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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Salmonella Infections, Animal
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Accession:DOID:9005099 term browser browse the term
Definition:Infections in animals with bacteria of the genus SALMONELLA.
Synonyms:exact_synonym: Animal Salmonella Infection
 primary_id: MESH:D012481;   RDO:0006519


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Salmonella Infections, Animal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase, RNA-specific ISO mRNA:splice variant:liver (mouse) RGD PMID:12228285 RGD:125097511 NCBI chr 2:175,138,391...175,178,280
Ensembl chr 2:175,138,403...175,178,282 		JBrowse link
G Ahr aryl hydrocarbon receptor severity ISO RGD PMID:24930766 RGD:39939032 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568 		JBrowse link
G Aicda activation-induced cytidine deaminase severity ISO RGD PMID:29743315 RGD:127285640 NCBI chr 4:155,774,132...155,783,972
Ensembl chr 4:155,774,132...155,783,972 		JBrowse link
G Ank1 ankyrin 1 ISO RGD PMID:23390527 RGD:11041609 NCBI chr16:68,876,294...69,054,963
Ensembl chr16:68,877,504...69,054,759 		JBrowse link
G Hamp hepcidin antimicrobial peptide ISO RGD PMID:23390527 RGD:11041609 NCBI chr 1:86,170,926...86,172,865
Ensembl chr 1:86,170,901...86,172,891 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 susceptibility ISO RGD PMID:24930766 RGD:39939032 NCBI chr16:67,430,654...67,442,726
Ensembl chr16:67,430,578...67,442,730 		JBrowse link
G Ifng interferon gamma ISO CTD Direct Evidence: marker/mechanism CTD PMID:16002714 NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 ISO RGD PMID:14734525 RGD:5684962 NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101 		JBrowse link
G Tlr5 toll-like receptor 5 IEP mRNA, protein:increased expression:jejunum, colon (rat) RGD PMID:20529359 RGD:5129497 NCBI chr13:94,634,778...94,658,992
Ensembl chr13:94,634,801...94,657,738 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 19100
    Animal Diseases 1753
      Salmonella Infections, Animal 9
Path 2
Term Annotations click to browse term
  disease 19100
    disease by infectious agent 2253
      Bacterial Infections and Mycoses 1118
        bacterial infectious disease 824
          Gram-Negative Bacterial Infections 200
            Enterobacteriaceae Infections 47
              salmonellosis 17
                Salmonella Infections, Animal 9
paths to the root