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ONTOLOGY REPORT - ANNOTATIONS


Term:mRNA splicing, via spliceosome
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Accession:GO:0000398 term browser browse the term
Definition:The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
Comment:Note that although the many U12-type introns have the sequence AT-AC at the intron termini, some introns with these terminal sequences are spliced by the U2-type spliceosome. The distinguishing characteristics are sequences near the 5' splice site and the branch point sequences of the intron. Note that although the majority of U2-type introns have the sequence GU-AG at the intron termini, some introns with these terminal sequences are spliced by the U12-type spliceosome. The distinguishing characteristics are sequences near the 5' splice site and the branch point sequences of the intron.
Synonyms:exact_synonym: nuclear mRNA splicing, via spliceosome
 narrow_synonym: nuclear mRNA splicing via U12-type spliceosome;   nuclear mRNA splicing via U2-type spliceosome
 broad_synonym: mRNA splicing;   pre-mRNA splicing
 related_synonym: splicing AT-AC intron;   splicing GT-AG intron
 alt_id: GO:0006374;   GO:0006375



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mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07037800.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr  X:29,333,112...29,334,044 JBrowse link
G AABR07042226.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr  X:144,806,986...144,812,552 JBrowse link
G AABR07048397.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:246,755,907...246,757,455 JBrowse link
G AC109707.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr14:43,128,814...43,130,403 JBrowse link
G AC126899.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr19:40,146,975...40,147,500 JBrowse link
G Aqr aquarius intron-binding spliceosomal factor involved_in ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 3:100,874,987...100,945,026
Ensembl chr 3:100,874,987...100,945,044
JBrowse link
G Bcas2 BCAS2, pre-mRNA processing factor involved_in ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 2:190,692,503...190,700,386
Ensembl chr 2:190,692,461...190,700,389
JBrowse link
G Bud13 BUD13 homolog involved_in ISO
IBA
IEA
ISS
(PMID:29360106)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:29360106 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:46,575,124...46,590,964
Ensembl chr 8:46,575,115...46,590,958
JBrowse link
G Bud31 BUD31 homolog involved_in ISO
IBA
(PMID:28076346)
GO_REF:0000033
RGD
GO_Central
PMID:28076346 GO_REF:0000033 NCBI chr12:9,462,838...9,470,387
Ensembl chr12:9,462,441...9,470,509
JBrowse link
G C3h9orf78 similar to human chromosome 9 open reading frame 78 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:14,264,262...14,272,552
Ensembl chr 3:14,264,083...14,272,764
JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:28062851) RGD PMID:28062851 NCBI chr 7:8,391,396...8,397,219
Ensembl chr 7:8,391,397...8,396,829
JBrowse link
G Casc3 CASC3 exon junction complex subunit involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:29301961)
UniProt
Ensembl
RGD
PMID:29301961 GO_REF:0000024 GO_REF:0000107 NCBI chr10:83,769,014...83,788,966
Ensembl chr10:83,769,001...83,788,966
JBrowse link
G Cdc40 cell division cycle 40 involved_in ISO
IBA
(PMID:28076346), (PMID:33220177)
GO_REF:0000033
RGD
GO_Central
PMID:28076346 PMID:33220177 GO_REF:0000033 NCBI chr20:44,273,080...44,325,605
Ensembl chr20:44,273,089...44,325,358
JBrowse link
G Cdc5l cell division cycle 5-like involved_in ISO
IBA
IEA
ISS
(PMID:28076346)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
GO_REF:0000024
RGD
GO_Central
Ensembl
InterPro
UniProt
PMID:28076346 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:15,564,949...15,603,453
Ensembl chr 9:15,564,767...15,603,450
JBrowse link
G Cenatac centrosomal AT-AC splicing factor involved_in ISO (PMID:34009673) RGD PMID:34009673 NCBI chr 8:44,735,968...44,742,859
Ensembl chr 8:44,735,972...44,742,837
JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 involved_in ISO
IBA
IEA
ISS
(PMID:28076346)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000024
RGD
GO_Central
InterPro
UniProt
PMID:28076346 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:133,338,593...133,354,329
Ensembl chr 3:133,337,039...133,354,302
Ensembl chr 6:133,337,039...133,354,302
JBrowse link
G Cwc15 CWC15 spliceosome-associated protein involved_in ISS
ISO
GO_REF:0000024
(PMID:28076346)
UniProt
RGD
PMID:28076346 GO_REF:0000024 NCBI chr 8:11,305,401...11,316,326
Ensembl chr 8:11,305,424...11,316,325
JBrowse link
G Cwc22 CWC22 spliceosome associated protein involved_in ISO
IBA
(PMID:29360106)
GO_REF:0000033
RGD
GO_Central
PMID:29360106 GO_REF:0000033 NCBI chr 3:62,815,230...62,864,269
Ensembl chr 3:62,802,045...62,864,228
JBrowse link
G Cwc25 CWC25 spliceosome-associated protein homolog involved_in ISO
IBA
(PMID:29301961)
GO_REF:0000033
RGD
GO_Central
PMID:29301961 GO_REF:0000033 NCBI chr10:82,735,698...82,760,373
Ensembl chr10:82,736,995...82,760,354
JBrowse link
G Cwf19l1 CWF19 like cell cycle control factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:242,997,720...243,020,989
Ensembl chr 1:242,997,726...243,020,961
JBrowse link
G Cwf19l2 CWF19 like cell cycle control factor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:290,148...356,636
Ensembl chr 6:281,685...356,604
JBrowse link
G Dbr1 debranching RNA lariats 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:10982890)
GO_Central
RGD
PMID:10982890 GO_REF:0000033 NCBI chr 8:100,139,039...100,150,768
Ensembl chr 8:100,139,034...100,151,030
JBrowse link
G Ddx23 DEAD-box helicase 23 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:129,797,620...129,814,909
Ensembl chr 7:129,797,614...129,814,949
JBrowse link
G Ddx39a DExD-box helicase 39A involved_in ISO
IBA
IEA
UniProtKB:Q07478 (PMID:15047853)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:15047853 GO_REF:0000033 GO_REF:0000107 NCBI chr19:24,418,743...24,427,422
Ensembl chr19:24,418,114...24,426,954
JBrowse link
G Ddx39b DExD-box helicase 39B involved_in ISO
IBA
UniProtKB:Q07478 (PMID:15047853)
GO_REF:0000033
RGD
GO_Central
PMID:15047853 GO_REF:0000033 NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996
JBrowse link
G Ddx41 DEAD-box helicase 41 involved_in ISO
IBA
(PMID:25920683)
GO_REF:0000033
RGD
GO_Central
PMID:25920683 GO_REF:0000033 NCBI chr17:9,102,926...9,108,415
Ensembl chr17:9,103,010...9,108,415
JBrowse link
G Ddx41l1 DEAD-box helicase 41 like 1 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 6:107,185,923...107,187,961
Ensembl chr 6:107,186,096...107,187,961
JBrowse link
G Ddx46 DEAD-box helicase 46 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:32494006), (PMID:34822310), (PMID:36797247)
UniProt
GO_Central
RGD
PMID:32494006 PMID:34822310 PMID:36797247 GO_REF:0000024 GO_REF:0000033 NCBI chr17:8,942,070...8,988,440
Ensembl chr17:8,944,454...8,988,439
JBrowse link
G Dhx16 DEAH-box helicase 16 involved_in ISO (PMID:20423332), (PMID:25296192), (PMID:29360106) RGD PMID:20423332 PMID:25296192 PMID:29360106 NCBI chr20:2,862,000...2,874,991
Ensembl chr20:2,862,000...2,874,948
JBrowse link
G Dhx38 DEAH-box helicase 38 involved_in ISO
IBA
(PMID:9524131)
GO_REF:0000033
RGD
GO_Central
PMID:9524131 GO_REF:0000033 NCBI chr19:37,512,893...37,530,135
Ensembl chr19:37,512,891...37,530,140
JBrowse link
G Dhx8 DEAH-box helicase 8 involved_in ISO
IBA
(PMID:28076346)
GO_REF:0000033
RGD
GO_Central
PMID:28076346 GO_REF:0000033 NCBI chr10:86,667,641...86,704,198
Ensembl chr10:86,667,834...86,705,137
JBrowse link
G Eftud2 elongation factor Tu GTP binding domain containing 2 involved_in ISO
IBA
(PMID:28076346)
GO_REF:0000033
RGD
GO_Central
PMID:28076346 GO_REF:0000033 NCBI chr10:87,804,893...87,852,181
Ensembl chr10:87,804,892...87,846,079
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:29301961)
UniProt
GO_Central
RGD
PMID:29301961 GO_REF:0000024 GO_REF:0000033 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057
JBrowse link
G ENSRNOG00000063412 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr  X:133,163,165...133,163,784 JBrowse link
G ENSRNOG00000065450 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr18:73,476,936...73,477,748 JBrowse link
G ENSRNOG00000069332 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 2:89,339,501...89,339,701 JBrowse link
G Ess2 ess-2 splicing factor homolog involved_in ISO (PMID:34694367) RGD PMID:34694367 NCBI chr11:83,075,893...83,085,849
Ensembl chr11:83,075,925...83,084,846
JBrowse link
G Fra10ac1 FRA10A associated CGG repeat 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:34694367)
UniProt
Ensembl
RGD
PMID:34694367 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:235,969,071...236,001,074
Ensembl chr 1:235,969,112...236,001,210
JBrowse link
G Gcfc2 GC-rich sequence DNA-binding factor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:114,481,613...114,519,268
Ensembl chr 4:114,481,607...114,519,962
JBrowse link
G Gpkow G patch domain and KOW motifs involved_in ISO
IBA
(PMID:25296192)
GO_REF:0000033
RGD
GO_Central
PMID:25296192 GO_REF:0000033 NCBI chr  X:14,791,601...14,806,384
Ensembl chr  X:14,791,610...14,806,384
JBrowse link
G Hars2 histidyl-tRNA synthetase 2, mitochondrial involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:28,398,790...28,408,075
Ensembl chr18:28,398,795...28,414,747
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:26321680)
UniProt
GO_Central
Ensembl
RGD
PMID:26321680 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249
JBrowse link
G Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:60,578,574...60,588,755
Ensembl chr 3:60,578,673...60,588,306
JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO
ISS
(PMID:25719671)
GO_REF:0000024
RGD
UniProt
PMID:25719671 GO_REF:0000024 NCBI chr15:24,779,593...24,809,213
Ensembl chr15:24,779,450...24,809,183
JBrowse link
G Htatsf1 HIV-1 Tat specific factor 1 involved_in ISO (PMID:32494006), (PMID:34822310), (PMID:36797247) RGD PMID:32494006 PMID:34822310 PMID:36797247 NCBI chr  X:134,935,426...134,949,607
Ensembl chr  X:134,935,426...134,949,607
JBrowse link
G Ik IK cytokine involved_in ISO
IBA
ISS
(PMID:28781166)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:28781166 GO_REF:0000024 GO_REF:0000033 NCBI chr18:28,358,004...28,372,809
Ensembl chr18:28,357,977...28,378,832
JBrowse link
G Isy1 ISY1 splicing factor homolog involved_in ISO
ISS
(PMID:29301961)
GO_REF:0000024
RGD
UniProt
PMID:29301961 GO_REF:0000024 NCBI chr 4:120,276,535...120,297,227
Ensembl chr 4:120,276,292...120,297,188
JBrowse link
G LOC100912568 probable ATP-dependent RNA helicase DDX41-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:107,230,038...107,231,786
Ensembl chr 6:107,226,563...107,244,212
JBrowse link
G LOC102548514 crooked neck-like protein 1-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 6:1,140,615...1,142,918 JBrowse link
G LOC120096281 heterogeneous nuclear ribonucleoprotein A3-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:65,940,732...65,942,250
Ensembl chr13:65,941,100...65,942,227
JBrowse link
G LOC134479418 pre-mRNA-splicing factor CWC22 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134479419 pre-mRNA-splicing factor CWC22 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in ISO
IBA
(PMID:28781166)
GO_REF:0000033
RGD
GO_Central
PMID:28781166 GO_REF:0000033 NCBI chr20:3,843,467...3,847,217
Ensembl chr20:3,843,466...3,847,266
JBrowse link
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:28781166)
GO_REF:0000033
(PMID:10369684), (PMID:10523320)
RGD
GO_Central
PMID:10369684 PMID:10523320 PMID:28781166 GO_REF:0000033 NCBI chr 4:124,021,023...124,027,269
Ensembl chr 4:124,021,023...124,027,269
JBrowse link
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in ISO (PMID:28781166) RGD PMID:28781166 NCBI chr16:18,755,481...18,761,106
Ensembl chr16:18,755,484...18,760,926
JBrowse link
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in ISO
IBA
(PMID:28781166)
GO_REF:0000033
RGD
GO_Central
PMID:28781166 GO_REF:0000033 NCBI chr 4:85,951,073...85,954,289
Ensembl chr 6:104,652,477...104,654,165
Ensembl chr 4:104,652,477...104,654,165
