMID:28479321 NCBI chrNW_004955451:3,839,978...3,862,200 JBrowse link
G Ska3 spindle and kinetochore associated complex subunit 3 part_of ISO (PMID:19289083), (PMID:19646878), (PMID:28479321) UniProt PMID:19289083 PMID:19646878 PMID:28479321 NCBI chrNW_004955497:1,874,911...1,896,588
Ensembl chrNW_004955497:1,875,695...1,896,587
JBrowse link
G Spc24 SPC24 component of NDC80 kinetochore complex part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chrNW_004955774:5,456...9,810
Ensembl chrNW_004955774:5,658...9,769
JBrowse link
G Spc25 SPC25 component of NDC80 kinetochore complex part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chrNW_004955449:5,533,464...5,556,341
Ensembl chrNW_004955449:5,533,450...5,557,835
JBrowse link
G Spdl1 spindle apparatus coiled-coil protein 1 part_of ISO (PMID:19468067) UniProt PMID:19468067 NCBI chrNW_004955408:22,590,474...22,619,168
Ensembl chrNW_004955408:22,594,776...22,628,429
JBrowse link
G Zwint ZW10 interacting kinetochore protein part_of ISO (PMID:24530301) UniProt PMID:24530301 NCBI chrNW_004955425:10,477,224...10,486,372
Ensembl chrNW_004955425:10,477,331...10,486,288
JBrowse link
recombination nodule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msh4 mutS homolog 4 located_in ISO (PMID:27760146) MGI PMID:27760146 NCBI chrNW_004955423:17,093,573...17,154,910
Ensembl chrNW_004955423:17,093,573...17,154,910
JBrowse link
RZZ complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kntc1 kinetochore associated 1 part_of ISO (PMID:25849506)
(PMID:20462495)
ComplexPortal
UniProt
PMID:20462495 PMID:25849506 NCBI chrNW_004955482:6,040,964...6,119,814
Ensembl chrNW_004955482:6,043,456...6,115,816
JBrowse link
G Zw10 zw10 kinetochore protein part_of ISO (PMID:20462495)
(PMID:25849506)
UniProt
ComplexPortal
PMID:20462495 PMID:25849506 NCBI chrNW_004955412:15,354,918...15,391,233
Ensembl chrNW_004955412:15,350,285...15,391,996
JBrowse link
G Zwilch zwilch kinetochore protein part_of ISO (PMID:25849506)
(PMID:20462495)
ComplexPortal
UniProt
PMID:20462495 PMID:25849506 NCBI chrNW_004955450:9,139,214...9,170,136
Ensembl chrNW_004955450:9,139,169...9,169,921
JBrowse link
SKA complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ska1 spindle and kinetochore associated complex subunit 1 part_of ISO (PMID:31804178) UniProt PMID:31804178 NCBI chrNW_004955402:35,382,531...35,395,787
Ensembl chrNW_004955402:35,382,412...35,395,814
JBrowse link
G Ska2 spindle and kinetochore associated complex subunit 2 part_of ISO (PMID:31804178) UniProt PMID:31804178 NCBI chrNW_004955451:3,839,978...3,862,200 JBrowse link
G Ska3 spindle and kinetochore associated complex subunit 3 part_of ISO (PMID:31804178) UniProt PMID:31804178 NCBI chrNW_004955497:1,874,911...1,896,588
Ensembl chrNW_004955497:1,875,695...1,896,587
JBrowse link
Smc5-Smc6 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eid3 EP300 interacting inhibitor of differentiation 3 part_of ISO (PMID:18086888) UniProt PMID:18086888 NCBI chrNW_004955405:38,897,494...38,898,057 JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component part_of ISO (PMID:18086888)
(PMID:26919979)
UniProt
MGI
PMID:18086888 PMID:26919979 NCBI chrNW_004955493:5,468,028...5,498,490
Ensembl chrNW_004955493:5,466,929...5,490,712
JBrowse link
G Nsmce2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase part_of ISO (PMID:18086888) UniProt PMID:18086888 NCBI chrNW_004955461:199,356...451,716
Ensembl chrNW_004955461:201,764...451,776
JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component part_of ISO (PMID:18086888), (PMID:27427983) UniProt PMID:18086888 PMID:27427983 NCBI chrNW_004955416:29,261,347...29,262,696 JBrowse link
G Nsmce4a NSE4 homolog A, SMC5-SMC6 complex component part_of ISO (PMID:18086888) UniProt PMID:18086888 NCBI chrNW_004955477:300,467...312,110
