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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:large intestine cancer
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Accession:DOID:5672 term browser browse the term
Definition:An intestinal cancer that effects the long, tube-like organ that is connected to the small intestine at one end and the anus at the other. (DO)
For additional species annotation, visit the Alliance of Genome Resources.

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show annotations for term's descendants           Sort by:
ascending colon cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Malignant tumor of ascending colon ClinVar PMID:25741868 PMID:28492532 PMID:30093976 NCBI chr23:15,992,437...16,135,117
Ensembl chr23:16,042,287...16,137,067 		JBrowse link
G MSH2 mutS homolog 2 ISO ClinVar Annotator: match by term: Malignant tumor of ascending colon ClinVar PMID:9311737 PMID:9718327 PMID:11208710 PMID:11524701 PMID:11601928 More... NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit susceptibility
onset 		ISO DNA:missense mutation:CDS, exon 9:p.P286R (human)
DNA:mutations:multiple (human)
DNA:mutations:multiple (human, non-Asian) 		RGD PMID:27612425 PMID:28404093 PMID:33125191 RGD:151347640 RGD:151347649 RGD:151347651 NCBI chr11:127,966,879...128,030,442
Ensembl chr11:127,965,896...128,030,292 		JBrowse link
G RNF43 ring finger protein 43 exacerbates ISO DNA:nonsense mutation, frameshift mutations:CDS:multiple (human) RGD PMID:32236609 RGD:151361217 NCBI chr16:34,981,126...35,046,478
Ensembl chr16:34,980,922...35,045,107 		JBrowse link
colon adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD5 abhydrolase domain containing 5, lysophosphatidic acid acyltransferase disease_progression ISO mRNA:decreased expression:colon (human)
human cells in mouse model 		RGD PMID:30842415 RGD:153002829 NCBI chr22:5,109,699...5,139,021
Ensembl chr22:5,109,765...5,137,673 		JBrowse link
G ANXA7 annexin A7 ISO protein:decreased expression:colon RGD PMID:17708571 RGD:2292654 NCBI chr 9:57,863,482...57,900,972
Ensembl chr 9:57,863,546...57,900,324 		JBrowse link
G APC APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Colon adenocarcinoma ClinVar PMID:24033266 PMID:24728327 PMID:25741868 PMID:27978560 PMID:28492532 NCBI chr23:15,992,437...16,135,117
Ensembl chr23:16,042,287...16,137,067 		JBrowse link
G ARID1A AT-rich interaction domain 1A disease_progression ISO protein:decreased expression:colorectum (human) RGD PMID:26980037 RGD:126790569 NCBI chr20:105,981,549...106,066,093
Ensembl chr20:105,981,290...106,065,672 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator susceptibility ISO DNA:frameshift mutation: ; RGD PMID:9020077 RGD:734633 NCBI chr 6:42,186,028...42,193,105 JBrowse link
G BCL2 BCL2 apoptosis regulator treatment ISO human cells in mouse model RGD PMID:32504672 RGD:125097526 NCBI chr18:16,440,560...16,643,187
Ensembl chr18:16,441,733...16,637,895 		JBrowse link
G BTK Bruton tyrosine kinase ISO mRNA:decreased expression:colon (human) RGD PMID:31402962 RGD:151347853 NCBI chr  X:89,690,569...89,727,420 JBrowse link
G CA12 carbonic anhydrase 12 disease_progression ISO RGD PMID:35847888 RGD:153352327 NCBI chr26:20,162,706...20,221,680
Ensembl chr26:20,162,926...20,224,502 		JBrowse link
G CACNA1D calcium voltage-gated channel subunit alpha1 D disease_progression ISO protein:increased expression:colon (human) RGD PMID:29079724 RGD:152177516 NCBI chr22:14,868,459...15,195,002
Ensembl chr22:15,027,565...15,197,101 		JBrowse link
G CALR calreticulin ISO RGD PMID:18812201 RGD:150521683 NCBI chr 6:11,618,691...11,624,299
Ensembl chr 6:11,618,396...11,623,792 		JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 ameliorates ISO human cells in a mouse model RGD PMID:28486105 RGD:153323299 NCBI chr11:6,603,820...6,641,278
Ensembl chr11:6,602,694...6,640,351 		JBrowse link
G CSF1R colony stimulating factor 1 receptor ameliorates ISO human cells in a mouse model
mouse cell line in a mouse model 		RGD PMID:24898549 PMID:29436396 PMID:32304779 RGD:150524289 RGD:150524290 RGD:150524303 NCBI chr23:52,663,290...52,723,652
Ensembl chr23:52,664,076...52,697,304 		JBrowse link
G CSF2 colony stimulating factor 2 treatment ISO RGD PMID:10830715 RGD:10450245 NCBI chr23:34,906,987...34,911,252
Ensembl chr23:34,908,911...34,911,140 		JBrowse link
G CTNNB1 catenin beta 1 ISO DNA:mutation RGD PMID:16886601 RGD:1599637 NCBI chr22:2,679,488...2,725,034
Ensembl chr22:2,684,022...2,723,949 		JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 ISO mRNA:increased expression:colonic mucosa (human)
