RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term: Craniocerebral Trauma
Accession: DOID:9007621
browse the term
Definition: Traumatic injuries involving the cranium and intracranial structures (i.e., BRAIN; CRANIAL NERVES; MENINGES; and other structures). Injuries may be classified by whether or not the skull is penetrated (i.e., penetrating vs. nonpenetrating) or whether there is an associated hemorrhage.
Synonyms: exact_synonym: Craniocerebral Injuries; Craniocerebral Injury; Craniocerebral Traumas; Crushing Skull Injuries; Crushing Skull Injury; Forehead Trauma; Forehead Traumas; Frontal Region Trauma; Frontal Region Traumas; Head Injuries; Head Injury; Head Trauma; Head Traumas; Minor Head Injuries; Minor Head Injury; Multiple Head Injuries; Multiple Head Injury; Occipital Region Trauma; Occipital Region Traumas; Occipital Trauma; Occipital Traumas; Open Head Injuries; Open Head Injury; Parietal Region Trauma; Parietal Region Traumas; Superficial Head Injuries; Superficial Head Injury; Temporal Region Trauma; Temporal Region Traumas
primary_id: MESH:D006259 ; RDO:0005059
xref: EFO:0009505
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ADNP
activity dependent neuroprotector homeobox
ISO
RGD
PMID:11123362
RGD:2312784
NCBI chr20:47,233,696...47,276,075
Ensembl chr20:48,361,043...48,400,387
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IL1A
interleukin 1 alpha
ISO
protein:increased expression:microglial cell
RGD
PMID:7830934
RGD:10045949
NCBI chr2A:89,273,482...89,284,421
Ensembl chr2A:113,784,854...113,795,801
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POSTN
periostin
ISO
RGD
PMID:17878602
RGD:10041014
NCBI chr13:18,779,297...18,815,207
Ensembl chr13:37,368,030...37,407,212
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SERPINC1
serpin family C member 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:8810955
NCBI chr 1:149,421,737...149,435,301
Ensembl chr 1:153,126,031...153,139,369
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EPO
erythropoietin
treatment
ISO
RGD
PMID:23415790
RGD:10401075
NCBI chr 7:92,747,671...92,750,886
Ensembl chr 7:106,148,062...106,150,974
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F7
coagulation factor VII
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:12503044
NCBI chr13:94,246,694...94,261,133
Ensembl chr13:113,315,868...113,329,995
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KCNN4
potassium calcium-activated channel subfamily N member 4
treatment
ISO
RGD
PMID:15379997
RGD:329969897
NCBI chr19:40,715,621...40,735,025
Ensembl chr19:49,321,403...49,335,900
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CFL1
cofilin 1
treatment
ISO
RGD
PMID:25708984
RGD:12738361
NCBI chr11:61,215,092...61,218,628
Ensembl chr11:64,544,275...64,550,806
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DRD2
dopamine receptor D2
ISO
RGD
PMID:26448536
RGD:13506960
NCBI chr11:108,289,838...108,357,174
Ensembl chr11:112,132,703...112,198,935
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DRD3
dopamine receptor D3
ISO
RGD
PMID:26448536
RGD:13506960
NCBI chr 3:111,265,834...111,317,176
Ensembl chr 3:118,187,636...118,237,403
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DRD4
dopamine receptor D4
ISO
RGD
PMID:26448536
RGD:13506960
NCBI chr11:640,401...646,775
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IL6
interleukin 6
treatment
ISO
RGD
PMID:27113205
RGD:11062140
NCBI chr 7:23,415,922...23,420,767
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C3
complement C3
ameliorates
ISO
RGD
PMID:31654641
RGD:408418727
NCBI chr19:5,708,211...5,753,178
Ensembl chr19:6,629,287...6,674,699
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CASP3
caspase 3
treatment
ISO
RGD
PMID:28140659
RGD:13782305
NCBI chr 4:176,793,190...176,815,023
Ensembl chr 4:189,018,422...189,040,185
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CASP8
caspase 8
treatment
ISO
RGD
PMID:28140659
RGD:13782305
NCBI chr2B:88,490,611...88,542,132
Ensembl chr2B:206,669,544...206,696,468
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IL1B
interleukin 1 beta
treatment
ISO
RGD
PMID:31654641
RGD:408418727
NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
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PYCARD
PYD and CARD domain containing
treatment
ISO
RGD
PMID:19401709
RGD:5491174
NCBI chr16:23,764,386...23,765,732
Ensembl chr16:31,571,363...31,573,828
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TNF
tumor necrosis factor
treatment
ISO
RGD
PMID:31654641
RGD:408418727
NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
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ABCC8
ATP binding cassette subfamily C member 8
treatment
ISO
RGD
PMID:21107131
RGD:12791995
NCBI chr11:17,447,564...17,531,513
Ensembl chr11:17,133,063...17,216,870
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ACAN
aggrecan
ISO
mRNA:increased expression:fascia dentata (rat)
RGD
PMID:18511192
RGD:2315807
NCBI chr15:67,492,494...67,563,265
Ensembl chr15:86,733,853...86,771,420
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ACTR2
actin related protein 2
ISO
mRNA, protein:decreased expression:hippocampus (rat)
RGD
PMID:22120305
RGD:11530046
NCBI chr2A:65,289,675...65,333,219
Ensembl chr2A:66,413,011...66,456,857
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ADCYAP1
adenylate cyclase activating polypeptide 1
ISO
RGD
PMID:16689670
RGD:2325298
NCBI chr18:13,414,618...13,421,668
Ensembl chr18:15,713,479...15,717,749
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ADRA1A
adrenoceptor alpha 1A
ISO
mRNA:increased expression:frontal cortex
RGD
PMID:20974230
RGD:5688366
NCBI chr 8:25,947,996...26,138,022
Ensembl chr 8:22,853,677...23,044,388
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AGER
advanced glycosylation end-product specific receptor
ISO
protein:increased expression:brain (rat)
RGD
PMID:22491548 PMID:22915134 PMID:24859607
RGD:7245513 RGD:7245557 RGD:8696001
NCBI chr 6:31,828,363...31,831,981
Ensembl chr 6:32,708,251...32,711,641
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AIF1
allograft inflammatory factor 1
ISO
protein:increased expression:cerebral cortex (rat)
RGD
PMID:19520144
RGD:2313020
NCBI chr 6:31,276,215...31,278,051
Ensembl chr 6:32,166,301...32,168,125
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AIFM1
apoptosis inducing factor mitochondria associated 1
ISO
protein:increased expression:nucleus:
RGD
PMID:12091479
RGD:10053567
NCBI chr X:119,256,425...119,292,612
Ensembl chr X:129,550,287...129,586,271
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AKT1
AKT serine/threonine kinase 1
ISO
protein:increased phosphorylation:brain, neuron
RGD
PMID:16234845
RGD:5509090
NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756
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ALB
albumin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:7909931 PMID:17188501
NCBI chr 4:50,773,244...50,790,474
Ensembl chr 4:56,605,322...56,622,418
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AMBP
alpha-1-microglobulin/bikunin precursor
ISO
protein:increased expression:urine
RGD
PMID:14592616
RGD:6904155
NCBI chr 9:85,157,680...85,176,253
Ensembl chr 9:113,525,835...113,543,422
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ANK3
ankyrin 3
ISO
RGD
PMID:20557305
RGD:6767288
NCBI chr10:56,560,589...57,269,952
Ensembl chr10:58,790,696...59,602,954
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ANP32A
acidic nuclear phosphoprotein 32 family member A
ISO
RGD
PMID:24385964
RGD:10401136
NCBI chr15:47,736,770...47,778,763
Ensembl chr15:66,502,285...66,511,637
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APAF1
apoptotic peptidase activating factor 1
ISO
protein:increased expression:cerebral cortex
RGD
PMID:11567033
RGD:2325751
NCBI chr12:96,224,515...96,311,246
Ensembl chr12:99,637,622...99,726,939
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APBB1
amyloid beta precursor protein binding family B member 1
ISO
mRNA:increased expression:brain
RGD
PMID:12707777
RGD:2301208
NCBI chr11:6,526,477...6,550,509
Ensembl chr11:6,209,812...6,225,972
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APEX1
apurinic/apyrimidinic endodeoxyribonuclease 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:11447995
NCBI chr14:1,329,745...1,332,315
Ensembl chr14:19,381,911...19,384,542
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APOD
apolipoprotein D
ISO
mRNA, protein:increased expression:cerebral cortex, glia cell, neuron
RGD
PMID:10501208
RGD:2311202
NCBI chr 3:192,852,887...192,868,233
Ensembl chr 3:203,152,476...203,168,060
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APP
amyloid beta precursor protein
ISO
protein:increased expression:hippocampus
RGD
PMID:16300758
RGD:10054281
NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072
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AQP4
aquaporin 4
ISO
protein:increased expression:cerebral cortex
RGD
PMID:21083433 PMID:21488209
RGD:5148014 RGD:5148034
NCBI chr18:20,108,607...20,122,381
Ensembl chr18:23,713,146...23,726,919
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ASIC1
acid sensing ion channel subunit 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21307247
NCBI chr12:38,672,253...38,698,247
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ASTN1
astrotactin 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:14499481
NCBI chr 1:152,385,103...152,688,885
Ensembl chr 1:156,085,398...156,284,771
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ATG12
autophagy related 12
ISO
protein:altered localization:brain
RGD
PMID:18059433
RGD:2301217
NCBI chr 5:111,184,617...111,196,038
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ATP5PD
ATP synthase peripheral stalk subunit d
treatment
ISO
RGD
PMID:26813465
RGD:13800884
NCBI chr17:68,986,362...68,994,246
Ensembl chr17:74,541,363...74,549,700
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AVPR1A
arginine vasopressin receptor 1A
ISO
mRNA:increased expression:cerebral cortex
RGD
PMID:17244947
RGD:2300372
NCBI chr12:25,793,633...25,803,026
Ensembl chr12:26,065,882...26,075,972
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BAD
BCL2 associated agonist of cell death
ISO
mRNA, protein:increased expression:cerebral cortex
RGD
PMID:15941375
RGD:2292694
NCBI chr11:59,626,981...59,641,824
Ensembl chr11:62,971,808...62,986,257
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BAX
BCL2 associated X, apoptosis regulator
treatment
ISO
RGD
PMID:20888848
RGD:10054247
NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468
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BCAT1
branched chain amino acid transaminase 1
ISO
Protein:increased expression:neurons
RGD
PMID:10686349
RGD:631308
NCBI chr12:61,364,154...61,500,827
Ensembl chr12:63,978,116...64,107,463
