Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Spinal Injuries
go back to main search page
Accession:DOID:9001077 term browser browse the term
Definition:Injuries involving the vertebral column.
Synonyms:exact_synonym: Spinal Injury
 primary_id: MESH:D013124


show annotations for term's descendants           Sort by:
Spinal Fractures term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing susceptibility ISO DNA:SNP::rs1501299(human) RGD PMID:24570271 RGD:598092492 NCBI chr11:91,226,524...91,240,244
Ensembl chr11:77,721,912...77,735,564 		JBrowse link
G Bglap bone gamma-carboxyglutamate protein disease_progression ISO associated with osteoporosis
associated with Diabetes Mellitus, Type 2; 		RGD PMID:12697366 PMID:19641839 RGD:7207225, RGD:7207248 NCBI chr 2:176,136,341...176,137,318
Ensembl chr 2:173,838,518...173,839,495 		JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist susceptibility ISO DNA:SNPs: :rs3747532, rs1494360(human) RGD PMID:19113921 RGD:35673321 NCBI chr 5:102,352,364...102,355,720
Ensembl chr 5:97,306,431...97,309,783 		JBrowse link
G Esr1 estrogen receptor 1 no_association
susceptibility 		ISO DNA:mutation, SNP:intron, exon: , 274G>C (human)
DNA:SNPs, haplotype:intron:g.-397T>C, g.-351A>G (human) 		RGD PMID:12183765 PMID:12915669 RGD:10045833, RGD:10045836 NCBI chr 1:43,511,685...43,904,454
Ensembl chr 1:41,210,475...41,495,002 		JBrowse link
G Igfbp3 insulin-like growth factor binding protein 3 ISO associated with Osteoporosis;protein:decreased expression:serum RGD PMID:9258758 RGD:10402578 NCBI chr14:82,056,347...82,064,083
Ensembl chr14:82,056,347...82,064,083 		JBrowse link
G Lepr leptin receptor susceptibility ISO DNA:SNP:cds:p.Q223R(human) RGD PMID:17243864 RGD:10411889 NCBI chr 5:121,409,735...121,593,201
Ensembl chr 5:116,289,823...116,475,908 		JBrowse link
G Runx2 RUNX family transcription factor 2 susceptibility ISO DNA:SNP::In rs7771980(human) RGD PMID:24570271 RGD:598092492 NCBI chr 9:23,661,278...23,990,248
Ensembl chr 9:16,167,482...16,492,167 		JBrowse link
G S100b S100 calcium binding protein B ISO protein:increased expression:serum RGD PMID:20304889 RGD:5508786 NCBI chr20:12,372,866...12,381,619
Ensembl chr20:12,372,881...12,394,743 		JBrowse link
G Vdr vitamin D receptor susceptibility ISO DNA:mutations, haplotype:intron, exon: (human) RGD PMID:12915669 RGD:10045836 NCBI chr 7:130,864,764...130,916,757
Ensembl chr 7:128,987,981...129,037,677 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 19143
    Wounds and Injuries 1004
      Back Injuries 9
        Spinal Injuries 9
          Spinal Fractures 9
paths to the root