mRNA:increased expression:colon (human) 		RGD PMID:27793774 PMID:33791222 RGD:151665173 RGD:151665790 NCBI chr 2:9,868,794...9,889,510
Ensembl chr 2:9,868,678...9,885,884 		JBrowse link
G DAXX death domain associated protein ISO protein:decreased expression:colon: RGD PMID:16569639 RGD:9587838 NCBI chr17:38,754,227...38,758,714
Ensembl chr17:38,754,280...38,759,071 		JBrowse link
G EEF2 eukaryotic translation elongation factor 2 ISO protein:increased expression:colon(human) RGD PMID:19360331 RGD:153298969 NCBI chr 6:3,733,056...3,742,526
Ensembl chr 6:3,732,425...3,742,826 		JBrowse link
G FECH ferrochelatase ISO mRNA:decreased expression:colon RGD PMID:28075030 RGD:14700888 NCBI chr18:22,143,268...22,182,259
Ensembl chr18:22,143,483...22,182,416 		JBrowse link
G FOSL1 FOS like 1, AP-1 transcription factor subunit ISO protein:increased expression:colon (human) RGD PMID:22419013 RGD:153344572 NCBI chr 1:8,356,263...8,365,606
Ensembl chr 1:8,356,836...8,364,918 		JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit ISO protein:increased expression:colon (human) RGD PMID:22419013 RGD:153344572 NCBI chr14:79,201,128...79,222,363
Ensembl chr14:79,201,649...79,222,373 		JBrowse link
G FOXA1 forkhead box A1 ISO mRNA:decreased expression:colon RGD PMID:32839292 RGD:151665753 NCBI chr24:14,397,759...14,403,078
Ensembl chr24:14,396,702...14,403,094 		JBrowse link
G GATA1 GATA binding protein 1 ISO RGD PMID:31069596 RGD:149735196 NCBI chr  X:45,912,638...45,920,415
Ensembl chr  X:45,917,231...45,920,268 		JBrowse link
G HMGB1 high mobility group box 1 ISO RGD PMID:20616616 RGD:10402080 NCBI chr 3:9,353,333...9,357,765 JBrowse link
G IL21 interleukin 21 treatment ISO RGD PMID:17695518 RGD:127285540 NCBI chr 7:69,859,793...69,872,237
Ensembl chr 7:69,863,535...69,872,025 		JBrowse link
G JAK2 Janus kinase 2 ameliorates
treatment 		ISO human cells in mouse model
Human cell in mouse model 		RGD PMID:22050790 PMID:32504672 RGD:125097526 RGD:127285665 NCBI chr12:74,421,243...74,566,766
Ensembl chr12:74,421,016...74,566,710 		JBrowse link
G KDM6A lysine demethylase 6A ISO DNA:hypermethylation RGD PMID:33174323 RGD:150429730 NCBI chr  X:42,053,272...42,291,013
Ensembl chr  X:42,053,336...42,290,526 		JBrowse link
G LOC103243413 signal transducer and activator of transcription 5B ISO DNA:SNPs:introns: (rs6503691, rs7218653) (human) RGD PMID:22121102 RGD:153323313 NCBI chr16:63,997,486...64,070,392
Ensembl chr16:63,997,441...64,070,445 		JBrowse link
G LOX lysyl oxidase ameliorates ISO RGD PMID:21282564 RGD:150520218 NCBI chr23:25,158,458...25,172,763
Ensembl chr23:25,157,269...25,172,757 		JBrowse link
G MAP2K7 mitogen-activated protein kinase kinase 7 ISO human cell line and gene in a mouse model RGD PMID:18436711 RGD:155630593 NCBI chr 6:7,355,387...7,365,944
Ensembl chr 6:7,355,434...7,364,398 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 ISO RGD PMID:24691442 RGD:13210775 NCBI chr19:4,246,144...4,352,648
Ensembl chr19:4,246,122...4,353,325 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 ISO RGD PMID:24691442 RGD:13210775 NCBI chr 5:26,536,471...26,545,666
Ensembl chr 5:26,536,532...26,546,461 		JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase ISO mRNA:decreased expression:colon (rat) RGD PMID:16886601 RGD:1599637 NCBI chr 9:122,089,768...122,376,320 JBrowse link
G MMP2 matrix metallopeptidase 2 ISO protein:increased expression:colon (human) RGD PMID:22419013 RGD:153344572 NCBI chr 5:41,264,382...41,291,657
Ensembl chr 5:41,264,354...41,291,004 		JBrowse link
G MMP9 matrix metallopeptidase 9 ISO protein:increased expression:colon (human) RGD PMID:22419013 RGD:153344572 NCBI chr 2:17,867,267...17,874,757
Ensembl chr 2:17,867,177...17,874,712 		JBrowse link
G MSH6 mutS homolog 6 ISO ClinVar Annotator: match by term: Colon adenocarcinoma ClinVar PMID:25741868 NCBI chr14:59,375,602...59,400,252
Ensembl chr14:59,375,691...59,400,174 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor exacerbates ISO human cell line in a mouse model RGD PMID:18538140 RGD:150521533 NCBI chr15:1,276,804...1,281,811
Ensembl chr15:1,276,798...1,281,166 		JBrowse link
G NAIP NLR family apoptosis inhibitory protein exacerbates ISO mRNA:increased expression:colon (human) RGD PMID:31964418 RGD:153344516 NCBI chr 4:65,693,044...65,742,527 JBrowse link
G NOS2 nitric oxide synthase 2 ISO protein:increased expression:colon (human) RGD PMID:22419013 RGD:153344572 NCBI chr16:21,533,011...21,576,645
Ensembl chr16:21,533,484...21,574,257 		JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 ISO mRNA:decreased expression:colon: RGD PMID:19737405 RGD:11556207 NCBI chr12:86,907,173...87,367,935
