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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Renal Cell Carcinoma 1
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Accession:DOID:9006972 term browser browse the term
Synonyms:primary_id: MESH:C538557;   RDO:0004499


show annotations for term's descendants           Sort by:
Renal Cell Carcinoma 1 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:28492532 NCBI chr 4:46,400,485...46,456,085 JBrowse link
G Atm ATM serine/threonine kinase ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:10571946 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:62,727,291...62,828,629 		JBrowse link
G C8h11orf65 similar to human chromosome 11 open reading frame 65 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:10571946 NCBI chr 8:62,692,123...62,720,951
Ensembl chr 8:62,692,568...62,720,946 		JBrowse link
G Capza2 capping actin protein of muscle Z-line subunit alpha 2 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:28492532 NCBI chr 4:45,978,142...46,014,032
Ensembl chr 4:46,895,701...46,979,938 		JBrowse link
G Cftr CF transmembrane conductance regulator ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:28492532 NCBI chr 4:47,422,084...47,694,646
Ensembl chr 4:47,526,735...47,694,643 		JBrowse link
G Ctnnb1 catenin beta 1 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:26822237 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:129,517,545...129,544,662 		JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:9140397 PMID:9326629 PMID:9536098 PMID:9563489 PMID:9731534 More... NCBI chr 4:46,756,823...46,864,041
Ensembl chr 4:46,756,506...46,870,821 		JBrowse link
G Msh2 mutS homolog 2 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:18325052 PMID:21926548 PMID:24506336 PMID:24763289 PMID:25637381 More... NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:12,567,368...12,626,503 		JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:25741868 PMID:28492532 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:164,167,928...164,277,435 		JBrowse link
G Prcc proline rich mitotic checkpoint control factor ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:25741868 NCBI chr 2:175,624,134...175,649,664
Ensembl chr 2:175,624,134...175,649,664 		JBrowse link
G Sdhb succinate dehydrogenase complex iron sulfur subunit B ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:18728283 PMID:19576851 PMID:22835832 PMID:24055113 PMID:24092654 More... NCBI chr 5:158,547,775...158,568,589
Ensembl chr 5:158,547,689...158,569,667 		JBrowse link
G St7 suppression of tumorigenicity 7 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:28492532 NCBI chr 4:46,041,655...46,289,745
Ensembl chr 4:47,008,095...47,255,637 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:7563486 PMID:7784063 PMID:7977367 PMID:7987306 PMID:8493574 More... NCBI chr 4:148,328,099...148,334,992
Ensembl chr 4:148,328,079...148,334,991 		JBrowse link
G Wnt2 Wnt family member 2 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:28492532 NCBI chr 4:47,294,300...47,340,284
Ensembl chr 4:47,294,300...47,421,976 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 19167
    disease of cellular proliferation 7905
      cancer 5732
        cell type cancer 3786
          carcinoma 3274
            adenocarcinoma 1700
              renal cell carcinoma 355
                Renal Cell Carcinoma 1 14
Path 2
Term Annotations click to browse term
  disease 19167
    disease of cellular proliferation 7905
      Neoplasms by Site 7344
        Urogenital Neoplasms 2350
          Urologic Neoplasms 729
            urinary system cancer 678
              kidney cancer 478
                renal carcinoma 361
                  renal cell carcinoma 355
                    Renal Cell Carcinoma 1 14
paths to the root