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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Brain Contusion
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Accession:DOID:9005020 term browser browse the term
Definition:A bruise of the brain from an impact of the skull.
Synonyms:exact_synonym: Brain Contusions;   Cerebellar Contusion;   Cerebellar Contusions;   Cerebral Contusion;   Cerebral Contusions;   Contusio Cerebri;   Cortical Contusion;   Cortical Contusions
 primary_id: MESH:D000070624


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Brain Contusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3 complement C3 ameliorates IMP RGD PMID:31654641 RGD:408418727 NCBI chr 9:2,174,412...2,201,339
Ensembl chr 9:2,087,437...2,114,429 		JBrowse link
G Casp3 caspase 3 treatment IEP RGD PMID:28140659 RGD:13782305 NCBI chr16:52,395,539...52,413,794
Ensembl chr16:45,662,910...45,684,648 		JBrowse link
G Casp8 caspase 8 treatment IEP RGD PMID:28140659 RGD:13782305 NCBI chr 9:67,747,109...67,806,699
Ensembl chr 9:60,264,075...60,312,542 		JBrowse link
G Il1b interleukin 1 beta treatment IEP RGD PMID:31654641 RGD:408418727 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:116,577,010...116,583,415 		JBrowse link
G Pycard PYD and CARD domain containing treatment IMP RGD PMID:19401709 RGD:5491174 NCBI chr 1:192,032,124...192,033,419
Ensembl chr 1:182,601,174...182,602,955 		JBrowse link
G Tnf tumor necrosis factor treatment IEP RGD PMID:31654641 RGD:408418727 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 19143
    Wounds and Injuries 1004
      Nonpenetrating Wounds 25
        Contusions 16
          Brain Contusion 6
Path 2
Term Annotations click to browse term
  disease 19143
    disease of anatomical entity 18456
      nervous system disease 14362
        Nervous System Trauma 612
          Craniocerebral Trauma 373
            Brain Injuries 300
              traumatic brain injury 68
                Brain Contusion 6
paths to the root