Ensembl chr12:87,042,557...87,367,033 		JBrowse link
G PFAS phosphoribosylformylglycinamidine synthase ISO RGD PMID:6722784 RGD:5135276 NCBI chr16:7,618,952...7,639,700
Ensembl chr16:7,623,817...7,638,594 		JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO DNA:mutation RGD PMID:17575153 RGD:5685670 NCBI chr15:10,218,034...10,304,874
Ensembl chr15:10,218,805...10,294,316 		JBrowse link
G PIK3R3 phosphoinositide-3-kinase regulatory subunit 3 treatment ISO RGD PMID:24632606 RGD:13432053 NCBI chr20:86,651,692...86,748,670
Ensembl chr20:86,651,520...86,745,116 		JBrowse link
G RAC1 Rac family small GTPase 1 treatment ISO mRNA:alternative form RGD PMID:10597294 PMID:19561401 RGD:13432049 RGD:13432051 NCBI chr28:15,583,609...15,610,753
Ensembl chr28:15,583,516...15,610,328 		JBrowse link
G RAD54L RAD54 like ISO ClinVar Annotator: match by term: Colon adenocarcinoma ClinVar PMID:10362365 NCBI chr20:86,510,616...86,542,426
Ensembl chr20:86,507,248...86,542,663 		JBrowse link
G RNASEL ribonuclease L severity ISO RGD PMID:23567782 RGD:40902808 NCBI chr25:46,779,221...46,795,854
Ensembl chr25:46,779,700...46,795,842 		JBrowse link
G RNASET2 ribonuclease T2 ISO human cells in mouse model RGD PMID:30842415 RGD:153002829 NCBI chr13:94,670,376...94,702,585
Ensembl chr13:94,668,580...94,702,587 		JBrowse link
G SLC67A1 solute carrier family 67 member 1 ameliorates ISO mRNA:decreased expression:colorectum (human) RGD PMID:26196590 RGD:11522474 NCBI chr 1:2,712,792...2,737,874
Ensembl chr 1:2,715,027...2,737,872 		JBrowse link
G SMC2 structural maintenance of chromosomes 2 severity ISO human cell line in a mouse model RGD PMID:23095742 RGD:151356955 NCBI chr12:35,377,381...35,423,218
Ensembl chr12:35,374,947...35,423,364 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ameliorates ISO RGD PMID:21282564 RGD:150520218 NCBI chr 2:26,344,480...26,367,448
Ensembl chr 2:26,343,450...26,367,776 		JBrowse link
G SRSF4 serine and arginine rich splicing factor 4 ISO mRNA:decreased expression:colon mucosa (human) RGD PMID:9865741 RGD:11039405 NCBI chr20:103,641,650...103,674,066
Ensembl chr20:103,642,150...103,673,391 		JBrowse link
G SRSF5 serine and arginine rich splicing factor 5 ISO mRNA:decreased expression:colon mucosa (human) RGD PMID:9865741 RGD:11039405 NCBI chr24:47,009,211...47,014,108
Ensembl chr24:47,009,122...47,013,644 		JBrowse link
G SRSF6 serine and arginine rich splicing factor 6 ISO mRNA:decreased expression:colon mucosa (human) RGD PMID:9865741 RGD:11039405 NCBI chr 2:20,340,163...20,345,873
Ensembl chr 2:20,342,681...20,346,122 		JBrowse link
G STAT1 signal transducer and activator of transcription 1 ISO DNA:SNPs:introns: (rs2280232, rs4327257) (human) RGD PMID:22121102 RGD:153323313 NCBI chr10:76,492,859...76,537,689
Ensembl chr10:76,492,533...76,533,393 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 treatment ISO human cells in mouse model
DNA:SNPs:introns: (rs12949918, rs6503695) (human) 		RGD PMID:22121102 PMID:32504672 RGD:125097526 RGD:153323313 NCBI chr16:63,877,884...63,957,894
Ensembl chr16:63,922,862...63,957,984 		JBrowse link
G STAT5A signal transducer and activator of transcription 5A ISO DNA:SNP:intron: (rs7217728) (human) RGD PMID:22121102 RGD:153323313 NCBI chr16:63,959,265...63,986,627
Ensembl chr16:63,960,515...63,985,026 		JBrowse link
G STAT6 signal transducer and activator of transcription 6 ISO DNA:SNP:3' utr: (rs324015) (human) RGD PMID:22121102 RGD:153323313 NCBI chr11:53,005,378...53,020,899
Ensembl chr11:53,006,145...53,021,203 		JBrowse link
G TERT telomerase reverse transcriptase treatment ISO RGD PMID:19903903 RGD:11038656 NCBI chr 4:1,082,894...1,119,373
Ensembl chr 4:1,083,384...1,117,468 		JBrowse link
G TET2 tet methylcytosine dioxygenase 2 ISO mRNA:increased expression:colorectum, Cancer Stem-like Cells (human) RGD PMID:31057717 RGD:150429686 NCBI chr 7:53,193,824...53,326,813
Ensembl chr 7:53,193,941...53,326,942 		JBrowse link
G TGFB1 transforming growth factor beta 1 disease_progression ISO RGD PMID:9019169 RGD:13432089 NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365 		JBrowse link
G TP73 tumor protein p73 ISO mRNA:increased expression:colon (human) RGD PMID:30420492 RGD:151347580 NCBI chr20:127,958,002...128,035,792
Ensembl chr20:127,958,809...128,013,691 		JBrowse link
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 ameliorates
severity 		ISO human cell line in a mouse model RGD PMID:28856538 PMID:29296225 RGD:151665195 RGD:151665199 NCBI chr 8:97,104,325...97,257,317
Ensembl chr 8:97,103,220...97,257,440 		JBrowse link
