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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Urachal Cyst
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Accession:DOID:9008957 term browser browse the term
Definition:Cyst occurring in a persistent portion of the urachus, presenting as an extraperitoneal mass in the umbilical region. It is characterized by abdominal pain, and fever if infected. It may rupture, leading to peritonitis, or it may drain through the umbilicus.
Synonyms:exact_synonym: Umbilical Cyst;   Umbilical Cysts;   Urachal Cysts
 primary_id: MESH:D014496


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Urachal Cyst term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xdh xanthine dehydrogenase ISO ClinVar Annotator: match by term: Urachal cyst ClinVar PMID:25741868 PMID:28492532 PMID:30755392 NCBI chr 6:21,530,463...21,592,172
Ensembl chr 6:21,530,113...21,592,268 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 19055
    disease of cellular proliferation 7785
      Cysts 300
        Urachal Cyst 1
          Benign Non-Infected Urachal Cyst 0
Path 2
Term Annotations click to browse term
  disease 19055
    Pathological Conditions, Signs and Symptoms 13535
      Anatomical Pathological Conditions 2745
        Cysts 300
          Urachal Cyst 1
            Benign Non-Infected Urachal Cyst 0
paths to the root