RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term: Craniocerebral Trauma
Accession: DOID:9007621
browse the term
Definition: Traumatic injuries involving the cranium and intracranial structures (i.e., BRAIN; CRANIAL NERVES; MENINGES; and other structures). Injuries may be classified by whether or not the skull is penetrated (i.e., penetrating vs. nonpenetrating) or whether there is an associated hemorrhage.
Synonyms: exact_synonym: Craniocerebral Injuries; Craniocerebral Injury; Craniocerebral Traumas; Crushing Skull Injuries; Crushing Skull Injury; Forehead Trauma; Forehead Traumas; Frontal Region Trauma; Frontal Region Traumas; Head Injuries; Head Injury; Head Trauma; Head Traumas; Minor Head Injuries; Minor Head Injury; Multiple Head Injuries; Multiple Head Injury; Occipital Region Trauma; Occipital Region Traumas; Occipital Trauma; Occipital Traumas; Open Head Injuries; Open Head Injury; Parietal Region Trauma; Parietal Region Traumas; Superficial Head Injuries; Superficial Head Injury; Temporal Region Trauma; Temporal Region Traumas
primary_id: MESH:D006259 ; RDO:0005059
xref: EFO:0009505
G
ADNP
activity dependent neuroprotector homeobox
ISO
RGD
PMID:11123362
RGD:2312784
NCBI chr17:52,316,388...52,350,732
Ensembl chr17:52,317,913...52,332,079
G
IL1A
interleukin 1 alpha
ISO
protein:increased expression:microglial cell
RGD
PMID:7830934
RGD:10045949
NCBI chr 3:43,718,320...43,731,668
Ensembl chr 3:43,718,368...43,731,121
G
POSTN
periostin
ISO
RGD
PMID:17878602
RGD:10041014
NCBI chr11:13,225,183...13,258,973
Ensembl chr11:13,224,959...13,258,978
G
SERPINC1
serpin family C member 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:8810955
NCBI chr 9:116,181,988...116,193,100
Ensembl chr 9:116,181,670...116,193,201
G
EPO
erythropoietin
treatment
ISO
RGD
PMID:23415790
RGD:10401075
NCBI chr 3:8,620,508...8,622,936
Ensembl chr 3:8,620,508...8,622,936
G
F7
coagulation factor VII
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:12503044
NCBI chr11:78,512,389...78,518,668
Ensembl chr11:78,512,137...78,518,668
G
KCNN4
potassium calcium-activated channel subfamily N member 4
treatment
ISO
RGD
PMID:15379997
RGD:329969897
NCBI chr 6:50,580,016...50,593,518
Ensembl chr 6:50,580,022...50,593,544
G
CFL1
cofilin 1
treatment
ISO
RGD
PMID:25708984
RGD:12738361
NCBI chr 2:6,471,558...6,475,019
Ensembl chr 2:6,469,254...6,475,035
G
DRD2
dopamine receptor D2
ISO
RGD
PMID:26448536
RGD:13506960
NCBI chr 9:41,068,618...41,135,262
Ensembl chr 9:41,068,779...41,133,599
G
DRD3
dopamine receptor D3
ISO
RGD
PMID:26448536
RGD:13506960
NCBI chr13:145,769,294...145,817,997
Ensembl chr13:145,771,774...145,819,168
G
DRD4
dopamine receptor D4
ISO
RGD
PMID:26448536
RGD:13506960
NCBI chr 2:398,766...401,539
Ensembl chr 2:398,766...402,433
G
IL6
interleukin 6
treatment
ISO
RGD
PMID:27113205
RGD:11062140
NCBI chr 9:91,506,421...91,510,830
Ensembl chr 9:91,506,421...91,511,263
G
C3
complement C3
ameliorates
ISO
RGD
PMID:31654641
RGD:408418727
NCBI chr 2:72,431,470...72,471,622
Ensembl chr 2:72,431,212...72,472,228
G
CASP3
caspase 3
treatment
ISO
RGD
PMID:28140659
RGD:13782305
NCBI chr15:45,744,320...45,753,252
Ensembl chr15:45,742,751...45,764,213
G
CASP8
caspase 8
treatment
ISO
RGD
PMID:28140659
RGD:13782305
NCBI chr15:104,923,659...104,948,470
Ensembl chr15:104,923,953...104,948,468
G
LOC110258578
interleukin-1 beta-like
treatment
ISO
RGD
PMID:31654641
RGD:408418727
G
PYCARD
PYD and CARD domain containing
treatment
ISO
RGD
PMID:19401709
RGD:5491174
NCBI chr 3:17,305,921...17,307,521
Ensembl chr 3:17,306,099...17,307,786
G
TNF
tumor necrosis factor
treatment
ISO
RGD
PMID:31654641
RGD:408418727
NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,628...23,702,415
G
ABCC8
ATP binding cassette subfamily C member 8
treatment
ISO
RGD
PMID:21107131
RGD:12791995
NCBI chr 2:41,666,974...41,754,624
Ensembl chr 2:41,666,909...41,754,620
G
ACAN
aggrecan
ISO
mRNA:increased expression:fascia dentata (rat)
RGD
PMID:18511192
RGD:2315807
NCBI chr 7:54,449,830...54,520,606
Ensembl chr 7:54,449,816...54,519,194
G
ACTR2
actin related protein 2
ISO
mRNA, protein:decreased expression:hippocampus (rat)
RGD
PMID:22120305
RGD:11530046
NCBI chr 3:76,691,275...76,729,269
Ensembl chr 3:76,691,280...76,729,252
G
ADCYAP1
adenylate cyclase activating polypeptide 1
ISO
RGD
PMID:16689670
RGD:2325298
NCBI chr 6:105,414,628...105,422,294
Ensembl chr 6:105,414,631...105,422,294
G
ADRA1A
adrenoceptor alpha 1A
ISO
mRNA:increased expression:frontal cortex
RGD
PMID:20974230
RGD:5688366
NCBI chr14:10,623,391...10,733,378
Ensembl chr14:10,626,293...10,733,068
G
AGER
advanced glycosylation end-product specific receptor
ISO
protein:increased expression:brain (rat)
RGD
PMID:22491548 PMID:22915134 PMID:24859607
RGD:7245513 RGD:7245557 RGD:8696001
NCBI chr 7:24,218,116...24,221,162
Ensembl chr 7:24,218,120...24,221,162
G
AIF1
allograft inflammatory factor 1
ISO
protein:increased expression:cerebral cortex (rat)
RGD
PMID:19520144
RGD:2313020
NCBI chr 7:23,711,752...23,731,191
Ensembl chr 7:23,728,726...23,731,675
G
AIFM1
apoptosis inducing factor mitochondria associated 1
ISO
protein:increased expression:nucleus:
RGD
PMID:12091479
RGD:10053567
NCBI chr X:106,676,596...106,708,290
Ensembl chr X:106,670,520...106,708,317
G
AKT1
AKT serine/threonine kinase 1
ISO
protein:increased phosphorylation:brain, neuron
RGD
PMID:16234845
RGD:5509090
G
ALB
albumin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:7909931 PMID:17188501
NCBI chr 8:69,643,427...69,663,152
Ensembl chr 8:69,531,487...69,721,696
G
AMBP
alpha-1-microglobulin/bikunin precursor
ISO
protein:increased expression:urine
RGD
PMID:14592616
RGD:6904155
NCBI chr 1:254,683,885...254,703,220
Ensembl chr 1:254,683,891...254,703,225
G
ANK3
ankyrin 3
ISO
RGD
PMID:20557305
RGD:6767288
NCBI chr14:63,416,154...63,809,220
Ensembl chr14:63,416,161...64,194,128
G
ANP32A
acidic nuclear phosphoprotein 32 family member A
ISO
RGD
PMID:24385964
RGD:10401136
NCBI chr 1:166,664,251...166,703,814
G
APAF1
apoptotic peptidase activating factor 1
ISO
protein:increased expression:cerebral cortex
RGD
PMID:11567033
RGD:2325751
NCBI chr 5:85,166,616...85,258,751
Ensembl chr 5:85,166,628...85,258,364
G
APBB1
amyloid beta precursor protein binding family B member 1
ISO
mRNA:increased expression:brain
RGD
PMID:12707777
RGD:2301208
NCBI chr 9:3,303,032...3,323,828
Ensembl chr 9:3,303,112...3,324,037
G
APEX1
apurinic/apyrimidinic endodeoxyribonuclease 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:11447995
NCBI chr 7:78,451,845...78,454,938
Ensembl chr 7:78,451,851...78,454,938
G
APOD
apolipoprotein D
ISO
mRNA, protein:increased expression:cerebral cortex, glia cell, neuron
RGD
PMID:10501208
RGD:2311202
NCBI chr13:132,514,546...132,562,594
Ensembl chr13:132,514,949...132,562,599
G
APP
amyloid beta precursor protein
ISO
protein:increased expression:hippocampus
RGD
PMID:16300758
RGD:10054281
NCBI chr13:189,434,854...189,716,120
Ensembl chr13:189,435,094...189,716,056
G
AQP4
aquaporin 4
ISO
protein:increased expression:cerebral cortex
RGD
PMID:21083433 PMID:21488209
RGD:5148014 RGD:5148034
NCBI chr 6:111,407,632...111,422,169
Ensembl chr 6:111,407,639...111,422,109
G
ASIC1
acid sensing ion channel subunit 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21307247
NCBI chr 5:15,965,082...15,991,291
Ensembl chr 5:15,965,084...15,991,876
G
ASTN1
astrotactin 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:14499481
NCBI chr 9:118,649,144...118,969,032
Ensembl chr 9:118,646,910...118,968,970
G
ATG12
autophagy related 12
ISO
protein:altered localization:brain
RGD
PMID:18059433
RGD:2301217
NCBI chr 2:119,948,443...119,965,702
Ensembl chr 2:119,941,997...119,965,696
G
ATP5PD
ATP synthase peripheral stalk subunit d
treatment
ISO
RGD
PMID:26813465
RGD:13800884
NCBI chr12:6,241,467...6,247,344
G
AVPR1A
vasopressin receptor 1A
ISO
mRNA:increased expression:cerebral cortex
RGD
PMID:17244947
RGD:2300372
NCBI chr 5:27,824,991...27,832,794
Ensembl chr 5:27,824,992...27,832,703
G
BAD
BCL2 associated agonist of cell death
ISO
mRNA, protein:increased expression:cerebral cortex
RGD
PMID:15941375
RGD:2292694
NCBI chr 2:7,831,192...7,842,864
Ensembl chr 2:7,830,920...7,842,863
G
BAX
BCL2 associated X, apoptosis regulator
treatment
ISO
RGD
PMID:20888848
RGD:10054247
NCBI chr 6:54,222,341...54,228,150
Ensembl chr 6:54,222,336...54,228,147
G
BCAT1
branched chain amino acid transaminase 1
ISO
Protein:increased expression:neurons
RGD
PMID:10686349
RGD:631308
NCBI chr 5:48,814,212...48,925,632
Ensembl chr 5:48,814,313...48,925,973
G
BCL2
BCL2 apoptosis regulator
treatment
ISO
RGD
PMID:18093155 PMID:20888848
RGD:10054247 RGD:2293059
NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,337,522...158,518,879
G
BDNF
brain derived neurotrophic factor
ISO
CTD Direct Evidence: marker/mechanism|therapeutic
RGD CTD
PMID:15500971 PMID:20544832 PMID:21269288
RGD:4891136
NCBI chr 2:32,623,668...32,679,293
Ensembl chr 2:32,624,048...32,679,765
G
BECN1
beclin 1
ISO
protein:increased expression:hippocampus CTD Direct Evidence: therapeutic protein:increased expression:brain protein:increased expression:neuron, astrocyte
RGD CTD
PMID:16874043 PMID:18500386 PMID:24221859 PMID:34929507
RGD:11558018 RGD:6483098 RGD:6483314
NCBI chr12:20,041,914...20,054,249
Ensembl chr12:20,041,956...20,054,373
G
BIRC5
baculoviral IAP repeat containing 5
ISO
mRNA, protein:increased expression:brain, astrocyte, neuron
RGD
PMID:15453988
RGD:2293136
NCBI chr12:3,747,276...3,755,214
Ensembl chr12:3,747,279...3,755,215
G
BMP6
bone morphogenetic protein 6
ISO
protein:increased expression:brain, astrocyte, neuron
RGD
PMID:16388909
RGD:2289020
NCBI chr 7:5,058,817...5,208,868
Ensembl chr 7:5,058,817...5,210,270
G
BMPR2
bone morphogenetic protein receptor type 2
ISO
mRNA:increased expression:dentate gyrus, neuron
RGD
