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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Strongylida Infections
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Accession:DOID:9003369 term browser browse the term
Definition:Infections with nematodes of the order STRONGYLIDA.
Synonyms:exact_synonym: Stephanurus dentatus Infection;   Stephanurus dentatus Infections;   Strongylida Infection;   Syngamiases;   Syngamiasis
 primary_id: MESH:D017206
 xref: EFO:0007500



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Strongylida Infections term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase ISO RGD PMID:23630966 RGD:32716404 NCBI chr12:8,688,392...8,699,008
Ensembl chr12:8,904,273...8,913,917
JBrowse link
G IL3 interleukin 3 ISO RGD PMID:20500666 RGD:5686890 NCBI chr 5:127,483,843...127,486,388
Ensembl chr 5:133,647,667...133,650,213
JBrowse link
G IL33 interleukin 33 ISO mRNA:increased expression:lung RGD PMID:22331917 RGD:40400742 NCBI chr 9:6,027,014...6,069,540
Ensembl chr 9:6,234,178...6,248,624
JBrowse link
G PLAU plasminogen activator, urokinase ISO RGD PMID:18022622 RGD:6484141 NCBI chr10:70,433,340...70,441,569
Ensembl chr10:73,105,895...73,113,136
JBrowse link
angiostrongyliasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL1RL1 interleukin 1 receptor like 1 treatment ISO mRNA:increased expression:brain: RGD PMID:23148283 PMID:24657070 RGD:11561855 RGD:40400713
G IL33 interleukin 33 ISO protein:increased expression:brain: RGD PMID:23148283 PMID:24076431 RGD:40400713 RGD:40400715 NCBI chr 9:6,027,014...6,069,540
Ensembl chr 9:6,234,178...6,248,624
JBrowse link
G IL5 interleukin 5 ISO RGD PMID:8361777 RGD:11354948 NCBI chr 5:127,955,377...127,961,726
Ensembl chr 5:134,119,608...134,121,675
JBrowse link
G MAG myelin associated glycoprotein disease_progression ISO RGD PMID:20399564 RGD:27226693 NCBI chr19:32,238,457...32,260,497
Ensembl chr19:40,975,763...40,997,401
JBrowse link
G MBP myelin basic protein disease_progression ISO RGD PMID:20399564 RGD:27226693 NCBI chr18:70,369,882...70,526,693
Ensembl chr18:73,629,522...73,755,351
JBrowse link
G MOBP myelin associated oligodendrocyte basic protein disease_progression ISO RGD PMID:20399564 RGD:27226693 NCBI chr 3:39,372,102...39,450,066
Ensembl chr 3:39,688,104...39,699,486
JBrowse link
Hookworm Infections term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL1RL1 interleukin 1 receptor like 1 ISO RGD PMID:22329990 RGD:39938827
G IL33 interleukin 33 ISO mRNA,protein:increased expression:Bronchoalveolar lavage, epithelium, macrophage RGD PMID:22329990 RGD:39938827 NCBI chr 9:6,027,014...6,069,540
Ensembl chr 9:6,234,178...6,248,624
JBrowse link
G TFF2 trefoil factor 2 ISO RGD PMID:22329990 RGD:39938827 NCBI chr21:28,653,077...28,657,709
Ensembl chr21:41,973,111...41,977,227
JBrowse link
strongyloidiasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL18 interleukin 18 treatment ISO RGD PMID:16129701 RGD:8655932 NCBI chr11:107,024,376...107,045,194
Ensembl chr11:110,867,586...110,888,371
JBrowse link
G IL5 interleukin 5 severity ISO RGD PMID:9824515 RGD:11354934 NCBI chr 5:127,955,377...127,961,726
Ensembl chr 5:134,119,608...134,121,675
JBrowse link
trichostrongyloidiasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP1 forkhead box P1 ISO mRNA:increased expression:duodenum (rat) RGD PMID:21698235 RGD:11561920 NCBI chr 3:70,893,933...71,523,892
Ensembl chr 3:72,258,456...72,498,173
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15834
    disease by infectious agent 2144
      parasitic infectious disease 300
        parasitic helminthiasis infectious disease 72
          Nematode Infections 35
            Secernentea Infections 20
              Strongylida Infections 12
                Equine Strongyle Infections 0
                Hookworm Infections + 3
                angiostrongyliasis 6
                oesophagostomiasis 0
                strongyloidiasis 2
                trichostrongyloidiasis + 1
paths to the root