RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term: Strongylida Infections
Accession: DOID:9003369
browse the term
Definition: Infections with nematodes of the order STRONGYLIDA.
Synonyms: exact_synonym: Stephanurus dentatus Infection; Stephanurus dentatus Infections; Strongylida Infection; Syngamiases; Syngamiasis
primary_id: MESH:D017206
xref: EFO:0007500
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AICDA
activation induced cytidine deaminase
ISO
RGD
PMID:23630966
RGD:32716404
NCBI chr12:8,688,392...8,699,008
Ensembl chr12:8,904,273...8,913,917
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IL3
interleukin 3
ISO
RGD
PMID:20500666
RGD:5686890
NCBI chr 5:127,483,843...127,486,388
Ensembl chr 5:133,647,667...133,650,213
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IL33
interleukin 33
ISO
mRNA:increased expression:lung
RGD
PMID:22331917
RGD:40400742
NCBI chr 9:6,027,014...6,069,540
Ensembl chr 9:6,234,178...6,248,624
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PLAU
plasminogen activator, urokinase
ISO
RGD
PMID:18022622
RGD:6484141
NCBI chr10:70,433,340...70,441,569
Ensembl chr10:73,105,895...73,113,136
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IL1RL1
interleukin 1 receptor like 1
treatment
ISO
mRNA:increased expression:brain:
RGD
PMID:23148283 PMID:24657070
RGD:11561855 RGD:40400713
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IL33
interleukin 33
ISO
protein:increased expression:brain:
RGD
PMID:23148283 PMID:24076431
RGD:40400713 RGD:40400715
NCBI chr 9:6,027,014...6,069,540
Ensembl chr 9:6,234,178...6,248,624
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IL5
interleukin 5
ISO
RGD
PMID:8361777
RGD:11354948
NCBI chr 5:127,955,377...127,961,726
Ensembl chr 5:134,119,608...134,121,675
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MAG
myelin associated glycoprotein
disease_progression
ISO
RGD
PMID:20399564
RGD:27226693
NCBI chr19:32,238,457...32,260,497
Ensembl chr19:40,975,763...40,997,401
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MBP
myelin basic protein
disease_progression
ISO
RGD
PMID:20399564
RGD:27226693
NCBI chr18:70,369,882...70,526,693
Ensembl chr18:73,629,522...73,755,351
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MOBP
myelin associated oligodendrocyte basic protein
disease_progression
ISO
RGD
PMID:20399564
RGD:27226693
NCBI chr 3:39,372,102...39,450,066
Ensembl chr 3:39,688,104...39,699,486
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IL1RL1
interleukin 1 receptor like 1
ISO
RGD
PMID:22329990
RGD:39938827
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IL33
interleukin 33
ISO
mRNA,protein:increased expression:Bronchoalveolar lavage, epithelium, macrophage
RGD
PMID:22329990
RGD:39938827
NCBI chr 9:6,027,014...6,069,540
Ensembl chr 9:6,234,178...6,248,624
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TFF2
trefoil factor 2
ISO
RGD
PMID:22329990
RGD:39938827
NCBI chr21:28,653,077...28,657,709
Ensembl chr21:41,973,111...41,977,227
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IL18
interleukin 18
treatment
ISO
RGD
PMID:16129701
RGD:8655932
NCBI chr11:107,024,376...107,045,194
Ensembl chr11:110,867,586...110,888,371
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IL5
interleukin 5
severity
ISO
RGD
PMID:9824515
RGD:11354934
NCBI chr 5:127,955,377...127,961,726
Ensembl chr 5:134,119,608...134,121,675
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FOXP1
forkhead box P1
ISO
mRNA:increased expression:duodenum (rat)
RGD
PMID:21698235
RGD:11561920
NCBI chr 3:70,893,933...71,523,892
Ensembl chr 3:72,258,456...72,498,173
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