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BCL2
BCL2 apoptosis regulator
treatment
ISO
RGD
PMID:18093155 PMID:20888848
RGD:10054247 RGD:2293059
NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100
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BDNF
brain derived neurotrophic factor
ISO
CTD Direct Evidence: marker/mechanism|therapeutic
RGD CTD
PMID:15500971 PMID:20544832 PMID:21269288
RGD:4891136
NCBI chr11:27,618,322...27,687,661
Ensembl chr11:27,520,312...27,589,239
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BECN1
beclin 1
ISO
protein:increased expression:brain CTD Direct Evidence: therapeutic protein:increased expression:hippocampus protein:increased expression:neuron, astrocyte
RGD CTD
PMID:16874043 PMID:18500386 PMID:24221859 PMID:34929507
RGD:11558018 RGD:6483098 RGD:6483314
NCBI chr17:14,493,619...14,507,809
Ensembl chr17:14,719,781...14,733,286
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BIRC5
baculoviral IAP repeat containing 5
ISO
mRNA, protein:increased expression:brain, astrocyte, neuron
RGD
PMID:15453988
RGD:2293136
NCBI chr17:72,292,332...72,303,493
Ensembl chr17:77,842,724...77,854,159
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BMP6
bone morphogenetic protein 6
ISO
protein:increased expression:brain, astrocyte, neuron
RGD
PMID:16388909
RGD:2289020
NCBI chr 6:7,564,164...7,720,341
Ensembl chr 6:7,848,249...8,000,649
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BMPR2
bone morphogenetic protein receptor type 2
ISO
mRNA:increased expression:dentate gyrus, neuron
RGD
PMID:9080432
RGD:5129488
NCBI chr2B:89,631,622...89,823,438
Ensembl chr2B:207,780,741...207,961,072
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BYSL
bystin like
ISO
mRNA, protein:increased expression:substantia nigra, striatum (rat)
RGD
PMID:15305856
RGD:2316201
NCBI chr 6:41,504,652...41,516,541
Ensembl chr 6:42,806,531...42,821,518
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C3
complement C3
ISO
RGD
PMID:23808389
RGD:10054313
NCBI chr19:5,708,211...5,753,178
Ensembl chr19:6,629,287...6,674,699
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CASK
calcium/calmodulin dependent serine protein kinase
ISO
RGD
PMID:25089700
RGD:11576302
NCBI chr X:33,967,329...34,374,385
Ensembl chr X:41,659,295...42,066,570
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CASP1
caspase 1
ISO
mRNA, protein:increased expression:brain
RGD
PMID:17188500
RGD:2315917
NCBI chr11:99,965,964...99,975,640
Ensembl chr11:103,448,497...103,458,149 Ensembl chr11:103,448,497...103,458,149
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CASP3
caspase 3
treatment
ISO
RGD
PMID:20888848
RGD:10054247
NCBI chr 4:176,793,190...176,815,023
Ensembl chr 4:189,018,422...189,040,185
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CASP8
caspase 8
ISO
protein:altered localization
RGD
PMID:15590916
RGD:1624191
NCBI chr2B:88,490,611...88,542,132
Ensembl chr2B:206,669,544...206,696,468
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CAST
calpastatin
severity
ISO
mRNA:increased expression:cerebral cortex
RGD
PMID:15307896
RGD:5509821
NCBI chr 5:91,972,572...92,084,657
Ensembl chr 5:97,527,071...97,636,650
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CCL2
C-C motif chemokine ligand 2
treatment
ISO
CTD Direct Evidence: marker/mechanism protein:increased expression:brain, neuron
RGD CTD
PMID:11113322 PMID:19210118 PMID:21549006
RGD:2306999 RGD:9587789
NCBI chr17:22,528,154...22,530,091
Ensembl chr17:22,820,890...22,823,384
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CCL20
C-C motif chemokine ligand 20
treatment
ISO
RGD
PMID:22040257
RGD:7483630
NCBI chr2B:115,052,768...115,056,479
Ensembl chr2B:233,862,505...233,866,225
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CCR5
C-C motif chemokine receptor 5
ISO
mRNA:increased expression:hippocampus
RGD
PMID:24344922
RGD:8552265
NCBI chr 3:46,273,096...46,278,471
Ensembl chr 3:47,380,321...47,381,379
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CD14
CD14 molecule
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr 5:135,996,265...135,997,909
Ensembl chr 5:142,113,082...142,118,966
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CD40
CD40 molecule
treatment
ISO
RGD
PMID:23924471
RGD:7248749
NCBI chr20:42,455,711...42,467,139
Ensembl chr20:43,541,619...43,552,994
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CD40LG
CD40 ligand
treatment
ISO
RGD
PMID:11755016 PMID:25972624
RGD:11344972 RGD:8547803
NCBI chr X:125,776,138...125,788,820
Ensembl chr X:136,042,849...136,058,202
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CDKN1A
cyclin dependent kinase inhibitor 1A
ISO
protein:increased expression:nucleus:
RGD
PMID:9914434
RGD:8662346
NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599
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CDKN1B
cyclin dependent kinase inhibitor 1B
ISO
protein:decreased expression:cerebral cortex
RGD
PMID:21728064
RGD:10045359
NCBI chr12:12,742,258...12,747,404
Ensembl chr12:13,120,306...13,125,541
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CEBPA
CCAAT enhancer binding protein alpha
ISO
mRNA, protein:increased expression:cerebral cortex (mouse)
RGD
PMID:19833158
RGD:10401206
NCBI chr19:30,223,567...30,226,204
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CEBPB
CCAAT enhancer binding protein beta
ISO
CTD Direct Evidence: marker/mechanism mRNA, protein:increased expression:cerebral cortex (mouse)
CTD RGD
PMID:19833158 PMID:21549006
RGD:10401206
NCBI chr20:46,533,163...46,535,282
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CFB
complement factor B
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17474994
NCBI chr 6:31,606,716...31,612,782
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CHRM2
cholinergic receptor muscarinic 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 7:128,827,089...128,978,496
Ensembl chr 7:141,466,396...141,467,796
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CLEC4E
C-type lectin domain family 4 member E
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr12:8,620,618...8,627,610
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CNP
2',3'-cyclic nucleotide 3' phosphodiesterase
ISO
protein:increased expression:hippocampus
RGD
PMID:20215974
RGD:6483336
NCBI chr17:15,338,085...15,349,089
Ensembl chr17:15,560,056...15,568,916
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COMT
catechol-O-methyltransferase
ISO
protein:increased expression:hippocampus
RGD
PMID:17240060
RGD:2289740
NCBI chr22:2,704,015...2,731,326
Ensembl chr22:18,375,434...18,402,387
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CRP
C-reactive protein
disease_progression
ISO
RGD
PMID:24456846
RGD:9585646
NCBI chr 1:135,062,102...135,064,402
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CSF2
colony stimulating factor 2
disease_progression
ISO
RGD
PMID:21515263
RGD:5686795
NCBI chr 5:127,496,951...127,499,325
Ensembl chr 5:133,660,775...133,663,146
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CSF3
colony stimulating factor 3
treatment
ISO
CTD Direct Evidence: marker/mechanism
CTD RGD
PMID:21549006 PMID:24239694
RGD:11039431
NCBI chr17:17,271,074...17,273,493
Ensembl chr17:17,491,276...17,493,729
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CSPG4
chondroitin sulfate proteoglycan 4
ISO
protein:altered expression:cerebral cortex
RGD
PMID:19473238
RGD:5686860
NCBI chr15:54,583,010...54,621,240
Ensembl chr15:74,177,909...74,200,498
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CUL5
cullin 5
ISO
mRNA, protein:decreased expression:cerebral cortex, hippocampus
RGD
PMID:17010517
RGD:2301432
NCBI chr11:102,895,611...102,994,447
Ensembl chr11:106,371,759...106,469,989
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CXCL10
C-X-C motif chemokine ligand 10
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr 4:48,182,355...48,184,733
Ensembl chr 4:54,020,204...54,022,606
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CYP11A1
cytochrome P450 family 11 subfamily A member 1
ISO
mRNA:increased expression:hindbrain
RGD
PMID:16329132
RGD:1599699
NCBI chr15:53,280,110...53,310,868
Ensembl chr15:72,901,286...72,931,164
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DAB2
DAB adaptor protein 2
ISO
RGD
PMID:15774263
RGD:7243841
NCBI chr 5:70,951,198...71,004,836
Ensembl chr 5:76,022,143...76,041,443
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DNMT1
DNA methyltransferase 1
ISO
RGD
PMID:19429151
RGD:9588608
NCBI chr19:9,681,847...9,745,334
Ensembl chr19:10,342,478...10,406,972
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DPYSL2
dihydropyrimidinase like 2
ISO
protein:increased degradation:cerebral cortex, hippocampus
RGD
PMID:17402852
RGD:2303056
NCBI chr 8:25,786,950...25,927,782
Ensembl chr 8:22,693,863...22,834,080
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DRD2
dopamine receptor D2
ISO
RGD
PMID:18509630
RGD:2311580
NCBI chr11:108,289,838...108,357,174
Ensembl chr11:112,132,703...112,198,935
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DUSP5
dual specificity phosphatase 5
ISO
mRNA:increased expression:cerebral cortex
RGD
PMID:12503083
RGD:2317873
NCBI chr10:107,091,147...107,105,971
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EIF2S1
eukaryotic translation initiation factor 2 subunit alpha
ISO
RGD
PMID:11526986
RGD:10395358
NCBI chr14:47,935,691...47,960,055
Ensembl chr14:66,813,953...66,839,866
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ELK1
ETS transcription factor ELK1
ISO
RGD
PMID:15362724
RGD:7488910
NCBI chr X:40,071,433...40,086,518
Ensembl chr X:47,967,492...47,982,579
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ENO2
enolase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:34533065
NCBI chr12:7,043,807...7,053,178
Ensembl chr12:6,958,960...6,968,342
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EPAS1
endothelial PAS domain protein 1
treatment
ISO
RGD
PMID:22960363
RGD:10395371
NCBI chr2A:46,403,411...46,492,734
Ensembl chr2A:47,332,308...47,421,560
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EPHA4
EPH receptor A4
ISO
protein:increased expression, increased activity:astrocyte
RGD
PMID:22318127
RGD:5688763
NCBI chr2B:108,664,475...108,818,802
Ensembl chr2B:227,248,958...227,402,790
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EPHX2
epoxide hydrolase 2
ISO
RGD
PMID:21075124
RGD:5688356
NCBI chr 8:26,761,090...26,818,436
Ensembl chr 8:23,964,094...24,017,749
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EPO
erythropoietin
treatment
ISO
CTD Direct Evidence: therapeutic mRNA:increased expression:brain:
CTD RGD
PMID:18093155 PMID:20833152 PMID:23063952
RGD:10401061 RGD:2293059
NCBI chr 7:92,747,671...92,750,886
Ensembl chr 7:106,148,062...106,150,974
G
EPOR
erythropoietin receptor
ISO