PMID:9080432
RGD:5129488
NCBI chr15:105,971,577...106,132,496
Ensembl chr15:105,970,428...106,135,730
G
BYSL
bystin like
ISO
mRNA, protein:increased expression:substantia nigra, striatum (rat)
RGD
PMID:15305856
RGD:2316201
NCBI chr 7:37,074,517...37,086,753
Ensembl chr 7:37,074,515...37,088,533
G
C1QA
complement C1q A chain
ISO
RGD
PMID:23808389
RGD:10054313
NCBI chr 6:80,586,259...80,589,213
Ensembl chr 6:80,586,280...80,589,204
G
C3
complement C3
ISO
RGD
PMID:23808389
RGD:10054313
NCBI chr 2:72,431,470...72,471,622
Ensembl chr 2:72,431,212...72,472,228
G
CASK
calcium/calmodulin dependent serine protein kinase
ISO
RGD
PMID:25089700
RGD:11576302
NCBI chr X:37,166,973...37,535,723
Ensembl chr X:37,167,577...37,536,160
G
CASP1
caspase 1, apoptosis-related cysteine peptidase
ISO
mRNA, protein:increased expression:brain
RGD
PMID:17188500
RGD:2315917
NCBI chr 9:35,188,066...35,199,364
Ensembl chr 9:35,186,420...35,200,328
G
CASP3
caspase 3
treatment
ISO
RGD
PMID:20888848
RGD:10054247
NCBI chr15:45,744,320...45,753,252
Ensembl chr15:45,742,751...45,764,213
G
CASP8
caspase 8
ISO
protein:altered localization
RGD
PMID:15590916
RGD:1624191
NCBI chr15:104,923,659...104,948,470
Ensembl chr15:104,923,953...104,948,468
G
CAST
calpastatin
severity
ISO
mRNA:increased expression:cerebral cortex
RGD
PMID:15307896
RGD:5509821
NCBI chr 2:103,255,738...103,378,623
Ensembl chr 2:103,255,750...103,378,623
G
CCL2
chemokine (C-C motif) ligand 2
treatment
ISO
CTD Direct Evidence: marker/mechanism protein:increased expression:brain, neuron
CTD RGD
PMID:11113322 PMID:19210118 PMID:21549006
RGD:2306999 RGD:9587789
NCBI chr12:40,798,109...40,800,013
Ensembl chr12:40,798,109...40,800,026
G
CCL20
C-C motif chemokine ligand 20
treatment
ISO
RGD
PMID:22040257
RGD:7483630
NCBI chr15:129,172,743...129,176,069
G
CCR5
C-C motif chemokine receptor 5
ISO
mRNA:increased expression:hippocampus
RGD
PMID:24344922
RGD:8552265
NCBI chr13:29,382,383...29,387,902
Ensembl chr13:29,383,303...29,387,895
G
CD14
CD14 molecule
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr 2:142,348,036...142,349,686
Ensembl chr 2:142,346,360...142,349,581
G
CD40
CD40 molecule
treatment
ISO
RGD
PMID:23924471
RGD:7248749
NCBI chr17:48,286,116...48,298,188
Ensembl chr17:48,286,029...48,298,528
G
CD40LG
CD40 ligand
treatment
ISO
RGD
PMID:11755016 PMID:25972624
RGD:11344972 RGD:8547803
NCBI chr X:111,778,666...111,788,901
Ensembl chr X:111,778,493...111,789,709
G
CDKN1A
cyclin dependent kinase inhibitor 1A
ISO
protein:increased expression:nucleus:
RGD
PMID:9914434
RGD:8662346
NCBI chr 7:32,354,776...32,363,771
Ensembl chr 7:32,354,672...32,363,761
G
CDKN1B
cyclin dependent kinase inhibitor 1B
ISO
protein:decreased expression:cerebral cortex
RGD
PMID:21728064
RGD:10045359
NCBI chr 5:59,731,224...59,735,831
Ensembl chr 5:59,731,206...59,735,831
G
CEBPA
CCAAT enhancer binding protein alpha
ISO
mRNA, protein:increased expression:cerebral cortex (mouse)
RGD
PMID:19833158
RGD:10401206
NCBI chr 6:43,083,200...43,085,884
Ensembl chr 6:43,083,207...43,085,836
G
CEBPB
CCAAT enhancer binding protein beta
ISO
CTD Direct Evidence: marker/mechanism mRNA, protein:increased expression:cerebral cortex (mouse)
CTD RGD
PMID:19833158 PMID:21549006
RGD:10401206
NCBI chr17:51,722,633...51,723,673
Ensembl chr17:51,722,426...51,724,305
G
CFB
complement factor B
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17474994
NCBI chr 7:24,034,077...24,040,523
Ensembl chr 7:24,034,332...24,041,179
G
CFP
complement factor properdin
ISO
RGD
PMID:15362724
RGD:7488910
NCBI chr X:42,157,980...42,174,964
Ensembl chr X:42,157,988...42,174,951
G
CHRM2
cholinergic receptor muscarinic 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr18:12,455,139...12,600,314
Ensembl chr18:12,455,145...12,600,186
G
CHRNA7
cholinergic receptor nicotinic alpha 7 subunit
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 1:142,803,697...142,937,124
Ensembl chr 1:142,803,701...142,937,123
G
CLEC4E
C-type lectin domain family 4 member E
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr 5:63,219,229...63,228,566
G
CNP
2',3'-cyclic nucleotide 3' phosphodiesterase
ISO
protein:increased expression:hippocampus
RGD
PMID:20215974
RGD:6483336
NCBI chr12:20,758,081...20,765,655
Ensembl chr12:20,758,083...20,765,553
G
COMT
catechol-O-methyltransferase
ISO
protein:increased expression:hippocampus
RGD
PMID:17240060
RGD:2289740
NCBI chr14:51,384,729...51,403,997
Ensembl chr14:51,385,738...51,403,998
G
CRP
C-reactive protein, pentraxin-related
disease_progression
ISO
RGD
PMID:24456846
RGD:9585646
NCBI chr 4:90,793,361...90,801,020
Ensembl chr 4:90,793,350...90,805,218
G
CSF2
colony stimulating factor 2
disease_progression
ISO
RGD
PMID:21515263
RGD:5686795
NCBI chr 2:134,354,724...134,357,155
Ensembl chr 2:134,354,724...134,357,155
G
CSF3
colony stimulating factor 3
treatment
ISO
CTD Direct Evidence: marker/mechanism
CTD RGD
PMID:21549006 PMID:24239694
RGD:11039431
NCBI chr12:22,333,445...22,335,949
Ensembl chr12:22,333,449...22,338,753
G
CSPG4
chondroitin sulfate proteoglycan 4
ISO
protein:altered expression:cerebral cortex
RGD
PMID:19473238
RGD:5686860
NCBI chr 7:57,949,182...57,988,602
Ensembl chr 7:57,949,455...57,988,335
G
CUL5
cullin 5
ISO
mRNA, protein:decreased expression:cerebral cortex, hippocampus
RGD
PMID:17010517
RGD:2301432
NCBI chr 9:36,419,806...36,507,681
Ensembl chr 9:36,419,881...36,507,667
G
CXCL10
C-X-C motif chemokine ligand 10
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr 8:71,693,641...71,695,948
Ensembl chr 8:71,693,339...71,695,948
G
CXCL2
chemokine (C-X-C motif) ligand 2
ISO
protein:increased expression:brain, neuron
RGD
PMID:19210118
RGD:2306999
NCBI chr 8:70,157,253...70,159,145
Ensembl chr 8:70,157,214...70,159,138
G
CYP11A1
cytochrome P450 family 11 subfamily A member 1
ISO
mRNA:increased expression:hindbrain
RGD
PMID:16329132
RGD:1599699
NCBI chr 7:59,172,829...59,188,479
Ensembl chr 7:59,175,758...59,188,478
G
DAB2
DAB adaptor protein 2
ISO
RGD
PMID:15774263
RGD:7243841
NCBI chr16:24,590,638...24,776,937
Ensembl chr16:24,590,645...24,646,122
G
DNMT1
DNA methyltransferase 1
ISO
RGD
PMID:19429151
RGD:9588608
NCBI chr 2:68,981,564...69,040,364
Ensembl chr 2:68,981,566...69,029,844
G
DPYSL2
dihydropyrimidinase like 2
ISO
protein:increased degradation:cerebral cortex, hippocampus
RGD
PMID:17402852
RGD:2303056
NCBI chr14:10,428,598...10,545,705
Ensembl chr14:10,427,957...10,545,704
G
DRD2
dopamine receptor D2
ISO
RGD
PMID:18509630
RGD:2311580
NCBI chr 9:41,068,618...41,135,262
Ensembl chr 9:41,068,779...41,133,599
G
DUSP5
dual specificity phosphatase 5
ISO
mRNA:increased expression:cerebral cortex
RGD
PMID:12503083
RGD:2317873
NCBI chr14:120,906,340...120,919,398
Ensembl chr14:120,906,343...120,919,384
G
EIF2S1
eukaryotic translation initiation factor 2 subunit alpha
ISO
RGD
PMID:11526986
RGD:10395358
NCBI chr 7:91,085,025...91,109,835
Ensembl chr 7:91,085,335...91,109,827
G
ENO2
enolase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:34533065
NCBI chr 5:63,799,927...63,809,067
Ensembl chr 5:63,799,930...63,809,410
G
EPAS1
endothelial PAS domain protein 1
treatment
ISO
RGD
PMID:22960363
RGD:10395371
NCBI chr 3:94,167,759...94,253,662
Ensembl chr 3:94,165,816...94,254,079
G
EPHA4
EPH receptor A4
ISO
protein:increased expression, increased activity:astrocyte
RGD
PMID:22318127
RGD:5688763
NCBI chr15:123,350,867...123,501,872
Ensembl chr15:123,352,816...123,503,126
G
EPHX2
epoxide hydrolase 2
ISO
RGD
PMID:21075124
RGD:5688356
NCBI chr14:11,217,125...11,293,018
Ensembl chr14:11,216,978...11,293,410
G
EPO
erythropoietin
treatment
ISO
mRNA:increased expression:brain: CTD Direct Evidence: therapeutic
RGD CTD
PMID:18093155 PMID:20833152 PMID:23063952
RGD:10401061 RGD:2293059
NCBI chr 3:8,620,508...8,622,936
Ensembl chr 3:8,620,508...8,622,936
G
EPOR
erythropoietin receptor
ISO
mRNA:increased expression:brain:
RGD
PMID:18093155
RGD:2293059
NCBI chr 2:70,063,601...70,068,821
Ensembl chr 2:70,063,519...70,068,821
G
F2
coagulation factor II, thrombin
severity
ISO
RGD
PMID:21355766
RGD:5147766
NCBI chr 2:15,793,257...15,819,151
Ensembl chr 2:15,791,455...15,819,137
G
FAS
Fas cell surface death receptor
ISO
associated with Hyperoxia mRNA:increased expression:hippocampus
RGD
PMID:16078565 PMID:19107989
RGD:1600354 RGD:8662854
NCBI chr14:100,927,305...100,954,781
Ensembl chr14:100,927,089...100,956,716
G
FGF2
fibroblast growth factor 2
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:21269288
NCBI chr 8:101,278,877...101,344,084
Ensembl chr 8:101,278,885...101,343,916
G
FMR1
Fragile X messenger ribonucleoprotein 1
ISO
protein:altered localization:hippocampus (rat)
RGD
PMID:16510718
RGD:11667962
NCBI chr X:120,361,232...120,400,282
Ensembl chr X:120,361,367...120,399,831
G
FOS
Fos proto-oncogene, AP-1 transcription factor subunit
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:9630518
NCBI chr 7:98,449,508...98,451,971
Ensembl chr 7:98,449,349...98,455,554
G
FOXP1
forkhead box P1
treatment
ISO
RGD
PMID:26842647
RGD:11561903
NCBI chr13:52,346,844...52,974,358
Ensembl chr13:52,348,234...52,876,892
G
G6PD
glucose-6-phosphate dehydrogenase
ISO
protein:decreased expression:hippocampus
RGD
PMID:18501200
RGD:2307353
NCBI chr X:125,029,147...125,041,040
Ensembl chr X:125,029,150...125,041,040
G
GABRB3
gamma-aminobutyric acid type A receptor subunit beta3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 1:140,566,443...140,906,516
Ensembl chr 1:140,566,540...140,905,623
G
GABRG3
gamma-aminobutyric acid type A receptor subunit gamma3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 1:139,855,461...140,464,592
Ensembl chr 1:139,857,095...140,464,579
G
GDNF
glial cell derived neurotrophic factor
ISO
mRNA:increased expression:brain
RGD
PMID:18501516
RGD:2324932
NCBI chr16:22,936,602...22,965,929
Ensembl chr16:22,936,604...22,966,536
