RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
G
Agt
angiotensinogen
treatment
IEP
RGD
PMID:22089474
RGD:8548895
NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
G
Agtr1a
angiotensin II receptor, type 1a
treatment
IMP
RGD
PMID:22089474
RGD:8548895
NCBI chr17:34,173,446...34,226,892
Ensembl chr17:34,174,429...34,226,946
G
Cfl1
cofilin 1
IEP
protein:increased phosphorylation:kidney (rat)
RGD
PMID:26450610
RGD:11520804
NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
G
Col1a1
collagen type I alpha 1 chain
IEP
mRNA:increased expression:juxtamedullary cortex (rat)
RGD
PMID:17977875
RGD:2290351
NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
G
Hp
haptoglobin
treatment
IEP
RGD
PMID:24029866
RGD:11041817
NCBI chr19:37,539,626...37,544,178
Ensembl chr19:37,539,627...37,544,523
G
Mmp2
matrix metallopeptidase 2
ameliorates
IMP
RGD
PMID:37643020
RGD:401827835
NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
G
Mmp2em2Mcwi
matrix metallopeptidase 2; zinc finger nuclease induced mutant 2, Medical College of Wisconsin
ameliorates
IMP
RGD
PMID:37643020
RGD:401827835
G
Nppb
natriuretic peptide B
IMP
RGD
PMID:26063669
RGD:12910116
NCBI chr 5:158,416,813...158,418,175
Ensembl chr 5:158,416,866...158,418,168
G
Nppbem2Mcwi
natriuretic peptide B; zinc finger nuclease induced mutant 2, Medical College of Wisconsin
IMP
RGD
PMID:26063669
RGD:12910116
G
Postn
periostin
disease_progression
IEP
mRNA,protein:increased expression:kidney:
RGD
PMID:22403621
RGD:10041032
NCBI chr 2:138,527,714...138,559,098
Ensembl chr 2:138,527,696...138,559,099
G
Ppara
peroxisome proliferator activated receptor alpha
IDA
Strain: SHRSP
RGD
PMID:20671072
RGD:5509943
NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346
G
Rag1
recombination activating 1
ameliorates
IMP
RGD
PMID:23364523 PMID:23364523
RGD:7207429 , RGD:7207429
NCBI chr 3:87,917,061...87,928,158
Ensembl chr 3:87,917,004...87,928,291
G
Rag1em1Mcwi
recombination activating gene 1; zinc finger nuclease induced mutant 1, Medical College of Wisconsin
ameliorates
IMP
RGD
PMID:23364523
RGD:7207429
G
Shc1
SHC adaptor protein 1
IMP IEP
protein:increased expression:kidney
RGD
PMID:27270176 PMID:27270176
RGD:12792230 , RGD:12792230
NCBI chr 2:174,837,937...174,849,538
Ensembl chr 2:174,837,930...174,849,536
G
Shc1em5Mcwi
SHC adaptor protein 1; ZFN induced mutant 5, Medical College of Wisconsin
IMP
RGD
PMID:27270176
RGD:12792230
G
Sirt6
sirtuin 6
ISO
protein:decreased expression:kidney
RGD
PMID:30894089
RGD:155260334
NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914
G
Calca
calcitonin-related polypeptide alpha
ISO
RGD
PMID:15928032
RGD:7204486
NCBI chr 1:168,878,212...168,883,176
Ensembl chr 1:168,878,214...168,883,105
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all