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ONTOLOGY REPORT - ANNOTATIONS


Term:polysaccharide catabolic process
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Accession:GO:0000272 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
Synonyms:exact_synonym: polysaccharide breakdown;   polysaccharide catabolism;   polysaccharide degradation
 narrow_synonym: multicellular organismal polysaccharide catabolic process
 alt_id: GO:0044244



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polysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chia chitinase, acidic involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:196,302,687...196,344,849 JBrowse link
G Chit1 chitinase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:48,117,886...48,165,645 JBrowse link
dextrin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mgam maltase-glucoamylase involved_in ISO (PMID:18036614) RGD PMID:18036614 NCBI chr 4:69,441,626...69,602,068 JBrowse link
glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of ISO MGI:2148638 (PMID:14581480) RGD PMID:14581480 NCBI chr10:28,255,025...28,373,418 JBrowse link
G Adrb1 adrenoceptor beta 1 IDA RGD PMID:17911346 RGD:5129142 NCBI chr 1:265,777,103...265,780,114 JBrowse link
G Agl amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase involved_in IMP
ISO
IBA
IDA
MGI:4432988|MGI:5661387 (PMID:24613482), (PMID:25092169)
GO_REF:0000033
RGD
GO_Central
PMID:24613482 PMID:25092169 PMID:9281456 PMID:6449198 PMID:11766064 More... GO_REF:0000033, RGD:1598779, RGD:1642743, RGD:2304191, RGD:1642741 NCBI chr 2:204,705,053...204,760,966 JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 acts_upstream_of_or_within ISO MGI:2387343 (PMID:10625614) RGD PMID:10625614 NCBI chr10:86,307,400...86,318,766 JBrowse link
G Gaa alpha glucosidase involved_in
acts_upstream_of_or_within
IMP
IBA
ISO
IDA
GO_REF:0000033
MGI:2148550|MGI:2179955|MGI:2179960|MGI:2179961 (PMID:10838256), (PMID:11328962), (PMID:11785984)
(PMID:29061980), (PMID:9505277)
GO_Central
RGD
PMID:9505277 PMID:10838256 PMID:11328962 PMID:11785984 PMID:29061980 More... GO_REF:0000033, RGD:1599504, RGD:1599506 NCBI chr10:104,529,673...104,546,836 JBrowse link
G Hmgb1 high mobility group box 1 acts_upstream_of ISO MGI:3530901 (PMID:10391216) RGD PMID:10391216 NCBI chr12:11,009,236...11,015,941 JBrowse link
G Pfkm phosphofructokinase, muscle involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4356541 (PMID:19696889)
Ensembl
RGD
PMID:19696889 GO_REF:0000107 NCBI chr 7:131,100,684...131,138,250 JBrowse link
G Pgm2 phosphoglucomutase 2 involved_in ISO (PMID:927504) RGD PMID:927504 NCBI chr14:44,166,314...44,199,828 JBrowse link
G Phkg2 phosphorylase kinase catalytic subunit gamma 2 involved_in ISO MGI:5629316 (PMID:34083142) RGD PMID:34083142 NCBI chr 1:191,614,738...191,627,615 JBrowse link
G Pygb glycogen phosphorylase B involved_in IDA
ISO
IBA
IEA
(PMID:32446205)
GO_REF:0000033
GO_REF:0000117
RGD
GO_Central
UniProt
PMID:32446205 PMID:16226229 PMID:11071367 PMID:10634496 GO_REF:0000033 GO_REF:0000117, RGD:1642804, RGD:2304126, RGD:1642809 NCBI chr 3:139,611,724...139,658,521 JBrowse link
G Pygl glycogen phosphorylase L involved_in IDA
ISO
IBA
MGI:4362669 (PMID:31701076), (PMID:36077341)
GO_REF:0000033
RGD
GO_Central
PMID:31701076 PMID:36077341 PMID:15152027 PMID:6449198 PMID:114169 GO_REF:0000033, RGD:1642805, RGD:1642743, RGD:2304128 NCBI chr 6:94,433,558...94,476,219 JBrowse link
G Pygm glycogen phosphorylase, muscle associated acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
IEA
(PMID:15282316), (PMID:17689562)
MGI:5696972 (PMID:31511858)
GO_REF:0000033
GO_REF:0000117
(PMID:1150650), (PMID:8316268)
RGD
GO_Central
UniProt
PMID:1150650 PMID:8316268 PMID:15282316 PMID:17689562 PMID:31511858 More... GO_REF:0000033 GO_REF:0000117, RGD:1599986, RGD:1642743, RGD:1599897, RGD:2304126, RGD:1642811 NCBI chr 1:203,690,550...203,705,369 JBrowse link
G Stbd1 starch binding domain 1 involved_in ISO
ISS
(PMID:20810658)
GO_REF:0000024
RGD
GO_Central
PMID:20810658 GO_REF:0000024 NCBI chr14:15,470,452...15,473,857 JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkm phosphofructokinase, muscle involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4356541 (PMID:19696889)
Ensembl
RGD
PMID:19696889 GO_REF:0000107 NCBI chr 7:131,100,684...131,138,250 JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg12 autophagy related 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:41,638,841...41,649,311 JBrowse link
G Atg2a autophagy related 2A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:203,542,559...203,562,242 JBrowse link
G Atg2b autophagy related 2B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:124,522,283...124,592,412 JBrowse link
G Atg3 autophagy related 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:55,624,914...55,653,249 JBrowse link
G Gaa alpha glucosidase involved_in IEA
ISO
GO_REF:0000107
MGI:2148550 (PMID:12739885)
Ensembl
RGD
PMID:12739885 GO_REF:0000107 NCBI chr10:104,529,673...104,546,836 JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 involved_in ISO (PMID:20810658) RGD PMID:20810658 NCBI chr 4:164,666,332...164,675,474 JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:13,161,648...13,225,560 JBrowse link