mRNA:increased expression:brain:
RGD
PMID:18093155
RGD:2293059
NCBI chr19:10,925,148...10,931,955
Ensembl chr19:11,635,248...11,642,383
G
F2
coagulation factor II, thrombin
severity
ISO
RGD
PMID:21355766
RGD:5147766
NCBI chr11:46,669,925...46,690,391
Ensembl chr11:47,227,891...47,249,157
G
FAS
Fas cell surface death receptor
ISO
mRNA:increased expression:hippocampus associated with Hyperoxia
RGD
PMID:16078565 PMID:19107989
RGD:1600354 RGD:8662854
NCBI chr10:85,707,457...85,741,539
Ensembl chr10:89,217,949...89,243,612
G
FGF2
fibroblast growth factor 2
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:21269288
NCBI chr 4:115,005,136...115,076,369
Ensembl chr 4:126,149,813...126,214,942
G
FMR1
fragile X messenger ribonucleoprotein 1
ISO
protein:altered localization:hippocampus (rat)
RGD
PMID:16510718
RGD:11667962
NCBI chr X:136,937,889...136,976,828
Ensembl chr X:147,365,748...147,405,321
G
FOS
Fos proto-oncogene, AP-1 transcription factor subunit
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:9630518
NCBI chr14:55,832,570...55,835,984
Ensembl chr14:74,676,316...74,679,766
G
FOXP1
forkhead box P1
treatment
ISO
RGD
PMID:26842647
RGD:11561903
NCBI chr 3:70,893,933...71,523,892
Ensembl chr 3:72,258,456...72,498,173
G
G6PD
glucose-6-phosphate dehydrogenase
ISO
protein:decreased expression:hippocampus
RGD
PMID:18501200
RGD:2307353
NCBI chr X:143,972,798...143,988,960
Ensembl chr X:153,843,092...153,860,674
G
GABRB3
gamma-aminobutyric acid type A receptor subunit beta3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr15:3,129,481...3,357,495
Ensembl chr15:23,981,359...24,058,357
G
GABRG3
gamma-aminobutyric acid type A receptor subunit gamma3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr15:2,371,468...2,932,250
Ensembl chr15:24,409,611...24,959,987
G
GDNF
glial cell derived neurotrophic factor
ISO
mRNA:increased expression:brain
RGD
PMID:18501516
RGD:2324932
NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
G
GJA1
gap junction protein alpha 1
treatment
ISO
RGD
PMID:23485053
RGD:8662424
NCBI chr 6:119,213,513...119,227,617
G
GJA5
gap junction protein alpha 5
ISO
protein:increased expression:cerebral artery
RGD
PMID:21895483
RGD:7207391
NCBI chr 1:123,200,111...123,224,626
Ensembl chr 1:112,328,337...112,329,413
G
GPX1
glutathione peroxidase 1
ISO
mRNA:decreased expression:hippocampus, neuron
RGD
PMID:15791111
RGD:2306624
NCBI chr 3:49,280,038...49,281,455
Ensembl chr 3:50,360,947...50,361,826
G
GRM8
glutamate metabotropic receptor 8
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 7:118,430,086...119,249,147
G
GSK3B
glycogen synthase kinase 3 beta
ISO
CTD Direct Evidence: marker/mechanism
CTD RGD
PMID:22643085 PMID:24675465
RGD:10045646
NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771
G
GSN
gelsolin
ISO
RGD
PMID:14588109
RGD:1599864
NCBI chr 9:92,413,819...92,460,483
Ensembl chr 9:120,741,148...120,805,831
G
HCN1
hyperpolarization activated cyclic nucleotide gated potassium channel 1
ISO
mRNA,protein:decreased expression:hippocampus:
RGD
PMID:11726545
RGD:9686434
NCBI chr 5:64,673,392...65,116,259
Ensembl chr 5:69,724,767...70,158,761
G
HMGB1
high mobility group box 1
treatment
ISO
RGD
PMID:22915134
RGD:7245513
NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527
G
HMGCR
3-hydroxy-3-methylglutaryl-CoA reductase
ISO
RGD
PMID:18562561
RGD:5508455
NCBI chr 5:39,936,630...39,961,519
Ensembl chr 5:40,548,919...40,573,785
G
HMOX1
heme oxygenase 1
ISO
RGD
PMID:23470432
RGD:10755702
NCBI chr22:16,388,368...16,401,289
Ensembl chr22:34,230,825...34,244,063
G
HSPA1A
heat shock protein family A (Hsp70) member 1A
ISO
mRNA:increased expression:brain CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:21549006
RGD:5147593
NCBI chr 6:31,476,710...31,491,411
G
HSPA4
heat shock protein family A (Hsp70) member 4
ISO
protein:increased expression:cerebral white matter (rat)
RGD
PMID:22067617
RGD:5688785
NCBI chr 5:128,463,186...128,517,563
Ensembl chr 5:134,619,076...134,673,658
G
HSPB1
heat shock protein family B (small) member 1
ISO
RGD
PMID:11746764
RGD:6480530
NCBI chr 7:67,716,021...67,717,762
Ensembl chr 7:82,751,523...82,752,984
G
HTR7
5-hydroxytryptamine receptor 7
ISO
RGD
PMID:22465320
RGD:6482178
NCBI chr10:87,480,970...87,598,212
Ensembl chr10:91,009,941...91,125,158
G
ICAM1
intercellular adhesion molecule 1
ISO
protein:increased expression:brain:
RGD
PMID:16230799
RGD:11522716
NCBI chr19:9,821,402...9,837,021
Ensembl chr19:10,484,414...10,500,605
G
IFNL3
interferon lambda 3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr19:36,341,396...36,343,261
G
IGF1
insulin like growth factor 1
treatment
ISO
human protein in a rat model
RGD
PMID:9344566
RGD:12904928
NCBI chr12:99,986,887...100,066,773
Ensembl chr12:103,385,911...103,462,177
G
IGF2
insulin like growth factor 2
ISO
mRNA:decreased expression:brain
RGD
PMID:11123717
RGD:5509972
NCBI chr11:2,170,190...2,199,442
Ensembl chr11:2,202,743...2,228,890
G
IL10
interleukin 10
severity treatment
ISO
CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:21549006 PMID:23075771 PMID:23971414
RGD:7364822 RGD:7364983
NCBI chr 1:182,369,234...182,374,207
Ensembl chr 1:186,648,289...186,653,371
G
IL12RB2
interleukin 12 receptor subunit beta 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 1:66,549,650...66,640,623
Ensembl chr 1:68,543,509...68,612,168
G
IL13RA2
interleukin 13 receptor subunit alpha 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr X:104,092,993...104,146,062
Ensembl chr X:114,597,077...114,635,253
G
IL16
interleukin 16
ISO
RGD
PMID:17983426
RGD:5024939
NCBI chr15:60,181,827...60,299,406
Ensembl chr15:79,122,988...79,250,861
G
IL17RD
interleukin 17 receptor D
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 3:57,023,622...57,098,869
Ensembl chr 3:58,240,835...58,309,409
G
IL18
interleukin 18
severity
ISO
mRNA, protein:increased expression:brain
RGD
PMID:17188500
RGD:2315917
NCBI chr11:107,024,376...107,045,194
Ensembl chr11:110,867,586...110,888,371
G
IL18R1
interleukin 18 receptor 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr2A:99,419,686...99,462,650
G
IL1A
interleukin 1 alpha
ISO
CTD Direct Evidence: marker/mechanism mRNA, protein:increased expression:cerebral cortex
CTD RGD
PMID:16024175 PMID:21549006
RGD:2311098
NCBI chr2A:89,273,482...89,284,421
Ensembl chr2A:113,784,854...113,795,801
G
IL1B
interleukin 1 beta
ISO
protein:increased expression:brain, cerebrospinal fluid mRNA, protein:increased expression:cerebral cortex mRNA, protein:increased expression:brain CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:16024175 PMID:17612572 PMID:19800810 PMID:21549006 PMID:22503903
RGD:1626652 RGD:2311098 RGD:6482651
NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
G
IL1R1
interleukin 1 receptor type 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
Ensembl chr2A:103,193,131...103,230,005
G
IL1RN
interleukin 1 receptor antagonist
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:25665855
NCBI chr2A:88,991,646...89,008,013
Ensembl chr2A:114,061,182...114,078,839
G
IL2
interleukin 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 4:114,637,328...114,642,586
Ensembl chr 4:125,782,563...125,787,984
G
IL3
interleukin 3
disease_progression
ISO
protein: increased expression: brain: microdialysis perfusate
RGD
PMID:20717122 PMID:21515263
RGD:5686795 RGD:5686886
NCBI chr 5:127,483,843...127,486,388
Ensembl chr 5:133,647,667...133,650,213
G
IL31RA
interleukin 31 receptor A
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 5:58,101,135...58,167,317
Ensembl chr 5:59,722,621...59,793,518
G
IL4
interleukin 4
ISO
protein:decreased expression:plasma
RGD
PMID:24519543
RGD:10402802
NCBI chr 5:128,091,342...128,099,886
Ensembl chr 5:134,253,039...134,261,581
G
IL5
interleukin 5
treatment
ISO
RGD
PMID:24530657 PMID:24602693
RGD:11522766 RGD:11522770
NCBI chr 5:127,955,377...127,961,726
Ensembl chr 5:134,119,608...134,121,675
G
IL6
interleukin 6
ISO
protein:increased expression:cerebrospinal fluid (rat) CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:10027774 PMID:19800810 PMID:21549006 PMID:23159883
RGD:11049549
NCBI chr 7:23,415,922...23,420,767
G
IL7
interleukin 7
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 8:75,254,166...75,337,373
Ensembl chr 8:76,895,095...76,966,918
G
IL9R
interleukin 9 receptor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
Ensembl chr X:155,373,324...155,386,631
G
IRF1
interferon regulatory factor 1
ISO
mRNA:increased expression:cerebral cortex CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:12503083 PMID:21549006
RGD:2317873
NCBI chr 5:127,903,887...127,913,843
Ensembl chr 5:134,067,441...134,075,035
G
JAK2
Janus kinase 2
ISO
RGD
PMID:21596098
RGD:6483023
NCBI chr 9:4,820,303...4,971,867
Ensembl chr 9:5,006,271...5,156,626
G
JUN
Jun proto-oncogene, AP-1 transcription factor subunit
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr 1:58,042,794...58,045,536
G
KCNJ10
potassium inwardly rectifying channel subfamily J member 10
ISO
RGD
PMID:20861444
RGD:8662901
NCBI chr 1:135,391,321...135,424,100
G
KDR
kinase insert domain receptor
ISO
protein:increased expression:cerebral cortex
RGD
PMID:19733172 PMID:21307798
RGD:5684382 RGD:5684402
NCBI chr 4:68,813,894...68,861,018
Ensembl chr 4:75,377,375...75,427,109
G
LEP
leptin
ISO
RGD
PMID:21276361
RGD:5128517
NCBI chr 7:120,230,896...120,248,602
Ensembl chr 7:132,885,011...132,901,519
G
LOC100974886
uncharacterized LOC100974886
ISO
protein:increased expression:brain, neuron
RGD
PMID:19210118
RGD:2306999
NCBI chr 4:50,092,989...50,095,541
Ensembl chr 4:55,925,562...55,986,555
G
LOC100976904
growth-regulated alpha protein
ISO
mRNA:increased expression:choroid plexus, cerebral cortex
RGD
PMID:19471279
RGD:5135009
NCBI chr 4:50,325,248...50,327,165
Ensembl chr 4:56,153,899...56,159,474
G
LOC100977072
neuronal acetylcholine receptor subunit alpha-7
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr15:10,525,535...10,667,227
Ensembl chr15:29,565,885...29,705,194
G
LOC100986475
metallothionein-2
ISO
mRNA:increased expression:liver (mouse) mRNA:increased expression:dentate gyrus (rat)
RGD
PMID:15650329 PMID:22363575
RGD:6483812 RGD:6483847
NCBI chr16:36,894,853...36,895,826
Ensembl chr16:56,007,922...56,028,093
G
LSG1
large 60S subunit nuclear export GTPase 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:14499481
NCBI chr 3:191,937,249...191,967,849
Ensembl chr 3:202,247,591...202,278,647
G
LY86
lymphocyte antigen 86
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr 6:6,429,846...6,496,664
Ensembl chr 6:6,610,431...6,676,696
G
MAG
myelin associated glycoprotein
susceptibility
ISO
RGD
PMID:17156367
RGD:9685230
NCBI chr19:32,238,457...32,260,497
Ensembl chr19:40,975,763...40,997,401
G
MAP1B
microtubule associated protein 1B
ISO
protein:increased expression, increased phosphorylation:brain
RGD