G
GJA1
gap junction protein alpha 1
treatment
ISO
RGD
PMID:23485053
RGD:8662424
NCBI chr 1:40,988,818...41,002,129
Ensembl chr 1:40,988,528...41,002,156
G
GJA5
gap junction protein alpha 5
ISO
protein:increased expression:cerebral artery
RGD
PMID:21895483
RGD:7207391
NCBI chr 4:99,854,129...99,871,288
Ensembl chr 4:99,854,392...99,871,286
G
GPX1
glutathione peroxidase 1
ISO
mRNA:decreased expression:hippocampus, neuron
RGD
PMID:15791111
RGD:2306624
NCBI chr13:31,916,269...31,917,337
Ensembl chr13:31,916,246...31,917,433
G
GRM8
glutamate metabotropic receptor 8
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr18:20,945,049...21,756,952
Ensembl chr18:20,951,003...21,758,568
G
GSK3B
glycogen synthase kinase 3 beta
ISO
CTD Direct Evidence: marker/mechanism
CTD RGD
PMID:22643085 PMID:24675465
RGD:10045646
NCBI chr13:140,136,109...140,370,197
Ensembl chr13:140,136,158...140,369,569
G
GSN
gelsolin
ISO
RGD
PMID:14588109
RGD:1599864
NCBI chr 1:261,295,711...261,372,848
Ensembl chr 1:261,307,008...261,372,848
G
HCN1
hyperpolarization activated cyclic nucleotide gated potassium channel 1
ISO
mRNA,protein:decreased expression:hippocampus:
RGD
PMID:11726545
RGD:9686434
NCBI chr16:29,439,294...29,808,855
Ensembl chr16:29,439,264...29,808,993
G
HMGB1
high mobility group box 1
treatment
ISO
RGD
PMID:22915134
RGD:7245513
NCBI chr11:7,195,556...7,321,071
G
HMGCR
3-hydroxy-3-methylglutaryl-CoA reductase
ISO
RGD
PMID:18562561
RGD:5508455
NCBI chr 2:84,380,245...84,401,117
Ensembl chr 2:84,380,224...84,402,957
G
HMOX1
heme oxygenase 1
ISO
RGD
PMID:23470432
RGD:10755702
G
HP
haptoglobin
ISO
mRNA:increased expression:liver
RGD
PMID:23172820
RGD:11041806
NCBI chr 6:14,980,382...14,985,245
G
HSPA4
heat shock protein family A (Hsp70) member 4
ISO
protein:increased expression:cerebral white matter (rat)
RGD
PMID:22067617
RGD:5688785
NCBI chr 2:135,345,724...135,391,112
Ensembl chr 2:135,345,867...135,391,108
G
HSPB1
heat shock protein family B (small) member 1
ISO
RGD
PMID:11746764
RGD:6480530
NCBI chr 3:10,038,074...10,039,441
Ensembl chr 3:10,037,949...10,039,704
G
HTR7
5-hydroxytryptamine receptor 7
ISO
RGD
PMID:22465320
RGD:6482178
NCBI chr14:102,443,312...102,548,894
Ensembl chr14:102,444,588...102,548,907
G
ICAM1
intercellular adhesion molecule 1
ISO
protein:increased expression:brain:
RGD
PMID:16230799
RGD:11522716
NCBI chr 2:69,097,136...69,107,722
Ensembl chr 2:69,097,122...69,108,205
G
IGF1
insulin like growth factor 1
treatment
ISO
human protein in a rat model
RGD
PMID:9344566
RGD:12904928
NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,033
G
IGF2
insulin like growth factor 2
ISO
mRNA:decreased expression:brain
RGD
PMID:11123717
RGD:5509972
NCBI chr 2:1,469,183...1,496,417
G
IL10
interleukin 10
severity treatment
ISO
CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:21549006 PMID:23075771 PMID:23971414
RGD:7364822 RGD:7364983
NCBI chr 9:67,400,727...67,405,941
Ensembl chr 9:67,400,728...67,405,378
G
IL12RB2
interleukin 12 receptor subunit beta 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 6:145,210,251...145,292,399
Ensembl chr 6:145,212,981...145,281,791
G
IL13RA2
interleukin 13 receptor subunit alpha 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr X:94,402,665...94,455,609
Ensembl chr X:94,402,676...94,439,060
G
IL16
interleukin 16
ISO
RGD
PMID:17983426
RGD:5024939
NCBI chr 7:49,973,937...50,102,346
Ensembl chr 7:49,973,938...50,102,346
G
IL17RD
interleukin 17 receptor D
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr13:38,935,631...39,006,721
Ensembl chr13:38,939,316...39,006,690
G
IL18
interleukin 18
severity
ISO
mRNA, protein:increased expression:brain
RGD
PMID:17188500
RGD:2315917
NCBI chr 9:39,839,959...39,861,258
Ensembl chr 9:39,834,973...39,861,219
G
IL18R1
interleukin 18 receptor 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 3:51,803,383...51,844,758
Ensembl chr 3:51,803,175...51,844,684
G
IL1A
interleukin 1 alpha
ISO
CTD Direct Evidence: marker/mechanism mRNA, protein:increased expression:cerebral cortex
CTD RGD
PMID:16024175 PMID:21549006
RGD:2311098
NCBI chr 3:43,718,320...43,731,668
Ensembl chr 3:43,718,368...43,731,121
G
IL1R1
interleukin 1 receptor type 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr 3:52,192,912...52,334,734
Ensembl chr 3:52,192,915...52,288,485
G
IL1RN
interleukin 1 receptor antagonist
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:25665855
G
IL2
interleukin 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 8:101,640,938...101,645,683
Ensembl chr 8:101,640,944...101,645,609
G
IL28B
interleukin 28B (interferon, lambda 3)
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 6:47,951,925...47,953,282
Ensembl chr 6:47,951,595...47,953,467
G
IL31RA
interleukin 31 receptor A
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr16:34,987,399...35,071,367
Ensembl chr16:35,012,094...35,071,381
G
IL4
interleukin 4
ISO
protein:decreased expression:plasma
RGD
PMID:24519543
RGD:10402802
NCBI chr 2:134,986,817...134,994,365
Ensembl chr 2:134,986,817...134,994,365
G
IL5
interleukin 5
treatment
ISO
RGD
PMID:24530657 PMID:24602693
RGD:11522766 RGD:11522770
NCBI chr 2:134,832,143...134,846,141
Ensembl chr 2:134,832,147...134,835,212
G
IL6
interleukin 6
ISO
protein:increased expression:cerebrospinal fluid (rat) CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:10027774 PMID:19800810 PMID:21549006 PMID:23159883
RGD:11049549
NCBI chr 9:91,506,421...91,510,830
Ensembl chr 9:91,506,421...91,511,263
G
IL7
interleukin 7
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 4:57,677,895...57,744,713
Ensembl chr 4:57,684,796...57,744,709
G
IL9R
interleukin 9 receptor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 3:41,581,253...41,590,485
Ensembl chr 3:41,583,693...41,594,867
G
IRF1
interferon regulatory factor 1
ISO
mRNA:increased expression:cerebral cortex CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:12503083 PMID:21549006
RGD:2317873
NCBI chr 2:134,776,122...134,783,646
Ensembl chr 2:134,776,129...134,783,801
G
JAK2
Janus kinase 2
ISO
RGD
PMID:21596098
RGD:6483023
NCBI chr 1:216,849,744...217,002,310
Ensembl chr 1:216,848,689...217,002,148
G
JUN
Jun proto-oncogene, AP-1 transcription factor subunit
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr 6:153,686,425...153,687,635
Ensembl chr 6:153,685,682...153,687,636
G
KCNJ10
potassium inwardly rectifying channel subfamily J member 10
ISO
RGD
PMID:20861444
RGD:8662901
NCBI chr 4:90,421,956...90,457,406
Ensembl chr 4:90,422,025...90,457,406
G
KDR
kinase insert domain receptor
ISO
protein:increased expression:cerebral cortex
RGD
PMID:19733172 PMID:21307798
RGD:5684382 RGD:5684402
NCBI chr 8:41,809,116...41,856,379
Ensembl chr 8:41,809,122...41,856,336
G
LEP
leptin
ISO
RGD
PMID:21276361
RGD:5128517
NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,323
G
LOC110255234
liver carboxylesterase-like
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
G
LOC110258578
interleukin-1 beta-like
ISO
mRNA, protein:increased expression:brain protein:increased expression:brain, cerebrospinal fluid mRNA, protein:increased expression:cerebral cortex CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:16024175 PMID:17612572 PMID:19800810 PMID:21549006 PMID:22503903
RGD:1626652 RGD:2311098 RGD:6482651
G
LSG1
large 60S subunit nuclear export GTPase 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:14499481
NCBI chr13:131,623,530...131,653,930
Ensembl chr13:131,623,534...131,657,046
G
LY86
lymphocyte antigen 86
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr 7:4,108,124...4,156,629
Ensembl chr 7:4,108,118...4,156,625
G
MAG
myelin associated glycoprotein
susceptibility
ISO
RGD
PMID:17156367
RGD:9685230
NCBI chr 6:44,794,197...44,809,933
Ensembl chr 6:44,794,204...44,809,926
G
MAP1B
microtubule associated protein 1B
ISO
protein:increased expression, increased phosphorylation:brain
RGD
PMID:10906717
RGD:2304029
NCBI chr16:48,403,338...48,501,453
Ensembl chr16:48,403,568...48,498,885
G
MAP1LC3A
microtubule associated protein 1 light chain 3 alpha
ISO
RGD
PMID:24221859
RGD:11558018
NCBI chr17:37,957,830...37,959,505
Ensembl chr17:37,957,507...37,959,505
G
MAP2
microtubule associated protein 2
ISO
protein:decreased expression:cerebral cortex, neuron
RGD
PMID:20568963 PMID:21401443
RGD:6483087 RGD:6483089
NCBI chr15:112,156,578...112,462,932
Ensembl chr15:112,236,119...112,462,929
G
MAP3K7
mitogen-activated protein kinase kinase kinase 7
treatment
ISO
associated with Subarachnoid Hemorrhage
RGD
PMID:26100626 PMID:27000704 PMID:33414375
RGD:155791672 RGD:155804286 RGD:155882440
NCBI chr 1:58,482,046...58,548,087
Ensembl chr 1:58,481,956...58,548,057
G
MBL2
mannose binding lectin 2
disease_progression
ISO
RGD
PMID:18183030
RGD:12910935
NCBI chr14:97,103,926...97,107,635
Ensembl chr14:97,102,823...97,108,083
G
MBP
myelin basic protein
ISO
RGD
PMID:18583256
RGD:7349333
NCBI chr 1:147,649,516...147,685,289
Ensembl chr 1:147,590,865...147,685,290
G
MDM2
MDM2 proto-oncogene
ISO
protein:increased expression:brain cortex (rat)
RGD
PMID:15165363
RGD:2317397
NCBI chr 5:33,105,717...33,137,602
Ensembl chr 5:33,105,759...33,137,739
G
MIF
macrophage migration inhibitory factor
ISO
RGD
PMID:15922484
RGD:1641989
NCBI chr14:49,840,303...49,841,063
Ensembl chr14:49,840,305...49,841,068
G
MIR132
microRNA mir-132
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr12:48,162,625...48,162,702
Ensembl chr12:48,162,614...48,162,714
G
MIR144
microRNA mir-144
ISO
RGD
PMID:25089700
RGD:11576302
NCBI chr12:45,088,958...45,089,033
Ensembl chr12:45,088,959...45,089,035
G
MIR183
microRNA mir-183
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr18:18,982,269...18,982,338
Ensembl chr18:18,982,269...18,982,338
G
MMP9
matrix metallopeptidase 9
treatment
ISO
CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:16671440 PMID:19631748 PMID:24661104
RGD:13207312 RGD:1582656
NCBI chr17:48,179,690...48,186,782
Ensembl chr17:48,179,671...48,186,788
G
MPO
myeloperoxidase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr12:34,557,031...34,570,091
Ensembl chr12:34,556,408...34,567,904
G
MT-2B
metallothionein-2A
ISO
mRNA:increased expression:liver (mouse) mRNA:increased expression:dentate gyrus (rat)
RGD
PMID:15650329 PMID:22363575
RGD:6483812 RGD:6483847
NCBI chr 6:18,645,125...18,646,034
Ensembl chr 6:18,645,153...18,646,033
G
MT-CO2
mitochondrially encoded cytochrome c oxidase II
ISO
mRNA, protein:increased expression:hippocampus
RGD
PMID:11686499
RGD:2302298
NCBI chr MT:8,203...8,890
Ensembl chr MT:8,203...8,890
G
MT3
metallothionein 3
treatment
ISO
RGD
PMID:10218634 PMID:10595827 PMID:16314047
RGD:6480628 RGD:9685803 RGD:9685805
NCBI chr 6:18,634,735...18,636,134
Ensembl chr 6:18,634,261...18,636,131
G
MYOC
myocilin
ISO
mRNA:increased expression:cerebral cortex (rat)
RGD
PMID:12799138
RGD:7401267
NCBI chr 9:114,087,370...114,098,765
Ensembl chr 9:114,087,378...114,098,745
G
NFE2L2
NFE2 like bZIP transcription factor 2
ISO
protein:increased expression:lung:
RGD
PMID:18787991 PMID:25089700
RGD:11576302 RGD:5134971
NCBI chr15:82,967,485...83,146,185
Ensembl chr15:82,973,656...83,146,183
G
NGB
neuroglobin
severity
ISO
RGD
PMID:21915648
RGD:9743963
NCBI chr 7:100,341,974...100,346,263
Ensembl chr 7:100,340,940...100,346,438
G
NGFR
nerve growth factor receptor
treatment
ISO
RGD
PMID:23940017
RGD:10414074
NCBI chr12:25,699,410...25,720,355
Ensembl chr12:25,699,427...25,720,356
G
NOS2
nitric oxide synthase 2
ISO
RGD
PMID:11526986
RGD:10395358
NCBI chr12:44,174,944...44,219,875
Ensembl chr12:44,174,948...44,218,146
G
NOX4
NADPH oxidase 4
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:36762617
NCBI chr 9:22,622,105...22,776,691
Ensembl chr 9:22,624,212...22,776,534
G
NPPB
natriuretic peptide B
ISO
associated with lung diseases;protein:increased expression:serum: CTD Direct Evidence: therapeutic
RGD CTD
PMID:19803787 PMID:23837838
RGD:7247620
NCBI chr 6:71,930,374...71,931,843
Ensembl chr 6:71,930,382...71,932,254
G
NPY
neuropeptide Y
ISO
protein:increased expression:adrenal medulla
RGD
PMID:23570732
RGD:10448961
NCBI chr18:47,985,796...47,993,726
Ensembl chr18:47,985,725...47,992,667
G
NQO1
NAD(P)H quinone dehydrogenase 1
treatment
ISO
mRNA:increased expression:lung associated with Subarachnoid Hemorrhage
RGD
PMID:18787991 PMID:20864352
RGD:11035222 RGD:5134971
NCBI chr 6:17,292,962...17,302,593
Ensembl chr 6:17,292,770...17,302,590
G
NT5E
5'-nucleotidase ecto
ISO
protein:altered expression:cerebral cortex (rat)
RGD
PMID:21337375
RGD:5134348
NCBI chr 1:54,400,786...54,450,743
Ensembl chr 1:54,400,810...54,448,742
G
P2RY1
purinergic receptor P2Y1
ISO
protein:increased expression:brain, astrocyte
RGD
PMID:19115395
RGD:2315811
NCBI chr13:92,991,150...92,997,702
Ensembl chr13:92,991,152...92,997,700
G
PALLD
palladin, cytoskeletal associated protein
ISO
protein:increased expression:brain, astrocyte
RGD
PMID:12932445
RGD:2325786
NCBI chr14:20,678,456...21,020,125
Ensembl chr14:20,678,452...21,020,125
G
PARP1
poly(ADP-ribose) polymerase 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17640816
NCBI chr10:14,203,157...14,241,164
Ensembl chr10:14,203,160...14,241,196
G
PAWR
pro-apoptotic WT1 regulator
ISO
mRNA,protein:increased expression:brain:
RGD
PMID:11421591
RGD:9835358
NCBI chr 5:101,693,145...101,797,842
Ensembl chr 5:101,693,246...101,797,838
G
PDE4D
phosphodiesterase 4D
ISO
mRNA, protein:alternative form, decreased phosphorylation:brain
RGD
PMID:23057870
RGD:7327147
NCBI chr16:37,897,300...39,406,534
Ensembl chr16:37,897,302...39,306,364
G
PDGFA
platelet derived growth factor subunit A
ISO
mRNA:increased expression:cerebral cortex, hippocampus
RGD
PMID:9645955
RGD:11084932
NCBI chr 3:296,399...322,967
Ensembl chr 3:301,584...321,712
G
PDGFB
platelet derived growth factor subunit B
ISO
mRNA:increased expression:cerebral cortex, hippocampus
RGD
PMID:9645955
RGD:11084932
Ensembl chr 5:8,986,462...9,007,435
G
PDGFRA
platelet derived growth factor receptor alpha
ISO
mRNA:increased expression:cerebral cortex, hippocampus
RGD
PMID:9645955
RGD:11084932
NCBI chr 8:40,966,568...41,021,440
Ensembl chr 8:40,967,493...41,021,441
G
PDGFRB
platelet derived growth factor receptor beta
ISO
mRNA:increased expression:cerebral cortex, hippocampus
RGD
PMID:9645955
RGD:11084932
NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,756...151,192,647
G
PECAM1
platelet and endothelial cell adhesion molecule 1
ISO
RGD
PMID:22658532
RGD:6484732
NCBI chr12:14,667,643...14,723,296
Ensembl chr12:14,649,044...14,723,293
G
PGLYRP1
peptidoglycan recognition protein 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr 6:52,318,544...52,322,504
Ensembl chr 6:52,318,531...52,322,638
G
PGR
progesterone receptor
ISO
RGD
PMID:23211561
RGD:7248711
NCBI chr 9:32,035,684...32,129,776
Ensembl chr 9:32,035,684...32,129,221
G
PHB1
prohibitin 1
ISO
protein:increased oxidation:cerebral cortex
RGD
PMID:17518533
RGD:2292409
NCBI chr12:25,596,520...25,609,693
Ensembl chr12:25,596,523...25,609,706
G
PHB2
prohibitin 2
ISO
RGD
PMID:24566151
RGD:12903261
NCBI chr 5:63,751,566...63,756,480
Ensembl chr 5:63,751,558...63,756,478
G
PIAS1
protein inhibitor of activated STAT 1
ISO
protein:decreased expression:brain, nucleus
RGD
PMID:21545521
RGD:8693413
NCBI chr 1:165,957,114...166,087,242
Ensembl chr 1:165,957,132...166,087,239
G
PPARA
peroxisome proliferator activated receptor alpha
ISO
agonist more effective in combination with simvastatin
RGD
PMID:18562561
RGD:5508455
NCBI chr 5:3,302,755...3,321,091
Ensembl chr 5:3,300,741...3,364,239
G
PPARGC1A
PPARG coactivator 1 alpha
treatment
ISO
protein:decreased expression:frontal cortex (rat)
RGD
PMID:22642418 PMID:24345766
RGD:10059630 RGD:6484257
NCBI chr 8:17,841,844...18,527,953
Ensembl chr 8:17,841,844...17,946,992
G
PPP3CA
protein phosphatase 3 catalytic subunit alpha
ISO
protein: :hippocampus CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:14499481 PMID:19751097
RGD:6483311
NCBI chr 8:119,429,181...119,754,615
Ensembl chr 8:119,428,779...119,753,105
G
PRF1
perforin 1
ISO
RGD
PMID:20537642
RGD:6482807
NCBI chr14:73,515,306...73,520,256
Ensembl chr14:73,512,769...73,520,202
G
PTGER3
prostaglandin E receptor 3
ISO
protein:increased expression:striatum, microglia (rat)
RGD
PMID:15234107
RGD:9850280
NCBI chr 6:141,958,955...142,160,437
Ensembl chr 6:141,958,955...142,161,286
G
PTGS1
prostaglandin-endoperoxide synthase 1
ISO
protein:increased expression:microglial cells, macrophage, endothelial cell protein:increased expression:microglia, macrophage
RGD
PMID:11565600 PMID:12005397 PMID:19719848
RGD:5688162 RGD:5688239 RGD:5688242
NCBI chr 1:262,456,106...262,482,159
Ensembl chr 1:262,456,155...262,483,035
G
PTGS2
prostaglandin-endoperoxide synthase 2
ISO
CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:12410334 PMID:19719848 PMID:20810888 PMID:21549006 PMID:21866634
RGD:5508191 RGD:5688162
NCBI chr 9:127,850,164...127,858,866
Ensembl chr 9:127,850,015...127,858,884
G
PTPRZ1
protein tyrosine phosphatase receptor type Z1
ISO
RGD
PMID:12088737
RGD:727637
NCBI chr18:25,046,027...25,228,276
Ensembl chr18:25,045,742...25,168,053
G
RCHY1
ring finger and CHY zinc finger domain containing 1
ISO
protein:increased expression:cerebral cortex
RGD
PMID:21728064
RGD:10045359
NCBI chr 8:71,155,388...71,182,020
Ensembl chr 8:71,162,840...71,181,919
G
RELA
RELA proto-oncogene, NF-kB subunit
ISO
protein:increased expression:ileum
RGD
PMID:18288455
RGD:2298787
NCBI chr 2:6,594,869...6,602,684
Ensembl chr 2:6,593,969...6,603,469
G
RET
ret proto-oncogene
ISO
mRNA:increased expression:brain
RGD
PMID:18501516
RGD:2324932
NCBI chr14:61,305,818...61,361,416
Ensembl chr14:61,305,841...61,361,412
G
RHOA
ras homolog family member A
ISO
protein:increased expression:microglial cell, brain
RGD
PMID:17929039
RGD:2298888
NCBI chr13:31,918,484...31,991,207
Ensembl chr13:31,918,834...31,986,607
G
ROBO1
roundabout guidance receptor 1
ISO
mRNA:increased expression:brain protein:increased expression:brain, immune cell
RGD
PMID:16262652 PMID:26550694
RGD:2316136 RGD:243048437
NCBI chr13:175,348,223...176,479,482
Ensembl chr13:175,348,410...176,479,481
G
ROBO2
roundabout guidance receptor 2
ISO
mRNA:increased expression:brain
RGD
PMID:16262652
RGD:2316136
NCBI chr13:177,365,712...179,040,027
Ensembl chr13:177,365,772...179,013,542
G
ROBO3
roundabout guidance receptor 3
ISO
mRNA:increased expression:brain
RGD
PMID:16262652
RGD:2316136
NCBI chr 9:52,065,043...52,081,764
Ensembl chr 9:52,065,499...52,081,625
G
RPS27A
ribosomal protein S27a
ISO
mRNA:decreased expression:cerebral cortex, hippocampus
RGD
PMID:17936732
RGD:11041870
NCBI chr 3:85,989,609...85,992,257
Ensembl chr 3:85,986,501...85,992,503
G
S100B
S100 calcium binding protein B
severity
ISO
CTD Direct Evidence: marker/mechanism|therapeutic
CTD RGD
PMID:11520488 PMID:21783483 PMID:21976236
RGD:5508761
G
SELE
selectin E
ISO
protein:increased expression:brain
RGD
PMID:19107536
RGD:2313599
NCBI chr 4:81,289,061...81,299,657
G
SERPINC1
serpin family C member 1
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:21534203
NCBI chr 9:116,181,988...116,193,100
Ensembl chr 9:116,181,670...116,193,201
G
SERPINF1
serpin family F member 1
treatment
ISO
human gene in a rat model protein:altered expression:cerebellum (rat)
RGD
PMID:17709187 PMID:20142768
RGD:8612994 RGD:8622925
NCBI chr12:47,949,004...47,959,471
Ensembl chr12:47,948,510...47,959,470
G
SIRT1
sirtuin 1
treatment
ISO
RGD
PMID:17970622
RGD:9497541
NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,167...71,123,297
G
SKP2
S-phase kinase associated protein 2
ISO
protein:increased expression:brain
RGD
PMID:19852587
RGD:2315049