JBrowse link
G Lsm5l1 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:1,339,769...1,340,198
Ensembl chr16:1,339,784...1,340,056
JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in ISO
IBA
(PMID:28781166)
GO_REF:0000033
RGD
GO_Central
PMID:28781166 GO_REF:0000033 NCBI chr19:29,098,254...29,112,858
Ensembl chr13:42,114,032...42,116,484
Ensembl chr19:42,114,032...42,116,484
JBrowse link
G Lsm6l1 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:42,114,013...42,116,559
Ensembl chr13:42,114,032...42,116,484
JBrowse link
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 7:8,856,698...8,859,113
Ensembl chr 7:8,856,489...8,859,119
JBrowse link
G Lsm8 LSM8 homolog, U6 small nuclear RNA associated involved_in ISO
IBA
(PMID:28781166)
GO_REF:0000033
RGD
GO_Central
PMID:28781166 GO_REF:0000033 NCBI chr 4:47,306,259...47,312,125
Ensembl chr 4:47,306,295...47,314,293
JBrowse link
G Magohb mago homolog B, exon junction complex subunit involved_in ISO (PMID:28502770) RGD PMID:28502770 NCBI chr 4:165,034,131...165,041,977
Ensembl chr 4:165,034,122...165,041,967
JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in ISO (PMID:25719671) RGD PMID:25719671 NCBI chr 2:211,530,598...211,546,845
Ensembl chr 2:211,530,602...211,546,821
JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in
NOT|involved_in
ISO (PMID:25719671), (PMID:26321680)
(PMID:25569111)
(PMID:28637692)
RGD PMID:25569111 PMID:25719671 PMID:26321680 PMID:28637692 NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041
JBrowse link
G Mfap1a microfibrillar-associated protein 1A involved_in ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 3:108,440,163...108,456,744
Ensembl chr 3:108,438,845...108,456,750
JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:68,821,026...68,829,863
Ensembl chr11:68,817,740...68,851,885
JBrowse link
G Nhp2 NHP2 ribonucleoprotein involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:35,877,057...35,880,399
Ensembl chr10:35,877,054...35,882,545
JBrowse link
G Nova1 NOVA alternative splicing regulator 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:2386947 (PMID:10719891)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:10719891 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:63,780,105...63,905,567
Ensembl chr 6:63,783,489...63,906,289
JBrowse link
G Nova2 NOVA alternative splicing regulator 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:78,572,253...78,613,703
Ensembl chr 1:78,572,279...78,608,021
JBrowse link
G Paxbp1 PAX3 and PAX7 binding protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:30,272,037...30,301,504
Ensembl chr11:30,272,037...30,301,648
JBrowse link
G Phf5a PHD finger protein 5A involved_in ISS
IBA
ISO
IEA
GO_REF:0000024
GO_REF:0000033
(PMID:12234937), (PMID:27720643), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
GO_REF:0000002
UniProt
GO_Central
RGD
InterPro
PMID:12234937 PMID:27720643 PMID:29360106 PMID:32494006 PMID:34822310 More... GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:113,378,469...113,385,035
Ensembl chr 7:113,378,471...113,385,460
JBrowse link
G Plrg1 pleiotropic regulator 1 involved_in ISO
IBA
IEA
ISS
(PMID:28076346)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
GO_REF:0000024
RGD
GO_Central
Ensembl
InterPro
UniProt
PMID:28076346 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:168,408,139...168,424,470
Ensembl chr 2:168,408,124...168,424,522
JBrowse link
G Ppie peptidylprolyl isomerase E involved_in ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 5:135,406,172...135,419,332
Ensembl chr 5:135,406,176...135,419,235
JBrowse link
G Ppil1 peptidylprolyl isomerase like 1 involved_in ISO
IBA
(PMID:28076346), (PMID:33220177)
GO_REF:0000033
RGD
GO_Central
PMID:28076346 PMID:33220177 GO_REF:0000033 NCBI chr20:7,302,292...7,322,349
Ensembl chr20:7,302,621...7,322,354
JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in ISO
IBA
IEA
ISS
(PMID:20176811)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000024
RGD
GO_Central
InterPro
UniProt
PMID:20176811 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662
JBrowse link
G Prpf3 pre-mRNA processing factor 3 involved_in ISO
IBA
(PMID:28781166)
GO_REF:0000033
RGD
GO_Central
PMID:28781166 GO_REF:0000033 NCBI chr 2:183,379,041...183,403,526
Ensembl chr 2:183,378,718...183,403,489
JBrowse link
G Prpf31 pre-mRNA processing factor 31 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:28781166)
GO_REF:0000033
(PMID:11867543)
RGD
GO_Central
PMID:11867543 PMID:28781166 GO_REF:0000033 NCBI chr 1:65,575,887...65,587,561
Ensembl chr 1:65,575,887...65,587,873
JBrowse link
G Prpf38a pre-mRNA processing factor 38A involved_in ISO (PMID:26673105), (PMID:28781166) RGD PMID:26673105 PMID:28781166 NCBI chr 5:123,312,461...123,324,160
Ensembl chr 5:123,311,482...123,323,972
JBrowse link
G Prpf38b pre-mRNA processing factor 38B involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:196,553,224...196,562,271
Ensembl chr 2:196,553,225...196,562,250
JBrowse link
G Prpf4 pre-mRNA splicing tri-snRNP complex factor 4 involved_in ISO
IBA
(PMID:28781166)
GO_REF:0000033
RGD
GO_Central
PMID:28781166 GO_REF:0000033 NCBI chr 5:75,859,934...75,873,924
Ensembl chr 5:75,859,924...75,873,919
JBrowse link
G Prpf40a pre-mRNA processing factor 40 homolog A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:37,625,585...37,689,859
Ensembl chr 3:37,627,690...37,690,886
JBrowse link
G Prpf40b pre-mRNA processing factor 40 homolog B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:130,392,611...130,454,053
Ensembl chr 7:130,432,112...130,454,052
JBrowse link
G Prpf6 pre-mRNA processing factor 6 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000002
(PMID:21549338), (PMID:28781166)
UniProt
GO_Central
InterPro
RGD
PMID:21549338 PMID:28781166 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:168,706,952...168,771,191
Ensembl chr 3:168,704,299...168,774,991
JBrowse link
G Prpf8 pre-mRNA processing factor 8 involved_in ISO (PMID:28781166), (PMID:29301961) RGD PMID:28781166 PMID:29301961 NCBI chr10:60,331,494...60,354,606
Ensembl chr10:60,331,494...60,354,606
JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575
JBrowse link
G Rbm14 RNA binding motif protein 14 involved_in ISO
IBA
(PMID:31794640)
GO_REF:0000033
RGD
GO_Central
PMID:31794640 GO_REF:0000033 NCBI chr 1:202,076,940...202,105,688
Ensembl chr 1:202,078,287...202,105,665
JBrowse link
G Rbm41 RNA binding motif protein 41 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:103,605,732...103,660,381
Ensembl chr  X:103,608,585...103,660,381
JBrowse link
G Rbm44 RNA binding motif protein 44 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:91,731,153...91,756,783
Ensembl chr 9:91,731,115...91,756,772
JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:202,047,934...202,058,025
Ensembl chr 1:202,047,927...202,058,020
JBrowse link
G Rbm5 RNA binding motif protein 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:108,420,220...108,449,481
Ensembl chr 8:108,420,222...108,449,430
JBrowse link
G Rbm6 RNA binding motif protein 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:108,452,687...108,552,783
Ensembl chr 8:108,452,687...108,552,771
JBrowse link
G Rbm8a RNA binding motif protein 8A involved_in ISS
ISO
GO_REF:0000024
(PMID:29301961)
UniProt
RGD
PMID:29301961 GO_REF:0000024 NCBI chr 2:184,165,189...184,167,959
Ensembl chr 2:184,165,193...184,167,959
JBrowse link
G Rbmx2 RNA binding motif protein, X-linked 2 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000002
(PMID:29360106)
UniProt
GO_Central
InterPro
RGD
PMID:29360106 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr  X:127,888,514...127,896,239
Ensembl chr  X:127,888,438...127,896,869
JBrowse link
G Rnf113a1 ring finger protein 113A1 involved_in ISO (PMID:29360106) RGD PMID:29360106 NCBI chr  X:116,427,941...116,429,164
Ensembl chr  X:116,427,684...116,433,762
JBrowse link
G Rnpc3 RNA-binding region (RNP1, RRM) containing 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:201,432,769...201,457,015
Ensembl chr 2:201,432,684...201,456,747
JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,445,516...13,455,858
Ensembl chr10:13,445,653...13,455,858
JBrowse link
G Rsrc1 arginine and serine rich coiled-coil 1 involved_in ISO
ISS
(PMID:15798186)
GO_REF:0000024
RGD
UniProt
PMID:15798186 GO_REF:0000024 NCBI chr 2:151,226,821...151,632,771
Ensembl chr 2:151,231,156...151,632,765
JBrowse link
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP involved_in ISO
IEA
(PMID:28781166)
GO_REF:0000002
RGD
InterPro
PMID:28781166 GO_REF:0000002 NCBI chr 1:202,690,472...202,699,136
Ensembl chr 1:202,690,459...202,699,136
JBrowse link
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein involved_in ISO
IBA
(PMID:15314151)
GO_REF:0000033
RGD
GO_Central
PMID:15314151 GO_REF:0000033 NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
JBrowse link
G Sf1 splicing factor 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:203,670,016...203,683,432
Ensembl chr 1:203,670,018...203,684,330
JBrowse link
G Sf3a1 splicing factor 3A subunit 1 involved_in ISO (PMID:10882114), (PMID:29360106), (PMID:32494006), (PMID:36797247) RGD PMID:10882114 PMID:29360106 PMID:32494006 PMID:36797247 NCBI chr14:79,031,394...79,052,144
Ensembl chr14:79,031,394...79,052,144
JBrowse link
G Sf3a2 splicing factor 3A subunit 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
UniProt
RGD
PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247 GO_REF:0000024 NCBI chr 7:8,909,507...8,916,104
Ensembl chr 7:8,909,507...8,915,530
JBrowse link
G Sf3a3 splicing factor 3a, subunit 3 involved_in ISO
IBA
(PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
GO_REF:0000033
RGD
GO_Central
PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247 GO_REF:0000033 NCBI chr 5:136,967,713...136,987,345
Ensembl chr 5:136,967,691...136,987,361
JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 acts_upstream_of_or_within
involved_in
ISO (PMID:11252167)
(PMID:23211737)
(PMID:27720643), (PMID:28781166), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
RGD PMID:11252167 PMID:23211737 PMID:27720643 PMID:28781166 PMID:29360106 More... NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300
JBrowse link
G Sf3b2 splicing factor 3b, subunit 2 involved_in ISO
IBA
(PMID:27720643), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
GO_REF:0000033
RGD
GO_Central
PMID:27720643 PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247 GO_REF:0000033 NCBI chr 1:202,570,423...202,590,774
Ensembl chr 1:202,570,423...202,590,759
JBrowse link
G Sf3b3 splicing factor 3b, subunit 3 involved_in ISO
IBA
(PMID:27720643), (PMID:28781166), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
GO_REF:0000033
RGD
GO_Central
PMID:27720643 PMID:28781166 PMID:29360106 PMID:32494006 PMID:34822310 More... GO_REF:0000033 NCBI chr19:38,782,749...38,820,271
Ensembl chr19:38,783,040...38,820,245
JBrowse link
G Sf3b4 splicing factor 3B subunit 4 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
ISS
GO_REF:0000107
GO_REF:0000033
(PMID:23636947)
(PMID:27720643), (PMID:29360106), (PMID:32494006), (PMID:36797247)
GO_REF:0000024
Ensembl
GO_Central
RGD
UniProt
PMID:23636947 PMID:27720643 PMID:29360106 PMID:32494006 PMID:36797247 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:183,732,791...183,737,545
Ensembl chr 2:183,732,754...183,737,959
JBrowse link
G Sf3b5 splicing factor 3b, subunit 5 involved_in ISO
IBA
(PMID:27720643), (PMID:28781166), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
GO_REF:0000033
RGD
GO_Central
PMID:27720643 PMID:28781166 PMID:29360106 PMID:32494006 PMID:34822310 More... GO_REF:0000033 NCBI chr 1:7,357,040...7,357,752
Ensembl chr 1:7,350,731...7,357,839
JBrowse link
G Sf3b6 splicing factor 3B, subunit 6 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:27720643), (PMID:32494006), (PMID:34822310)
GO_REF:0000033
(PMID:23211737)
RGD
GO_Central
PMID:23211737 PMID:27720643 PMID:32494006 PMID:34822310 GO_REF:0000033 NCBI chr 6:27,826,044...27,835,086
Ensembl chr 6:27,826,029...27,835,156
JBrowse link
G Slu7 SLU7 homolog, splicing factor involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:27,908,325...27,923,784
Ensembl chr10:27,908,396...27,923,349
JBrowse link