PMID:10906717
RGD:2304029
NCBI chr 5:43,102,739...43,204,978
Ensembl chr 5:43,701,530...43,803,393
G
MAP1LC3A
microtubule associated protein 1 light chain 3 alpha
ISO
RGD
PMID:24221859
RGD:11558018
NCBI chr20:30,887,345...30,888,986
Ensembl chr20:32,010,284...32,020,411
G
MAP2
microtubule associated protein 2
ISO
protein:decreased expression:cerebral cortex, neuron
RGD
PMID:20568963 PMID:21401443
RGD:6483087 RGD:6483089
NCBI chr2B:96,681,268...96,991,650
Ensembl chr2B:215,314,857...215,391,728
G
MAP3K7
mitogen-activated protein kinase kinase kinase 7
treatment
ISO
associated with Subarachnoid Hemorrhage
RGD
PMID:26100626 PMID:27000704 PMID:33414375
RGD:155791672 RGD:155804286 RGD:155882440
NCBI chr 6:88,398,329...88,470,926
Ensembl chr 6:91,664,263...91,737,468
G
MBL2
mannose binding lectin 2
disease_progression
ISO
RGD
PMID:18183030
RGD:12910935
NCBI chr10:49,401,364...49,409,328
Ensembl chr10:51,527,758...51,543,432
G
MBP
myelin basic protein
ISO
RGD
PMID:18583256
RGD:7349333
NCBI chr18:70,369,882...70,526,693
Ensembl chr18:73,629,522...73,755,351
G
MDM2
MDM2 proto-oncogene
ISO
protein:increased expression:brain cortex (rat)
RGD
PMID:15165363
RGD:2317397
NCBI chr12:66,322,340...66,357,010
Ensembl chr12:69,102,084...69,133,278
G
MIF
macrophage migration inhibitory factor
ISO
RGD
PMID:15922484
RGD:1641989
NCBI chr22:4,646,986...4,647,831
Ensembl chr22:22,730,807...22,732,009
G
MMP9
matrix metallopeptidase 9
treatment
ISO
CTD Direct Evidence: marker/mechanism
CTD RGD
PMID:16671440 PMID:19631748 PMID:24661104
RGD:13207312 RGD:1582656
NCBI chr20:42,346,305...42,354,018
Ensembl chr20:43,432,389...43,440,129
G
MPO
myeloperoxidase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr17:52,333,882...52,357,838
Ensembl chr17:57,201,073...57,212,111
G
MT3
metallothionein 3
treatment
ISO
RGD
PMID:10218634 PMID:10595827 PMID:16314047
RGD:6480628 RGD:9685803 RGD:9685805
NCBI chr16:36,875,919...36,877,558
Ensembl chr16:56,007,922...56,028,093
G
MYOC
myocilin
ISO
mRNA:increased expression:cerebral cortex (rat)
RGD
PMID:12799138
RGD:7401267
NCBI chr 1:147,128,541...147,146,227
Ensembl chr 1:150,841,630...150,858,628
G
NFE2L2
NFE2 like bZIP transcription factor 2
ISO
protein:increased expression:lung:
RGD
PMID:18787991 PMID:25089700
RGD:11576302 RGD:5134971
NCBI chr2B:64,509,446...64,544,600
Ensembl chr2B:182,214,116...182,248,085
G
NGB
neuroglobin
severity
ISO
RGD
PMID:21915648
RGD:9743963
NCBI chr14:57,818,491...57,824,196
Ensembl chr14:77,020,274...77,025,983
G
NGFR
nerve growth factor receptor
treatment
ISO
RGD
PMID:23940017
RGD:10414074
NCBI chr17:8,089,600...8,109,361
Ensembl chr17:8,075,316...8,094,966
G
NOS2
nitric oxide synthase 2
ISO
RGD
PMID:11526986
RGD:10395358
NCBI chr17:28,984,295...29,021,516
Ensembl chr17:29,471,510...29,617,093
G
NOX4
NADPH oxidase 4
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:36762617
NCBI chr11:84,330,362...84,496,755
G
NPPB
natriuretic peptide B
ISO
CTD Direct Evidence: therapeutic associated with lung diseases;protein:increased expression:serum:
CTD RGD
PMID:19803787 PMID:23837838
RGD:7247620
NCBI chr 1:10,621,416...10,622,960
Ensembl chr 1:11,838,518...11,839,995
G
NPY
neuropeptide Y
ISO
protein:increased expression:adrenal medulla
RGD
PMID:23570732
RGD:10448961
NCBI chr 7:24,963,056...24,970,803
Ensembl chr 7:24,568,041...24,574,657
G
NQO1
NAD(P)H quinone dehydrogenase 1
treatment
ISO
mRNA:increased expression:lung associated with Subarachnoid Hemorrhage
RGD
PMID:18787991 PMID:20864352
RGD:11035222 RGD:5134971
NCBI chr16:50,090,696...50,106,495
Ensembl chr16:69,470,288...69,489,731
G
NT5E
5'-nucleotidase ecto
ISO
protein:altered expression:cerebral cortex (rat)
RGD
PMID:21337375
RGD:5134348
NCBI chr 6:83,333,428...83,379,585
Ensembl chr 6:86,615,409...86,661,601
G
P2RY1
purinergic receptor P2Y1
ISO
protein:increased expression:brain, astrocyte
RGD
PMID:19115395
RGD:2315811
NCBI chr 3:149,859,748...149,865,873
Ensembl chr 3:157,426,692...157,427,813
G
PALLD
palladin, cytoskeletal associated protein
ISO
protein:increased expression:brain, astrocyte
RGD
PMID:12932445
RGD:2325786
NCBI chr 4:160,718,475...161,140,436
G
PARP1
poly(ADP-ribose) polymerase 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17640816
NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356
G
PAWR
pro-apoptotic WT1 regulator
ISO
mRNA,protein:increased expression:brain:
RGD
PMID:11421591
RGD:9835358
NCBI chr12:77,114,282...77,224,116
Ensembl chr12:79,969,517...80,070,796
G
PDE4D
phosphodiesterase 4D
ISO
mRNA, protein:alternative form, decreased phosphorylation:brain
RGD
PMID:23057870
RGD:7327147
NCBI chr 5:53,510,287...55,039,181
Ensembl chr 5:55,749,214...56,670,111
G
PDGFA
platelet derived growth factor subunit A
ISO
mRNA:increased expression:cerebral cortex, hippocampus
RGD
PMID:9645955
RGD:11084932
NCBI chr 7:648,722...672,023
G
PDGFB
platelet derived growth factor subunit B
ISO
mRNA:increased expression:cerebral cortex, hippocampus
RGD
PMID:9645955
RGD:11084932
NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
G
PDGFRA
platelet derived growth factor receptor alpha
ISO
mRNA:increased expression:cerebral cortex, hippocampus
RGD
PMID:9645955
RGD:11084932
NCBI chr 4:69,639,081...69,709,870
Ensembl chr 4:76,199,382...76,271,097
G
PDGFRB
platelet derived growth factor receptor beta
ISO
mRNA:increased expression:cerebral cortex, hippocampus
RGD
PMID:9645955
RGD:11084932
NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
G
PECAM1
platelet and endothelial cell adhesion molecule 1
ISO
RGD
PMID:22658532
RGD:6484732
NCBI chr17:58,417,134...58,526,409
Ensembl chr17:63,511,784...63,579,067
G
PGLYRP1
peptidoglycan recognition protein 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr19:43,033,080...43,037,726
Ensembl chr19:51,569,275...51,573,764
G
PGR
progesterone receptor
ISO
RGD
PMID:23211561
RGD:7248711
NCBI chr11:95,997,677...96,098,866
G
PHB1
prohibitin 1
ISO
protein:increased oxidation:cerebral cortex
RGD
PMID:17518533
RGD:2292409
NCBI chr17:8,189,555...8,200,491
Ensembl chr17:8,175,968...8,186,790
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PHB2
prohibitin 2
ISO
RGD
PMID:24566151
RGD:12903261
NCBI chr12:7,097,073...7,102,474
Ensembl chr12:7,013,195...7,018,053
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PIAS1
protein inhibitor of activated STAT 1
ISO
protein:decreased expression:brain, nucleus
RGD
PMID:21545521
RGD:8693413
NCBI chr15:47,006,718...47,141,035
Ensembl chr15:65,276,530...65,410,105
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PPARA
peroxisome proliferator activated receptor alpha
ISO
agonist more effective in combination with simvastatin
RGD
PMID:18562561
RGD:5508455
Ensembl chr22:45,218,364...45,302,970
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PPARGC1A
PPARG coactivator 1 alpha
treatment
ISO
protein:decreased expression:frontal cortex (rat)
RGD
PMID:22642418 PMID:24345766
RGD:10059630 RGD:6484257
NCBI chr 4:18,196,431...18,876,889
Ensembl chr 4:23,483,377...23,581,212
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PPP3CA
protein phosphatase 3 catalytic subunit alpha
ISO
protein: :hippocampus CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:14499481 PMID:19751097
RGD:6483311
NCBI chr 4:93,447,095...93,770,339
Ensembl chr 4:104,113,520...104,435,394
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PRF1
perforin 1
ISO
RGD
PMID:20537642
RGD:6482807
NCBI chr10:67,071,141...67,078,057
Ensembl chr10:69,597,574...69,603,070
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PTGER3
prostaglandin E receptor 3
ISO
protein:increased expression:striatum, microglia (rat)
RGD
PMID:15234107
RGD:9850280
NCBI chr 1:70,076,610...70,271,475
Ensembl chr 1:72,059,441...72,254,063
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PTGS1
prostaglandin-endoperoxide synthase 1
ISO
protein:increased expression:microglia, macrophage protein:increased expression:microglial cells, macrophage, endothelial cell
RGD
PMID:11565600 PMID:12005397 PMID:19719848
RGD:5688162 RGD:5688239 RGD:5688242
NCBI chr 9:93,495,365...93,517,557
Ensembl chr 9:121,837,095...121,859,283
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PTGS2
prostaglandin-endoperoxide synthase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD RGD
PMID:12410334 PMID:19719848 PMID:20810888 PMID:21549006 PMID:21866634
RGD:5508191 RGD:5688162
NCBI chr 1:162,205,534...162,214,130
Ensembl chr 1:166,355,845...166,364,519
G
PTPRZ1
protein tyrosine phosphatase receptor type Z1
ISO
RGD
PMID:12088737
RGD:727637
NCBI chr 7:113,882,557...114,073,283
Ensembl chr 7:126,569,630...126,758,155
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RCHY1
ring finger and CHY zinc finger domain containing 1
ISO
protein:increased expression:cerebral cortex
RGD
PMID:21728064
RGD:10045359
NCBI chr 4:48,691,213...48,725,979
Ensembl chr 4:54,526,202...54,561,048
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RELA
RELA proto-oncogene, NF-kB subunit
ISO
protein:increased expression:ileum
RGD
PMID:18288455
RGD:2298787
NCBI chr11:61,012,839...61,022,225
Ensembl chr11:64,347,859...64,356,868
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RET
ret proto-oncogene
ISO
mRNA:increased expression:brain
RGD
PMID:18501516
RGD:2324932
NCBI chr10:40,050,396...40,103,629
Ensembl chr10:43,249,468...43,284,331
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RHOA
ras homolog family member A
ISO
protein:increased expression:microglial cell, brain
RGD
PMID:17929039
RGD:2298888
NCBI chr 3:49,282,009...49,339,887
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ROBO1
roundabout guidance receptor 1
ISO
mRNA:increased expression:brain protein:increased expression:brain, immune cell
RGD
PMID:16262652 PMID:26550694
RGD:2316136 RGD:243048437
NCBI chr 3:78,707,802...79,876,519
Ensembl chr 3:80,581,388...81,569,308
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ROBO2
roundabout guidance receptor 2
ISO
mRNA:increased expression:brain
RGD
PMID:16262652
RGD:2316136
NCBI chr 3:76,013,780...77,764,156
Ensembl chr 3:79,030,223...79,632,309
G
ROBO3
roundabout guidance receptor 3
ISO
mRNA:increased expression:brain
RGD
PMID:16262652
RGD:2316136
NCBI chr11:119,692,232...119,708,309
Ensembl chr11:123,607,268...123,623,356
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RPS27A
ribosomal protein S27a
ISO
mRNA:decreased expression:cerebral cortex, hippocampus
RGD
PMID:17936732
RGD:11041870
NCBI chr2A:55,389,243...55,392,914
Ensembl chr2A:56,530,349...56,533,527
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S100B
S100 calcium binding protein B
severity
ISO
CTD Direct Evidence: marker/mechanism|therapeutic
CTD RGD
PMID:11520488 PMID:21783483 PMID:21976236
RGD:5508761
NCBI chr21:33,063,845...33,070,073
Ensembl chr21:46,197,750...46,203,953
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SELE
selectin E
ISO