Ensembl chrNW_004955477:300,467...312,434
JBrowse link
G Smc5 structural maintenance of chromosomes 5 part_of ISO (PMID:18086888)
(PMID:26919979)
UniProt
MGI
PMID:18086888 PMID:26919979 NCBI chrNW_004955434:2,742,276...2,848,384
Ensembl chrNW_004955434:2,742,373...2,848,337
JBrowse link
G Smc6 structural maintenance of chromosomes 6 part_of ISO (PMID:18086888)
(PMID:26919979)
UniProt
MGI
PMID:18086888 PMID:26919979 NCBI chrNW_004955469:456,023...552,794
Ensembl chrNW_004955469:453,353...552,279
JBrowse link
synaptonemal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnb1ip1 cyclin B1 interacting protein 1 located_in ISO (PMID:24390283) UniProt PMID:24390283 NCBI chrNW_004955550:1,108,764...1,138,862
Ensembl chrNW_004955550:1,108,449...1,138,862
JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 (inactive) located_in ISO (PMID:12764197) UniProt PMID:12764197 NCBI chrNW_004955456:14,291,445...14,318,310
Ensembl chrNW_004955456:14,291,260...14,318,310
JBrowse link
G Hormad1 HORMA domain containing 1 located_in ISO (PMID:22854038) MGI PMID:22854038 NCBI chrNW_004955413:130,214...155,381
Ensembl chrNW_004955413:132,711...152,720
JBrowse link
G Hormad2 HORMA domain containing 2 located_in ISO (PMID:22854038) MGI PMID:22854038 NCBI chrNW_004955455:4,309,397...4,462,932
Ensembl chrNW_004955455:4,317,319...4,424,645
JBrowse link
G Hspa2 heat shock protein family A (Hsp70) member 2 located_in ISO (PMID:8622925) MGI PMID:8622925 NCBI chrNW_004955466:5,344,366...5,347,707
Ensembl chrNW_004955466:5,344,366...5,347,707
JBrowse link
G Incenp inner centromere protein located_in ISO (PMID:12584241) MGI PMID:12584241 NCBI chrNW_004955511:5,705,948...5,724,167
Ensembl chrNW_004955511:5,706,201...5,720,772
JBrowse link
G Lig3 DNA ligase 3 located_in ISO (PMID:9001252) MGI PMID:9001252 NCBI chrNW_004955481:9,696,050...9,716,154
Ensembl chrNW_004955481:9,696,054...9,715,637
JBrowse link
G Mlh1 mutL homolog 1 located_in ISO PMID:16968740
(PMID:15467367), (PMID:16260499)
MGI PMID:15467367 PMID:16260499 PMID:16968740 RGD:8554354 NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526
JBrowse link
G Mlh3 mutL homolog 3 located_in ISO (PMID:15467367), (PMID:16260499) MGI PMID:15467367 PMID:16260499 NCBI chrNW_004955523:515,409...547,257
Ensembl chrNW_004955523:518,565...546,410
JBrowse link
G Msh4 mutS homolog 4 located_in ISO (PMID:10809667), (PMID:16260499) MGI PMID:10809667 PMID:16260499 NCBI chrNW_004955423:17,093,573...17,154,910
Ensembl chrNW_004955423:17,093,573...17,154,910
JBrowse link
G Msh5 mutS homolog 5 located_in ISO (PMID:16260499) MGI PMID:16260499 NCBI chrNW_004955437:275,976...297,268
Ensembl chrNW_004955437:279,744...297,153
JBrowse link
G P3h4 prolyl 3-hydroxylase family member 4 (inactive) ISO RGD PMID:1363622 RGD:633987 NCBI chrNW_004955451:16,020,101...16,024,063
Ensembl chrNW_004955451:16,020,101...16,024,084
JBrowse link
G Plk1 polo like kinase 1 located_in ISO (PMID:22854038) MGI PMID:22854038 NCBI chrNW_004955493:2,206,353...2,217,231
Ensembl chrNW_004955493:2,206,353...2,217,231
JBrowse link
G Rec8 REC8 meiotic recombination protein located_in ISO (PMID:12759374) MGI PMID:12759374 NCBI chrNW_004955409:36,223,783...36,231,749
Ensembl chrNW_004955409:36,223,844...36,230,948
JBrowse link
G Rnf212 ring finger protein 212 located_in ISO (PMID:23396135), (PMID:24390283) UniProt PMID:23396135 PMID:24390283 NCBI chrNW_004955514:525,430...559,037
Ensembl chrNW_004955514:525,085...559,153
JBrowse link
G Rnf212b ring finger protein 212B located_in ISO (PMID:38865271) UniProt PMID:38865271 NCBI chrNW_004955409:37,041,751...37,095,179 JBrowse link
G Smc1a structural maintenance of chromosomes 1A ISO MMO:0000679 RGD PMID:10652260 RGD:1331378 NCBI chrNW_004955475:421,472...468,286