G VEGFC vascular endothelial growth factor C ISO mRNA:increased expression:colon RGD PMID:18424890 RGD:2315488 NCBI chr 7:122,772,539...122,893,486
Ensembl chr 7:122,772,182...122,893,512 		JBrowse link
colon cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACER3 alkaline ceramidase 3 severity ISO associated with colitis RGD PMID:26938296 RGD:35673322 NCBI chr 1:68,072,323...68,228,036
Ensembl chr 1:68,072,544...68,227,736 		JBrowse link
G ACTR1A actin related protein 1A ISO RGD PMID:26422100 RGD:13831341 NCBI chr 9:95,507,685...95,531,015
Ensembl chr 9:95,506,675...95,530,984 		JBrowse link
G ACVR2A activin A receptor type 2A ISO DNA:mutation:polyadenine tract RGD PMID:14988818 RGD:2301065 NCBI chr10:33,223,902...33,311,257
Ensembl chr10:33,224,099...33,307,720 		JBrowse link
G ADA adenosine deaminase susceptibility ISO DNA:polymorphisms,haplotypes: :
protein:increased activity:colon 		RGD PMID:15820509 PMID:20590444 RGD:152995263 RGD:152995289 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G AKT1 AKT serine/threonine kinase 1 treatment
severity 		ISO mRNA:increased expression:colon (human)
human cells in mouse model 		RGD PMID:31932471 PMID:33360052 RGD:127229954 RGD:152995462 NCBI chr24:82,704,087...82,730,711
Ensembl chr24:82,704,068...82,727,698 		JBrowse link
G AKT3 AKT serine/threonine kinase 3 treatment ISO RGD PMID:20811704 RGD:13209140 NCBI chr25:80,509,701...80,878,792
Ensembl chr25:80,515,168...80,816,018 		JBrowse link
G APAF1 apoptotic peptidase activating factor 1 treatment ISO RGD PMID:22369161 RGD:13703116 NCBI chr11:93,942,137...94,024,728
Ensembl chr11:93,942,103...94,024,457 		JBrowse link
G APC APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Colon cancer ClinVar PMID:22675565 PMID:25741868 PMID:26467025 PMID:26692440 PMID:26837502 More... NCBI chr23:15,992,437...16,135,117
Ensembl chr23:16,042,287...16,137,067 		JBrowse link
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISO mRNA, protein:decreased expression:colon RGD PMID:12020819 RGD:625559 NCBI chr11:7,696,571...7,700,424
Ensembl chr11:7,696,259...7,700,643 		JBrowse link
G ARID1A AT-rich interaction domain 1A treatment ISO human cells in mouse model RGD PMID:26069190 RGD:11072938 NCBI chr20:105,981,549...106,066,093
Ensembl chr20:105,981,290...106,065,672 		JBrowse link
G ATG101 autophagy related 101 disease_progression ISO RGD PMID:34315829 RGD:153350092 NCBI chr11:48,243,200...48,251,129
Ensembl chr11:48,243,216...48,251,371 		JBrowse link
G ATM ATM serine/threonine kinase ISO ClinVar Annotator: match by term: Colon cancer ClinVar NCBI chr 1:99,653,208...99,786,889
Ensembl chr 1:99,653,139...99,791,520 		JBrowse link
G ATR ATR serine/threonine kinase disease_progression ISO DNA:mutations: : RGD PMID:17879369 RGD:150340676 NCBI chr15:48,048,785...48,173,120
Ensembl chr15:48,048,882...48,173,137 		JBrowse link
G AURKA aurora kinase A ISO ClinVar Annotator: match by term: Colon cancer, susceptibility to ClinVar PMID:9771714 PMID:10511710 PMID:12881723 PMID:25741868 NCBI chr 2:7,730,060...7,753,167
Ensembl chr 2:7,734,128...7,752,395 		JBrowse link
G AXIN1 axin 1 treatment ISO RGD PMID:28032729 RGD:150530464 NCBI chr 5:233,520...295,134
Ensembl chr 5:234,060...290,575 		JBrowse link
G AZGP1 alpha-2-glycoprotein 1, zinc-binding severity ISO protein:increased expression:colon,serum RGD PMID:25561225 RGD:153350136 NCBI chr28:13,104,262...13,120,329
Ensembl chr28:13,104,323...13,120,363 		JBrowse link
G BAD BCL2 associated agonist of cell death treatment ISO RGD PMID:21214291 RGD:10053668 NCBI chr 1:9,949,717...9,964,433
Ensembl chr 1:9,949,762...9,964,432 		JBrowse link
G BCL2 BCL2 apoptosis regulator treatment ISO RGD PMID:21214291 RGD:10053668 NCBI chr18:16,440,560...16,643,187
Ensembl chr18:16,441,733...16,637,895 		JBrowse link
G BIK BCL2 interacting killer treatment ISO RGD PMID:17636408 RGD:14394819 NCBI chr19:25,632,837...25,658,951
Ensembl chr19:25,652,945...25,658,541 		JBrowse link
G BIRC3 baculoviral IAP repeat containing 3 disease_progression ISO protein:increased expression:colon (human) RGD PMID:22751125 RGD:152998979 NCBI chr 1:93,692,239...93,711,905 JBrowse link
G BRCA1 BRCA1 DNA repair associated disease_progression
susceptibility 		ISO DNA:mutation RGD PMID:7907678 PMID:33583275 RGD:126925959 RGD:1599497 NCBI chr16:63,162,827...63,243,928 JBrowse link
G BRD4 bromodomain containing 4 ISO RGD PMID:22120039 RGD:9586351 NCBI chr 6:13,836,332...13,883,459
Ensembl chr 6:13,836,324...13,873,877 		JBrowse link
G CALR calreticulin treatment
ameliorates 		ISO human cell line and recombinant gene in a mouse model