protein:increased expression:brain
RGD
PMID:19107536
RGD:2313599
NCBI chr 1:145,205,684...145,217,143
Ensembl chr 1:148,930,437...148,938,313
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SERPINC1
serpin family C member 1
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:21534203
NCBI chr 1:149,421,737...149,435,301
Ensembl chr 1:153,126,031...153,139,369
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SERPINF1
serpin family F member 1
treatment
ISO
protein:altered expression:cerebellum (rat) human gene in a rat model
RGD
PMID:17709187 PMID:20142768
RGD:8612994 RGD:8622925
NCBI chr17:1,745,597...1,761,399
Ensembl chr17:1,638,556...1,653,568
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SIRT1
sirtuin 1
treatment
ISO
RGD
PMID:17970622
RGD:9497541
NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069
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SKP2
S-phase kinase associated protein 2
ISO
protein:increased expression:brain
RGD
PMID:19852587
RGD:2315049
NCBI chr 5:74,179,608...74,211,563
Ensembl chr 5:79,461,018...79,492,311
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SLC18A3
solute carrier family 18 member A3
ISO
protein:decreased expression:brain
RGD
PMID:18848922
RGD:5686682
NCBI chr10:44,630,006...44,632,419
G
SLIT1
slit guidance ligand 1
ISO
mRNA:increased expression:brain
RGD
PMID:16262652
RGD:2316136
NCBI chr10:93,618,550...93,806,263
Ensembl chr10:97,119,133...97,303,095
G
SLIT2
slit guidance ligand 2
exacerbates
ISO
RGD
PMID:26550694
RGD:243048437
NCBI chr 4:14,654,448...15,023,708
Ensembl chr 4:20,158,952...20,314,656
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SLIT3
slit guidance ligand 3
ISO
mRNA:increased expression:brain
RGD
PMID:16262652
RGD:2316136
NCBI chr 5:164,029,432...164,664,156
Ensembl chr 5:170,793,731...171,425,242
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SNCA
synuclein alpha
ISO
RGD
PMID:14637093 PMID:25089700
RGD:11576302 RGD:6480195
NCBI chr 4:82,018,585...82,132,938
Ensembl chr 4:92,737,608...92,850,600
G
SNCB
synuclein beta
ISO
RGD
PMID:14637093
RGD:6480195
NCBI chr 5:171,918,297...171,928,672
Ensembl chr 5:178,988,439...178,998,800
G
SNCG
synuclein gamma
ISO
RGD
PMID:14637093
RGD:6480195
NCBI chr10:83,383,566...83,391,064
G
SNW1
SNW domain containing 1
ISO
mRNA, protein:increased expression:cerebral cortex (rat)
RGD
PMID:22965216
RGD:11035237
NCBI chr14:58,271,830...58,315,773
Ensembl chr14:77,472,387...77,517,315
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SOD1
superoxide dismutase 1
ISO
RGD
PMID:16248885
RGD:1581214
NCBI chr21:18,029,831...18,037,526
G
SOD2
superoxide dismutase 2
ISO
CTD Direct Evidence: therapeutic
CTD RGD
PMID:16248885 PMID:24462953
RGD:1581214
NCBI chr 6:157,562,814...157,610,155
Ensembl chr 6:162,576,082...162,589,960
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SPARC
secreted protein acidic and cysteine rich
ISO
mRNA:increased expression:brain, blood vessel
RGD
PMID:9704602
RGD:2300066
NCBI chr 5:147,087,903...147,112,466
Ensembl chr 5:153,090,181...153,115,750
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SSTR2
somatostatin receptor 2
ISO
RGD
PMID:11879809
RGD:2325002
NCBI chr17:67,093,013...67,099,086
Ensembl chr17:72,553,506...72,554,615
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SSTR3
somatostatin receptor 3
ISO
RGD
PMID:11879809
RGD:2325002
NCBI chr22:18,116,993...18,125,170
Ensembl chr22:35,954,232...35,955,488
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SSTR4
somatostatin receptor 4
ISO
RGD
PMID:11879809
RGD:2325002
NCBI chr20:22,982,009...22,986,058
Ensembl chr20:23,333,320...23,334,766
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STAT1
signal transducer and activator of transcription 1
ISO
RGD
PMID:21596098
RGD:6483023
NCBI chr2B:78,270,642...78,316,074
Ensembl chr2B:196,186,906...196,232,280
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STAT3
signal transducer and activator of transcription 3
ISO
protein:increased phosphorylation:brain
RGD
PMID:21596098 PMID:22145815 PMID:22827467
RGD:6483023 RGD:6892706 RGD:8694312
NCBI chr17:14,928,689...15,003,644
Ensembl chr17:15,152,358...15,227,067
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STRN
striatin
ISO
RGD
PMID:16351572
RGD:2311293
NCBI chr2A:36,870,487...36,993,103
Ensembl chr2A:37,637,543...37,713,550
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TARDBP
TAR DNA binding protein
ISO
RGD
PMID:22101322
RGD:5687195
NCBI chr 1:9,775,084...9,786,710
Ensembl chr 1:10,996,006...11,008,732
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TF
transferrin
ISO
RGD
PMID:22538758
RGD:7244386
NCBI chr 3:130,799,063...130,830,227
Ensembl chr 3:138,274,159...138,305,476
G
TH
tyrosine hydroxylase
ISO
protein:decreased activity:striatum (rat)
RGD
PMID:21047500
RGD:5128822
NCBI chr11:2,204,820...2,212,750
Ensembl chr11:2,231,248...2,242,433
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THBD
thrombomodulin
onset
ISO
RGD
PMID:17895610
RGD:5685007
NCBI chr20:22,992,341...22,996,415
Ensembl chr20:23,345,917...23,347,812
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TICAM2
TIR domain containing adaptor molecule 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr 5:110,935,649...110,960,019
Ensembl chr 5:116,734,092...116,734,799
G
TIMP1
TIMP metallopeptidase inhibitor 1
ISO
mRNA:increased expression:brain, astrocytes
RGD
PMID:10719361
RGD:2290468
NCBI chr X:40,018,190...40,022,636
Ensembl chr X:47,914,906...47,919,419
G
TIMP2
TIMP metallopeptidase inhibitor 2
ISO
mRNA:increased expression:brain, neuron, microglial cell
RGD
PMID:10719361
RGD:2290468
NCBI chr17:72,928,692...73,001,892
Ensembl chr17:78,476,807...78,495,649
G
TJP1
tight junction protein 1
ISO
RGD
PMID:19889224
RGD:2325128
NCBI chr15:981,198...1,249,292
Ensembl chr15:26,344,878...26,598,878
G
TLR1
toll like receptor 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21549006
NCBI chr 4:33,119,485...33,133,541
Ensembl chr 4:38,979,006...38,981,366
G
TLR2
toll like receptor 2
ISO
CTD Direct Evidence: marker/mechanism mRNA:increased expression:brain
CTD RGD
PMID:18316784 PMID:21549006
RGD:2312713
NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331
G
TLR4
toll like receptor 4
ISO
CTD Direct Evidence: marker/mechanism mRNA:increased expression:brain
CTD RGD
PMID:18316784 PMID:21549006
RGD:2312713
NCBI chr 9:88,827,495...88,840,458
Ensembl chr 9:117,180,550...117,190,711
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TNF
tumor necrosis factor
ISO
CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:10674461 PMID:19800810 PMID:21549006
RGD:13825262
NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
G
TNFRSF13B
TNF receptor superfamily member 13B
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr17:34,321,121...34,355,020
Ensembl chr17:39,252,858...39,292,053
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TNFRSF13C
TNF receptor superfamily member 13C
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr22:22,816,504...22,819,584
G
TNFRSF14
TNF receptor superfamily member 14
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 1:1,288,493...1,296,532
Ensembl chr 1:2,427,631...2,435,615
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TNFRSF1A
TNF receptor superfamily member 1A
ISO
protein:increased expression:brain CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:17074049 PMID:21549006
RGD:1624183
NCBI chr12:6,457,617...6,470,969
Ensembl chr12:6,374,257...6,387,613
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TNFSF10
TNF superfamily member 10
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr 3:169,512,491...169,530,706
Ensembl chr 3:177,694,021...177,712,137
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TNFSF12
TNF superfamily member 12
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr17:7,581,163...7,589,809
Ensembl chr17:7,567,766...7,575,575
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TRAF4
TNF receptor associated factor 4
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:23159883
NCBI chr17:28,025,288...28,031,379
Ensembl chr17:28,531,867...28,536,994
G
TRPM2
transient receptor potential cation channel subfamily M member 2
ISO
mRNA, protein:increased expression:cerebral cortex, hippocampus
RGD
PMID:20309649
RGD:9999437
NCBI chr21:30,606,825...30,737,313
Ensembl chr21:43,903,811...44,035,298
G
UBA52
ubiquitin A-52 residue ribosomal protein fusion product 1
ISO
mRNA:decreased expression:cerebral cortex, hippocampus (rat)
RGD
PMID:17936732
RGD:11041870
NCBI chr19:18,040,946...18,052,445
G
UCP2
uncoupling protein 2
ISO
CTD Direct Evidence: therapeutic
CTD RGD
PMID:12858170
RGD:7204436
NCBI chr11:69,047,397...69,056,056
Ensembl chr11:72,354,529...72,363,185
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VEGFA
vascular endothelial growth factor A
ISO
CTD Direct Evidence: therapeutic
CTD RGD
PMID:12230324 PMID:18065154
RGD:1580574
NCBI chr 6:43,361,053...43,377,366
Ensembl chr 6:44,650,365...44,666,353
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VEGFB
vascular endothelial growth factor B
ISO
mRNA, protein:increased expression:brain
RGD
PMID:12230324
RGD:1580574
NCBI chr11:59,591,750...59,595,926
G
VIM
vimentin
ISO
protein:increased expression:brain
RGD
PMID:15527750 PMID:19728994
RGD:6480519 RGD:6480527
NCBI chr10:17,546,389...17,554,702
Ensembl chr10:17,818,285...17,826,642
G
XDH
xanthine dehydrogenase
treatment
ISO
RGD
PMID:26528358
RGD:13208950
NCBI chr2A:31,356,011...31,435,111
Ensembl chr2A:31,425,183...31,504,455
G
APOE
apolipoprotein E
susceptibility
ISO
DNA:polymorphism:exon:
RGD
PMID:9214529
RGD:7495763
NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
G
TARDBP
TAR DNA binding protein
ISO
protein:increased expression:brain
RGD
PMID:20720505
RGD:5687179
NCBI chr 1:9,775,084...9,786,710
Ensembl chr 1:10,996,006...11,008,732
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BECN1
beclin 1
ISO
protein:increased expression:neuron
RGD
PMID:16004578
RGD:6483315
NCBI chr17:14,493,619...14,507,809
Ensembl chr17:14,719,781...14,733,286
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GFAP
glial fibrillary acidic protein
ISO
RGD
PMID:8833197
RGD:6480531
NCBI chr17:12,407,211...12,417,072
Ensembl chr17:12,579,754...12,591,961
G
GOT1
glutamic-oxaloacetic transaminase 1
ISO
human protein in a rat model
RGD
PMID:17014847
RGD:13504858
NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178
G
IGF1
insulin like growth factor 1
ISO
protein:decreased expression:serum:
RGD
PMID:12002507
RGD:8548865
NCBI chr12:99,986,887...100,066,773
Ensembl chr12:103,385,911...103,462,177
G
IGFBP3
insulin like growth factor binding protein 3
ISO
protein:decreased expression:serum:
RGD
PMID:12002507
RGD:8548865
NCBI chr 7:46,564,234...46,573,145
G
VIM
vimentin
ISO
RGD
PMID:8833197
RGD:6480531
NCBI chr10:17,546,389...17,554,702