NCBI chr16:21,463,270...21,500,925
Ensembl chr16:21,463,012...21,509,310
G
SLC18A3
solute carrier family 18 member A3
ISO
protein:decreased expression:brain
RGD
PMID:18848922
RGD:5686682
NCBI chr14:90,113,534...90,115,813
Ensembl chr14:90,113,844...90,115,430
G
SLIT1
slit guidance ligand 1
ISO
mRNA:increased expression:brain
RGD
PMID:16262652
RGD:2316136
NCBI chr14:108,446,003...108,624,508
Ensembl chr14:108,446,004...108,624,302
G
SLIT2
slit guidance ligand 2
exacerbates
ISO
RGD
PMID:26550694
RGD:243048437
NCBI chr 8:14,758,426...15,149,515
Ensembl chr 8:14,758,335...15,148,133
G
SLIT3
slit guidance ligand 3
ISO
mRNA:increased expression:brain
RGD
PMID:16262652
RGD:2316136
NCBI chr16:54,551,536...55,221,427
Ensembl chr16:54,553,426...55,220,296
G
SNCA
synuclein alpha
ISO
RGD
PMID:14637093 PMID:25089700
RGD:11576302 RGD:6480195
NCBI chr 8:129,247,724...129,388,307
Ensembl chr 8:129,248,819...129,271,128
G
SNCB
synuclein beta
ISO
RGD
PMID:14637093
RGD:6480195
NCBI chr 2:81,287,764...81,302,859
Ensembl chr 2:81,287,759...81,302,861
G
SNCG
synuclein gamma
ISO
RGD
PMID:14637093
RGD:6480195
NCBI chr14:87,916,353...87,922,111
Ensembl chr14:87,904,659...87,922,095
G
SNW1
SNW domain containing 1
ISO
mRNA, protein:increased expression:cerebral cortex (rat)
RGD
PMID:22965216
RGD:11035237
NCBI chr 7:100,718,298...100,749,414
Ensembl chr 7:100,718,036...100,749,356
G
SOD1
superoxide dismutase 1
ISO
RGD
PMID:16248885
RGD:1581214
NCBI chr13:195,326,573...195,335,273
Ensembl chr13:195,326,649...195,337,729
G
SOD2
superoxide dismutase 2
ISO
CTD Direct Evidence: therapeutic
RGD CTD
PMID:16248885 PMID:24462953
RGD:1581214
NCBI chr 1:7,679,352...7,689,564
Ensembl chr 1:7,679,352...7,689,560
G
SPARC
secreted protein acidic and cysteine rich
ISO
mRNA:increased expression:brain, blood vessel
RGD
PMID:9704602
RGD:2300066
NCBI chr16:71,368,164...71,380,972
Ensembl chr16:71,357,586...71,381,161
G
SSTR2
somatostatin receptor 2
ISO
RGD
PMID:11879809
RGD:2325002
NCBI chr12:7,783,401...7,789,483
Ensembl chr12:7,783,431...7,789,488
G
SSTR3
somatostatin receptor 3
ISO
RGD
PMID:11879809
RGD:2325002
NCBI chr 5:10,581,814...10,593,796
Ensembl chr 5:10,581,912...10,589,982
G
STAT1
signal transducer and activator of transcription 1
ISO
RGD
PMID:21596098
RGD:6483023
NCBI chr15:95,593,201...95,646,324
Ensembl chr15:95,593,211...95,646,260
G
STAT3
signal transducer and activator of transcription 3
ISO
protein:increased phosphorylation:brain
RGD
PMID:21596098 PMID:22145815 PMID:22827467
RGD:6483023 RGD:6892706 RGD:8694312
NCBI chr12:20,407,316...20,471,091
Ensembl chr12:20,407,233...20,472,992
G
STRN
striatin
ISO
RGD
PMID:16351572
RGD:2311293
NCBI chr 3:103,249,826...103,364,750
Ensembl chr 3:103,249,884...103,351,902
G
TARDBP
TAR DNA binding protein
ISO
RGD
PMID:22101322
RGD:5687195
NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,860...71,227,704
G
TF
transferrin
ISO
RGD
PMID:22538758
RGD:7244386
NCBI chr13:74,930,655...74,970,599
Ensembl chr13:74,930,655...74,972,763
G
TH
tyrosine hydroxylase
ISO
protein:decreased activity:striatum (rat)
RGD
PMID:21047500
RGD:5128822
NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,620...1,506,170
G
THBD
thrombomodulin
onset
ISO
RGD
PMID:17895610
RGD:5685007
NCBI chr17:30,219,870...30,223,499
Ensembl chr17:30,217,303...30,224,099
G
TICAM2
toll like receptor adaptor molecule 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr 2:119,758,622...119,778,650
G
TIMP1
TIMP metallopeptidase inhibitor 1
ISO
mRNA:increased expression:brain, astrocytes
RGD
PMID:10719361
RGD:2290468
NCBI chr X:42,103,251...42,106,289
Ensembl chr X:42,102,172...42,106,296
G
TIMP2
TIMP metallopeptidase inhibitor 2
ISO
mRNA:increased expression:brain, neuron, microglial cell
RGD
PMID:10719361
RGD:2290468
NCBI chr12:3,254,794...3,300,835
Ensembl chr12:3,254,493...3,300,834
G
TJP1
tight junction protein 1
ISO
RGD
PMID:19889224
RGD:2325128
NCBI chr 1:144,930,387...145,195,857
Ensembl chr 1:144,930,370...145,195,836
G
TLR1
toll like receptor 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr 8:30,147,600...30,155,454
Ensembl chr 8:30,147,624...30,155,466
G
TLR2
toll like receptor 2
ISO
mRNA:increased expression:brain CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:18316784 PMID:21549006
RGD:2312713
NCBI chr 8:75,416,257...75,428,370
Ensembl chr 8:75,411,993...75,428,330
G
TLR4
toll like receptor 4
ISO
CTD Direct Evidence: marker/mechanism mRNA:increased expression:brain
CTD RGD
PMID:18316784 PMID:21549006
RGD:2312713
NCBI chr 1:258,044,610...258,054,641
Ensembl chr 1:258,044,610...258,058,970
G
TLR9
toll like receptor 9
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr13:34,353,444...34,370,990
Ensembl chr13:34,349,609...34,357,673
G
TNF
tumor necrosis factor
ISO
CTD Direct Evidence: marker/mechanism
CTD RGD
PMID:10674461 PMID:19800810 PMID:21549006
RGD:13825262
NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,628...23,702,415
G
TNFRSF13B
TNF receptor superfamily member 13B
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr12:61,245,976...61,270,154
Ensembl chr12:61,246,062...61,270,146
G
TNFRSF13C
TNF receptor superfamily member 13C
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 5:6,699,812...6,703,403
Ensembl chr 5:6,699,878...6,703,656
G
TNFRSF1A
TNF receptor superfamily member 1A
ISO
CTD Direct Evidence: marker/mechanism protein:increased expression:brain
CTD RGD
PMID:17074049 PMID:21549006
RGD:1624183
NCBI chr 5:64,319,349...64,331,876
Ensembl chr 5:64,319,051...64,331,909
G
TNFSF10
TNF superfamily member 10
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr13:111,021,952...111,103,060
Ensembl chr13:110,983,298...111,038,324
G
TNFSF12
TNF superfamily member 12
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr12:52,843,026...52,853,328
Ensembl chr12:52,843,026...52,853,325
G
TRAF4
TNF receptor associated factor 4
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr12:44,975,639...44,981,650
Ensembl chr12:44,975,632...44,987,104
G
TRPM2
transient receptor potential cation channel subfamily M member 2
ISO
mRNA, protein:increased expression:cerebral cortex, hippocampus
RGD
PMID:20309649
RGD:9999437
NCBI chr13:207,212,339...207,263,313
Ensembl chr13:207,212,457...207,262,064
G
UBA52
ubiquitin A-52 residue ribosomal protein fusion product 1
ISO
mRNA:decreased expression:cerebral cortex, hippocampus (rat)
RGD
PMID:17936732
RGD:11041870
NCBI chr 2:59,238,802...59,241,512
Ensembl chr 2:59,238,906...59,240,274
G
UCP2
uncoupling protein 2
ISO
CTD Direct Evidence: therapeutic
CTD RGD
PMID:12858170
RGD:7204436
NCBI chr 9:8,358,559...8,364,552
Ensembl chr 9:8,358,025...8,365,547
G
VEGFA
vascular endothelial growth factor A
ISO
CTD Direct Evidence: therapeutic
CTD RGD
PMID:12230324 PMID:18065154
RGD:1580574
NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366
G
VEGFB
vascular endothelial growth factor B
ISO
mRNA, protein:increased expression:brain
RGD
PMID:12230324
RGD:1580574
NCBI chr 2:7,872,873...7,876,149
Ensembl chr 2:7,872,870...7,876,118
G
VIM
vimentin
ISO
protein:increased expression:brain
RGD
PMID:15527750 PMID:19728994
RGD:6480519 RGD:6480527
NCBI chr10:43,516,441...43,526,172
Ensembl chr10:43,517,307...43,526,170
G
XDH
xanthine dehydrogenase
treatment
ISO
RGD
PMID:26528358
RGD:13208950
NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,987,126...108,053,169
G
APOE
apolipoprotein E
susceptibility
ISO
DNA:polymorphism:exon:
RGD
PMID:9214529
RGD:7495763
NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,292...51,375,330
G
TARDBP
TAR DNA binding protein
ISO
protein:increased expression:brain
RGD
PMID:20720505
RGD:5687179
NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,860...71,227,704
G
BECN1
beclin 1
ISO
protein:increased expression:neuron
RGD
PMID:16004578
RGD:6483315
NCBI chr12:20,041,914...20,054,249
Ensembl chr12:20,041,956...20,054,373
G
GFAP
glial fibrillary acidic protein
ISO
RGD
PMID:8833197
RGD:6480531
NCBI chr12:18,456,268...18,466,594
Ensembl chr12:18,456,263...18,466,592
G
GOT1
glutamic-oxaloacetic transaminase 1
ISO
human protein in a rat model
RGD
PMID:17014847
RGD:13504858
NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874
G
IGF1
insulin like growth factor 1
ISO
protein:decreased expression:serum:
RGD
PMID:12002507
RGD:8548865
NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,033
G
IGFBP3
insulin like growth factor binding protein 3
ISO
protein:decreased expression:serum:
RGD
PMID:12002507
RGD:8548865
NCBI chr18:50,002,921...50,009,425
Ensembl chr18:50,003,022...50,010,690
G
VIM
vimentin
ISO
RGD
PMID:8833197
RGD:6480531
NCBI chr10:43,516,441...43,526,172
Ensembl chr10:43,517,307...43,526,170
G
ALDH3A1
aldehyde dehydrogenase 3 family member A1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:28038895
NCBI chr12:59,895,476...59,905,900
Ensembl chr12:59,897,496...59,905,897
G
TP63
tumor protein p63
ISO
RGD
PMID:12167247
RGD:11568649
NCBI chr13:127,115,990...127,347,082
Ensembl chr13:127,116,105...127,347,068
G
IFNG
interferon gamma
ISO
mRNA,protein:increased expression:corneal
RGD
PMID:15832292
RGD:8157597
NCBI chr 5:32,477,906...32,482,670
Ensembl chr 5:32,477,906...32,482,670
G
BMP4
bone morphogenetic protein 4
ISO
mRNA:increased expression:superior cervical ganglion
RGD
PMID:16420416
RGD:2289006
NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637
G
CX3CL1
C-X3-C motif chemokine ligand 1
ISO
RGD
PMID:15153618
RGD:4891994
NCBI chr 6:19,312,351...19,324,439
G
S100B
S100 calcium binding protein B
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:30076900
G
IL10
interleukin 10
treatment
ISO
RGD
PMID:22553604
RGD:7364851
NCBI chr 9:67,400,727...67,405,941
Ensembl chr 9:67,400,728...67,405,378
G
LOC110258578
interleukin-1 beta-like
ISO
protein:increased expression:retina
RGD
PMID:9618720
RGD:7794723
G
PPARG
peroxisome proliferator activated receptor gamma
ISO