protein:increased expression:colon (human) 		RGD PMID:17187072 PMID:19256344 PMID:19881547 PMID:20480531 PMID:29573475 RGD:150521684 RGD:150521692 RGD:150521693 RGD:150521694 RGD:150521701 NCBI chr 6:11,618,691...11,624,299
Ensembl chr 6:11,618,396...11,623,792 		JBrowse link
G CASP3 caspase 3 disease_progression ISO protein:decreased expression:colon RGD PMID:17805550 PMID:23979166 RGD:13209142 RGD:13209143 NCBI chr 7:130,589,592...130,610,845
Ensembl chr 7:130,591,166...130,610,899 		JBrowse link
G CASP7 caspase 7 disease_progression ISO RGD PMID:23979166 RGD:13209143 NCBI chr 9:106,558,291...106,607,662
Ensembl chr 9:106,559,445...106,607,663 		JBrowse link
G CCL2 C-C motif chemokine ligand 2 ISO RGD PMID:21268133 RGD:5135051 NCBI chr16:27,763,354...27,765,437
Ensembl chr16:27,763,555...27,765,416 		JBrowse link
G CCND2 cyclin D2 ISO mRNA:increased expression:colon RGD PMID:15059925 RGD:2289181 NCBI chr11:4,307,419...4,339,003
Ensembl chr11:4,307,401...4,333,661 		JBrowse link
G CCNG2 cyclin G2 ISO mRNA:decreased expression:colon,rectum (human) RGD PMID:27982046 RGD:151361200 NCBI chr 7:25,657,548...25,667,464
Ensembl chr 7:25,657,441...25,666,254 		JBrowse link
G CD274 CD274 molecule treatment ISO RGD PMID:28424330 RGD:41410791 NCBI chr12:74,038,844...74,060,662
Ensembl chr12:74,041,767...74,056,806 		JBrowse link
G CHAF1A chromatin assembly factor 1 subunit A disease_progression ISO mRNA,protein:increased expression:colonic mucosa: RGD PMID:24845563 RGD:9587457 NCBI chr 6:4,134,405...4,174,281
Ensembl chr 6:4,137,738...4,174,988 		JBrowse link
G CHEK2 checkpoint kinase 2 ISO ClinVar Annotator: match by term: Colon cancer ClinVar PMID:15095295 PMID:21244692 PMID:22114986 PMID:22419737 PMID:22862163 More... NCBI chr19:11,567,529...11,621,180
Ensembl chr19:11,567,528...11,604,792 		JBrowse link
G CHKA choline kinase alpha ISO mRNA, protein:increased expression:colon (rat) RGD PMID:10622531 RGD:10401869 NCBI chr 1:6,411,606...6,482,508 JBrowse link
G CHUK component of inhibitor of nuclear factor kappa B kinase complex ISO protein:increased expression:colon (human) RGD PMID:16774932 RGD:153305944 NCBI chr 9:93,219,374...93,263,077
Ensembl chr 9:93,219,383...93,262,700 		JBrowse link
G COL6A3 collagen type VI alpha 3 chain ISO protein:increased expression:serum (human) RGD PMID:32245981 RGD:401900121 NCBI chr10:123,326,337...123,418,836
Ensembl chr10:123,327,102...123,400,114 		JBrowse link
G CRIPTO cripto, EGF-CFC family member treatment ISO RGD PMID:15173016 RGD:11561894 NCBI chr22:7,993,724...8,000,935
Ensembl chr22:7,997,383...8,000,629 		JBrowse link
G CRP C-reactive protein ISO protein:increased expression:serum: RGD PMID:23008118 RGD:6903278 NCBI chr20:4,232,262...4,235,826
Ensembl chr20:4,232,913...4,235,377 		JBrowse link
G CSNK1D casein kinase 1 delta ISO mRNA:increased expression:colon RGD PMID:33754069 RGD:597811020 NCBI chr16:74,157,875...74,192,142
Ensembl chr16:74,160,648...74,192,108 		JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 susceptibility ISO mRNA:increased expression:colon (human)
DNA:SNPs:introns: (rs4809960, rs6022999) (human)
DNA:SNPs:multiple (human)
DNA:SNP:intron: IVS4-66T>G, (rs4809958) (human) 		RGD PMID:16180015 PMID:19706847 PMID:28811712 PMID:31740231 RGD:151361183 RGD:151665174 RGD:151665177 RGD:151665338 NCBI chr 2:9,868,794...9,889,510
Ensembl chr 2:9,868,678...9,885,884 		JBrowse link
G CYP2E1 cytochrome P450 family 2 subfamily E member 1 treatment ISO RGD PMID:30720227 RGD:14700924 NCBI chr26:53,390,054...53,403,309
Ensembl chr26:53,390,089...53,404,211 		JBrowse link
G EFTUD2 elongation factor Tu GTP binding domain containing 2 ameliorates ISO associated with colitis; RGD PMID:31278373 RGD:155791667 NCBI chr16:61,505,796...61,549,720
Ensembl chr16:61,505,825...61,551,890 		JBrowse link
G ESR2 estrogen receptor 2 ISO RGD PMID:19141699 RGD:8694174 NCBI chr24:41,426,333...41,513,802
Ensembl chr24:41,447,224...41,512,486 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit disease_progression ISO RGD PMID:19773751 RGD:126781702 NCBI chr21:117,380,518...117,515,224
Ensembl chr21:117,380,361...117,421,573 		JBrowse link
G FGFR4 fibroblast growth factor receptor 4 treatment ISO human cells in mouse model RGD PMID:17599042 RGD:150520062 NCBI chr23:79,095,031...79,106,018
Ensembl chr23:79,097,429...79,105,456 		JBrowse link
G GPX1 glutathione peroxidase 1 treatment ISO associated with Inflammation
mRNA, protein:increased expression:colon (human) 		RGD PMID:21868509 PMID:28045589 RGD:152995480 RGD:152995496 NCBI chr22:10,754,976...10,756,617 JBrowse link