Ensembl chr10:17,818,285...17,826,642
G
ALDH3A1
aldehyde dehydrogenase 3 family member A1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:28038895
NCBI chr17:31,384,740...31,395,719
Ensembl chr17:36,531,720...36,542,504
G
TP63
tumor protein p63
ISO
RGD
PMID:12167247
RGD:11568649
NCBI chr 3:186,651,879...186,918,300
Ensembl chr 3:195,199,167...195,474,104
G
IFNG
interferon gamma
ISO
mRNA,protein:increased expression:corneal
RGD
PMID:15832292
RGD:8157597
NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829
G
BMP4
bone morphogenetic protein 4
ISO
mRNA:increased expression:superior cervical ganglion
RGD
PMID:16420416
RGD:2289006
NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
G
CX3CL1
C-X3-C motif chemokine ligand 1
ISO
RGD
PMID:15153618
RGD:4891994
NCBI chr16:37,646,447...37,659,078
Ensembl chr16:56,779,065...56,791,760
G
S100B
S100 calcium binding protein B
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:30076900
NCBI chr21:33,063,845...33,070,073
Ensembl chr21:46,197,750...46,203,953
G
IL10
interleukin 10
treatment
ISO
RGD
PMID:22553604
RGD:7364851
NCBI chr 1:182,369,234...182,374,207
Ensembl chr 1:186,648,289...186,653,371
G
IL1B
interleukin 1 beta
ISO
protein:increased expression:retina
RGD
PMID:9618720
RGD:7794723
NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
G
PPARG
peroxisome proliferator activated receptor gamma
ISO
protein:increased expression:cornea, neutrophil, macrophage (rat)
RGD
PMID:24194635
RGD:8552904
NCBI chr 3:12,215,322...12,361,669
Ensembl chr 3:12,622,397...12,705,060
G
FGF2
fibroblast growth factor 2
ISO
protein:increased expression:lens
RGD
PMID:15273655
RGD:8655664
NCBI chr 4:115,005,136...115,076,369
Ensembl chr 4:126,149,813...126,214,942
G
PPARG
peroxisome proliferator activated receptor gamma
treatment
ISO
RGD
PMID:18658087
RGD:8552893
NCBI chr 3:12,215,322...12,361,669
Ensembl chr 3:12,622,397...12,705,060
G
ADCYAP1
adenylate cyclase activating polypeptide 1
ISO
mRNA:increased expression:facial VII nucleus
RGD
PMID:19427307
RGD:2325258
NCBI chr18:13,414,618...13,421,668
Ensembl chr18:15,713,479...15,717,749
G
ATF2
activating transcription factor 2
ISO
RGD
PMID:9813301
RGD:10047413
NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007
G
CCR3
C-C motif chemokine receptor 3
ISO
RGD
PMID:19922414
RGD:6892922
NCBI chr 3:46,147,928...46,172,947
Ensembl chr 3:47,253,878...47,278,630
G
CD59
CD59 molecule (CD59 blood group)
ISO
mRNA, protein:increased expression:facial VII nucleus
RGD
PMID:9846834
RGD:1600495
NCBI chr11:33,680,580...33,708,479
Ensembl chr11:33,552,164...33,590,157
G
CLU
clusterin
ISO
protein:increased expression:neuron,astrocyte
RGD
PMID:10800205
RGD:408418725
NCBI chr 8:26,867,973...26,884,838
Ensembl chr 8:24,070,053...24,083,523
G
CSF1
colony stimulating factor 1
ISO
protein:increased expression:facial VII nerve, microglial cell
RGD
PMID:20831658
RGD:5131509
NCBI chr 1:112,555,755...112,575,894
Ensembl chr 1:127,764,916...127,781,943
G
CTSS
cathepsin S
ISO
RGD
PMID:17539023
RGD:5686912
NCBI chr 1:126,084,249...126,118,221
Ensembl chr 1:129,733,996...129,768,318
G
GFRA1
GDNF family receptor alpha 1
ISO
mRNA:increased expression:facial VII nucleus
RGD
PMID:9582449
RGD:6218984
NCBI chr10:112,645,574...112,862,413
Ensembl chr10:116,079,063...116,295,164
G
HGF
hepatocyte growth factor
treatment
ISO
RGD
PMID:21562589
RGD:8548634
NCBI chr 7:73,667,618...73,738,960
Ensembl chr 7:87,327,798...87,397,811
G
MT3
metallothionein 3
treatment
ISO
RGD
PMID:14625437
RGD:9685806
NCBI chr16:36,875,919...36,877,558
Ensembl chr16:56,007,922...56,028,093
G
NDUFA5
NADH:ubiquinone oxidoreductase subunit A5
ISO
mRNA:increased expression:skeletal muscle
RGD
PMID:8875451
RGD:2302319
NCBI chr 7:115,547,062...115,563,948
Ensembl chr 7:128,230,035...128,246,800
G
RET
ret proto-oncogene
ISO
mRNA:increased expression:facial VII nucleus
RGD
PMID:9582449
RGD:6218984
NCBI chr10:40,050,396...40,103,629
Ensembl chr10:43,249,468...43,284,331
G
ACVR1B
activin A receptor type 1B
ISO
RGD
PMID:9013782
RGD:151665480
NCBI chr12:36,765,655...36,811,355
Ensembl chr12:37,541,867...37,566,660
G
ADAMTS1
ADAM metallopeptidase with thrombospondin type 1 motif 1
ISO
mRNA:increased expression:hypoglossal nerve
RGD
PMID:11311987
RGD:5037239
NCBI chr21:13,270,668...13,279,217
Ensembl chr21:26,656,370...26,665,485
G
AIF1
allograft inflammatory factor 1
ISO
RGD
PMID:9698327
RGD:704401
NCBI chr 6:31,276,215...31,278,051
Ensembl chr 6:32,166,301...32,168,125
G
CSNK2B
casein kinase 2 beta
ISO
RGD
PMID:11068334
RGD:11565824
NCBI chr 6:31,327,250...31,331,250
G
FGF2
fibroblast growth factor 2
ISO
RGD
PMID:9183688
RGD:8655640
NCBI chr 4:115,005,136...115,076,369
Ensembl chr 4:126,149,813...126,214,942
G
FGFR1
fibroblast growth factor receptor 1
ISO
RGD
PMID:9183688
RGD:8655640
NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904
G
GFRA1
GDNF family receptor alpha 1
ISO
mRNA:increased expression:hypoglossal XII nerve
RGD
PMID:10407179
RGD:6218979
NCBI chr10:112,645,574...112,862,413
Ensembl chr10:116,079,063...116,295,164
G
IL1R1
interleukin 1 receptor type 1
ISO
mRNA:increased expression:hypoglossal nerve
RGD
PMID:11311987
RGD:5037239
Ensembl chr2A:103,193,131...103,230,005
G
MCAM
melanoma cell adhesion molecule
ISO
RGD
PMID:10076889
RGD:7364787
NCBI chr11:114,149,583...114,158,234
Ensembl chr11:118,078,179...118,083,893
G
MME
membrane metalloendopeptidase
ISO
RGD
PMID:8201016
RGD:13801045
NCBI chr 3:152,085,694...152,240,148
Ensembl chr 3:160,197,566...160,292,119
G
PRKACA
protein kinase cAMP-activated catalytic subunit alpha
ISO
RGD
PMID:7769990
RGD:7327191
NCBI chr19:13,657,344...13,683,864
Ensembl chr19:14,385,191...14,406,205
G
PRKACB
protein kinase cAMP-activated catalytic subunit beta
ISO
RGD
PMID:7769990
RGD:7327191
NCBI chr 1:116,625,640...116,786,396
Ensembl chr 1:85,487,681...85,644,253
G
RET
ret proto-oncogene
ISO
mRNA:increased expression:hypoglossal XII nerve
RGD
PMID:10407179
RGD:6218979
NCBI chr10:40,050,396...40,103,629
Ensembl chr10:43,249,468...43,284,331
G
SMAD1
SMAD family member 1
ISO
mRNA:increased expression:hypoglossal nucleus
RGD
PMID:17166487
RGD:1643227
NCBI chr 4:137,822,269...137,899,700
Ensembl chr 4:149,481,836...149,558,135
G
SMAD2
SMAD family member 2
ISO
mRNA:increased expression:hypoglossal nucleus
RGD
PMID:17166487
RGD:1643227
NCBI chr18:41,213,001...41,309,902
Ensembl chr18:44,580,905...44,668,530
G
SMAD3
SMAD family member 3
ISO
mRNA:increased expression:hypoglossal nucleus
RGD
PMID:17166487
RGD:1643227
NCBI chr15:46,013,764...46,143,126
Ensembl chr15:64,284,949...64,414,185
G
SMAD4
SMAD family member 4
ISO
mRNA:increased expression:hypoglossal nucleus
RGD
PMID:17166487
RGD:1643227
NCBI chr18:44,402,112...44,456,779
Ensembl chr18:47,764,568...47,797,359
G
SMAD7
SMAD family member 7
ISO
mRNA:increased expression:hypoglossal nucleus
RGD
PMID:17166487
RGD:1643227
NCBI chr18:42,306,324...42,337,214
G
SMAD9
SMAD family member 9
ISO
mRNA:decreased expression:hypoglossal nucleus
RGD
PMID:17166487
RGD:1643227
NCBI chr13:18,055,427...18,130,571
Ensembl chr13:36,486,597...36,521,646
G
TXNRD1
thioredoxin reductase 1
ISO
mRNA, protein:increased expression:neuron
RGD
PMID:19833109
RGD:5133729
NCBI chr12:101,862,703...101,925,104
Ensembl chr12:105,187,128...105,321,112
G
GP6
glycoprotein VI platelet
exacerbates
ISO
RGD
PMID:21258336
RGD:401824683
NCBI chr19:52,051,138...52,071,673
Ensembl chr19:60,746,578...60,770,643
G
MDM2
MDM2 proto-oncogene
treatment
ISO
RGD
PMID:34334113
RGD:155882538
NCBI chr12:66,322,340...66,357,010
Ensembl chr12:69,102,084...69,133,278
G
ZEB2
zinc finger E-box binding homeobox 2
treatment
ISO
protein:increased expression:brain (rat)
RGD
PMID:34334113
RGD:155882538
NCBI chr2B:15,325,094...15,460,908
Ensembl chr2B:148,460,904...148,596,500
G
CITED2
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2
ISO
mRNA:decreased expression:bone
RGD
PMID:19607804
RGD:5147852
NCBI chr 6:137,134,142...137,136,550
G
IHH
Indian hedgehog signaling molecule
ISO
RGD
PMID:23992905
RGD:12911207
NCBI chr2B:106,312,472...106,319,124
Ensembl chr2B:224,906,271...224,911,506
G
NTRK2
neurotrophic receptor tyrosine kinase 2
ISO
mRNA:increased expression:motor neuron
RGD
PMID:21456016
RGD:5684341
NCBI chr 9:39,663,986...40,208,770
Ensembl chr 9:84,021,837...84,372,678
G
ADCY10
adenylate cyclase 10
ISO
protein:decreased expression:retina
RGD
PMID:22649251
RGD:329347828
NCBI chr 1:143,239,576...143,404,038
Ensembl chr 1:147,023,671...147,129,705
G
ADNP
activity dependent neuroprotector homeobox
ISO
RGD
PMID:18414890
RGD:2312783
NCBI chr20:47,233,696...47,276,075
Ensembl chr20:48,361,043...48,400,387
G
AMIGO3
adhesion molecule with Ig like domain 3
treatment
ISO
RGD
PMID:23613963
RGD:14390159
NCBI chr 3:49,648,967...49,652,285
Ensembl chr 3:50,885,925...50,887,439
G
AQP4
aquaporin 4
ISO
RGD
PMID:20216911
RGD:2326035
NCBI chr18:20,108,607...20,122,381
Ensembl chr18:23,713,146...23,726,919
G
AQP9
aquaporin 9
ISO
RGD
PMID:20216911
RGD:2326035
NCBI chr15:37,107,061...37,154,887
Ensembl chr15:55,418,767...55,466,541
G
ARG2
arginase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:30618589
NCBI chr14:48,197,831...48,231,829
Ensembl chr14:67,075,941...67,109,962
G
ATF2
activating transcription factor 2
ISO
RGD
PMID:10366744
RGD:10047417
NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007
G
BAX
BCL2 associated X, apoptosis regulator
ISO
mRNA:increased expression:optic nerve, retina
RGD
PMID:24357921
RGD:10054098
NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468
G
BCL2
BCL2 apoptosis regulator
ISO
mRNA:decreased expression:optic nerve, retina
RGD
PMID:24357921
RGD:10054098
NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100
G
BDNF
brain derived neurotrophic factor
treatment
ISO
RGD
PMID:9520478 PMID:11050383 PMID:15140649
RGD:8655584 RGD:8655586 RGD:8655637
NCBI chr11:27,618,322...27,687,661
Ensembl chr11:27,520,312...27,589,239
G
C3
complement C3
ISO
mRNA:increased expression:optic nerve
RGD
PMID:14577867
RGD:5129542
NCBI chr19:5,708,211...5,753,178
Ensembl chr19:6,629,287...6,674,699
G
CDK2
cyclin dependent kinase 2
ISO
mRNA:increased expression:retina
RGD
PMID:16723461
RGD:2293567
NCBI chr12:32,940,225...32,946,236
Ensembl chr12:33,189,934...33,195,945
G
CFL1
cofilin 1
treatment
ISO
RGD
PMID:27443501
RGD:11568693
NCBI chr11:61,215,092...61,218,628
Ensembl chr11:64,544,275...64,550,806
G
CLU
clusterin
ISO
RGD
PMID:14577867
RGD:5129542
NCBI chr 8:26,867,973...26,884,838
Ensembl chr 8:24,070,053...24,083,523
G
CSF1R
colony stimulating factor 1 receptor
ISO
mRNA:increased expression:retina (rat)
RGD
PMID:20187850
RGD:151665810
NCBI chr 5:145,478,725...145,537,858
Ensembl chr 5:151,483,572...151,517,415
G
CSF3
colony stimulating factor 3
treatment
ISO
RGD
PMID:20144610
RGD:11039471
NCBI chr17:17,271,074...17,273,493
Ensembl chr17:17,491,276...17,493,729
G
CTSB
cathepsin B