G Stbd1 starch binding domain 1 involved_in ISO
ISS
(PMID:20810658)
GO_REF:0000024
RGD
GO_Central
PMID:20810658 GO_REF:0000024 NCBI chr14:15,470,452...15,473,857 JBrowse link
G Wdr45 WD repeat domain 45 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:17,448,195...17,454,117 JBrowse link
G Wdr45b WD repeat domain 45B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:107,097,655...107,127,839 JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:95,042,451...95,079,679 JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:17,024,876...17,053,306 JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO MGI:2148638 (PMID:14581480) RGD PMID:14581480 NCBI chr10:28,255,025...28,373,418 JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:381941) RGD PMID:381941 NCBI chr 1:207,272,738...207,421,998 JBrowse link
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B involved_in ISO (PMID:22225877) RGD PMID:22225877 NCBI chr16:56,830,011...56,842,395 JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 IMP RGD PMID:22998876 RGD:329412477 NCBI chr13:77,747,752...77,833,952 JBrowse link
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO MGI:2148638 (PMID:14581480) RGD PMID:14581480 NCBI chr10:28,255,025...28,373,418 JBrowse link
G Avpr1a arginine vasopressin receptor 1A involved_in NAS PMID:1560825 UniProt PMID:1560825 RGD:1298691 NCBI chr 7:59,999,743...60,003,667 JBrowse link
G Hmgb1 high mobility group box 1 acts_upstream_of_or_within ISO MGI:3530901 (PMID:10391216) RGD PMID:10391216 NCBI chr12:11,009,236...11,015,941 JBrowse link
G Phka1 phosphorylase kinase regulatory subunit alpha 1 involved_in ISO (PMID:33799212) RGD PMID:33799212 NCBI chr  X:67,601,302...67,738,504 JBrowse link
G Phkb phosphorylase kinase regulatory subunit beta involved_in ISO (PMID:36077341) RGD PMID:36077341 NCBI chr19:21,013,719...21,210,671 JBrowse link
G Phkg2 phosphorylase kinase catalytic subunit gamma 2 involved_in ISO
IMP
MGI:5629316 (PMID:34083142)
PMID:6615485
RGD PMID:34083142 PMID:6615485 RGD:405650328 NCBI chr 1:191,614,738...191,627,615 JBrowse link
regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp1ca protein phosphatase 1 catalytic subunit alpha IDA RGD PMID:7720853 RGD:2304267 NCBI chr 1:210,914,576...210,918,193 JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta IDA RGD PMID:7720853 RGD:2304267 NCBI chr 6:29,681,099...29,712,835 JBrowse link
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B IDA RGD PMID:7720853 PMID:11716774 RGD:2304267, RGD:2306167 NCBI chr16:56,830,011...56,842,395 JBrowse link
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C IDA RGD PMID:11716774 RGD:2306167 NCBI chr 1:243,873,524...243,878,527 JBrowse link
G Ppp1r3d protein phosphatase 1, regulatory subunit 3D IDA RGD PMID:11716774 RGD:2306167 NCBI chr 3:165,502,384...165,505,455 JBrowse link
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E IDA RGD PMID:15752363 RGD:2306166 NCBI chr15:32,318,435...32,319,595 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20534
    cellular process 19523
      metabolic process 12157
        catabolic process 2918
          macromolecule catabolic process 1678
            polysaccharide catabolic process 37
              alginic acid catabolic process 0
              alpha-linked polysaccharide catabolism to maltopentaose 0
              alpha-linked polysaccharide catabolism to maltotriose 0
              arabinan catabolic process 0
              cell septum edging catabolic process 0
              cell wall polysaccharide catabolic process + 0
              fructan catabolic process + 0
              galactoglucomannan catabolic process + 0
              galactomannan catabolic process + 0
              glucan catabolic process + 35
              glucomannan catabolic process + 0
              glycolysis from storage polysaccharide through glucose-1-phosphate 1
              homogalacturonan catabolic process 0
              mannogen catabolic process 0
              pectin catabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 20534
    cellular process 19523
      metabolic process 12157
        primary metabolic process 10741
          carbohydrate metabolic process 650
            carbohydrate catabolic process 242
              polysaccharide catabolic process 37
                alginic acid catabolic process 0
                alpha-linked polysaccharide catabolism to maltopentaose 0
                alpha-linked polysaccharide catabolism to maltotriose 0
                arabinan catabolic process 0
                cell septum edging catabolic process 0
                cell wall polysaccharide catabolic process + 0
                fructan catabolic process + 0
                galactoglucomannan catabolic process + 0
                galactomannan catabolic process + 0
                glucan catabolic process + 35
                glucomannan catabolic process + 0
                glycolysis from storage polysaccharide through glucose-1-phosphate 1
                homogalacturonan catabolic process 0
                mannogen catabolic process 0
                pectin catabolic process + 0
paths to the root