G Smu1 SMU1, DNA replication regulator and spliceosomal factor involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000002
GO_REF:0000107
(PMID:28781166)
UniProt
InterPro
Ensembl
RGD
PMID:28781166 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:55,856,691...55,875,262
Ensembl chr 5:55,856,246...55,875,300
JBrowse link
G Snip1 Smad nuclear interacting protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:29360106)
UniProt
RGD
PMID:29360106 GO_REF:0000024 NCBI chr 5:137,328,371...137,335,846
Ensembl chr 5:137,328,371...137,335,845
JBrowse link
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 involved_in ISS
ISO
GO_REF:0000024
(PMID:29301961), (PMID:8670905)
UniProt
RGD
PMID:8670905 PMID:29301961 GO_REF:0000024 NCBI chr 3:114,428,854...114,458,194
Ensembl chr 3:114,428,854...114,458,182
JBrowse link
G Snrnp25 small nuclear ribonucleoprotein U11/U12 subunit 25 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,420,482...15,423,806
Ensembl chr10:15,420,486...15,423,804
JBrowse link
G Snrnp35 small nuclear ribonucleoprotein U11/U12 subunit 35 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:32,112,032...32,119,829
Ensembl chr12:32,110,993...32,122,660
JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 involved_in ISO
IBA
ISS
(PMID:9531537)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:9531537 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:95,856,038...95,876,434
Ensembl chr 1:95,856,036...95,876,392
JBrowse link
G Snrpa small nuclear ribonucleoprotein polypeptide A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:82,481,770...82,490,540
Ensembl chr 1:82,481,770...82,490,538
JBrowse link
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' involved_in ISO
IBA
(PMID:28076346), (PMID:28781166), (PMID:32494006), (PMID:36797247)
GO_REF:0000033
RGD
GO_Central
PMID:28076346 PMID:28781166 PMID:32494006 PMID:36797247 GO_REF:0000033 NCBI chr 1:119,641,402...119,654,653
Ensembl chr 1:119,638,481...119,654,653
JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:28076346), (PMID:28781166), (PMID:32494006), (PMID:36797247)
UniProt
GO_Central
RGD
PMID:28076346 PMID:28781166 PMID:32494006 PMID:36797247 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339
JBrowse link
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 involved_in ISO
IBA
(PMID:28076346), (PMID:28781166), (PMID:32494006), (PMID:36797247)
GO_REF:0000033
RGD
GO_Central
PMID:28076346 PMID:28781166 PMID:32494006 PMID:36797247 GO_REF:0000033 NCBI chr 3:130,399,239...130,408,821
Ensembl chr 3:130,399,248...130,408,812
JBrowse link
G Snrpc small nuclear ribonucleoprotein polypeptide C involved_in ISO (PMID:8972845) RGD PMID:8972845 NCBI chr20:5,888,453...5,906,638
Ensembl chr20:5,888,453...5,906,638
JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide involved_in ISO (PMID:28076346), (PMID:32494006), (PMID:36797247) RGD PMID:28076346 PMID:32494006 PMID:36797247 NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256
JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide involved_in ISO (PMID:28076346), (PMID:32494006), (PMID:36797247) RGD PMID:28076346 PMID:32494006 PMID:36797247 NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351
JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide involved_in ISO (PMID:28076346), (PMID:32494006), (PMID:36797247) RGD PMID:28076346 PMID:32494006 PMID:36797247 NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978
JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E involved_in ISO (PMID:28076346), (PMID:32494006), (PMID:36797247) RGD PMID:28076346 PMID:32494006 PMID:36797247 NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310
Ensembl chr 8:45,050,986...45,057,310
JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F involved_in ISO
IBA
(PMID:28076346), (PMID:32494006), (PMID:36797247)
GO_REF:0000033
RGD
GO_Central
PMID:28076346 PMID:32494006 PMID:36797247 GO_REF:0000033 NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129
JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G involved_in ISO
IBA
(PMID:28076346), (PMID:32494006), (PMID:36797247)
GO_REF:0000033
RGD
GO_Central
PMID:28076346 PMID:32494006 PMID:36797247 GO_REF:0000033 NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826
JBrowse link
G Snrpgl1 small nuclear ribonucleoprotein polypeptide G like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118
Ensembl chr 4:87,982,626...87,983,118
JBrowse link
G Snrpn small nuclear ribonucleoprotein polypeptide N involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:111,101,327...111,123,400
Ensembl chr 1:111,101,329...111,123,634
JBrowse link
G Snu13 small nuclear ribonucleoprotein 13 involved_in ISO
IBA
ISS
(PMID:28781166)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:28781166 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:113,565,293...113,570,887
Ensembl chr 7:113,565,295...113,570,872
Ensembl chr 1:113,565,295...113,570,872
JBrowse link
G Snu13l1 small nuclear ribonucleoprotein 13 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:150,624,087...150,624,525
Ensembl chr  X:150,624,087...150,624,473
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:15194481), (PMID:28076346) RGD PMID:15194481 PMID:28076346 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536
JBrowse link
G Srrm2 serine/arginine repetitive matrix 2 involved_in ISO (PMID:28076346) RGD PMID:28076346 NCBI chr10:12,815,471...12,848,750
Ensembl chr10:12,815,471...12,848,751
JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 involved_in ISO
IBA
(PMID:9774382)
GO_REF:0000033
RGD
GO_Central
PMID:9774382 GO_REF:0000033 NCBI chr 5:148,088,759...148,102,964
Ensembl chr 5:148,088,823...148,101,768
JBrowse link
G Srsf12 serine and arginine rich splicing factor 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:47,606,526...47,631,509
Ensembl chr 5:47,606,285...47,629,778
JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:100,605,165...100,610,192
Ensembl chr 6:100,605,456...100,610,177
JBrowse link
G Syf2 SYF2 pre-mRNA-splicing factor involved_in ISO
ISS
(PMID:28076346)
GO_REF:0000024
RGD
UniProt
PMID:28076346 GO_REF:0000024 NCBI chr 5:147,156,492...147,164,416
Ensembl chr 5:147,156,480...147,164,414
JBrowse link
G Tra2a transformer 2 alpha involved_in ISO (PMID:9546399) RGD PMID:9546399 NCBI chr 4:78,220,838...78,239,737
Ensembl chr 4:78,220,883...78,239,712
JBrowse link
G Tra2b transformer 2 beta involved_in
acts_upstream_of
ISO
IEA
ISS
(PMID:9546399)
MGI:2176173|MGI:4450919 (PMID:22194695)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:9546399 PMID:22194695 GO_REF:0000024 GO_REF:0000107 NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249
JBrowse link
G Txnl4a thioredoxin-like 4A involved_in ISO (PMID:28781166) RGD PMID:28781166 NCBI chr18:73,659,107...73,674,893
Ensembl chr18:73,659,107...73,674,893
JBrowse link
G Txnl4b thioredoxin-like 4B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:37,530,157...37,539,827
Ensembl chr19:37,530,152...37,538,521
JBrowse link
G U2af1 U2 small nuclear RNA auxiliary factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:9,742,904...9,753,840
Ensembl chr20:9,742,905...9,753,832
JBrowse link
G U2af1l4 U2 small nuclear RNA auxiliary factor 1-like 4 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 1:85,816,268...85,818,462
Ensembl chr 1:85,815,101...85,818,462
JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 involved_in ISO (PMID:1824937) RGD PMID:1824937 NCBI chr 1:68,760,911...68,779,730
Ensembl chr 1:68,760,924...68,778,492
JBrowse link
G Ubl5 ubiquitin-like 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:19,181,504...19,185,224
Ensembl chr 8:19,181,615...19,185,217
JBrowse link
G Usp39 ubiquitin specific peptidase 39 involved_in ISO (PMID:11350945) RGD PMID:11350945 NCBI chr 4:104,373,948...104,406,359
Ensembl chr 4:104,373,955...104,406,359
JBrowse link
G Usp49 ubiquitin specific peptidase 49 involved_in ISO (PMID:23824326) RGD PMID:23824326 NCBI chr 9:13,305,640...13,366,132
Ensembl chr 9:13,308,178...13,366,132
JBrowse link
G Wbp4 WW domain binding protein 4 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000002
(PMID:28781166)
UniProt
InterPro
RGD
PMID:28781166 GO_REF:0000002 GO_REF:0000024 NCBI chr15:54,862,700...54,890,668
Ensembl chr15:54,862,843...54,890,647
JBrowse link
G Wdr83 WD repeat domain 83 involved_in ISO
IBA
IEA
(PMID:11991638)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:11991638 GO_REF:0000033 GO_REF:0000107 NCBI chr19:23,076,948...23,082,569
Ensembl chr19:23,077,010...23,082,563
JBrowse link
G Xab2 XPA binding protein 2 involved_in ISO
IBA
IEA
ISS
(PMID:28076346)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
InterPro
Ensembl
UniProt
PMID:28076346 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr12:1,667,672...1,679,702
Ensembl chr12:1,667,672...1,679,692
JBrowse link
G Yju2b YJU2 splicing factor homolog B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:23,894,587...23,906,084
Ensembl chr19:23,894,649...23,906,077
JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:10564280 GO_REF:0000033, RGD:634512 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
JBrowse link
G Zcrb1 zinc finger CCHC-type and RNA binding motif containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:124,525,227...124,538,564
Ensembl chr 7:124,524,870...124,571,261
JBrowse link
G Zmat2 zinc finger, matrin type 2 involved_in ISO
IBA
(PMID:28781166)
GO_REF:0000033
RGD
GO_Central
PMID:28781166 GO_REF:0000033 NCBI chr18:28,409,606...28,414,241
Ensembl chr18:28,398,795...28,414,747
JBrowse link
G Zrsr2 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 involved_in ISO
IBA
IGI
(PMID:9237760)
GO_REF:0000033
RGD
GO_Central
PMID:9237760 PMID:33691379 GO_REF:0000033, RGD:151232289 NCBI chr  X:30,547,424...30,571,613
Ensembl chr  X:30,547,536...30,570,125
JBrowse link
G Zrsr2-ps1 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2, pseudogene 1 involved_in IBA
ISO
GO_REF:0000033
(PMID:29617656)
GO_Central
RGD
PMID:29617656 GO_REF:0000033 NCBI chr14:96,972,651...96,978,364
Ensembl chr14:96,972,580...96,978,891
JBrowse link
alternative mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07001435.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 1:43,640,876...43,641,875 JBrowse link
G AABR07056845.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 7:37,066,520...37,067,514 JBrowse link
G Bcas2 BCAS2, pre-mRNA processing factor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:34972250)
GO_REF:0000107
RGD
Ensembl
PMID:34972250 GO_REF:0000107 NCBI chr 2:190,692,503...190,700,386
Ensembl chr 2:190,692,461...190,700,389
JBrowse link
G Cdk13 cyclin-dependent kinase 13 involved_in ISO (PMID:17261272) RGD PMID:17261272 NCBI chr17:47,251,145...47,344,675
Ensembl chr17:47,251,163...47,341,721
JBrowse link
G Celf4 CUGBP, Elav-like family member 4 acts_upstream_of_or_within ISO (PMID:19720736) RGD PMID:19720736 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
JBrowse link
G Ddx17 DEAD-box helicase 17 involved_in ISO
IBA
(PMID:24275493), (PMID:24910439)
(PMID:24910439)
GO_REF:0000033
RGD
GO_Central
PMID:24275493 PMID:24910439 GO_REF:0000033 NCBI chr 7:111,091,127...111,109,353
Ensembl chr 7:111,089,445...111,109,193
JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO
IBA
(PMID:24275493), (PMID:24910439)
(PMID:24910439)
GO_REF:0000033
RGD
GO_Central
PMID:24275493 PMID:24910439 GO_REF:0000033 NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:28221134) RGD PMID:28221134 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Esrp1 epithelial splicing regulatory protein 1 acts_upstream_of_or_within ISO MGI:1924661 (PMID:26371508) RGD PMID:26371508 NCBI chr 5:24,427,611...24,482,157
Ensembl chr 5:24,428,717...24,482,062
JBrowse link
G Esrp2 epithelial splicing regulatory protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1917326 (PMID:26371508)
Ensembl
RGD
PMID:26371508 GO_REF:0000107 NCBI chr19:34,034,559...34,041,726
Ensembl chr19:34,034,559...34,041,726
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 acts_upstream_of_or_within ISO (PMID:15798186) RGD PMID:15798186 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M involved_in ISO (PMID:19874820) RGD PMID:19874820 NCBI chr 7:14,438,703...14,476,781