protein:increased expression:cornea, neutrophil, macrophage (rat)
RGD
PMID:24194635
RGD:8552904
NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,322...68,433,944
G
FGF2
fibroblast growth factor 2
ISO
protein:increased expression:lens
RGD
PMID:15273655
RGD:8655664
NCBI chr 8:101,278,877...101,344,084
Ensembl chr 8:101,278,885...101,343,916
G
MIR183
microRNA mir-183
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:27208084
NCBI chr18:18,982,269...18,982,338
Ensembl chr18:18,982,269...18,982,338
G
MIR96
microRNA mir-96
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:27208084
NCBI chr18:18,982,506...18,982,590
Ensembl chr18:18,982,506...18,982,590
G
PPARG
peroxisome proliferator activated receptor gamma
treatment
ISO
RGD
PMID:18658087
RGD:8552893
NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,322...68,433,944
G
ADCYAP1
adenylate cyclase activating polypeptide 1
ISO
mRNA:increased expression:facial VII nucleus
RGD
PMID:19427307
RGD:2325258
NCBI chr 6:105,414,628...105,422,294
Ensembl chr 6:105,414,631...105,422,294
G
ATF2
activating transcription factor 2
ISO
RGD
PMID:9813301
RGD:10047413
NCBI chr15:80,984,969...81,076,573
Ensembl chr15:80,985,126...81,081,014
G
CCR2
C-C motif chemokine receptor 2
ISO
RGD
PMID:19922414
RGD:6892922
NCBI chr13:29,251,950...29,286,470
Ensembl chr13:29,285,012...29,286,467
G
CD59
CD59 molecule
ISO
mRNA, protein:increased expression:facial VII nucleus
RGD
PMID:9846834
RGD:1600495
NCBI chr 2:27,186,587...27,207,303
G
CLU
clusterin
ISO
protein:increased expression:neuron,astrocyte
RGD
PMID:10800205
RGD:408418725
NCBI chr14:11,336,585...11,352,569
Ensembl chr14:11,336,595...11,349,764
G
CSF1
colony stimulating factor 1
ISO
protein:increased expression:facial VII nerve, microglial cell
RGD
PMID:20831658
RGD:5131509
NCBI chr 4:110,178,466...110,198,232
Ensembl chr 4:110,178,475...110,197,900
G
CTSS
cathepsin S
ISO
RGD
PMID:17539023
RGD:5686912
NCBI chr 4:98,415,273...98,442,952
Ensembl chr 4:98,417,883...98,442,950
G
GFRA1
GDNF family receptor alpha 1
ISO
mRNA:increased expression:facial VII nucleus
RGD
PMID:9582449
RGD:6218984
NCBI chr14:126,273,558...126,499,957
Ensembl chr14:126,277,875...126,499,465
G
HGF
hepatocyte growth factor
treatment
ISO
RGD
PMID:21562589
RGD:8548634
NCBI chr 9:98,437,771...98,513,573
Ensembl chr 9:98,438,143...98,513,564
G
MT3
metallothionein 3
treatment
ISO
RGD
PMID:14625437
RGD:9685806
NCBI chr 6:18,634,735...18,636,134
Ensembl chr 6:18,634,261...18,636,131
G
NDUFA5
NADH:ubiquinone oxidoreductase subunit A5
ISO
mRNA:increased expression:skeletal muscle
RGD
PMID:8875451
RGD:2302319
NCBI chr18:23,881,872...23,896,699
Ensembl chr18:23,881,966...23,900,855
G
RET
ret proto-oncogene
ISO
mRNA:increased expression:facial VII nucleus
RGD
PMID:9582449
RGD:6218984
NCBI chr14:61,305,818...61,361,416
Ensembl chr14:61,305,841...61,361,412
G
ACVR1B
activin A receptor type 1B
ISO
RGD
PMID:9013782
RGD:151665480
NCBI chr 5:17,314,322...17,350,726
Ensembl chr 5:17,314,276...17,350,722
G
ADAMTS1
ADAM metallopeptidase with thrombospondin type 1 motif 1
ISO
mRNA:increased expression:hypoglossal nerve
RGD
PMID:11311987
RGD:5037239
NCBI chr13:190,277,175...190,285,957
Ensembl chr13:190,276,430...190,286,214
G
AIF1
allograft inflammatory factor 1
ISO
RGD
PMID:9698327
RGD:704401
NCBI chr 7:23,711,752...23,731,191
Ensembl chr 7:23,728,726...23,731,675
G
CSNK2B
casein kinase 2 beta
ISO
RGD
PMID:11068334
RGD:11565824
NCBI chr 7:23,781,194...23,787,914
Ensembl chr 7:23,780,210...23,792,502 Ensembl chr 7:23,780,210...23,792,502
G
FGF2
fibroblast growth factor 2
ISO
RGD
PMID:9183688
RGD:8655640
NCBI chr 8:101,278,877...101,344,084
Ensembl chr 8:101,278,885...101,343,916
G
FGFR1
fibroblast growth factor receptor 1
ISO
RGD
PMID:9183688
RGD:8655640
NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,724
G
GFRA1
GDNF family receptor alpha 1
ISO
mRNA:increased expression:hypoglossal XII nerve
RGD
PMID:10407179
RGD:6218979
NCBI chr14:126,273,558...126,499,957
Ensembl chr14:126,277,875...126,499,465
G
IL1R1
interleukin 1 receptor type 1
ISO
mRNA:increased expression:hypoglossal nerve
RGD
PMID:11311987
RGD:5037239
NCBI chr 3:52,192,912...52,334,734
Ensembl chr 3:52,192,915...52,288,485
G
MCAM
melanoma cell adhesion molecule
ISO
RGD
PMID:10076889
RGD:7364787
NCBI chr 9:46,506,375...46,522,091
Ensembl chr 9:46,512,784...46,522,083
G
MME
membrane metalloendopeptidase
ISO
RGD
PMID:8201016
RGD:13801045
NCBI chr13:95,018,395...95,122,977
Ensembl chr13:95,019,081...95,126,045
G
PRKACA
protein kinase cAMP-activated catalytic subunit alpha
ISO
RGD
PMID:7769990
RGD:7327191
NCBI chr 2:65,074,876...65,095,564
Ensembl chr 2:65,074,870...65,095,551
G
PRKACB
protein kinase cAMP-activated catalytic subunit beta
ISO
RGD
PMID:7769990
RGD:7327191
NCBI chr 6:129,520,397...129,636,207
Ensembl chr 6:129,520,376...129,635,733
G
RET
ret proto-oncogene
ISO
mRNA:increased expression:hypoglossal XII nerve
RGD
PMID:10407179
RGD:6218979
NCBI chr14:61,305,818...61,361,416
Ensembl chr14:61,305,841...61,361,412
G
SMAD1
SMAD family member 1
ISO
mRNA:increased expression:hypoglossal nucleus
RGD
PMID:17166487
RGD:1643227
NCBI chr 8:82,907,557...82,987,909
Ensembl chr 8:82,908,527...82,968,994
G
SMAD2
SMAD family member 2
ISO
mRNA:increased expression:hypoglossal nucleus
RGD
PMID:17166487
RGD:1643227
NCBI chr 1:97,415,360...97,511,388
Ensembl chr 1:97,415,716...97,511,357
G
SMAD3
SMAD family member 3
ISO
mRNA:increased expression:hypoglossal nucleus
RGD
PMID:17166487
RGD:1643227
NCBI chr 1:164,998,457...165,124,455
Ensembl chr 1:164,998,103...165,124,449
G
SMAD4
SMAD family member 4
ISO
mRNA:increased expression:hypoglossal nucleus
RGD
PMID:17166487
RGD:1643227
NCBI chr 1:100,521,843...100,633,501
Ensembl chr 1:100,589,850...100,628,029
G
SMAD7
SMAD family member 7
ISO
mRNA:increased expression:hypoglossal nucleus
RGD
PMID:17166487
RGD:1643227
NCBI chr 1:98,512,800...98,543,924
Ensembl chr 1:98,514,267...98,542,382
G
SMAD9
SMAD family member 9
ISO
mRNA:decreased expression:hypoglossal nucleus
RGD
PMID:17166487
RGD:1643227
NCBI chr11:12,705,652...12,727,981
Ensembl chr11:12,705,368...12,763,008
G
TXNRD1
thioredoxin reductase 1
ISO
mRNA, protein:increased expression:neuron
RGD
PMID:19833109
RGD:5133729
NCBI chr 5:80,170,334...80,213,889
Ensembl chr 5:80,172,260...80,236,219
G
GP6
glycoprotein VI platelet
exacerbates
ISO
RGD
PMID:21258336
RGD:401824683
NCBI chr 6:59,214,227...59,237,860
Ensembl chr 6:59,215,600...59,237,526
G
MDM2
MDM2 proto-oncogene
treatment
ISO
RGD
PMID:34334113
RGD:155882538
NCBI chr 5:33,105,717...33,137,602
Ensembl chr 5:33,105,759...33,137,739
G
ZEB2
zinc finger E-box binding homeobox 2
treatment
ISO
protein:increased expression:brain (rat)
RGD
PMID:34334113
RGD:155882538
NCBI chr15:7,498,879...7,631,347
Ensembl chr15:7,499,026...7,632,655
G
CITED2
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2
ISO
mRNA:decreased expression:bone
RGD
PMID:19607804
RGD:5147852
NCBI chr 1:25,155,652...25,158,517
Ensembl chr 1:25,155,664...25,160,279
G
IHH
Indian hedgehog signaling molecule
ISO
RGD
PMID:23992905
RGD:12911207
NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121
G
NTRK2
neurotrophic receptor tyrosine kinase 2
ISO
mRNA:increased expression:motor neuron
RGD
PMID:21456016
RGD:5684341
NCBI chr10:30,030,050...30,429,938
Ensembl chr10:30,033,405...30,429,882
G
ADCY10
adenylate cyclase 10
ISO
protein:decreased expression:retina
RGD
PMID:22649251
RGD:329347828
NCBI chr 4:83,103,768...83,205,015
Ensembl chr 4:83,098,290...83,205,454
G
ADNP
activity dependent neuroprotector homeobox
ISO
RGD
PMID:18414890
RGD:2312783
NCBI chr17:52,316,388...52,350,732
Ensembl chr17:52,317,913...52,332,079
G
AQP4
aquaporin 4
ISO
RGD
PMID:20216911
RGD:2326035
NCBI chr 6:111,407,632...111,422,169
Ensembl chr 6:111,407,639...111,422,109
G
AQP9
aquaporin 9
ISO
RGD
PMID:20216911
RGD:2326035
NCBI chr 1:113,798,380...113,848,452
Ensembl chr 1:113,794,040...113,848,683
G
ARG2
arginase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:30618589
NCBI chr 7:91,343,987...91,385,911
Ensembl chr 7:91,343,988...91,385,909
G
ATF2
activating transcription factor 2
ISO
RGD
PMID:10366744
RGD:10047417
NCBI chr15:80,984,969...81,076,573
Ensembl chr15:80,985,126...81,081,014
G
BAX
BCL2 associated X, apoptosis regulator
ISO
mRNA:increased expression:optic nerve, retina
RGD
PMID:24357921
RGD:10054098
NCBI chr 6:54,222,341...54,228,150
Ensembl chr 6:54,222,336...54,228,147
G
BCL2
BCL2 apoptosis regulator
ISO
mRNA:decreased expression:optic nerve, retina
RGD
PMID:24357921
RGD:10054098
NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,337,522...158,518,879
G
BDNF
brain derived neurotrophic factor
treatment
ISO
RGD
PMID:9520478 PMID:11050383 PMID:15140649
RGD:8655584 RGD:8655586 RGD:8655637
NCBI chr 2:32,623,668...32,679,293
Ensembl chr 2:32,624,048...32,679,765
G
C3
complement C3
ISO
mRNA:increased expression:optic nerve
RGD
PMID:14577867
RGD:5129542
NCBI chr 2:72,431,470...72,471,622
Ensembl chr 2:72,431,212...72,472,228
G
CDK2
cyclin dependent kinase 2
ISO
mRNA:increased expression:retina
RGD
PMID:16723461
RGD:2293567
NCBI chr 5:21,365,723...21,372,170
Ensembl chr 5:21,365,764...21,372,168
G
CFL1
cofilin 1
treatment
ISO
RGD
PMID:27443501
RGD:11568693
NCBI chr 2:6,471,558...6,475,019
Ensembl chr 2:6,469,254...6,475,035
G
CLU
clusterin
ISO
RGD
PMID:14577867
RGD:5129542
NCBI chr14:11,336,585...11,352,569
Ensembl chr14:11,336,595...11,349,764
G
CSF1R
colony stimulating factor 1 receptor
ISO
mRNA:increased expression:retina (rat)
RGD
PMID:20187850
RGD:151665810
NCBI chr 2:151,102,138...151,130,311
Ensembl chr 2:151,102,147...151,147,633
G
CSF3
colony stimulating factor 3
treatment
ISO
RGD
PMID:20144610
RGD:11039471
NCBI chr12:22,333,445...22,335,949
Ensembl chr12:22,333,449...22,338,753
G
CTSB
cathepsin B
ISO
protein:increased expression:retina (rat)