G GPX2 glutathione peroxidase 2 treatment ISO associated with Inflammation RGD PMID:28045589 RGD:152995480 NCBI chr24:42,151,205...42,155,335 JBrowse link
G GPX3 glutathione peroxidase 3 disease_progression ISO associated with Experimental Colitis RGD PMID:23221387 RGD:151665510 NCBI chr23:53,576,950...53,585,321 JBrowse link
G GPX4 glutathione peroxidase 4 disease_progression ISO mRNA, protein:increased expression:colon (human) RGD PMID:21868509 RGD:152995496 NCBI chr 6:873,867...876,225 JBrowse link
G GSK3B glycogen synthase kinase 3 beta treatment ISO RGD PMID:22561258 RGD:10045586 NCBI chr22:60,732,449...61,002,735
Ensembl chr22:60,733,465...60,997,239 		JBrowse link
G HS3ST2 heparan sulfate-glucosamine 3-sulfotransferase 2 ISO DNA:hypermethylation:promoter (human) RGD PMID:12527896 RGD:2317633 NCBI chr 5:20,511,329...20,612,114
Ensembl chr 5:20,511,762...20,611,336 		JBrowse link
G HSP90AA1 heat shock protein 90 alpha family class A member 1 ISO protein:increased expression:colon (human) RGD PMID:16774932 RGD:153305944 NCBI chr24:80,016,352...80,019,130
Ensembl chr24:80,016,232...80,019,120 		JBrowse link
G HTRA1 HtrA serine peptidase 1 disease_progression ISO DNA:SNP:cds: (rs1049331) (human) RGD PMID:32218415 RGD:152985527 NCBI chr 9:115,197,543...115,250,092
Ensembl chr 9:115,197,566...115,253,919 		JBrowse link
G IKBKB inhibitor of nuclear factor kappa B kinase subunit beta ISO associated with Obesity;protein:increased expression:large intestine mucosa RGD PMID:20143392 RGD:7495781 NCBI chr 8:40,267,532...40,325,282
Ensembl chr 8:40,268,079...40,326,381 		JBrowse link
G IL10 interleukin 10 no_association ISO DNA:SNP: :rs1800896 (human)
DNA:SNP:promoter:-592C>A (rs1800872) (human) 		RGD PMID:27468578 RGD:11534627 NCBI chr25:22,590,389...22,595,877
Ensembl chr25:22,590,962...22,594,836 		JBrowse link
G IL33 interleukin 33 treatment ISO associated with colitis; RGD PMID:31407335 RGD:39939040 NCBI chr12:73,235,585...73,283,665
Ensembl chr12:73,237,406...73,252,436 		JBrowse link
G IL7R interleukin 7 receptor disease_progression ISO DNA:deletion: : RGD PMID:29755661 RGD:126779581 NCBI chr 4:34,701,724...34,724,241
Ensembl chr 4:34,701,531...34,721,361 		JBrowse link
G JAK2 Janus kinase 2 treatment ISO RGD PMID:33360052 RGD:127229954 NCBI chr12:74,421,243...74,566,766
Ensembl chr12:74,421,016...74,566,710 		JBrowse link
G JUNB JunB proto-oncogene, AP-1 transcription factor subunit ISO RNA:decreased expression:colon (human) RGD PMID:11751871 RGD:151347667 NCBI chr 6:11,479,108...11,480,942
Ensembl chr 6:11,479,407...11,480,450 		JBrowse link
G KDM3A lysine demethylase 3A severity ISO human gene in a mouse model RGD PMID:19858293 RGD:9590225 NCBI chr14:20,668,215...20,721,854
Ensembl chr14:20,668,821...20,720,759 		JBrowse link
G KDM5C lysine demethylase 5C ISO mRNA:increased expression:colon (human) RGD PMID:33042830 RGD:151361176 NCBI chr  X:49,306,472...49,356,151
Ensembl chr  X:49,321,173...49,356,100 		JBrowse link
G LALBA lactalbumin alpha onset ISO RGD PMID:25036966 RGD:38599174 NCBI chr11:44,816,340...44,819,407
Ensembl chr11:44,816,613...44,818,673 		JBrowse link
G LCN2 lipocalin 2 treatment ISO RGD PMID:20043115 RGD:2316492 NCBI chr12:9,976,278...9,981,087
Ensembl chr12:9,976,614...9,980,870 		JBrowse link
G LGALS3 galectin 3 treatment ISO RGD PMID:28032729 RGD:150530464 NCBI chr24:32,311,343...32,328,335
Ensembl chr24:32,311,271...32,328,339 		JBrowse link
G LIF LIF interleukin 6 family cytokine ameliorates ISO human cells in mouse model RGD PMID:29899555 RGD:151356919 NCBI chr19:13,121,261...13,127,663
Ensembl chr19:13,121,297...13,127,679 		JBrowse link
G LOC103223312 casein kinase I ISO mRNA:increased expression:colon RGD PMID:33754069 RGD:597811020 NCBI chr19:20,992,927...21,025,866
Ensembl chr19:20,998,009...21,022,576 		JBrowse link
G LOC103230356 uncharacterized LOC103230356 ISO RNA:increased expression:colon (human) RGD PMID:28710032 RGD:153344627 NCBI chr25:29,230,358...29,380,617
Ensembl chr25:29,233,558...29,379,922 		JBrowse link
G LOC103232241 cysteinyl leukotriene receptor 1 ISO associated with Experimental Colitis RGD PMID:28410235 RGD:40903055 NCBI chr  X:67,218,777...67,300,655
Ensembl chr  X:67,220,048...67,221,061 		JBrowse link
G LOC103233229 cadherin-1 ISO ClinVar Annotator: match by term: Malignant tumor of colon ClinVar PMID:15235021 PMID:16924464 PMID:17545690 PMID:19268661 PMID:20233471 More... NCBI chr 5:58,578,244...58,679,677
Ensembl chr 5:58,578,146...58,679,541 		JBrowse link
G LOC103242767 C-C motif chemokine 3 ISO RGD PMID:21268133 RGD:5135051 NCBI chr16:29,887,799...29,897,664
Ensembl chr16:29,887,883...29,897,544 		JBrowse link