Ensembl chr 7:14,438,688...14,476,762
JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 acts_upstream_of_or_within ISO MGI:3052922 (PMID:19075228), (PMID:19720736) RGD PMID:19075228 PMID:19720736 NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368
JBrowse link
G Pqbp1 polyglutamine binding protein 1 involved_in ISO
IBA
ISS
(PMID:23512658)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:23512658 GO_REF:0000024 GO_REF:0000033 NCBI chr  X:14,603,516...14,608,091
Ensembl chr  X:14,603,539...14,608,087
JBrowse link
G Puf60 poly-U binding splicing factor 60 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:107,782,799...107,793,759
Ensembl chr 7:107,782,770...107,794,531
JBrowse link
G Rbm17 RNA binding motif protein 17 involved_in ISO
IBA
(PMID:17589525)
GO_REF:0000033
RGD
GO_Central
PMID:17589525 GO_REF:0000033 NCBI chr17:66,937,140...66,954,034
Ensembl chr17:66,937,140...66,954,014
JBrowse link
G Rsrc1 arginine and serine rich coiled-coil 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000002
(PMID:15798186)
GO_REF:0000033
InterPro
RGD
GO_Central
PMID:15798186 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:151,226,821...151,632,771
Ensembl chr 2:151,231,156...151,632,765
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO
IBA
(PMID:19874820)
GO_REF:0000033
RGD
GO_Central
PMID:19874820 GO_REF:0000033 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472
JBrowse link
G Sfswap splicing factor SWAP involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:8940107)
Ensembl
RGD
PMID:8940107 GO_REF:0000107 NCBI chr12:27,109,607...27,179,941
Ensembl chr12:27,109,611...27,179,884
JBrowse link
G Slu7 SLU7 homolog, splicing factor involved_in ISO
ISS
(PMID:15728250)
PMID:15181151
RGD PMID:15728250 PMID:15181151 RGD:1304333 NCBI chr10:27,908,325...27,923,784
Ensembl chr10:27,908,396...27,923,349
JBrowse link
G Smptb polypyrimidine tract-binding protein IDA RGD PMID:12578833 RGD:1299129 NCBI chr  X:16,609,016...16,610,898
Ensembl chr  X:16,606,597...16,610,874
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 involved_in IMP
IBA
ISO
GO_REF:0000033
(PMID:8940107)
GO_Central
RGD
PMID:8940107 PMID:23462647 GO_REF:0000033, RGD:11038736 NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336
JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:22767602)
UniProt
RGD
PMID:22767602 GO_REF:0000024 NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
JBrowse link
G Srsf9 serine and arginine rich splicing factor 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:41,278,225...41,284,502
Ensembl chr12:41,275,687...41,284,499
JBrowse link
G Strap serine/threonine kinase receptor associated protein involved_in ISO (PMID:33230114) RGD PMID:33230114 NCBI chr 4:170,646,042...170,660,291
Ensembl chr 4:170,646,001...170,660,828
JBrowse link
generation of catalytic spliceosome for first transesterification step term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC134482366 splicing factor YJU2-like involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104
G Xab2 XPA binding protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:1,667,672...1,679,702
Ensembl chr12:1,667,672...1,679,692
JBrowse link
G Yju2 YJU2 splicing factor involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 9:789,603...799,505
Ensembl chr 9:789,606...799,496
JBrowse link
generation of catalytic spliceosome for second transesterification step term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isy1 ISY1 splicing factor homolog involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 4:120,276,535...120,297,227
Ensembl chr 4:120,276,292...120,297,188
JBrowse link
G Prpf18 pre-mRNA processing factor 18 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:73,630,560...73,661,210
Ensembl chr17:73,630,571...73,690,979
JBrowse link
mRNA 3'-splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isy1 ISY1 splicing factor homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:120,276,535...120,297,227
Ensembl chr 4:120,276,292...120,297,188
JBrowse link
G Slu7 SLU7 homolog, splicing factor involved_in ISO
ISS
(PMID:15728250)
PMID:15181151
RGD PMID:15728250 PMID:15181151 RGD:1304333 NCBI chr10:27,908,325...27,923,784
Ensembl chr10:27,908,396...27,923,349
JBrowse link
mRNA 5'-splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000066758 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr  X:14,995,412...14,996,454 JBrowse link
G LOC120099250 U1 small nuclear ribonucleoprotein C-like involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr  X:135,673,708...135,678,865 JBrowse link
G Prpf39 pre-mRNA processing factor 39 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:83,088,981...83,113,826
Ensembl chr 6:83,088,986...83,113,825
JBrowse link
G Psip1 PC4 and SRSF1 interacting protein 1 involved_in ISO
IEA
ISS
(PMID:9885563)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:9885563 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:97,847,010...97,879,280
Ensembl chr 5:97,847,015...97,879,257
JBrowse link
G Sfswap splicing factor SWAP involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(PMID:8940107)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:8940107 GO_REF:0000033 GO_REF:0000107 NCBI chr12:27,109,607...27,179,941
Ensembl chr12:27,109,611...27,179,884
JBrowse link
G Snrpc small nuclear ribonucleoprotein polypeptide C involved_in IEA
IBA
GO_REF:0000104
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000104 NCBI chr20:5,888,453...5,906,638
Ensembl chr20:5,888,453...5,906,638
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 involved_in ISO (PMID:8940107), (PMID:9885563) RGD PMID:8940107 PMID:9885563 NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336
JBrowse link
G Srsf12 serine and arginine rich splicing factor 12 involved_in ISO (PMID:11684676) RGD PMID:11684676 NCBI chr 5:47,606,526...47,631,509
Ensembl chr 5:47,606,285...47,629,778
JBrowse link
mRNA cis splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3h9orf78 similar to human chromosome 9 open reading frame 78 involved_in ISO (PMID:35241646) RGD PMID:35241646 NCBI chr 3:14,264,262...14,272,552
Ensembl chr 3:14,264,083...14,272,764
JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:8,391,396...8,397,219
Ensembl chr 7:8,391,397...8,396,829
JBrowse link
G Clns1a chloride nucleotide-sensitive channel 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:152,019,369...152,039,670
Ensembl chr 1:152,019,378...152,039,661
JBrowse link
G Cwc15 CWC15 spliceosome-associated protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:11,305,401...11,316,326
Ensembl chr 8:11,305,424...11,316,325
JBrowse link
G Dcps decapping enzyme, scavenger involved_in ISS
ISO
GO_REF:0000024
(PMID:18426921)
UniProt
RGD
PMID:18426921 GO_REF:0000024 NCBI chr 8:33,468,669...33,524,407
Ensembl chr 8:33,415,671...33,524,389
JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
GO_REF:0000002
(PMID:18426921)
UniProt
Ensembl
InterPro
RGD
PMID:18426921 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr11:68,821,026...68,829,863
Ensembl chr11:68,817,740...68,851,885
JBrowse link
G Prpf40a pre-mRNA processing factor 40 homolog A involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:37,625,585...37,689,859
Ensembl chr 3:37,627,690...37,690,886
JBrowse link
G Prpf40b pre-mRNA processing factor 40 homolog B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:130,392,611...130,454,053
Ensembl chr 7:130,432,112...130,454,052
JBrowse link
G Prpf4b pre-mRNA processing factor 4B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:29,985,343...30,020,285
Ensembl chr17:29,985,343...30,019,625
JBrowse link
G Rbm17 RNA binding motif protein 17 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr17:66,937,140...66,954,034
Ensembl chr17:66,937,140...66,954,014
JBrowse link
G Rbm22 RNA binding motif protein 22 involved_in ISO
ISS
(PMID:22246180)
GO_REF:0000024
RGD
UniProt
PMID:22246180 GO_REF:0000024 NCBI chr18:54,013,374...54,024,182
Ensembl chr18:54,013,351...54,024,569
JBrowse link
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:202,690,472...202,699,136
Ensembl chr 1:202,690,459...202,699,136
JBrowse link
G Sde2 SDE2 telomere maintenance homolog involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:34365507)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:34365507 GO_REF:0000024 GO_REF:0000107 NCBI chr13:92,578,843...92,595,142
Ensembl chr13:92,578,874...92,595,140
JBrowse link
G Sf3a1 splicing factor 3A subunit 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:79,031,394...79,052,144
Ensembl chr14:79,031,394...79,052,144
JBrowse link
G Srsf7 serine and arginine rich splicing factor 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:14,811,775...14,818,968
Ensembl chr 6:14,811,808...14,818,965
JBrowse link
G Wbp4 WW domain binding protein 4 involved_in ISO
IEA
ISS
(PMID:19592703)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19592703 GO_REF:0000024 GO_REF:0000107 NCBI chr15:54,862,700...54,890,668
Ensembl chr15:54,862,843...54,890,647
JBrowse link
mRNA splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf1 CUGBP, Elav-like family member 1 involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
(PMID:11158314)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:11158314 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426
JBrowse link
G Celf2 CUGBP, Elav-like family member 2 involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
(PMID:11158314)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:11158314 GO_REF:0000033 GO_REF:0000107 NCBI chr17:70,904,462...71,729,072
Ensembl chr17:71,210,853...71,728,333
JBrowse link
G Celf3 CUGBP, Elav-like family member 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163
JBrowse link
G Celf4 CUGBP, Elav-like family member 4 acts_upstream_of_or_within ISO (PMID:11158314) RGD PMID:11158314 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
JBrowse link
G Celf5 CUGBP, Elav-like family member 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:8,225,787...8,250,322
Ensembl chr 7:8,225,825...8,250,322
JBrowse link
G Celf6 CUGBP, Elav-like family member 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:59,975,095...60,006,060
Ensembl chr 8:59,975,088...60,005,041
JBrowse link
G Khdc4 KH domain containing 4, pre-mRNA splicing factor involved_in ISO (PMID:19641227) RGD PMID:19641227 NCBI chr 2:174,149,059...174,177,816
Ensembl chr 2:174,149,141...174,177,504
JBrowse link
G Luc7l LUC7-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:15,273,340...15,307,131
Ensembl chr10:15,273,348...15,303,112
JBrowse link
G Luc7l2 LUC7-like 2 pre-mRNA splicing factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:67,287,593...67,347,986
Ensembl chr 4:67,287,640...67,347,964
JBrowse link
G Luc7l3 LUC7-like 3 pre-mRNA splicing factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:79,240,050...79,276,555
Ensembl chr10:79,240,563...79,276,538
JBrowse link
G Luc7l3-ps2 LUC7-like 3 pre-mRNA splicing factor, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:49,653,487...49,655,419 JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 acts_upstream_of_or_within ISO MGI:3052922 (PMID:14671308), (PMID:16717059) RGD PMID:14671308 PMID:16717059 NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368
JBrowse link
G Nol3 nucleolar protein 3 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:10196175)
UniProt
Ensembl
RGD
PMID:10196175 GO_REF:0000024 GO_REF:0000107 NCBI chr19:33,154,061...33,158,250
Ensembl chr19:33,154,062...33,158,250
JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4124189 (PMID:10829067), (PMID:22802532)
Ensembl
RGD
PMID:10829067 PMID:22802532 GO_REF:0000107 NCBI chr 2:207,812,659...207,874,019
Ensembl chr 2:207,812,920...207,873,506
JBrowse link
G Puf60 poly-U binding splicing factor 60 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:107,782,799...107,793,759
Ensembl chr 7:107,782,770...107,794,531
JBrowse link
G Rbmx RNA binding motif protein, X-linked IMP RGD PMID:19282290 RGD:2316827 NCBI chr  X:135,305,237...135,314,806
Ensembl chr  X:135,305,325...135,314,743
JBrowse link
G Rbmxl1 Rbmx like 1 involved_in IDA PMID:19282290 UniProt PMID:19282290 RGD:2316827 NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859
