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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Wiskott-Aldrich syndrome
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Accession:DOID:9169 term browser browse the term
Definition:A syndrome that is characterized by abnormal immune system function and a reduced ability to form blood clots resulting from a decrease in the number and size of blood cell fragments involved in clotting (microthrombocytopenia). (DO)
Synonyms:exact_synonym: Aldrich syndrome;   IMD2;   WAS;   WAS1;   Wiskott syndrome;   Wiskott-Aldrich syndrome 1;   eczema-thrombocytopenia-immunodeficiency syndrome;   eczema-thrombocytopenia-immunodeficiency syndromes;   immunodeficiency 2
 narrow_synonym: Wiskott-Aldrich syndrome, attenuated
 xref: EFO:0003903;   ICD10CM:D82.0;   ICD9CM:279.12;   MESH:D014923;   MIM:301000;   MONDO:0010518;   NCI:C3448


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Wiskott-Aldrich syndrome term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap4 A-kinase anchoring protein 4 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:15,435,391...15,445,684 JBrowse link
G Bmp15 bone morphogenetic protein 15 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:16,169,123...16,174,187 JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,868,096...14,896,413 JBrowse link
G Ccdc120 coiled-coil domain containing 120 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,753,594...14,772,745 JBrowse link
G Ccdc22 coiled-coil domain containing 22 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,898,296...14,910,244 JBrowse link
G Ccnb3 cyclin B3 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:18,149,915...18,214,801 JBrowse link
G Clcn5 chloride voltage-gated channel 5 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:17,857,260...18,011,844 JBrowse link
G Dgkk diacylglycerol kinase kappa ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:18,253,849...18,385,805 JBrowse link
G Ebp EBP, cholestenol delta-isomerase ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,299,427...14,305,826 JBrowse link
G Eras ES cell expressed Ras ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,573,987...14,578,455 JBrowse link
G Foxp3 forkhead box P3 ISS
ISO		 OMIM:301000 | OMIM:614493
ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1		 MouseDO
ClinVar		 PMID:28492532 NCBI chr  X:17,580,380...17,601,181 JBrowse link
G Gata1 GATA binding protein 1 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,529,706...14,537,530 JBrowse link
G Glod5 glyoxalase domain containing 5 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,473,994...14,488,797 JBrowse link
G Gpkow G patch domain and KOW motifs ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,791,601...14,806,384 JBrowse link
G Gripap1 GRIP1 associated protein 1 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,678,896...14,708,747 JBrowse link
G Hdac6 histone deacetylase 6 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,550,645...14,572,445 JBrowse link
G Kcnd1 potassium voltage-gated channel subfamily D member 1 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,661,688...14,678,745 JBrowse link
G Magix MAGI family member, X-linked ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,824,114...14,832,466 JBrowse link
G Mir500 microRNA 500 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:15,258,778...15,258,857 JBrowse link
G Mir532 microRNA 532 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:15,247,315...15,247,393 JBrowse link
G Nudt11 nudix hydrolase 11 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:16,326,775...16,333,396 JBrowse link
G Otud5 OTU deubiquitinase 5 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,626,173...14,659,331 JBrowse link
G Pcsk1n proprotein convertase subtilisin/kexin type 1 inhibitor ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,580,036...14,583,478 JBrowse link
G Pim2 Pim-2 proto-oncogene, serine/threonine kinase ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:17,289,509...17,294,778 JBrowse link
G Plp2 proteolipid protein 2 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,834,249...14,837,648 JBrowse link
G Porcn porcupine O-acyltransferase ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,285,864...14,298,481 JBrowse link