RGD
PMID:18775855
RGD:2315508
NCBI chr14:15,014,139...15,035,081
Ensembl chr14:15,011,711...15,033,877
G
EDN1
endothelin 1
ISO
protein:increased expression:retina
RGD
PMID:18600494
RGD:4892579
NCBI chr 7:8,752,018...8,758,354
Ensembl chr 7:8,751,695...8,758,348
G
EDNRA
endothelin receptor type A
ISO
mRNA:increased expression:retina
RGD
PMID:18600494
RGD:4892579
NCBI chr 8:81,210,750...81,279,053
Ensembl chr 8:81,209,327...81,276,853
G
EDNRB
endothelin receptor type B
ISO
mRNA:increased expression:retina
RGD
PMID:18600494
RGD:4892579
NCBI chr11:50,073,300...50,102,879
Ensembl chr11:50,072,554...50,102,884
G
EP300
E1A binding protein p300
ISO
human gene in rat model protein:decreased expression:retinal ganglion cell layer (rat)
RGD
PMID:21705428
RGD:7349392
NCBI chr 5:7,311,165...7,394,515
Ensembl chr 5:7,311,171...7,393,760
G
FGF2
fibroblast growth factor 2
treatment
ISO
RGD
PMID:14664816
RGD:8554854
NCBI chr 8:101,278,877...101,344,084
Ensembl chr 8:101,278,885...101,343,916
G
FTO
FTO alpha-ketoglutarate dependent dioxygenase
ISO
mRNA:increased expression:retina
RGD
PMID:33664770
RGD:329951020
NCBI chr 6:31,177,112...31,564,674
Ensembl chr 6:31,174,569...31,564,718
G
GDNF
glial cell derived neurotrophic factor
ISO
RGD
PMID:15144875
RGD:6218970
NCBI chr16:22,936,602...22,965,929
Ensembl chr16:22,936,604...22,966,536
G
GFRA1
GDNF family receptor alpha 1
ISO
RGD
PMID:15144875
RGD:6218970
NCBI chr14:126,273,558...126,499,957
Ensembl chr14:126,277,875...126,499,465
G
GFRA2
GDNF family receptor alpha 2
ISO
RGD
PMID:15144875
RGD:6218970
NCBI chr14:5,743,583...5,837,470
Ensembl chr14:5,743,584...5,837,454
G
HGF
hepatocyte growth factor
treatment
ISO
RGD
PMID:21443522
RGD:8548549
NCBI chr 9:98,437,771...98,513,573
Ensembl chr 9:98,438,143...98,513,564
G
IGF1R
insulin like growth factor 1 receptor
ISO
protein:increased expression:retina: protein: altered activity: eye
RGD
PMID:19484445 PMID:23648097
RGD:10046025 RGD:5686431
NCBI chr 1:137,383,623...137,691,038
Ensembl chr 1:137,387,825...137,691,058
G
JUN
Jun proto-oncogene, AP-1 transcription factor subunit
ISO
RGD
PMID:10366744
RGD:10047417
NCBI chr 6:153,686,425...153,687,635
Ensembl chr 6:153,685,682...153,687,636
G
KCNJ10
potassium inwardly rectifying channel subfamily J member 10
ISO
RGD
PMID:20216911
RGD:2326035
NCBI chr 4:90,421,956...90,457,406
Ensembl chr 4:90,422,025...90,457,406
G
MT-CO1
mitochondrially encoded cytochrome c oxidase I
ISO
mRNA:increased expression:retina
RGD
PMID:12076086
RGD:8662362
NCBI chr MT:6,511...8,055
Ensembl chr MT:6,511...8,055
G
MYRF
myelin regulatory factor
ISO
mRNA:decreased expression: oligodendrocyte
RGD
PMID:29915135
RGD:213230153
NCBI chr 2:9,761,230...9,795,873
G
NAMPT
nicotinamide phosphoribosyltransferase
treatment
ISO
RGD
PMID:28032230
RGD:13781885
NCBI chr 9:106,119,896...106,162,126
Ensembl chr 9:106,119,899...106,294,586
G
NCAM1
neural cell adhesion molecule 1
ISO
RGD
PMID:18757519
RGD:2326023
NCBI chr 9:40,628,602...40,960,605
Ensembl chr 9:40,628,631...40,960,591
G
NEFM
neurofilament medium chain
ISO
RGD
PMID:8501527
RGD:9743936
NCBI chr14:8,955,346...8,967,211
G
NEO1
neogenin 1
ISO
protein:increased expression:retina
RGD
PMID:21887516
RGD:9850142
NCBI chr 7:60,064,984...60,299,892
Ensembl chr 7:60,064,994...60,300,562
G
NGF
nerve growth factor
ISO
protein:increased expression:retina
RGD
PMID:28067793
RGD:402463954
NCBI chr 4:105,256,691...105,307,843
Ensembl chr 4:105,256,749...105,307,837
G
NGFR
nerve growth factor receptor
ISO
RGD
PMID:20943663
RGD:5508695
NCBI chr12:25,699,410...25,720,355
Ensembl chr12:25,699,427...25,720,356
G
NTRK1
neurotrophic receptor tyrosine kinase 1
ISO
RGD
PMID:20943663
RGD:5508695
NCBI chr 4:93,219,509...93,237,944
Ensembl chr 4:93,219,516...93,255,981
G
NTRK2
neurotrophic receptor tyrosine kinase 2
treatment
ISO
RGD
PMID:20357199 PMID:34245756
RGD:5684908 RGD:597015764
NCBI chr10:30,030,050...30,429,938
Ensembl chr10:30,033,405...30,429,882
G
PAWR
pro-apoptotic WT1 regulator
ISO
mRNA:increased expression:retina:
RGD
PMID:12836167
RGD:1299297
NCBI chr 5:101,693,145...101,797,842
Ensembl chr 5:101,693,246...101,797,838
G
PAX6
paired box 6
ISO
protein:increased expression:retina (rat)
RGD
PMID:23297010
RGD:8552379
NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,978,287...29,001,200
G
PDGFB
platelet derived growth factor subunit B
ISO
protein:decreased expression:nerve fiber:
RGD
PMID:9893812
RGD:10449496
Ensembl chr 5:8,986,462...9,007,435
G
PECAM1
platelet and endothelial cell adhesion molecule 1
ISO
protein:increased expression:optic nerve (rat)
RGD
PMID:22336118
RGD:6767293
NCBI chr12:14,667,643...14,723,296
Ensembl chr12:14,649,044...14,723,293
G
PLAU
plasminogen activator, urokinase
ISO
mRNA:increased expression:optic nerve (rat)
RGD
PMID:20798533
RGD:6483802
NCBI chr14:76,629,313...76,635,173
Ensembl chr14:76,629,299...76,635,172
G
PTPN5
protein tyrosine phosphatase non-receptor type 5
ISO
protein:increased expression:retina (rat)
RGD
PMID:15555919
RGD:9835027
NCBI chr 2:40,458,865...40,521,470
Ensembl chr 2:40,459,049...40,521,461
G
RHOA
ras homolog family member A
ISO
protein:increased expression, altered localization:retina
RGD
PMID:17534117
RGD:1642826
NCBI chr13:31,918,484...31,991,207
Ensembl chr13:31,918,834...31,986,607
G
SNW1
SNW domain containing 1
ISO
protein:increased expression:retina (rat)
RGD
PMID:25074585
RGD:11035254
NCBI chr 7:100,718,298...100,749,414
Ensembl chr 7:100,718,036...100,749,356
G
TLR2
toll like receptor 2
treatment
ISO
RGD
PMID:19661221
RGD:597538516
NCBI chr 8:75,416,257...75,428,370
Ensembl chr 8:75,411,993...75,428,330
G
TLR4
toll like receptor 4
ISO
protein:increased expression:optic nerve
RGD
PMID:23103505
RGD:7794777
NCBI chr 1:258,044,610...258,054,641
Ensembl chr 1:258,044,610...258,058,970
G
TNFRSF1A
TNF receptor superfamily member 1A
ISO
RGD
PMID:14697498 PMID:18552980
RGD:7794683 RGD:8661743
NCBI chr 5:64,319,349...64,331,876
Ensembl chr 5:64,319,051...64,331,909
G
TRADD
TNFRSF1A associated via death domain
ISO
protein:increased expression: retina
RGD
PMID:18552980
RGD:7794683
NCBI chr 6:27,797,594...27,804,654
Ensembl chr 6:27,797,607...27,804,423
G
YBX3
Y-box binding protein 3
ISO
mRNA:increased expression:retinal ganglion cell
RGD
PMID:11750989
RGD:2311250
NCBI chr 5:61,337,868...61,361,269
Ensembl chr 5:61,337,862...61,361,279
G
FGF2
fibroblast growth factor 2
ISO
mRNA:increased expression:retina
RGD
PMID:9268592
RGD:8655567
NCBI chr 8:101,278,877...101,344,084
Ensembl chr 8:101,278,885...101,343,916
G
NEO1
neogenin 1
ISO
protein:increased expression:retina
RGD
PMID:21887516
RGD:9850142
NCBI chr 7:60,064,984...60,299,892
Ensembl chr 7:60,064,994...60,300,562
G
RGMA
repulsive guidance molecule BMP co-receptor a
ISO
protein:increased expression:retina
RGD
PMID:21887516
RGD:9850142
NCBI chr 7:85,921,524...85,968,887
Ensembl chr 7:85,921,594...85,968,888
G
ENTPD1
ectonucleoside triphosphate diphosphohydrolase 1
ISO
protein:increased expression,increased activity:cerebral cortex:
RGD
PMID:16672190
RGD:9685448
NCBI chr14:107,263,546...107,390,923
Ensembl chr14:107,263,449...107,389,010
G
FGFR1
fibroblast growth factor receptor 1
ISO
mRNA,protein:increased expression:astrocyte,macrophage,neutrophil:
RGD
PMID:11168551
RGD:10402049
NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,724
G
GFAP
glial fibrillary acidic protein
ISO
RGD
PMID:10225952
RGD:6480471
NCBI chr12:18,456,268...18,466,594
Ensembl chr12:18,456,263...18,466,592
G
PDGFB
platelet derived growth factor subunit B
ISO
protein:increased expression:neuron:
RGD
PMID:7526956
RGD:10449485
Ensembl chr 5:8,986,462...9,007,435
G
VIM
vimentin
ISO
RGD
PMID:10225952
RGD:6480471
NCBI chr10:43,516,441...43,526,172
Ensembl chr10:43,517,307...43,526,170
G
TRH
thyrotropin releasing hormone
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:8690305
NCBI chr13:69,362,892...69,366,183
Ensembl chr13:69,364,093...69,365,493
G
BMP4
bone morphogenetic protein 4
treatment
ISO
RGD
PMID:16332232
RGD:8699514
NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637
G
IGF1
insulin like growth factor 1
ISO
protein:decreased expression:serum:
RGD
PMID:12002507
RGD:8548865
NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,033
G
PLAT
plasminogen activator, tissue type
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:1899364
NCBI chr17:11,195,599...11,223,821
Ensembl chr17:11,195,602...11,224,032
G
ADAM10
ADAM metallopeptidase domain 10
ISO
RGD
PMID:22489706
RGD:13703033
NCBI chr 1:113,289,480...113,407,940
Ensembl chr 1:113,289,209...113,412,798
G
AHR
aryl hydrocarbon receptor
ISO
protein:increased expression:T cell, neuron, brain cortex, hippocampus
RGD
PMID:27506546
RGD:405878081
NCBI chr 9:86,511,866...86,555,950
Ensembl chr 9:86,511,369...86,555,943
G
APP
amyloid beta precursor protein
treatment
ISO
RGD
PMID:29320530
RGD:13782048
NCBI chr13:189,434,854...189,716,120
Ensembl chr13:189,435,094...189,716,056
G
BAD
BCL2 associated agonist of cell death
treatment
ISO
RGD
PMID:24582457
RGD:13782254
NCBI chr 2:7,831,192...7,842,864
Ensembl chr 2:7,830,920...7,842,863
G
BDNF
brain derived neurotrophic factor
ISO
mRNA:increased expression:CA3 field of hippocampus, dentate gyrus
RGD
PMID:10925157
RGD:596936229
NCBI chr 2:32,623,668...32,679,293
Ensembl chr 2:32,624,048...32,679,765
G
BID
BH3 interacting domain death agonist
severity disease_progression
ISO
RGD
PMID:12172380 PMID:15307896
RGD:5509821 RGD:632018
NCBI chr 5:69,849,007...69,874,647
Ensembl chr 5:69,849,002...69,875,853
G
CAPN1
calpain 1
severity
ISO
protein:increased expression:cytosol, plasma membrane
RGD
PMID:9469158 PMID:15307896
RGD:13792664 RGD:5509821
NCBI chr 2:6,997,513...7,024,410
Ensembl chr 2:6,997,985...7,022,684
G
CAPN2
calpain 2
severity
ISO
RGD
PMID:9469158 PMID:15307896
RGD:13792664 RGD:5509821
NCBI chr10:19,758,824...19,820,241