JBrowse link
G Setx senataxin involved_in ISO (PMID:19515850) RGD PMID:19515850 NCBI chr 3:12,428,091...12,480,801
Ensembl chr 3:12,427,635...12,480,803
JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 involved_in ISO (PMID:9774382) RGD PMID:9774382 NCBI chr 5:148,088,759...148,102,964
Ensembl chr 5:148,088,823...148,101,768
JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:12549914)
UniProt
RGD
PMID:12549914 GO_REF:0000024 NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20167602)
UniProt
RGD
PMID:20167602 GO_REF:0000024 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
JBrowse link
negative regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acin1 apoptotic chromatin condensation inducer 1 involved_in ISO (PMID:12665594) RGD PMID:12665594 NCBI chr15:28,102,112...28,147,001
Ensembl chr15:28,102,112...28,147,001
JBrowse link
G Akr1c1 aldo-keto reductase family 1, member C1 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr17:65,810,474...65,837,385
Ensembl chr17:65,810,475...65,837,326
JBrowse link
G C1qbp complement C1q binding protein involved_in ISO
IBA
IEA
ISS
(PMID:10022843)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:10022843 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:55,699,954...55,704,605
Ensembl chr10:55,699,954...55,704,649
JBrowse link
G Celf4 CUGBP, Elav-like family member 4 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:21470964)
Ensembl
RGD
PMID:21470964 GO_REF:0000107 NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 acts_upstream_of_or_within ISO (PMID:18480465) RGD PMID:18480465 NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IMP RGD PMID:22570490 RGD:9999428 NCBI chr 1:84,098,558...84,111,568
Ensembl chr 1:84,100,879...84,111,553
JBrowse link
G Npm1 nucleophosmin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16376875)
GO_REF:0000107
RGD
Ensembl
PMID:16376875 GO_REF:0000107 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Pcbp4 poly(rC) binding protein 4 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:23636947)
GO_Central
RGD
PMID:23636947 GO_REF:0000033 NCBI chr 8:107,092,688...107,103,276
Ensembl chr 8:107,093,013...107,103,276
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in
acts_upstream_of_or_within
ISO
ISS
(PMID:15009664)
(PMID:17679093)
(PMID:23636947)
GO_REF:0000024
RGD
UniProt
PMID:15009664 PMID:17679093 PMID:23636947 GO_REF:0000024 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397
JBrowse link
G Ptbp3 polypyrimidine tract binding protein 3 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 5:74,313,367...74,399,439
Ensembl chr 5:74,315,101...74,399,791
JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:23636947)
Ensembl
RGD
PMID:23636947 GO_REF:0000107 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575
JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in IMP
ISO
IDA
PMID:35394688
(PMID:27630136), (PMID:29895960), (PMID:33110103)
(PMID:24960161), (PMID:34732726)
PMID:25573899
PMID:23307558
RGD PMID:24960161 PMID:27630136 PMID:29895960 PMID:33110103 PMID:34732726 More... RGD:152025505, RGD:152025519, RGD:152025504, RGD:152025509 NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060
JBrowse link
G Rbm42 RNA binding motif protein 42 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 1:85,898,618...85,908,569
Ensembl chr 1:85,898,625...85,908,573
JBrowse link
G Rbmxl1 Rbmx like 1 involved_in IDA PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859
JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 involved_in ISO
ISS
(PMID:12665594)
GO_REF:0000024
RGD
UniProt
PMID:12665594 GO_REF:0000024 NCBI chr10:13,445,516...13,455,858
Ensembl chr10:13,445,653...13,455,858
JBrowse link
G Sap18 Sin3A associated protein 18 involved_in ISO (PMID:12665594) RGD PMID:12665594 NCBI chr15:31,943,228...31,947,534
Ensembl chr15:31,943,230...31,950,038
Ensembl chr10:31,943,230...31,950,038
JBrowse link
G Sfswap splicing factor SWAP involved_in IDA PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chr12:27,109,607...27,179,941
Ensembl chr12:27,109,611...27,179,884
JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 involved_in ISO (PMID:11684676) RGD PMID:11684676 NCBI chr 5:148,088,759...148,102,964
Ensembl chr 5:148,088,823...148,101,768
JBrowse link
G Srsf4 serine and arginine rich splicing factor 4 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 5:144,060,981...144,090,798
Ensembl chr 5:144,061,463...144,089,229
JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
JBrowse link
G Srsf7 serine and arginine rich splicing factor 7 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 6:14,811,775...14,818,968
Ensembl chr 6:14,811,808...14,818,965
JBrowse link
G Srsf9 serine and arginine rich splicing factor 9 involved_in ISO
ISS
(PMID:15009664)
GO_REF:0000024
RGD
UniProt
PMID:15009664 GO_REF:0000024 NCBI chr12:41,278,225...41,284,502
Ensembl chr12:41,275,687...41,284,499
JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 1:68,760,911...68,779,730
Ensembl chr 1:68,760,924...68,778,492
JBrowse link
positive regulation of mRNA cis splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif1 eukaryotic translation initiation factor 1 acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr10:85,246,751...85,248,842
Ensembl chr10:85,246,764...85,427,327
JBrowse link
G Exosc10 exosome component 10 acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr 5:158,995,313...159,018,940
Ensembl chr 5:158,995,313...159,018,940
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568
JBrowse link
G Upf3a UPF3A, regulator of nonsense mediated mRNA decay acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr16:75,757,442...75,768,478
Ensembl chr16:75,757,441...75,769,345
JBrowse link
G Upf3b UPF3B, regulator of nonsense mediated mRNA decay acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr  X:116,335,308...116,353,332
Ensembl chr  X:116,335,308...116,353,236
JBrowse link
positive regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf3 CUGBP, Elav-like family member 3 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163
JBrowse link
G Celf4 CUGBP, Elav-like family member 4 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
JBrowse link
G Cirbp cold inducible RNA binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:9,533,857...9,538,899
Ensembl chr 7:9,424,178...9,538,818
JBrowse link
G Dazap1 DAZ associated protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:23636947)
GO_Central
RGD
PMID:23636947 GO_REF:0000033 NCBI chr 7:9,423,673...9,448,116
Ensembl chr 7:9,424,178...9,538,818
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 acts_upstream_of_or_within ISO (PMID:18480465) RGD PMID:18480465 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057
JBrowse link
G Haus8l2 HAUS augmin-like complex, subunit 8 like 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533
JBrowse link
G Hmx2 H6 family homeobox 2 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 1:186,319,110...186,326,771
Ensembl chr 1:186,319,110...186,326,771
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:23636947)
Ensembl
RGD
PMID:23636947 GO_REF:0000107 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Lmntd2 lamin tail domain containing 2 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 1:196,315,112...196,320,880
Ensembl chr 1:196,315,115...196,319,156
JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in ISO (PMID:23793891) RGD PMID:23793891 NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089
JBrowse link
G Ncl nucleolin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:86,999,588...87,008,112
Ensembl chr 9:86,998,019...87,008,136
JBrowse link
G Nup98 nucleoporin 98 and 96 precursor involved_in ISO
ISS
(PMID:28221134)
GO_REF:0000024
RGD
UniProt
PMID:28221134 GO_REF:0000024 NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415
JBrowse link
G Obi1 ORC ubiquitin ligase 1 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr15:81,269,413...81,308,734
Ensembl chr15:81,269,416...81,308,734
JBrowse link
G Prdx6 peroxiredoxin 6 involved_in ISO UniProtKB:Q8IWL8 (PMID:16186110) RGD PMID:16186110 NCBI chr13:73,528,746...73,539,295
Ensembl chr13:73,528,210...73,539,355
JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:18480465)
Ensembl
RGD
PMID:18480465 GO_REF:0000107 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662
JBrowse link
G Rbm3 RNA binding motif protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:14,348,909...14,352,387
Ensembl chr  X:14,348,910...14,353,580
JBrowse link
G Rbmx RNA binding motif protein, X-linked involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:135,305,237...135,314,806
Ensembl chr  X:135,305,325...135,314,743
JBrowse link
G Rbmxl1 Rbmx like 1 involved_in IDA
IBA
PMID:19282290
GO_REF:0000033
GO_Central PMID:19282290 GO_REF:0000033, RGD:2316827 NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859
JBrowse link
G Rbmxl1b Rbmx like 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:43,956,275...43,957,957
Ensembl chr 4:43,956,281...43,957,944
JBrowse link
G Rbmy1j RNA binding motif protein, Y-linked, family 1, member J involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  Y:415,160...425,460
Ensembl chr  Y:415,178...425,426
JBrowse link
G Slc39a5 solute carrier family 39 member 5 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 7:822,873...830,865
Ensembl chr 7:824,818...830,242
JBrowse link
G Slirp SRA stem-loop interacting RNA binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:107,088,760...107,097,791
Ensembl chr 6:107,088,403...107,097,791
JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 1:95,856,038...95,876,434
Ensembl chr 1:95,856,036...95,876,392
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:12840015) RGD PMID:12840015 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:20123736)
UniProt
RGD
PMID:20123736 GO_REF:0000024 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477
JBrowse link
G Tra2a transformer 2 alpha involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:22194695)
GO_Central
RGD
PMID:22194695 GO_REF:0000033 NCBI chr 4:78,220,838...78,239,737
Ensembl chr 4:78,220,883...78,239,712
JBrowse link
G Tra2b transformer 2 beta involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
IEA
GO_REF:0000024
MGI:2176173|MGI:4450919 (PMID:22194695)
GO_REF:0000033
GO_REF:0000107
(PMID:15009664)
UniProt
RGD
GO_Central
Ensembl
PMID:15009664 PMID:22194695 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249
JBrowse link
G Zfp64 zinc finger protein 64 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 3:157,666,819...157,695,774
Ensembl chr 3:157,633,211...157,695,809
JBrowse link
regulation of alternative mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arb2a ARB2 cotranscriptional regulator A involved_in ISO (PMID:29311329) RGD PMID:29311329 NCBI chr 2:7,553,873...8,018,183
Ensembl chr 2:7,553,891...8,018,162
JBrowse link
G Arglu1 arginine and glutamate rich 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:30698747)
UniProt
RGD
PMID:30698747 GO_REF:0000024 NCBI chr16:80,753,300...80,777,350
Ensembl chr16:80,753,315...80,777,349
JBrowse link
G Celf1 CUGBP, Elav-like family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(PMID:32109384)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:32109384 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426
JBrowse link
G Celf2 CUGBP, Elav-like family member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:70,904,462...71,729,072
Ensembl chr17:71,210,853...71,728,333
JBrowse link
G Celf3 CUGBP, Elav-like family member 3 involved_in ISO
IBA
(PMID:11158314)
GO_REF:0000033
RGD
GO_Central
PMID:11158314 GO_REF:0000033 NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163
JBrowse link
G Celf4 CUGBP, Elav-like family member 4 involved_in
acts_upstream_of_or_within
ISO (PMID:11158314)
(PMID:19720736)
RGD PMID:11158314 PMID:19720736 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
JBrowse link
G Celf5 CUGBP, Elav-like family member 5 involved_in ISO
IBA
(PMID:11158314)
GO_REF:0000033
RGD
GO_Central
PMID:11158314 GO_REF:0000033 NCBI chr 7:8,225,787...8,250,322
Ensembl chr 7:8,225,825...8,250,322
JBrowse link
G Celf6 CUGBP, Elav-like family member 6 involved_in ISO
IBA
