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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Strongylida Infections
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Accession:DOID:9003369 term browser browse the term
Definition:Infections with nematodes of the order STRONGYLIDA.
Synonyms:exact_synonym: Stephanurus dentatus Infection;   Stephanurus dentatus Infections;   Strongylida Infection;   Syngamiases;   Syngamiasis
 primary_id: MESH:D017206
 xref: EFO:0007500



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Strongylida Infections term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase ISO RGD PMID:23630966 RGD:32716404 NCBI chr12:8,602,170...8,612,859
Ensembl chr12:8,602,155...8,613,242
JBrowse link
G IL3 interleukin 3 ISO RGD PMID:20500666 RGD:5686890 NCBI chr 5:132,060,655...132,063,204
Ensembl chr 5:132,060,655...132,063,204
JBrowse link
G IL33 interleukin 33 ISO mRNA:increased expression:lung RGD PMID:22331917 RGD:40400742 NCBI chr 9:6,215,149...6,257,983
Ensembl chr 9:6,215,786...6,257,983
JBrowse link
G PLAU plasminogen activator, urokinase ISO RGD PMID:18022622 RGD:6484141 NCBI chr10:73,909,164...73,917,494
Ensembl chr10:73,909,177...73,917,496
JBrowse link
angiostrongyliasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL1RL1 interleukin 1 receptor like 1 treatment ISO mRNA:increased expression:brain: RGD PMID:24657070 PMID:23148283 RGD:11561855, RGD:40400713 NCBI chr 2:102,311,563...102,352,356
Ensembl chr 2:102,311,502...102,352,037
JBrowse link
G IL33 interleukin 33 ISO protein:increased expression:brain: RGD PMID:23148283 PMID:24076431 RGD:40400713, RGD:40400715 NCBI chr 9:6,215,149...6,257,983
Ensembl chr 9:6,215,786...6,257,983
JBrowse link
G IL5 interleukin 5 ISO RGD PMID:8361777 RGD:11354948 NCBI chr 5:132,541,445...132,556,815
Ensembl chr 5:132,541,445...132,556,838
JBrowse link
G MAG myelin associated glycoprotein disease_progression ISO RGD PMID:20399564 RGD:27226693 NCBI chr19:35,292,161...35,313,807
Ensembl chr19:35,292,125...35,313,807
JBrowse link
G MBP myelin basic protein disease_progression ISO RGD PMID:20399564 RGD:27226693 NCBI chr18:76,978,833...77,133,708
Ensembl chr18:76,978,827...77,133,683
JBrowse link
G MOBP myelin associated oligodendrocyte basic protein disease_progression ISO RGD PMID:20399564 RGD:27226693 NCBI chr 3:39,467,680...39,529,497
Ensembl chr 3:39,467,198...39,529,479
JBrowse link
Hookworm Infections term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL1RL1 interleukin 1 receptor like 1 ISO RGD PMID:22329990 RGD:39938827 NCBI chr 2:102,311,563...102,352,356
Ensembl chr 2:102,311,502...102,352,037
JBrowse link
G IL33 interleukin 33 ISO mRNA,protein:increased expression:Bronchoalveolar lavage, epithelium, macrophage RGD PMID:22329990 RGD:39938827 NCBI chr 9:6,215,149...6,257,983
Ensembl chr 9:6,215,786...6,257,983
JBrowse link
G TFF2 trefoil factor 2 ISO RGD PMID:22329990 RGD:39938827 NCBI chr21:42,346,357...42,350,994
Ensembl chr21:42,346,357...42,350,997
JBrowse link
strongyloidiasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL18 interleukin 18 treatment ISO RGD PMID:16129701 RGD:8655932 NCBI chr11:112,143,260...112,164,094
Ensembl chr11:112,143,251...112,164,096
JBrowse link
G IL5 interleukin 5 severity ISO RGD PMID:9824515 RGD:11354934 NCBI chr 5:132,541,445...132,556,815
Ensembl chr 5:132,541,445...132,556,838
JBrowse link
trichostrongyloidiasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP1 forkhead box P1 ISO mRNA:increased expression:duodenum (rat) RGD PMID:21698235 RGD:11561920 NCBI chr 3:70,954,708...71,583,978
Ensembl chr 3:70,954,693...71,583,978
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 121159
    disease by infectious agent 4597
      parasitic infectious disease 576
        parasitic helminthiasis infectious disease 92
          Nematode Infections 48
            Secernentea Infections 32
              Strongylida Infections 12
                Equine Strongyle Infections 0
                Hookworm Infections + 3
                angiostrongyliasis 6
                oesophagostomiasis 0
                strongyloidiasis 2
                trichostrongyloidiasis + 1
paths to the root