ISO
protein:increased expression:retina (rat)
RGD
PMID:18775855
RGD:2315508
NCBI chr 8:7,333,498...7,359,264
G
EDN1
endothelin 1
ISO
protein:increased expression:retina
RGD
PMID:18600494
RGD:4892579
NCBI chr 6:12,076,312...12,142,861
Ensembl chr 6:12,462,718...12,503,545
G
EDNRA
endothelin receptor type A
ISO
mRNA:increased expression:retina
RGD
PMID:18600494
RGD:4892579
NCBI chr 4:139,815,336...139,879,600
Ensembl chr 4:151,476,356...151,536,497
G
EDNRB
endothelin receptor type B
ISO
mRNA:increased expression:retina
RGD
PMID:18600494
RGD:4892579
NCBI chr13:59,112,349...59,136,615
Ensembl chr13:78,153,020...78,177,286
G
EP300
E1A binding protein p300
ISO
protein:decreased expression:retinal ganglion cell layer (rat) human gene in rat model
RGD
PMID:21705428
RGD:7349392
NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604
G
FGF2
fibroblast growth factor 2
treatment
ISO
RGD
PMID:14664816
RGD:8554854
NCBI chr 4:115,005,136...115,076,369
Ensembl chr 4:126,149,813...126,214,942
G
FTO
FTO alpha-ketoglutarate dependent dioxygenase
ISO
mRNA:increased expression:retina
RGD
PMID:33664770
RGD:329951020
NCBI chr16:33,939,300...34,343,419
Ensembl chr16:53,023,425...53,490,231
G
GDNF
glial cell derived neurotrophic factor
ISO
RGD
PMID:15144875
RGD:6218970
NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
G
GFRA1
GDNF family receptor alpha 1
ISO
RGD
PMID:15144875
RGD:6218970
NCBI chr10:112,645,574...112,862,413
Ensembl chr10:116,079,063...116,295,164
G
GFRA2
GDNF family receptor alpha 2
ISO
RGD
PMID:15144875
RGD:6218970
NCBI chr 8:20,935,512...21,033,571
Ensembl chr 8:17,878,102...17,974,457
G
HGF
hepatocyte growth factor
treatment
ISO
RGD
PMID:21443522
RGD:8548549
NCBI chr 7:73,667,618...73,738,960
Ensembl chr 7:87,327,798...87,397,811
G
IGF1R
insulin like growth factor 1 receptor
ISO
protein: altered activity: eye protein:increased expression:retina:
RGD
PMID:19484445 PMID:23648097
RGD:10046025 RGD:5686431
NCBI chr15:77,332,926...77,648,474
Ensembl chr15:96,535,164...96,832,974
G
JUN
Jun proto-oncogene, AP-1 transcription factor subunit
ISO
RGD
PMID:10366744
RGD:10047417
NCBI chr 1:58,042,794...58,045,536
G
KCNJ10
potassium inwardly rectifying channel subfamily J member 10
ISO
RGD
PMID:20216911
RGD:2326035
NCBI chr 1:135,391,321...135,424,100
G
MYRF
myelin regulatory factor
ISO
mRNA:decreased expression: oligodendrocyte
RGD
PMID:29915135
RGD:213230153
NCBI chr11:57,052,219...57,088,105
Ensembl chr11:60,412,780...60,448,579
G
NAMPT
nicotinamide phosphoribosyltransferase
treatment
ISO
RGD
PMID:28032230
RGD:13781885
NCBI chr 7:98,227,071...98,262,254
Ensembl chr 7:110,952,876...110,981,967
G
NCAM1
neural cell adhesion molecule 1
ISO
RGD
PMID:18757519
RGD:2326023
NCBI chr11:107,845,507...108,160,441
Ensembl chr11:111,925,677...112,000,401
G
NEFM
neurofilament medium chain
ISO
RGD
PMID:8501527
RGD:9743936
NCBI chr 8:24,181,335...24,186,701
Ensembl chr 8:21,098,005...21,107,468
G
NEO1
neogenin 1
ISO
protein:increased expression:retina
RGD
PMID:21887516
RGD:9850142
NCBI chr15:51,968,238...52,221,116
Ensembl chr15:70,789,035...70,977,178
G
NGF
nerve growth factor
ISO
protein:increased expression:retina
RGD
PMID:28067793
RGD:402463954
NCBI chr 1:87,223,597...87,276,759
G
NGFR
nerve growth factor receptor
ISO
RGD
PMID:20943663
RGD:5508695
NCBI chr17:8,089,600...8,109,361
Ensembl chr17:8,075,316...8,094,966
G
NTRK1
neurotrophic receptor tyrosine kinase 1
ISO
RGD
PMID:20943663
RGD:5508695
Ensembl chr 1:136,007,476...136,047,355
G
NTRK2
neurotrophic receptor tyrosine kinase 2
treatment
ISO
RGD
PMID:20357199 PMID:34245756
RGD:5684908 RGD:597015764
NCBI chr 9:39,663,986...40,208,770
Ensembl chr 9:84,021,837...84,372,678
G
PAWR
pro-apoptotic WT1 regulator
ISO
mRNA:increased expression:retina:
RGD
PMID:12836167
RGD:1299297
NCBI chr12:77,114,282...77,224,116
Ensembl chr12:79,969,517...80,070,796
G
PAX6
paired box 6
ISO
protein:increased expression:retina (rat)
RGD
PMID:23297010
RGD:8552379
NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474
G
PDGFB
platelet derived growth factor subunit B
ISO
protein:decreased expression:nerve fiber:
RGD
PMID:9893812
RGD:10449496
NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
G
PECAM1
platelet and endothelial cell adhesion molecule 1
ISO
protein:increased expression:optic nerve (rat)
RGD
PMID:22336118
RGD:6767293
NCBI chr17:58,417,134...58,526,409
Ensembl chr17:63,511,784...63,579,067
G
PLAU
plasminogen activator, urokinase
ISO
mRNA:increased expression:optic nerve (rat)
RGD
PMID:20798533
RGD:6483802
NCBI chr10:70,433,340...70,441,569
Ensembl chr10:73,105,895...73,113,136
G
PTPN5
protein tyrosine phosphatase non-receptor type 5
ISO
protein:increased expression:retina (rat)
RGD
PMID:15555919
RGD:9835027
NCBI chr11:18,758,285...18,822,845
Ensembl chr11:18,673,366...18,711,885
G
RHOA
ras homolog family member A
ISO
protein:increased expression, altered localization:retina
RGD
PMID:17534117
RGD:1642826
NCBI chr 3:49,282,009...49,339,887
G
SNW1
SNW domain containing 1
ISO
protein:increased expression:retina (rat)
RGD
PMID:25074585
RGD:11035254
NCBI chr14:58,271,830...58,315,773
Ensembl chr14:77,472,387...77,517,315
G
TLR2
toll like receptor 2
treatment
ISO
RGD
PMID:19661221
RGD:597538516
NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331
G
TLR4
toll like receptor 4
ISO
protein:increased expression:optic nerve
RGD
PMID:23103505
RGD:7794777
NCBI chr 9:88,827,495...88,840,458
Ensembl chr 9:117,180,550...117,190,711
G
TNFRSF1A
TNF receptor superfamily member 1A
ISO
RGD
PMID:14697498 PMID:18552980
RGD:7794683 RGD:8661743
NCBI chr12:6,457,617...6,470,969
Ensembl chr12:6,374,257...6,387,613
G
TRADD
TNFRSF1A associated via death domain
ISO
protein:increased expression: retina
RGD
PMID:18552980
RGD:7794683
NCBI chr16:47,499,881...47,506,220
Ensembl chr16:66,889,006...66,891,016
G
YBX3
Y-box binding protein 3
ISO
mRNA:increased expression:retinal ganglion cell
RGD
PMID:11750989
RGD:2311250
NCBI chr12:10,728,049...10,752,267
Ensembl chr12:10,996,380...11,018,172
G
FGF2
fibroblast growth factor 2
ISO
mRNA:increased expression:retina
RGD
PMID:9268592
RGD:8655567
NCBI chr 4:115,005,136...115,076,369
Ensembl chr 4:126,149,813...126,214,942
G
NEO1
neogenin 1
ISO
protein:increased expression:retina
RGD
PMID:21887516
RGD:9850142
NCBI chr15:51,968,238...52,221,116
Ensembl chr15:70,789,035...70,977,178
G
RGMA
repulsive guidance molecule BMP co-receptor a
ISO
protein:increased expression:retina
RGD
PMID:21887516
RGD:9850142
NCBI chr15:71,728,669...71,774,447
Ensembl chr15:90,922,199...90,956,179
G
ENTPD1
ectonucleoside triphosphate diphosphohydrolase 1
ISO
protein:increased expression,increased activity:cerebral cortex:
RGD
PMID:16672190
RGD:9685448
NCBI chr10:92,365,267...92,511,852
Ensembl chr10:95,828,094...95,983,257
G
FGFR1
fibroblast growth factor receptor 1
ISO
mRNA,protein:increased expression:astrocyte,macrophage,neutrophil:
RGD
PMID:11168551
RGD:10402049
NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904
G
GFAP
glial fibrillary acidic protein
ISO
RGD
PMID:10225952
RGD:6480471
NCBI chr17:12,407,211...12,417,072
Ensembl chr17:12,579,754...12,591,961
G
PDGFB
platelet derived growth factor subunit B
ISO
protein:increased expression:neuron:
RGD
PMID:7526956
RGD:10449485
NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
G
VIM
vimentin
ISO
RGD
PMID:10225952
RGD:6480471
NCBI chr10:17,546,389...17,554,702
Ensembl chr10:17,818,285...17,826,642
G
TRH
thyrotropin releasing hormone
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:8690305
NCBI chr 3:127,037,069...127,041,299
Ensembl chr 3:134,383,016...134,387,736
G
BMP4
bone morphogenetic protein 4
treatment
ISO
RGD
PMID:16332232
RGD:8699514
NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
G
IGF1
insulin like growth factor 1
ISO
protein:decreased expression:serum:
RGD
PMID:12002507
RGD:8548865
NCBI chr12:99,986,887...100,066,773
Ensembl chr12:103,385,911...103,462,177
G
PLAT
plasminogen activator, tissue type
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:1899364
NCBI chr 8:41,419,415...41,451,951
Ensembl chr 8:38,864,918...38,897,779
G
ADAM10
ADAM metallopeptidase domain 10
ISO
RGD
PMID:22489706
RGD:13703033
NCBI chr15:37,562,930...37,717,175
Ensembl chr15:55,873,606...56,027,188
G
AHR
aryl hydrocarbon receptor
ISO
protein:increased expression:T cell, neuron, brain cortex, hippocampus
RGD
PMID:27506546
RGD:405878081
NCBI chr 7:17,949,254...17,998,737
Ensembl chr 7:17,278,637...17,326,171
G
APP
amyloid beta precursor protein
treatment
ISO
RGD
PMID:29320530
RGD:13782048
NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072
G
BAD
BCL2 associated agonist of cell death
treatment
ISO
RGD
PMID:24582457
RGD:13782254
NCBI chr11:59,626,981...59,641,824
Ensembl chr11:62,971,808...62,986,257
G
BDNF
brain derived neurotrophic factor
ISO
mRNA:increased expression:CA3 field of hippocampus, dentate gyrus
RGD
PMID:10925157
RGD:596936229
NCBI chr11:27,618,322...27,687,661
Ensembl chr11:27,520,312...27,589,239
G
BID
BH3 interacting domain death agonist
severity disease_progression
ISO
RGD
PMID:12172380 PMID:15307896
RGD:5509821 RGD:632018
NCBI chr22:1,164,787...1,205,051
Ensembl chr22:16,594,186...16,632,844
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CAPN1
calpain 1
severity
ISO
protein:increased expression:cytosol, plasma membrane
RGD
PMID:9469158 PMID:15307896
RGD:13792664 RGD:5509821
NCBI chr11:60,545,837...60,576,631
Ensembl chr11:63,886,015...63,916,021
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CAPN2
calpain 2
severity
ISO
RGD
PMID:9469158 PMID:15307896
RGD:13792664 RGD:5509821
NCBI chr 1:199,335,582...199,399,267
Ensembl chr 1:204,335,573...204,409,150
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CASP3
caspase 3
severity
ISO
protein:increased expression:cerebral cortex
RGD
PMID:15307896 PMID:27614125
RGD:329961568 RGD:5509821
NCBI chr 4:176,793,190...176,815,023
Ensembl chr 4:189,018,422...189,040,185
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CASP8
caspase 8
disease_progression severity
ISO
RGD
PMID:12172380 PMID:15307896
RGD:5509821 RGD:632018
NCBI chr2B:88,490,611...88,542,132
Ensembl chr2B:206,669,544...206,696,468
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CASP9
caspase 9
severity disease_progression
ISO
RGD
PMID:12172380 PMID:15307896
RGD:5509821 RGD:632018
NCBI chr 1:14,630,659...14,662,865
Ensembl chr 1:15,624,666...15,656,266
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CCNG1
cyclin G1
treatment
ISO
RGD
PMID:18612315 PMID:24398934
RGD:151356934 RGD:151356935
NCBI chr 5:158,814,563...158,822,019
Ensembl chr 5:165,592,971...165,598,728
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CD163
CD163 molecule
ISO
protein:increased expression:brain, macrophage (rat)
RGD
PMID:22583855
RGD:127285798
NCBI chr12:7,616,714...7,649,768
Ensembl chr12:7,775,343...7,810,023