G LOC103246803 mismatch repair endonuclease PMS2 ISO ClinVar Annotator: match by term: Colon cancer ClinVar PMID:21376568 PMID:24362816 PMID:25741868 PMID:28492532 PMID:30376427 More... NCBI chr28:15,174,359...15,209,962
Ensembl chr28:15,172,100...15,209,852 		JBrowse link
G LRP1B LDL receptor related protein 1B ISO human cells in a mouse moel RGD PMID:28408316 RGD:150429777 NCBI chr10:25,611,400...27,511,903
Ensembl chr10:25,616,590...26,609,111 		JBrowse link
G MAP2K3 mitogen-activated protein kinase kinase 3 ISO RGD PMID:24233520 RGD:7495808 NCBI chr16:19,396,377...19,427,617
Ensembl chr16:19,396,452...19,427,652 		JBrowse link
G MAP2K7 mitogen-activated protein kinase kinase 7 ISO mRNA:splice variant:exon 2: (human) RGD PMID:32601196 RGD:155230826 NCBI chr 6:7,355,387...7,365,944
Ensembl chr 6:7,355,434...7,364,398 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 treatment ISO RGD PMID:19876598 RGD:401976467 NCBI chr19:4,246,144...4,352,648
Ensembl chr19:4,246,122...4,353,325 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 susceptibility ISO DNA:SNP:intron: (rs10807156) (human)
DNA:SNP:intron: (rs851016) (human) 		RGD PMID:23027623 PMID:23859041 RGD:13217411 RGD:150573807 NCBI chr17:36,012,164...36,095,542
Ensembl chr17:36,014,454...36,095,138 		JBrowse link
G MCL1 MCL1 apoptosis regulator, BCL2 family member ameliorates ISO human cells in mouse model RGD PMID:29899555 RGD:151356919
G MKI67 marker of proliferation Ki-67 treatment ISO RGD PMID:33360052 RGD:127229954 NCBI chr 9:120,697,183...120,727,039
Ensembl chr 9:120,698,834...120,726,866 		JBrowse link
G MLH1 mutL homolog 1 disease_progression ISO ClinVar Annotator: match by term: Colon cancer | ClinVar Annotator: match by term: Malignant tumor of colon RGD
ClinVar		 PMID:8566964 PMID:8574961 PMID:8592341 PMID:08808596 PMID:9311737 More... RGD:126790577 NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393 		JBrowse link
G MMP3 matrix metallopeptidase 3 treatment ISO RGD PMID:20043115 RGD:2316492 NCBI chr 1:94,216,156...94,224,437
Ensembl chr 1:94,216,173...94,224,264 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease susceptibility ISO DNA:SNP:3'utr: (rs2155209) (human) RGD PMID:26735576 RGD:151361212 NCBI chr 1:85,615,448...85,694,247
Ensembl chr 1:85,610,819...85,694,269 		JBrowse link
G MSH2 mutS homolog 2 no_association
disease_progression 		ISO DNA:SNP:intron:IVS10+12G>A (human)
ClinVar Annotator: match by term: Colon cancer
DNA, mRNA:loss of heterogeneity, increased expression: :colon 		RGD
ClinVar		 PMID:25741868 PMID:28411881 PMID:28492532 PMID:29715107 PMID:33357406 RGD:126790554 RGD:126790577 NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819 		JBrowse link
G MTOR mechanistic target of rapamycin kinase treatment ISO RGD PMID:33360052 RGD:127229954 NCBI chr20:120,522,667...120,678,988
Ensembl chr20:120,525,737...120,679,020 		JBrowse link
G MTUS1 microtubule associated scaffold protein 1 ISO mRNA, protein:decreased expression:colon (human) RGD PMID:19956880 RGD:2317016 NCBI chr 8:15,739,220...15,899,834
Ensembl chr 8:15,741,294...15,853,293 		JBrowse link
G MUC2 mucin 2, oligomeric mucus/gel-forming ISO mRNA:decreased expression:colon
protein:decreased expression:colon 		RGD PMID:17847023 PMID:20459814 RGD:7349368 RGD:7349371 NCBI chr 1:893,554...926,854 JBrowse link
G MUTYH mutY DNA glycosylase ISO ClinVar Annotator: match by term: Colon cancer | ClinVar Annotator: match by term: Malignant tumor of colon ClinVar PMID:2914711 PMID:9536098 PMID:11818965 PMID:12606733 PMID:12853198 More... NCBI chr20:87,449,480...87,462,329
Ensembl chr20:87,448,986...87,462,265 		JBrowse link
G MYCBP2 MYC binding protein 2 disease_progression ISO RGD PMID:30318507 RGD:596938165 NCBI chr 3:56,128,691...56,412,854
Ensembl chr 3:56,128,428...56,412,923 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor ameliorates ISO RGD PMID:23184679 RGD:150520021 NCBI chr15:1,276,804...1,281,811
Ensembl chr15:1,276,798...1,281,166 		JBrowse link
G NANOG Nanog homeobox treatment ISO RGD PMID:22641368 RGD:7240527 NCBI chr11:7,813,309...7,820,009 JBrowse link
G NCOA6 nuclear receptor coactivator 6 ISO DNA:amplification:cds (human) RGD PMID:10567404 RGD:9590137 NCBI chr 2:39,013,364...39,129,723
Ensembl chr 2:39,013,232...39,129,658 		JBrowse link
G NF1 neurofibromin 1 ISO mRNA:increased expression:colon (human) RGD PMID:15840687 RGD:150429699 NCBI chr16:24,550,983...24,836,311
Ensembl chr16:24,550,977...24,836,307 		JBrowse link
G NQO1 NAD(P)H quinone dehydrogenase 1 ISO RGD PMID:19424637 RGD:5133247 NCBI chr 5:57,676,547...57,695,434
Ensembl chr 5:57,675,981...57,716,599 		JBrowse link