(PMID:14761971)
GO_REF:0000033
RGD
GO_Central
PMID:14761971 GO_REF:0000033 NCBI chr 8:59,975,095...60,006,060
Ensembl chr 8:59,975,088...60,005,041
JBrowse link
G Ddx17 DEAD-box helicase 17 involved_in ISO (PMID:23022728) RGD PMID:23022728 NCBI chr 7:111,091,127...111,109,353
Ensembl chr 7:111,089,445...111,109,193
JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (PMID:21343338), (PMID:23022728)
(PMID:23022728)
RGD PMID:21343338 PMID:23022728 NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283
JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in IDA PMID:22767602 UniProt PMID:22767602 RGD:8554210 NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057
JBrowse link
G Fblim1 filamin binding LIM protein 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:153,883,945...153,915,524
Ensembl chr 5:153,883,960...153,913,757
JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in ISO
ISS
(PMID:18653529)
GO_REF:0000024
RGD
UniProt
PMID:18653529 GO_REF:0000024 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO
IEA
(PMID:25689357)
GO_REF:0000107
RGD
Ensembl
PMID:25689357 GO_REF:0000107 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L involved_in ISO
IEA
ISS
(PMID:25623890)
(PMID:22523384)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22523384 PMID:25623890 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:84,098,558...84,111,568
Ensembl chr 1:84,100,879...84,111,553
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISO
GO_REF:0000107
(PMID:22325991)
Ensembl
RGD
PMID:22325991 GO_REF:0000107 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in ISS
IBA
IDA
ISO
GO_REF:0000024
GO_REF:0000033
PMID:15345239
(PMID:24514149)
UniProt
GO_Central
RGD
PMID:24514149 PMID:15345239 GO_REF:0000024 GO_REF:0000033, RGD:1358238 NCBI chr 5:142,051,844...142,089,175
Ensembl chr 5:142,063,570...142,089,180
JBrowse link
G Khdrbs2 KH RNA binding domain containing, signal transduction associated 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:34,447,023...34,953,684
Ensembl chr 9:34,447,056...34,915,530
JBrowse link
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 involved_in IDA
IBA
PMID:15345239
GO_REF:0000033
GO_Central PMID:15345239 GO_REF:0000033, RGD:1358238 NCBI chr 7:100,837,707...100,995,644
Ensembl chr 7:100,837,934...100,988,460
JBrowse link
G Magoh mago homolog, exon junction complex subunit involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:22203037)
UniProt
Ensembl
RGD
PMID:22203037 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:122,639,268...122,646,650
Ensembl chr 5:122,639,308...122,646,617
JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 involved_in IMP PMID:31283468 UniProt PMID:31283468 RGD:243049249 NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368
JBrowse link
G Mbnl2 muscleblind-like splicing regulator 2 involved_in
acts_upstream_of_or_within
IMP
ISO
PMID:31283468
(PMID:19720736)
RGD PMID:19720736 PMID:31283468 RGD:243049249 NCBI chr15:97,385,278...97,542,924
Ensembl chr15:97,385,244...97,542,937
JBrowse link
G Myod1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within
ISS
ISO
PMID:9525963
(PMID:9525963)
RGD PMID:9525963 PMID:9525963 RGD:8553451 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Nova1 NOVA alternative splicing regulator 1 involved_in ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:14615540), (PMID:17065982), (PMID:27223325)
GO_REF:0000033
GO_REF:0000107
UniProt
RGD
GO_Central
Ensembl
PMID:14615540 PMID:17065982 PMID:27223325 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:63,780,105...63,905,567
Ensembl chr 6:63,783,489...63,906,289
JBrowse link
G Nova2 NOVA alternative splicing regulator 2 involved_in ISO
IBA
(PMID:32197073)
(PMID:14615540), (PMID:16041372), (PMID:17065982), (PMID:27223325)
GO_REF:0000033
RGD
GO_Central
PMID:14615540 PMID:16041372 PMID:17065982 PMID:27223325 PMID:32197073 GO_REF:0000033 NCBI chr 1:78,572,253...78,613,703
Ensembl chr 1:78,572,279...78,608,021
JBrowse link
G Nsrp1 nuclear speckle splicing regulatory protein 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
GO_REF:0000002
(PMID:21296756)
UniProt
Ensembl
InterPro
RGD
PMID:21296756 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr10:61,880,807...61,914,471
Ensembl chr10:61,880,825...61,914,471
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in ISO
ISS
(PMID:16260624), (PMID:21518792)
GO_REF:0000024
RGD
UniProt
PMID:16260624 PMID:21518792 GO_REF:0000024 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397
JBrowse link
G Puf60 poly-U binding splicing factor 60 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 7:107,782,799...107,793,759
Ensembl chr 7:107,782,770...107,794,531
JBrowse link
G Rbfox1 RNA binding fox-1 homolog 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:23300487)
GO_Central
RGD
PMID:23300487 GO_REF:0000033 NCBI chr10:8,152,198...10,248,120
Ensembl chr10:8,152,198...9,686,659
JBrowse link
G Rbfox2 RNA binding fox-1 homolog 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
IMP
GO_REF:0000002
(PMID:17101796), (PMID:17715393)
MGI:1926224|MGI:4838182 (PMID:22357600)
GO_REF:0000033
PMID:37548402
Cacna1c
Fxr1, Mef2a, Mtmr3
Atp2b1, Mef2a
Mcl1
GO_REF:0000107
InterPro
RGD
GO_Central
Ensembl
PMID:17101796 PMID:17715393 PMID:22357600 PMID:37548402 PMID:28993448 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107, RGD:401901235, RGD:329848961, RGD:329845874, RGD:329845873, RGD:329845872 NCBI chr 7:108,810,627...109,054,420
Ensembl chr 7:108,810,628...109,054,691
JBrowse link
G Rbfox3 RNA binding fox-1 homolog 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:103,720,355...104,157,277
Ensembl chr10:103,720,636...104,156,935
JBrowse link
G Rbm11 RNA binding motif protein 11 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:21984414)
GO_REF:0000033
RGD
GO_Central
PMID:21984414 GO_REF:0000033 NCBI chr11:14,234,851...14,244,092
Ensembl chr11:14,234,890...14,244,090
JBrowse link
G Rbm15 RNA binding motif protein 15 involved_in ISO
IBA
(PMID:26575292)
(PMID:25468569)
GO_REF:0000033
RGD
GO_Central
PMID:25468569 PMID:26575292 GO_REF:0000033 NCBI chr 2:194,945,974...194,954,498
Ensembl chr 2:194,945,974...194,954,703
JBrowse link
G Rbm15b RNA binding motif protein 15B involved_in ISO
IBA
(PMID:16129689)
GO_REF:0000033
RGD
GO_Central
PMID:16129689 GO_REF:0000033 NCBI chr 8:107,543,613...107,546,678
Ensembl chr 8:107,525,898...107,551,696
JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in IMP
IDA
PMID:33805770
PMID:27289039
UniProt PMID:33805770 PMID:27289039 RGD:152995553, RGD:152995577 NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO
IBA
IDA
(PMID:26844700), (PMID:26990106), (PMID:29104163)
(PMID:25313962)
GO_REF:0000033
PMID:27289039
RGD
GO_Central
PMID:25313962 PMID:26844700 PMID:26990106 PMID:29104163 PMID:27289039 GO_REF:0000033, RGD:152995577 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
JBrowse link
G Rbm25 RNA binding motif protein 25 involved_in ISO
IBA
(PMID:18663000)
GO_REF:0000033
RGD
GO_Central
PMID:18663000 GO_REF:0000033 NCBI chr 6:103,271,775...103,319,090
Ensembl chr 6:103,271,801...103,317,854
JBrowse link
G Rbm25l1 RNA binding motif protein 25-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:10,267,026...10,270,510
Ensembl chr10:10,267,260...10,269,710
JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in
acts_upstream_of_or_within
ISO (PMID:12628928), (PMID:16260624), (PMID:16777844), (PMID:16934801), (PMID:21518792)
MGI:5467987|MGI:5467988 (PMID:23129807)
RGD PMID:12628928 PMID:16260624 PMID:16777844 PMID:16934801 PMID:21518792 More... NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380
JBrowse link
G Rbm47 RNA binding motif protein 47 involved_in ISO (PMID:31358901) RGD PMID:31358901 NCBI chr14:42,053,290...42,191,572
Ensembl chr14:42,154,142...42,189,431
JBrowse link
G Rbm5 RNA binding motif protein 5 involved_in ISO
IEA
ISS
(PMID:18840686), (PMID:18951082)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:18840686 PMID:18951082 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:108,420,220...108,449,481
Ensembl chr 8:108,420,222...108,449,430
JBrowse link
G Rbm8a RNA binding motif protein 8A involved_in ISS
ISO
GO_REF:0000024
(PMID:22203037)
UniProt
RGD
PMID:22203037 GO_REF:0000024 NCBI chr 2:184,165,189...184,167,959
Ensembl chr 2:184,165,193...184,167,959
JBrowse link
G Rbmx RNA binding motif protein, X-linked involved_in ISO
IEA
(PMID:12165565), (PMID:12761049)
GO_REF:0000107
RGD
Ensembl
PMID:12165565 PMID:12761049 GO_REF:0000107 NCBI chr  X:135,305,237...135,314,806
Ensembl chr  X:135,305,325...135,314,743
JBrowse link
G Rbmxl1 Rbmx like 1 involved_in IDA PMID:19282290 UniProt PMID:19282290 RGD:2316827 NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859
JBrowse link
G Rbpms RNA binding protein, mRNA processing factor involved_in IMP PMID:37548402 UniProt PMID:37548402 RGD:401901235 NCBI chr16:58,239,370...58,395,424
Ensembl chr16:58,239,474...58,395,426
JBrowse link
G Rbpms2 RNA binding protein, mRNA processing factor 2 involved_in IDA PMID:31283468 UniProt PMID:31283468 RGD:243049249 NCBI chr 8:66,153,169...66,184,278
Ensembl chr 8:66,153,593...66,184,268
JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
ISO
GO_REF:0000024
(PMID:21884984)
UniProt
RGD
PMID:21884984 GO_REF:0000024 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 involved_in ISO
ISS
(PMID:22203037)
GO_REF:0000024
RGD
UniProt
PMID:22203037 GO_REF:0000024 NCBI chr10:13,445,516...13,455,858
Ensembl chr10:13,445,653...13,455,858
JBrowse link
G Sap18 Sin3A associated protein 18 involved_in ISO (PMID:20966198), (PMID:22203037) RGD PMID:20966198 PMID:22203037 NCBI chr15:31,943,228...31,947,534
Ensembl chr15:31,943,230...31,950,038
Ensembl chr10:31,943,230...31,950,038
JBrowse link
G Smu1 SMU1, DNA replication regulator and spliceosomal factor involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:55,856,691...55,875,262
Ensembl chr 5:55,856,246...55,875,300
JBrowse link
G Srrm4 serine/arginine repetitive matrix 4 involved_in
acts_upstream_of_or_within
ISO (PMID:29961578)
(PMID:25727884)
MGI:1856676 (PMID:23055939)
RGD PMID:23055939 PMID:25727884 PMID:29961578 NCBI chr12:39,998,975...40,158,897
Ensembl chr12:39,999,488...40,155,725
JBrowse link
G Srsf12 serine and arginine rich splicing factor 12 involved_in ISO (PMID:11684676) RGD PMID:11684676 NCBI chr 5:47,606,526...47,631,509
Ensembl chr 5:47,606,285...47,629,778
JBrowse link
G Srsf19 serine and arginine rich splicing factor 19 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:45,695,314...45,741,153
Ensembl chr  X:45,695,313...45,741,134
JBrowse link
G Srsf2 serine and arginine rich splicing factor 2 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:21470964)
GO_REF:0000033
RGD
GO_Central
PMID:21470964 GO_REF:0000033 NCBI chr10:102,052,158...102,055,365
Ensembl chr10:102,052,314...102,055,338
JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:23132731)
(PMID:24440982)
UniProt
RGD
PMID:23132731 PMID:24440982 GO_REF:0000024 NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO
ISS
(PMID:20932480)
GO_REF:0000024
RGD
UniProt
PMID:20932480 GO_REF:0000024 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477
JBrowse link
G Tia1 TIA1 cytotoxic granule-associated RNA binding protein involved_in ISO (PMID:14966131), (PMID:17580305)
(PMID:10938105), (PMID:11514562)
RGD PMID:10938105 PMID:11514562 PMID:14966131 PMID:17580305 NCBI chr 4:118,852,765...118,883,252
Ensembl chr 4:118,852,837...118,880,586
JBrowse link
G Tra2b transformer 2 beta involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:12165565), (PMID:12761049), (PMID:25689357)
UniProt
Ensembl
RGD
PMID:12165565 PMID:12761049 PMID:25689357 GO_REF:0000024 GO_REF:0000107 NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249
JBrowse link
G Wtap WT1 associated protein involved_in ISO
IBA
(PMID:24407421)
GO_REF:0000033
RGD
GO_Central
PMID:24407421 GO_REF:0000033 NCBI chr 1:47,665,965...47,691,067
Ensembl chr 1:47,665,965...47,691,065
JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(PMID:29799838)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:29799838 GO_REF:0000033 GO_REF:0000107 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in ISO
ISS
IEA