Ensembl chrNW_004955475:421,409...468,324
JBrowse link
G Smc1b structural maintenance of chromosomes 1B located_in ISO (PMID:11564881), (PMID:16968740) MGI PMID:11564881 PMID:16968740 NCBI chrNW_004955413:29,709,473...29,765,043
Ensembl chrNW_004955413:29,709,473...29,765,043
JBrowse link
G Smc3 structural maintenance of chromosomes 3 ISO MMO:0000679 RGD PMID:10652260 RGD:1331378 NCBI chrNW_004955485:815,281...848,561 JBrowse link
G Stag3 STAG3 cohesin complex component located_in ISO (PMID:10698974) MGI PMID:10698974 NCBI chrNW_004955573:602,635...631,775
Ensembl chrNW_004955573:602,016...630,936
JBrowse link
G Syce1 synaptonemal complex central element protein 1 located_in ISO PMID:16968740 MGI PMID:16968740 RGD:8554354 NCBI chrNW_004955507:6,263,070...6,271,289
Ensembl chrNW_004955507:6,264,059...6,271,729
JBrowse link
G Sycp1 synaptonemal complex protein 1 located_in ISO (PMID:15937223)
(PMID:12815066), (PMID:16968740), (PMID:17696610), (PMID:18070917), (PMID:18316482), (PMID:20551173), (PMID:22011390), (PMID:25675407), (PMID:26358182), (PMID:26490168), (PMID:27473657), (PMID:27760146), (PMID:27856912), (PMID:30718482)
RGD
UniProt
MGI
PMID:8660935 PMID:12815066 PMID:15937223 PMID:16968740 PMID:17696610 More... RGD:8554354 RGD:9686370 NCBI chrNW_004955435:18,157,173...18,291,732 JBrowse link
G Sycp2 synaptonemal complex protein 2 located_in ISO (PMID:18316482), (PMID:26362258) RGD
MGI
PMID:9592139 PMID:18316482 PMID:26362258 RGD:69387 NCBI chrNW_004955528:3,809,438...3,887,055
Ensembl chrNW_004955528:3,809,438...3,886,312
JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in ISO (PMID:9774970)
(PMID:12815066), (PMID:14736746), (PMID:15657431), (PMID:16428451), (PMID:16968740), (PMID:17141210), (PMID:17696610), (PMID:17912366), (PMID:18070917), (PMID:20551173), (PMID:22854038), (PMID:23810942), (PMID:26358182), (PMID:26490168), (PMID:27473657), (PMID:27760146), (PMID:27856912), (PMID:30718482), (PMID:31839538)
MGI PMID:9774970 PMID:12815066 PMID:14736746 PMID:15657431 PMID:16428451 More... NCBI chrNW_004955405:37,093,330...37,102,789
Ensembl chrNW_004955405:37,093,652...37,102,856
JBrowse link
G Syn1 synapsin I located_in ISO (PMID:14736746) MGI PMID:14736746 NCBI chrNW_004955516:460,258...521,484
Ensembl chrNW_004955516:460,198...521,484
JBrowse link
G Tex11 testis expressed 11 located_in ISO (PMID:18369460) UniProt PMID:18369460 NCBI chrNW_004955475:10,057,708...10,432,087 JBrowse link
G Tex12 testis expressed 12 located_in ISO (PMID:16968740) MGI PMID:16968740 NCBI chrNW_004955412:13,829,637...13,834,481
Ensembl chrNW_004955412:13,831,353...13,834,481
JBrowse link
transverse filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stag3 STAG3 cohesin complex component located_in ISO (PMID:15870106) MGI PMID:15870106 NCBI chrNW_004955573:602,635...631,775
Ensembl chrNW_004955573:602,016...630,936
JBrowse link
G Sycp1 synaptonemal complex protein 1 located_in ISO (PMID:15870106), (PMID:18283110), (PMID:21539824), (PMID:22711701) MGI
RGD
PMID:1464329 PMID:15870106 PMID:18283110 PMID:21539824 PMID:22711701 RGD:729937 NCBI chrNW_004955435:18,157,173...18,291,732 JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in ISO (PMID:15870106) MGI PMID:15870106 NCBI chrNW_004955405:37,093,330...37,102,789
Ensembl chrNW_004955405:37,093,652...37,102,856
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12815
    cellular anatomical structure 12663
      organelle 10101
        membraneless organelle 3786
          intracellular membraneless organelle 3786
            chromosome 1056
              condensed chromosome 234
                Smc5-Smc6 complex 7
                condensed chromosome, centromeric region + 141
                condensed nuclear chromosome + 72
paths to the root