G Ppp1r3f protein phosphatase 1, regulatory subunit 3F ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,915,740...14,945,249 JBrowse link
G Pqbp1 polyglutamine binding protein 1 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,603,516...14,608,091 JBrowse link
G Praf2 PRA1 domain family, member 2 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,773,398...14,776,035 JBrowse link
G Prickle3 prickle planar cell polarity protein 3 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,837,647...14,849,305 JBrowse link
G Rbm3 RNA binding motif protein 3 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,348,909...14,352,387 JBrowse link
G Shroom4 shroom family member 4 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:15,869,065...16,076,850 JBrowse link
G Slc35a2 solute carrier family 35 member A2 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,608,145...14,616,937 JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:17,093,059...17,105,942 JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:146,828,818...146,831,485 JBrowse link
G Syp synaptophysin ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:17,521,348...17,536,449 JBrowse link
G Tbc1d25 TBC1 domain family, member 25 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,314,095...14,339,171 JBrowse link
G Tfe3 transcription factor binding to IGHM enhancer 3 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,729,547...14,742,830 JBrowse link
G Timm17b translocase of inner mitochondrial membrane 17b ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,596,330...14,603,491 JBrowse link
G Usp27x ubiquitin specific peptidase 27, X-linked ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:15,123,620...15,126,855 JBrowse link
G Was WASP actin nucleation promoting factor ISO
ISS		 CTD Direct Evidence: marker/mechanism
OMIM:301000
ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 | ClinVar Annotator: match by term: Wiskott-Aldrich syndrome | ClinVar Annotator: match by term: Wiskott-Aldrich syndrome, attenuated		 OMIM
CTD
MouseDO
ClinVar
RGD		 PMID:2906042 PMID:3284030 PMID:7579329 PMID:7579347 PMID:7735919 More... RGD:1599803 NCBI chr  X:17,077,057...17,085,802 JBrowse link
G Washc4 WASH complex subunit 4 ISS OMIM:301000 MouseDO NCBI chr 7:20,187,905...20,240,228 JBrowse link
G Wdr13 WD repeat domain 13 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:14,362,484...14,373,727 JBrowse link
G Wdr45 WD repeat domain 45 ISO ClinVar Annotator: match by term: WISKOTT-ALDRICH SYNDROME 1 ClinVar PMID:28492532 NCBI chr  X:17,448,195...17,454,117 JBrowse link
G Wipf1 WAS/WASL interacting protein family, member 1 ISO CTD Direct Evidence: marker/mechanism CTD NCBI chr 3:78,721,486...78,824,199 JBrowse link
G Wrn WRN RecQ like helicase ISO ClinVar Annotator: match by term: Wiskott-Aldrich syndrome ClinVar PMID:10069711 PMID:10220139 PMID:16786514 PMID:18414213 PMID:19824023 More... NCBI chr16:65,466,552...65,602,951 JBrowse link
Wiskott-Aldrich Syndrome 2 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna1 cholinergic receptor nicotinic alpha 1 subunit ISO ClinVar Annotator: match by term: Wiskott-Aldrich syndrome 2 ClinVar PMID:28492532 NCBI chr 3:78,862,286...78,877,353 JBrowse link
G Wipf1 WAS/WASL interacting protein family, member 1 ISO ClinVar Annotator: match by term: Wiskott-Aldrich syndrome 2 OMIM
ClinVar		 PMID:9536098 PMID:17576681 PMID:22231303 PMID:24033266 PMID:25741868 More... NCBI chr 3:78,721,486...78,824,199 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 19139
    syndrome 11370
      primary immunodeficiency disease 4431
        lymphopenia 109
          Wiskott-Aldrich syndrome 47
            Wiskott-Aldrich Syndrome 2 2
            Wiskott-Aldrich Syndrome, Autosomal Dominant Form 0
Path 2
Term Annotations click to browse term
  disease 19139
    Developmental Disease 14664
      Congenital, Hereditary, and Neonatal Diseases and Abnormalities 13712
        genetic disease 13378
          monogenic disease 10931
            X-linked monogenic disease 1455
              X-linked recessive disease 871
                Wiskott-Aldrich syndrome 47
                  Wiskott-Aldrich Syndrome 2 2
                  Wiskott-Aldrich Syndrome, Autosomal Dominant Form 0
paths to the root