(PMID:24514149)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:24514149 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539
JBrowse link
regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpk heterogeneous nuclear ribonucleoprotein K involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in ISO
IEA
ISS
(PMID:19574390)
(PMID:21300889)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19574390 PMID:21300889 GO_REF:0000024 GO_REF:0000107 NCBI chr10:102,041,131...102,047,182
Ensembl chr10:102,041,120...102,047,182
JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in ISO (PMID:22196734) RGD PMID:22196734 NCBI chr 5:142,051,844...142,089,175
Ensembl chr 5:142,063,570...142,089,180
JBrowse link
G Khdrbs2 KH RNA binding domain containing, signal transduction associated 2 involved_in ISO (PMID:22196734) RGD PMID:22196734 NCBI chr 9:34,447,023...34,953,684
Ensembl chr 9:34,447,056...34,915,530
JBrowse link
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 involved_in IEA
ISO
GO_REF:0000117
(PMID:22196734)
UniProt
RGD
PMID:22196734 GO_REF:0000117 NCBI chr 7:100,837,707...100,995,644
Ensembl chr 7:100,837,934...100,988,460
JBrowse link
G Larp7 La ribonucleoprotein 7, transcriptional regulator involved_in ISO
ISS
(PMID:32017898)
(PMID:32017896)
GO_REF:0000024
RGD
UniProt
PMID:32017896 PMID:32017898 GO_REF:0000024 NCBI chr 2:215,997,641...216,012,833
Ensembl chr 2:215,997,649...216,012,865
JBrowse link
G LOC100359916 heterogeneous nuclear ribonucleoprotein K-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:58,668,326...58,670,222
Ensembl chr 5:58,668,327...58,670,220
JBrowse link
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in
NOT|involved_in
ISO (PMID:28525753)
(PMID:29262316)
RGD PMID:28525753 PMID:29262316 NCBI chr10:59,640,915...59,697,291
Ensembl chr10:59,640,972...59,687,061
JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:33378678), (PMID:33397958), (PMID:36627242)
(PMID:29021242)
GO_REF:0000033
(PMID:27029405), (PMID:31331967)
(PMID:34428287)
GO_REF:0000107
UniProt
RGD
GO_Central
Ensembl
PMID:27029405 PMID:29021242 PMID:31331967 PMID:33378678 PMID:33397958 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831
JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in ISO (PMID:26604136), (PMID:27496873), (PMID:30948719), (PMID:32840935)
(PMID:33188278)
RGD PMID:26604136 PMID:27496873 PMID:30948719 PMID:32840935 PMID:33188278 NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060
JBrowse link
G Rbm39 RNA binding motif protein 39 involved_in ISO (PMID:15694343), (PMID:28302793), (PMID:28437394) RGD PMID:15694343 PMID:28302793 PMID:28437394 NCBI chr 3:144,662,998...144,696,222
Ensembl chr 3:144,663,001...144,696,213
JBrowse link
G Sf1 splicing factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:203,670,016...203,683,432
Ensembl chr 1:203,670,018...203,684,330
JBrowse link
G Son SON DNA and RNA binding protein involved_in ISO
IBA
(PMID:21504830)
GO_REF:0000033
RGD
GO_Central
PMID:21504830 GO_REF:0000033 NCBI chr11:30,850,890...30,923,167
Ensembl chr11:30,892,005...30,923,167
JBrowse link
G Srrm1 serine and arginine repetitive matrix 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:147,559,515...147,591,895
Ensembl chr 5:147,559,514...147,591,849
JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 involved_in ISO (PMID:26876937) RGD PMID:26876937 NCBI chr 5:148,088,759...148,102,964
Ensembl chr 5:148,088,823...148,101,768
JBrowse link
G Srsf3 serine and arginine rich splicing factor 3 involved_in ISO (PMID:26876937), (PMID:32440474) RGD PMID:26876937 PMID:32440474 NCBI chr20:7,091,928...7,101,860
Ensembl chr20:7,091,910...7,101,078
JBrowse link
G Tia1 TIA1 cytotoxic granule-associated RNA binding protein involved_in ISO (PMID:11106748), (PMID:7488725) RGD PMID:7488725 PMID:11106748 NCBI chr 4:118,852,765...118,883,252
Ensembl chr 4:118,852,837...118,880,586
JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in ISO
ISS
(PMID:26876937), (PMID:28984244)
GO_REF:0000024
RGD
UniProt
PMID:26876937 PMID:28984244 GO_REF:0000024 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
JBrowse link
spliceosomal complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crnkl1 crooked neck pre-mRNA splicing factor 1 involved_in ISO
IBA
ISS
(PMID:12084575)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:12084575 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:133,338,593...133,354,329
Ensembl chr 3:133,337,039...133,354,302
Ensembl chr 6:133,337,039...133,354,302
JBrowse link
G Ddx39b DExD-box helicase 39B involved_in ISO
IEA
(PMID:18593880)
GO_REF:0000107
RGD
Ensembl
PMID:18593880 GO_REF:0000107 NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996
JBrowse link
G Gcfc2 GC-rich sequence DNA-binding factor 2 involved_in ISO (PMID:24304693) RGD PMID:24304693 NCBI chr 4:114,481,613...114,519,268
Ensembl chr 4:114,481,607...114,519,962
JBrowse link
G Gemin2 gem (nuclear organelle) associated protein 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:76,706,424...76,721,154
Ensembl chr 6:76,707,523...76,721,153
JBrowse link
G Gemin6 gem (nuclear organelle) associated protein 6 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:14,786,090...14,790,617
Ensembl chr 6:14,786,070...14,790,612
JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in ISO (PMID:23793891) RGD PMID:23793891 NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089
JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in ISO
IEA
(PMID:16332694)
GO_REF:0000107
RGD
Ensembl
PMID:16332694 GO_REF:0000107 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662
JBrowse link
G Rbm5 RNA binding motif protein 5 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:18951082)
UniProt
Ensembl
RGD
PMID:18951082 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:108,420,220...108,449,481
Ensembl chr 8:108,420,222...108,449,430
JBrowse link
G Rsrp1 arginine and serine rich protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:34042961)
UniProt
RGD
PMID:34042961 GO_REF:0000024 NCBI chr 5:147,147,774...147,151,523
Ensembl chr 5:147,147,784...147,151,523
JBrowse link
G Scaf11 SR-related CTD-associated factor 11 involved_in ISO
IBA
(PMID:9447963)
GO_REF:0000033
RGD
GO_Central
PMID:9447963 GO_REF:0000033 NCBI chr 7:127,571,678...127,624,089
Ensembl chr 7:127,574,463...127,624,101
JBrowse link
G Sf3a2 splicing factor 3A subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:8,909,507...8,916,104
Ensembl chr 7:8,909,507...8,915,530
JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300
JBrowse link
G Smn1 survival of motor neuron 1, telomeric involved_in ISO (PMID:9845364) RGD PMID:9845364 NCBI chr 2:31,490,018...31,501,065
Ensembl chr 2:31,490,015...31,501,060
JBrowse link
G Srpk1 SRSF protein kinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:6,645,809...6,682,448
Ensembl chr20:6,645,809...6,682,134
JBrowse link
G Srpk2 SRSF protein kinase 2 involved_in ISO
IBA
(PMID:9472028)
(PMID:9446799)
GO_REF:0000033
RGD
GO_Central
PMID:9446799 PMID:9472028 GO_REF:0000033 NCBI chr 4:11,464,684...11,655,993
Ensembl chr 4:11,464,674...11,655,990
JBrowse link
G Srpk3 SRSF protein kinase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:151,510,452...151,515,208
Ensembl chr  X:151,510,539...151,515,198
JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,760,911...68,779,730
Ensembl chr 1:68,760,924...68,778,492
JBrowse link
G Usp39 ubiquitin specific peptidase 39 involved_in ISO
IBA
(PMID:11350945)
GO_REF:0000033
RGD
GO_Central
PMID:11350945 GO_REF:0000033 NCBI chr 4:104,373,948...104,406,359
Ensembl chr 4:104,373,955...104,406,359
JBrowse link
G Zrsr2 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 involved_in ISO (PMID:21041408) RGD PMID:21041408 NCBI chr  X:30,547,424...30,571,613
Ensembl chr  X:30,547,536...30,570,125
JBrowse link
spliceosomal complex disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc17 DnaJ heat shock protein family (Hsp40) member C17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:106,162,197...106,195,771
Ensembl chr 3:106,162,197...106,195,751
JBrowse link
G Tfip11 tuftelin interacting protein 11 involved_in ISO
IBA
IEA
ISS
(PMID:19103666)
(PMID:19857462)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000024
RGD
GO_Central
InterPro
UniProt
PMID:19103666 PMID:19857462 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr12:44,299,619...44,311,851
Ensembl chr12:44,299,622...44,311,855
JBrowse link
spliceosomal snRNP assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07042226.1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr  X:144,806,986...144,812,552 JBrowse link
G Clns1a chloride nucleotide-sensitive channel 1A involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000002
(PMID:18984161)
UniProt
GO_Central
InterPro
RGD
PMID:18984161 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:152,019,369...152,039,670
Ensembl chr 1:152,019,378...152,039,661
JBrowse link
G Coil coilin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:73,789,077...73,810,378
Ensembl chr10:73,789,488...73,810,393
JBrowse link
G Ddx20 DEAD-box helicase 20 involved_in ISO
IBA
(PMID:12067652), (PMID:18984161)
GO_REF:0000033
RGD
GO_Central
PMID:12067652 PMID:18984161 GO_REF:0000033 NCBI chr 2:193,158,761...193,168,484
Ensembl chr 2:193,158,823...193,166,774
JBrowse link
G ENSRNOG00000063060 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 6:84,273,587...84,274,496 JBrowse link
G ENSRNOG00000063333 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr  X:93,293,758...93,294,114 JBrowse link
G ENSRNOG00000064062 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr19:33,454,456...33,455,388 JBrowse link
G ENSRNOG00000066758 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr  X:14,995,412...14,996,454 JBrowse link
G ENSRNOG00000068015 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr  X:133,878,251...133,878,959 JBrowse link
G ENSRNOG00000068876 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 9:112,301,511...112,302,585 JBrowse link
G Gemin2 gem (nuclear organelle) associated protein 2 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:12067652), (PMID:18984161), (PMID:31799625)
UniProt
GO_Central
RGD
PMID:12067652 PMID:18984161 PMID:31799625 GO_REF:0000024 GO_REF:0000033 NCBI chr 6:76,706,424...76,721,154
Ensembl chr 6:76,707,523...76,721,153
JBrowse link
G Gemin4 gem (nuclear organelle) associated protein 4 involved_in ISO
IBA
(PMID:12067652), (PMID:18984161)
GO_REF:0000033
RGD
GO_Central
PMID:12067652 PMID:18984161 GO_REF:0000033 NCBI chr10:61,062,420...61,073,529
Ensembl chr10:61,066,425...61,073,431
Ensembl chr10:61,066,425...61,073,431
JBrowse link
G Gemin5 gem (nuclear organelle) associated protein 5 involved_in ISO
IBA
(PMID:12067652), (PMID:18984161)
GO_REF:0000033
RGD
GO_Central
PMID:12067652 PMID:18984161 GO_REF:0000033 NCBI chr10:42,295,729...42,342,902
Ensembl chr10:42,297,515...42,342,892
JBrowse link
G Gemin6 gem (nuclear organelle) associated protein 6 involved_in ISO
IBA
(PMID:12067652), (PMID:18984161)
GO_REF:0000033
RGD
GO_Central
PMID:12067652 PMID:18984161 GO_REF:0000033 NCBI chr 6:14,786,090...14,790,617
Ensembl chr 6:14,786,070...14,790,612
JBrowse link
G Gemin7 gem (nuclear organelle) associated protein 7 involved_in ISO
IBA
(PMID:12067652), (PMID:18984161)
GO_REF:0000033
RGD
GO_Central
PMID:12067652 PMID:18984161 GO_REF:0000033 NCBI chr 1:79,215,054...79,228,769
Ensembl chr 1:79,214,919...79,224,994
JBrowse link
G Gemin7l1 gem (nuclear organelle) associated protein 7-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:78,269,910...78,270,681
Ensembl chr 4:78,269,888...78,270,669
JBrowse link
G Gemin8 gem (nuclear organelle) associated protein 8 involved_in ISO
IBA
(PMID:12067652), (PMID:16434402), (PMID:18984161)
GO_REF:0000033
RGD
GO_Central
PMID:12067652 PMID:16434402 PMID:18984161 GO_REF:0000033 NCBI chr  X:28,259,806...28,278,641
Ensembl chr  X:28,259,793...28,278,663
JBrowse link
G Glod4 glyoxalase domain containing 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:61,077,535...61,095,876
Ensembl chr10:61,066,421...61,095,898
JBrowse link
G LOC108350623 small nuclear ribonucleoprotein F-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:155,116,497...155,116,945 JBrowse link