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CD8A
CD8 subunit alpha
ISO
mRNA:increased expression:brain (mouse)
RGD
PMID:31383034
RGD:124715446
NCBI chr2A:86,832,559...86,855,772
Ensembl chr2A:88,377,722...88,382,635
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CIT
citron rho-interacting serine/threonine kinase
ISO
mRNA:decreased expression:cerebral cortex��(rat)
RGD
PMID:12503083
RGD:2317873
NCBI chr12:117,264,627...117,456,069
Ensembl chr12:120,641,747...120,832,511
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CTNNB1
catenin beta 1
treatment
ISO
RGD
PMID:26296359
RGD:597538582
NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
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CXCL10
C-X-C motif chemokine ligand 10
treatment
ISO
RGD
PMID:26435412
RGD:27095897
NCBI chr 4:48,182,355...48,184,733
Ensembl chr 4:54,020,204...54,022,606
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CXCL12
C-X-C motif chemokine ligand 12
ISO
protein:increased expression:cerebral cortex
RGD
PMID:27614125
RGD:329961568
NCBI chr10:41,296,975...41,384,864
Ensembl chr10:44,552,480...44,564,231
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DRD1
dopamine receptor D1
treatment
ISO
RGD
PMID:24047867
RGD:13506948
NCBI chr 5:170,787,115...170,792,383
Ensembl chr 5:177,688,917...177,690,257
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DRD2
dopamine receptor D2
treatment
ISO
RGD
PMID:24047867
RGD:13506948
NCBI chr11:108,289,838...108,357,174
Ensembl chr11:112,132,703...112,198,935
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FTO
FTO alpha-ketoglutarate dependent dioxygenase
ISO
mRNA:decreased expression:cerebral cortex
RGD
PMID:31992337
RGD:329901857
NCBI chr16:33,939,300...34,343,419
Ensembl chr16:53,023,425...53,490,231
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FUBP1
far upstream element binding protein 1
ISO
RGD
PMID:23797733
RGD:13673879
NCBI chr 1:77,162,675...77,198,486
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GNAL
G protein subunit alpha L
ISO
RGD
PMID:29215295
RGD:13513923
NCBI chr18:2,420,578...2,615,947
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GRIA1
glutamate ionotropic receptor AMPA type subunit 1
ISO
protein:increased phosphorylation:central amygdaloid nucleus (rat)
RGD
PMID:30638118
RGD:405101698
NCBI chr 5:148,879,996...149,206,914
Ensembl chr 5:154,879,080...155,204,660
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ICAM1
intercellular adhesion molecule 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:28642177
NCBI chr19:9,821,402...9,837,021
Ensembl chr19:10,484,414...10,500,605
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IL1B
interleukin 1 beta
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:28642177
NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
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ITGB1
integrin subunit beta 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:25668593
NCBI chr10:33,023,573...33,081,384
Ensembl chr10:33,608,978...33,644,031
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LAMA1
laminin subunit alpha 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:25668593
NCBI chr18:7,159,568...7,335,363
Ensembl chr18:9,482,895...9,656,800
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LAMP2
lysosomal associated membrane protein 2
ISO
protein:increased expression:hippocampus:
RGD
PMID:28365875
RGD:13703062
NCBI chr X:109,700,185...109,743,579
Ensembl chr X:119,886,982...119,929,896
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LCN2
lipocalin 2
ISO
RGD
PMID:31539545
RGD:126781751
NCBI chr 9:99,259,278...99,274,494
Ensembl chr 9:127,940,799...127,944,798
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LOC100988273
cytochrome P450 2D6-like
treatment
ISO
RGD
PMID:26068867
RGD:401901590
NCBI chr22:23,022,449...23,031,627
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MAPT
microtubule associated protein tau
treatment
ISO
RGD
PMID:25771151 PMID:26484783 PMID:26729399 PMID:28412141
RGD:13800902 RGD:13800909 RGD:13800912 RGD:13800917
NCBI chr17:11,373,220...11,506,669
Ensembl chr17:11,458,159...11,523,129
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METTL14
methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit
ISO
mRNA:decreased expression:cerebral cortex
RGD
PMID:31992337
RGD:329901857
NCBI chr 4:110,879,137...110,905,131
Ensembl chr 4:121,431,026...121,458,392
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MMP2
matrix metallopeptidase 2
ISO
protein:increased expression:cerebral cortex
RGD
PMID:27614125
RGD:329961568
NCBI chr16:35,711,866...35,738,881
Ensembl chr16:54,812,694...54,844,279
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MMP9
matrix metallopeptidase 9
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:25668593
NCBI chr20:42,346,305...42,354,018
Ensembl chr20:43,432,389...43,440,129
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MPO
myeloperoxidase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:25668593
NCBI chr17:52,333,882...52,357,838
Ensembl chr17:57,201,073...57,212,111
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NCSTN
nicastrin
ISO
RGD
PMID:18240300
RGD:13801189
NCBI chr 1:135,697,592...135,713,293
Ensembl chr 1:139,618,229...139,633,911
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NFE2L2
NFE2 like bZIP transcription factor 2
ISO
protein:increased expression:brain:
RGD
PMID:30855558
RGD:26884463
NCBI chr2B:64,509,446...64,544,600
Ensembl chr2B:182,214,116...182,248,085
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NGF
nerve growth factor
treatment
ISO
RGD
PMID:26285082
RGD:402463964
NCBI chr 1:87,223,597...87,276,759
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NMNAT1
nicotinamide nucleotide adenylyltransferase 1
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:27822499
NCBI chr 1:8,712,798...8,753,027
Ensembl chr 1:9,942,491...9,982,364
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NOS2
nitric oxide synthase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:28642177
NCBI chr17:28,984,295...29,021,516
Ensembl chr17:29,471,510...29,617,093
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NOX1
NADPH oxidase 1
ISO
protein:increased expression:cerebral cortex
RGD
PMID:27614125
RGD:329961568
NCBI chr X:90,046,023...90,076,968
Ensembl chr X:100,182,398...100,215,192
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NR3C1
nuclear receptor subfamily 3 group C member 1
ISO
protein:increased phosphorylation:amygdala mRNA:decreased expression:hippocampus, hypothalamus
RGD
PMID:30638118 PMID:36637480
RGD:405101698 RGD:408364984
NCBI chr 5:138,634,278...139,089,171
Ensembl chr 5:144,741,452...144,865,269
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NTRK2
neurotrophic receptor tyrosine kinase 2
ISO
mRNA:increased expression:dentate gyrus
RGD
PMID:10925157
RGD:596936229
NCBI chr 9:39,663,986...40,208,770
Ensembl chr 9:84,021,837...84,372,678
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OCLN
occludin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:25668593
NCBI chr 5:44,447,230...44,509,637
Ensembl chr 5:46,023,437...46,069,342
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PARP1
poly(ADP-ribose) polymerase 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15829224 PMID:28642177
NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356
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PDE10A
phosphodiesterase 10A
ISO
RGD
PMID:29215295
RGD:13513923
NCBI chr 6:163,274,252...163,612,749
Ensembl chr 6:168,265,707...168,645,231
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PDYN
prodynorphin
ISO
mRNA:increased expression:hippocampus
RGD
PMID:12626770
RGD:633616
NCBI chr20:2,092,171...2,108,141
Ensembl chr20:1,856,850...1,872,452
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PHACTR1
phosphatase and actin regulator 1
treatment
ISO
RGD
PMID:36571365
RGD:401901253
NCBI chr 6:12,560,862...13,136,126
Ensembl chr 6:12,922,871...13,505,609
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PPP3R1
protein phosphatase 3 regulatory subunit B, alpha
ISO
RGD
PMID:20713027
RGD:13830881
NCBI chr2A:68,227,282...68,300,482
G
PPP3R2
protein phosphatase 3 regulatory subunit B, beta
ISO
RGD
PMID:20713027
RGD:13830881
NCBI chr 9:72,796,099...72,799,499
G
PSEN1
presenilin 1
ISO
RGD
PMID:18240300
RGD:13801189
NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876
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PTGS2
prostaglandin-endoperoxide synthase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:28642177
NCBI chr 1:162,205,534...162,214,130
Ensembl chr 1:166,355,845...166,364,519
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RELA
RELA proto-oncogene, NF-kB subunit
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:25668593 PMID:28642177
NCBI chr11:61,012,839...61,022,225
Ensembl chr11:64,347,859...64,356,868
G
SOX2
SRY-box transcription factor 2
treatment
ISO
RGD
PMID:26296359
RGD:597538582
NCBI chr 3:178,744,881...178,747,392
Ensembl chr 3:186,922,705...186,923,662
G
TGFB1
transforming growth factor beta 1
treatment
ISO
RGD
PMID:28433746
RGD:14995478
NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
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TNF
tumor necrosis factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:28642177
NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
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TP53
tumor protein p53
treatment
ISO
RGD
PMID:27553877
RGD:14995939
NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
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UBE4B
ubiquitination factor E4B
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:27822499
NCBI chr 1:8,801,707...8,949,465
Ensembl chr 1:10,033,084...10,178,759
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WNT3A
Wnt family member 3A
treatment
ISO
RGD
PMID:26296359
RGD:597538582
NCBI chr 1:203,409,294...203,463,214
Ensembl chr 1:208,628,706...208,674,469
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F7
coagulation factor VII
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:20370756
NCBI chr13:94,246,694...94,261,133
Ensembl chr13:113,315,868...113,329,995
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ABCC8
ATP binding cassette subfamily C member 8
treatment
ISO
RGD
PMID:18854840
RGD:2325137
NCBI chr11:17,447,564...17,531,513
Ensembl chr11:17,133,063...17,216,870
G
TP53
tumor protein p53
ISO
RGD
PMID:22977862
RGD:8547771
NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
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ADRB2
adrenoceptor beta 2
ISO
mRNA:increased expression:Vestibulocochlear nerve:
RGD
PMID:22178544
RGD:8548530
NCBI chr 5:144,259,756...144,398,421
Ensembl chr 5:150,267,554...150,315,892
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