Ensembl chr10:19,758,757...19,820,246
G
CASP3
caspase 3
severity
ISO
protein:increased expression:cerebral cortex
RGD
PMID:15307896 PMID:27614125
RGD:329961568 RGD:5509821
NCBI chr15:45,744,320...45,753,252
Ensembl chr15:45,742,751...45,764,213
G
CASP8
caspase 8
severity disease_progression
ISO
RGD
PMID:12172380 PMID:15307896
RGD:5509821 RGD:632018
NCBI chr15:104,923,659...104,948,470
Ensembl chr15:104,923,953...104,948,468
G
CASP9
caspase 9
severity disease_progression
ISO
RGD
PMID:12172380 PMID:15307896
RGD:5509821 RGD:632018
NCBI chr 6:74,707,597...74,730,033
Ensembl chr 6:74,706,516...74,730,007
G
CCNG1
cyclin G1
treatment
ISO
RGD
PMID:18612315 PMID:24398934
RGD:151356934 RGD:151356935
NCBI chr16:60,349,255...60,356,737
Ensembl chr16:60,349,258...60,356,738
G
CD163
CD163 molecule
ISO
protein:increased expression:brain, macrophage (rat)
RGD
PMID:22583855
RGD:127285798
NCBI chr 5:63,300,200...63,334,497
Ensembl chr 5:63,300,231...63,334,498
G
CD8A
CD8 subunit alpha
ISO
mRNA:increased expression:brain (mouse)
RGD
PMID:31383034
RGD:124715446
NCBI chr 3:57,999,228...58,029,768
Ensembl chr 3:57,998,891...58,029,760
G
CIT
citron rho-interacting serine/threonine kinase
ISO
mRNA:decreased expression:cerebral cortex��(rat)
RGD
PMID:12503083
RGD:2317873
NCBI chr14:33,009,828...33,195,985
Ensembl chr14:33,009,877...33,196,286
G
CTNNB1
catenin beta 1
treatment
ISO
RGD
PMID:26296359
RGD:597538582
NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311
G
CXCL10
C-X-C motif chemokine ligand 10
treatment
ISO
RGD
PMID:26435412
RGD:27095897
NCBI chr 8:71,693,641...71,695,948
Ensembl chr 8:71,693,339...71,695,948
G
CXCL12
C-X-C motif chemokine ligand 12
ISO
protein:increased expression:cerebral cortex
RGD
PMID:27614125
RGD:329961568
NCBI chr14:91,516,383...91,543,857
Ensembl chr14:91,516,431...91,552,752
G
CYP2D6
cytochrome P450 family 2 subfamily D member 6
treatment
ISO
RGD
PMID:26068867
RGD:401901590
NCBI chr 5:6,539,021...6,543,643
Ensembl chr 5:6,538,907...6,543,642
G
DRD1
dopamine receptor D1
treatment
ISO
RGD
PMID:24047867
RGD:13506948
NCBI chr16:49,189,555...49,193,722
Ensembl chr16:49,189,602...49,191,976
G
DRD2
dopamine receptor D2
treatment
ISO
RGD
PMID:24047867
RGD:13506948
NCBI chr 9:41,068,618...41,135,262
Ensembl chr 9:41,068,779...41,133,599
G
FTO
FTO alpha-ketoglutarate dependent dioxygenase
ISO
mRNA:decreased expression:cerebral cortex
RGD
PMID:31992337
RGD:329901857
NCBI chr 6:31,177,112...31,564,674
Ensembl chr 6:31,174,569...31,564,718
G
FUBP1
far upstream element binding protein 1
ISO
RGD
PMID:23797733
RGD:13673879
NCBI chr 6:135,281,474...135,319,055
Ensembl chr 6:135,281,521...135,318,714
G
GNAL
G protein subunit alpha L
ISO
RGD
PMID:29215295
RGD:13513923
NCBI chr 6:97,342,468...97,429,334
Ensembl chr 6:97,342,474...97,429,364
G
GRIA1
glutamate ionotropic receptor AMPA type subunit 1
ISO
protein:increased phosphorylation:central amygdaloid nucleus (rat)
RGD
PMID:30638118
RGD:405101698
NCBI chr16:69,332,786...69,654,366
Ensembl chr16:69,332,587...69,655,380
G
ICAM1
intercellular adhesion molecule 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:28642177
NCBI chr 2:69,097,136...69,107,722
Ensembl chr 2:69,097,122...69,108,205
G
ITGB1
integrin subunit beta 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:25668593
NCBI chr10:56,078,393...56,130,608
Ensembl chr10:56,078,396...56,173,326
G
LAMA1
laminin subunit alpha 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:25668593
NCBI chr 6:100,332,843...100,468,457
Ensembl chr 6:100,332,956...100,468,454
G
LAMP2
lysosomal associated membrane protein 2
ISO
protein:increased expression:hippocampus:
RGD
PMID:28365875
RGD:13703062
NCBI chr X:98,586,718...98,623,939
Ensembl chr X:98,581,992...98,623,940
G
LCN2
lipocalin 2
ISO
RGD
PMID:31539545
RGD:126781751
NCBI chr 1:268,609,975...268,614,651
Ensembl chr 1:268,609,887...268,614,644
G
LOC110258578
interleukin-1 beta-like
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:28642177
G
MAPT
microtubule associated protein tau
treatment
ISO
RGD
PMID:25771151 PMID:26484783 PMID:26729399 PMID:28412141
RGD:13800902 RGD:13800909 RGD:13800912 RGD:13800917
NCBI chr12:17,098,259...17,211,483
Ensembl chr12:17,095,587...17,211,373
G
METTL14
methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit
ISO
mRNA:decreased expression:cerebral cortex
RGD
PMID:31992337
RGD:329901857
NCBI chr 8:105,019,539...105,053,603
Ensembl chr 8:105,015,420...105,053,563
G
MIR155
microRNA mir-155
ISO
RGD
PMID:28804446
RGD:25314324
NCBI chr13:189,138,822...189,138,902
Ensembl chr13:189,138,822...189,138,902
G
MMP2
matrix metallopeptidase 2
ISO
protein:increased expression:cerebral cortex
RGD
PMID:27614125
RGD:329961568
NCBI chr 6:30,059,247...30,087,031
Ensembl chr 6:30,058,595...30,086,982
G
MMP9
matrix metallopeptidase 9
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:25668593
NCBI chr17:48,179,690...48,186,782
Ensembl chr17:48,179,671...48,186,788
G
MPO
myeloperoxidase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:25668593
NCBI chr12:34,557,031...34,570,091
Ensembl chr12:34,556,408...34,567,904
G
NCSTN
nicastrin
ISO
RGD
PMID:18240300
RGD:13801189
NCBI chr 4:90,121,209...90,142,934
Ensembl chr 4:90,119,002...90,142,890
G
NFE2L2
NFE2 like bZIP transcription factor 2
ISO
protein:increased expression:brain:
RGD
PMID:30855558
RGD:26884463
NCBI chr15:82,967,485...83,146,185
Ensembl chr15:82,973,656...83,146,183
G
NGF
nerve growth factor
treatment
ISO
RGD
PMID:26285082
RGD:402463964
NCBI chr 4:105,256,691...105,307,843
Ensembl chr 4:105,256,749...105,307,837
G
NMNAT1
nicotinamide nucleotide adenylyltransferase 1
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:27822499
NCBI chr 6:70,271,296...70,307,403
Ensembl chr 6:70,272,014...70,310,707
G
NOS2
nitric oxide synthase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:28642177
NCBI chr12:44,174,944...44,219,875
Ensembl chr12:44,174,948...44,218,146
G
NOX1
NADPH oxidase 1
ISO
protein:increased expression:cerebral cortex
RGD
PMID:27614125
RGD:329961568
NCBI chr X:82,540,664...82,575,811
Ensembl chr X:82,540,667...82,586,532
G
NR3C1
nuclear receptor subfamily 3 group C member 1
ISO
protein:increased phosphorylation:amygdala mRNA:decreased expression:hippocampus, hypothalamus
RGD
PMID:30638118 PMID:36637480
RGD:405101698 RGD:408364984
NCBI chr 2:144,822,937...144,956,451
Ensembl chr 2:144,822,939...144,956,451
G
NTRK2
neurotrophic receptor tyrosine kinase 2
ISO
mRNA:increased expression:dentate gyrus
RGD
PMID:10925157
RGD:596936229
NCBI chr10:30,030,050...30,429,938
Ensembl chr10:30,033,405...30,429,882
G
OCLN
occludin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:25668593
NCBI chr16:47,600,175...47,652,435
Ensembl chr16:47,600,212...47,654,033
G
PARP1
poly(ADP-ribose) polymerase 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15829224 PMID:28642177
NCBI chr10:14,203,157...14,241,164
Ensembl chr10:14,203,160...14,241,196
G
PDE10A
phosphodiesterase 10A
ISO
RGD
PMID:29215295
RGD:13513923
NCBI chr 1:3,120,418...3,394,236
Ensembl chr 1:2,829,411...3,392,651
G
PDYN
prodynorphin
ISO
mRNA:increased expression:hippocampus
RGD
PMID:12626770
RGD:633616
NCBI chr17:33,505,075...33,521,534
Ensembl chr17:33,505,079...33,521,532
G
PHACTR1
phosphatase and actin regulator 1
treatment
ISO
RGD
PMID:36571365
RGD:401901253
NCBI chr 7:9,105,422...9,666,886
Ensembl chr 7:9,105,874...9,666,881
G
PPP3R1
protein phosphatase 3 regulatory subunit B, alpha
ISO
RGD
PMID:20713027
RGD:13830881
NCBI chr 3:74,004,620...74,068,173
Ensembl chr 3:74,000,517...74,068,172
G
PPP3R2
protein phosphatase 3 regulatory subunit B, beta
ISO
RGD
PMID:20713027
RGD:13830881
NCBI chr 1:243,284,383...243,285,358
G
PSEN1
presenilin 1
ISO
RGD
PMID:18240300
RGD:13801189
NCBI chr 7:96,478,179...96,567,884
Ensembl chr 7:96,478,190...96,569,130
G
PTGS2
prostaglandin-endoperoxide synthase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:28642177
NCBI chr 9:127,850,164...127,858,866
Ensembl chr 9:127,850,015...127,858,884
G
RELA
RELA proto-oncogene, NF-kB subunit
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:25668593 PMID:28642177
NCBI chr 2:6,594,869...6,602,684
Ensembl chr 2:6,593,969...6,603,469
G
SOX2
SRY-box transcription factor 2
treatment
ISO
RGD
PMID:26296359
RGD:597538582
NCBI chr13:119,668,476...119,669,435
Ensembl chr13:119,668,476...119,669,435
G
TGFB1
transforming growth factor beta 1
treatment
ISO
RGD
PMID:28433746
RGD:14995478
NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046
G
TNF
tumor necrosis factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:28642177
NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,628...23,702,415
G
TP53
tumor protein p53
treatment
ISO
RGD
PMID:27553877
RGD:14995939
NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,644...52,953,818
G
UBE4B
ubiquitination factor E4B
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:27822499
NCBI chr 6:70,345,789...70,462,434
Ensembl chr 6:70,345,813...70,462,434
G
WNT3A
Wnt family member 3A
treatment
ISO
RGD
PMID:26296359
RGD:597538582
NCBI chr 2:51,153,978...51,203,678
Ensembl chr 2:51,153,970...51,202,176
G
F7
coagulation factor VII
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:20370756
NCBI chr11:78,512,389...78,518,668
Ensembl chr11:78,512,137...78,518,668
G
ABCC8
ATP binding cassette subfamily C member 8
treatment
ISO
RGD
PMID:18854840
RGD:2325137
NCBI chr 2:41,666,974...41,754,624
Ensembl chr 2:41,666,909...41,754,620
G
TP53
tumor protein p53
ISO
RGD
PMID:22977862
RGD:8547771
NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,644...52,953,818
G
ADRB2
adrenoceptor beta 2
ISO
mRNA:increased expression:Vestibulocochlear nerve:
RGD
PMID:22178544
RGD:8548530
NCBI chr 2:150,032,649...150,035,591
Ensembl chr 2:150,033,579...150,040,731
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all