G LOC108352309 small nuclear ribonucleoprotein F-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:33,533,614...33,533,927
Ensembl chr11:33,533,512...33,533,871
JBrowse link
G LOC120099250 U1 small nuclear ribonucleoprotein C-like involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr  X:135,673,708...135,678,865 JBrowse link
G LOC120100604 small nuclear ribonucleoprotein G-like involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:186,400,521...186,402,953
Ensembl chr 2:186,400,857...186,401,087
JBrowse link
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,755,481...18,761,106
Ensembl chr16:18,755,484...18,760,926
JBrowse link
G Prmt5 protein arginine methyltransferase 5 involved_in ISO (PMID:17709427) RGD PMID:17709427 NCBI chr15:27,968,893...27,978,291
Ensembl chr15:27,968,910...27,978,296
JBrowse link
G Prmt7 protein arginine methyltransferase 7 involved_in ISO
IEA
ISS
(PMID:17709427)
GO_REF:0000104
GO_REF:0000024
RGD
UniProt
PMID:17709427 GO_REF:0000024 GO_REF:0000104 NCBI chr19:34,110,724...34,161,531
Ensembl chr19:34,110,747...34,162,577
JBrowse link
G Prpf4b pre-mRNA processing factor 4B involved_in ISS
ISO
GO_REF:0000024
(PMID:12077342)
UniProt
RGD
PMID:12077342 GO_REF:0000024 NCBI chr17:29,985,343...30,020,285
Ensembl chr17:29,985,343...30,019,625
JBrowse link
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein involved_in
NOT|involved_in
ISO (PMID:14749385), (PMID:15314151)
(PMID:15314151)
RGD PMID:14749385 PMID:15314151 NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
JBrowse link
G Smn1 survival of motor neuron 1, telomeric involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:12067652), (PMID:18984161)
UniProt
GO_Central
RGD
PMID:12067652 PMID:18984161 GO_REF:0000024 GO_REF:0000033 NCBI chr 2:31,490,018...31,501,065
Ensembl chr 2:31,490,015...31,501,060
JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 involved_in ISO
ISS
(PMID:18984161)
GO_REF:0000024
RGD
UniProt
PMID:18984161 GO_REF:0000024 NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339
JBrowse link
G Snrpc small nuclear ribonucleoprotein polypeptide C involved_in ISO
IEA
(PMID:8972845)
GO_REF:0000104
RGD
UniProt
PMID:8972845 GO_REF:0000104 NCBI chr20:5,888,453...5,906,638
Ensembl chr20:5,888,453...5,906,638
JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide involved_in ISO
IBA
(PMID:18984161)
GO_REF:0000033
RGD
GO_Central
PMID:18984161 GO_REF:0000033 NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256
JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide involved_in ISO
IBA
(PMID:18984161)
GO_REF:0000033
RGD
GO_Central
PMID:18984161 GO_REF:0000033 NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351
JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide involved_in ISO
IBA
(PMID:18984161)
GO_REF:0000033
RGD
GO_Central
PMID:18984161 GO_REF:0000033 NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978
JBrowse link
G Snrpd3l1 small nuclear ribonucleoprotein D3 polypeptide like 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr19:12,396,026...12,396,454
Ensembl chr19:12,396,026...12,396,454
JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E involved_in ISO
IBA
(PMID:18984161)
GO_REF:0000033
RGD
GO_Central
PMID:18984161 GO_REF:0000033 NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310
Ensembl chr 8:45,050,986...45,057,310
JBrowse link
G Snrpepl2 small nuclear ribonucleoprotein polypeptide E like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:133,709,656...133,710,137
Ensembl chr 1:133,709,797...133,710,075
JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F involved_in ISO (PMID:18984161) RGD PMID:18984161 NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129
JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G involved_in ISO (PMID:18984161) RGD PMID:18984161 NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826
JBrowse link
G Strap serine/threonine kinase receptor associated protein involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:12067652), (PMID:18984161)
UniProt
GO_Central
RGD
PMID:12067652 PMID:18984161 GO_REF:0000024 GO_REF:0000033 NCBI chr 4:170,646,042...170,660,291
Ensembl chr 4:170,646,001...170,660,828
JBrowse link
G Tdrd6 tudor domain containing 6 involved_in ISO (PMID:28263986) RGD PMID:28263986 NCBI chr 9:17,344,033...17,359,348
Ensembl chr 9:17,344,026...17,359,344
JBrowse link
G Tssc4 tumor suppressing subtransferable candidate 4 involved_in ISO
ISS
(PMID:35188580)
GO_REF:0000024
RGD
UniProt
PMID:35188580 GO_REF:0000024 NCBI chr 1:198,251,986...198,254,810
Ensembl chr 1:198,235,487...198,254,980
JBrowse link
G Zfp341 zinc finger protein 341 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:143,122,699...143,156,250
Ensembl chr 3:143,119,093...143,156,249
JBrowse link
spliceosomal tri-snRNP complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aar2 AAR2 splicing factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:145,057,368...145,079,838
Ensembl chr 3:145,057,458...145,080,166
JBrowse link
G Linc00176 long intergenic non-protein coding RNA 176 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:168,771,350...168,775,133
Ensembl chr 3:168,704,299...168,774,991
JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:10523320) RGD PMID:10523320 NCBI chr20:3,843,467...3,847,217
Ensembl chr20:3,843,466...3,847,266
JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:20595234)
UniProt
Ensembl
RGD
PMID:20595234 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662
JBrowse link
G Prpf3 pre-mRNA processing factor 3 involved_in ISO (PMID:20595234) RGD PMID:20595234 NCBI chr 2:183,379,041...183,403,526
Ensembl chr 2:183,378,718...183,403,489
JBrowse link
G Prpf31 pre-mRNA processing factor 31 acts_upstream_of_or_within
involved_in
ISO (PMID:11867543)
(PMID:15257298), (PMID:20118938)
RGD PMID:11867543 PMID:15257298 PMID:20118938 NCBI chr 1:65,575,887...65,587,561
Ensembl chr 1:65,575,887...65,587,873
JBrowse link
G Prpf4b pre-mRNA processing factor 4B involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:20118938)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20118938 GO_REF:0000024 GO_REF:0000107 NCBI chr17:29,985,343...30,020,285
Ensembl chr17:29,985,343...30,019,625
JBrowse link
G Prpf6 pre-mRNA processing factor 6 involved_in IEA
ISO
ISS
IBA
GO_REF:0000107
(PMID:15257298), (PMID:20118938)
GO_REF:0000024
GO_REF:0000033
Ensembl
RGD
UniProt
GO_Central
PMID:15257298 PMID:20118938 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:168,706,952...168,771,191
Ensembl chr 3:168,704,299...168,774,991
JBrowse link
G Prpf8 pre-mRNA processing factor 8 involved_in ISO
IBA
(PMID:20595234)
GO_REF:0000033
RGD
GO_Central
PMID:20595234 GO_REF:0000033 NCBI chr10:60,331,494...60,354,606
Ensembl chr10:60,331,494...60,354,606
JBrowse link
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein involved_in ISO (PMID:12032085), (PMID:20595234) RGD PMID:12032085 PMID:20595234 NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
JBrowse link
G Tssc4 tumor suppressing subtransferable candidate 4 involved_in ISO
IEA
ISS
(PMID:34131137)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:34131137 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:198,251,986...198,254,810
Ensembl chr 1:198,235,487...198,254,980
JBrowse link
G Usp4 ubiquitin specific peptidase 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:20595234)
UniProt
RGD
PMID:20595234 GO_REF:0000024 NCBI chr 8:109,035,402...109,079,382
Ensembl chr 8:109,036,099...109,080,427
JBrowse link
spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 involved_in ISO
IBA
IEA
(PMID:35241646)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:35241646 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:114,428,854...114,458,194
Ensembl chr 3:114,428,854...114,458,182
JBrowse link
spliceosome-depend formation of circular RNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ilf3 interleukin enhancer binding factor 3 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:28625552)
UniProt
Ensembl
RGD
PMID:28625552 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:19,922,409...19,960,495
Ensembl chr 8:19,922,460...19,960,350
JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:37272356)
GO_REF:0000107
(PMID:25768908)
UniProt
RGD
Ensembl
PMID:25768908 PMID:37272356 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831
JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in ISO (PMID:27531932)
(PMID:37272356)
RGD PMID:27531932 PMID:37272356 NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060
JBrowse link
U2-type prespliceosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx42 DEAD-box helicase 42 involved_in ISO (PMID:36797247) RGD PMID:36797247 NCBI chr10:91,148,926...91,180,940
Ensembl chr10:91,148,254...91,180,939
JBrowse link
G Ddx46 DEAD-box helicase 46 involved_in ISS
ISO
GO_REF:0000024
(PMID:36797247)
UniProt
RGD
PMID:36797247 GO_REF:0000024 NCBI chr17:8,942,070...8,988,440
Ensembl chr17:8,944,454...8,988,439
JBrowse link
G Htatsf1 HIV-1 Tat specific factor 1 involved_in ISO (PMID:32494006), (PMID:34822310) RGD PMID:32494006 PMID:34822310 NCBI chr  X:134,935,426...134,949,607
Ensembl chr  X:134,935,426...134,949,607
JBrowse link
G Sf3a1 splicing factor 3A subunit 1 involved_in ISO (PMID:10882114), (PMID:11533230) RGD PMID:10882114 PMID:11533230 NCBI chr14:79,031,394...79,052,144
Ensembl chr14:79,031,394...79,052,144
JBrowse link
G Sf3a2 splicing factor 3A subunit 2 involved_in ISO
ISS
(PMID:11533230)
GO_REF:0000024
RGD
UniProt
PMID:11533230 GO_REF:0000024 NCBI chr 7:8,909,507...8,916,104
Ensembl chr 7:8,909,507...8,915,530
JBrowse link
G Sf3a3 splicing factor 3a, subunit 3 involved_in ISO (PMID:11533230) RGD PMID:11533230 NCBI chr 5:136,967,713...136,987,345
Ensembl chr 5:136,967,691...136,987,361
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20217
    cellular process 19275
      metabolic process 12045
        primary metabolic process 10671
          RNA processing 971
            mRNA processing 486
              mRNA splicing, via spliceosome 322
                alternative mRNA splicing, via spliceosome + 80
                mRNA cis splicing, via spliceosome + 29
                mRNA trans splicing, via spliceosome + 0
                negative regulation of mRNA splicing, via spliceosome + 25
                positive regulation of mRNA splicing, via spliceosome + 33
                regulation of mRNA splicing, via spliceosome + 114
                spliceosomal complex assembly + 55
                spliceosomal complex disassembly 2
                spliceosomal conformational changes to generate catalytic conformation + 6
                spliceosomal snRNP assembly + 51
                spliceosome-depend formation of circular RNA 3
Path 2
Term Annotations click to browse term
  biological_process 20217
    cellular process 19275
      metabolic process 12045
        primary metabolic process 10671
          nucleobase-containing compound metabolic process 5846
            nucleobase-containing compound biosynthetic process 4775
              nucleic acid biosynthetic process 4498
                RNA biosynthetic process 4381
                  RNA processing 971
                    RNA splicing 442
                      RNA splicing, via transesterification reactions 322
                        RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 322
                          mRNA splicing, via spliceosome 322
                            alternative mRNA splicing, via spliceosome + 80
                            mRNA cis splicing, via spliceosome + 29
                            mRNA trans splicing, via spliceosome + 0
                            negative regulation of mRNA splicing, via spliceosome + 25
                            positive regulation of mRNA splicing, via spliceosome + 33
                            regulation of mRNA splicing, via spliceosome + 114
                            spliceosomal complex assembly + 55
                            spliceosomal complex disassembly 2
                            spliceosomal conformational changes to generate catalytic conformation + 6
                            spliceosomal snRNP assembly + 51
                            spliceosome-depend formation of circular RNA 3
paths to the root