G PIK3R2 phosphoinositide-3-kinase regulatory subunit 2 ISO RGD PMID:18663744 RGD:13432043 NCBI chr 6:16,620,673...16,637,511
Ensembl chr 6:16,621,606...16,636,937 		JBrowse link
G PIK3R5 phosphoinositide-3-kinase regulatory subunit 5 ISO DNA:hypermethylation RGD PMID:15123805 RGD:13432047 NCBI chr16:8,235,891...8,322,347
Ensembl chr16:8,234,962...8,322,320 		JBrowse link
G PKHD1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin ISO ClinVar Annotator: match by term: Malignant tumor of colon ClinVar PMID:12846734 PMID:14741187 PMID:15805161 PMID:21493627 PMID:25646624 More... NCBI chr17:20,411,746...20,873,601 JBrowse link
G PLCG1 phospholipase C gamma 1 treatment ISO RGD PMID:7812955 RGD:151356942 NCBI chr 2:22,599,547...22,638,394 JBrowse link
G PLK4 polo like kinase 4 ISO protein:increased expression:colon RGD PMID:26439168 RGD:11075990 NCBI chr 7:75,005,468...75,023,768
Ensembl chr 7:75,006,431...75,023,730 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit ISO ClinVar Annotator: match by term: Colon cancer ClinVar PMID:25741868 PMID:28492532 NCBI chr11:127,966,879...128,030,442
Ensembl chr11:127,965,896...128,030,292 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma ISO DNA:frameshift mutation:c.472delA (human) RGD PMID:10394368 RGD:1601444 NCBI chr22:48,262,743...48,407,415
Ensembl chr22:48,275,600...48,407,418 		JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 ISO RGD PMID:20622004 RGD:5685669 NCBI chr 4:39,516,307...39,553,627 JBrowse link
G PTEN phosphatase and tensin homolog ISO mRNA:decreased expression:colon (human) RGD PMID:21806946 RGD:12859043 NCBI chr 9:81,308,058...81,412,386
Ensembl chr 9:81,309,099...81,409,146 		JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO mRNA:decreased expression:colon mucosa (rat) RGD PMID:15247185 RGD:9850265 NCBI chr20:62,093,830...62,293,360
Ensembl chr20:62,095,458...62,174,959 		JBrowse link
G PTGIS prostaglandin I2 synthase exacerbates ISO RGD PMID:26611322 RGD:11536046 NCBI chr 2:14,420,318...14,484,667
Ensembl chr 2:14,441,983...14,488,264 		JBrowse link
G PTPN13 protein tyrosine phosphatase non-receptor type 13 treatment ISO RGD PMID:29899829 RGD:152975627 NCBI chr 7:34,974,028...35,200,214
Ensembl chr 7:34,974,082...35,200,293 		JBrowse link
G PTPRT protein tyrosine phosphatase receptor type T exacerbates ISO RGD PMID:20133777 PMID:27447856 RGD:150520184 RGD:150520192 NCBI chr 2:20,613,352...21,720,417 JBrowse link
G RAD52 RAD52 homolog, DNA repair protein susceptibility ISO DNA:SNPs:3'utr: (rs1051669, rs11571475) (human) RGD PMID:26735576 RGD:151361212 NCBI chr11:893,984...989,119
Ensembl chr11:895,292...927,430 		JBrowse link
G RICTOR RPTOR independent companion of MTOR complex 2 severity ISO mRNA:increased expression:colon (human)
human cells in mouse model
protein:increased expression:colon (human) 		RGD PMID:20226010 PMID:24244675 PMID:31932471 RGD:152995458 RGD:152995462 RGD:152995494 NCBI chr 4:37,758,531...37,885,323
Ensembl chr 4:37,762,901...37,873,766 		JBrowse link
G RNASET2 ribonuclease T2 ISO RGD PMID:32197460 RGD:153002804 NCBI chr13:94,670,376...94,702,585
Ensembl chr13:94,668,580...94,702,587 		JBrowse link
G RNF43 ring finger protein 43 disease_progression ISO mRNA:increased expression:colon (human) RGD PMID:26350900 RGD:11053240 NCBI chr16:34,981,126...35,046,478
Ensembl chr16:34,980,922...35,045,107 		JBrowse link
G RPS6KB1 ribosomal protein S6 kinase B1 treatment ISO RGD PMID:33360052 RGD:127229954 NCBI chr16:33,498,098...33,556,553
Ensembl chr16:33,497,392...33,556,453 		JBrowse link
G SLC7A5 solute carrier family 7 member 5 treatment ISO RGD PMID:19900191 RGD:151361295 NCBI chr 5:73,229,953...73,269,801
Ensembl chr 5:73,229,951...73,269,754 		JBrowse link
G SLCO1B3 solute carrier organic anion transporter family member 1B3 disease_progression ISO mRNA:increased expression:colon (human) RGD PMID:25625007 RGD:152995427 NCBI chr11:20,637,429...20,760,577
Ensembl chr11:20,648,582...20,761,161 		JBrowse link
G SMAD2 SMAD family member 2 treatment ISO RGD PMID:33360052 RGD:127229954 NCBI chr18:33,017,138...33,105,320
Ensembl chr18:33,017,492...33,104,606 		JBrowse link
G SMAD4 SMAD family member 4 treatment
severity 		ISO mRNA:decreased expression:colon (human) RGD PMID:31932471 PMID:33360052 RGD:127229954 RGD:152995462 NCBI chr18:29,894,157...29,951,445
Ensembl chr18:29,897,621...29,934,478 		JBrowse link
G SMO smoothened, frizzled class receptor ISO protein:increased expression:colon RGD PMID:23098507 RGD:150340555 NCBI chr21:97,788,955...97,814,549
Ensembl chr21:97,788,624...97,814,709 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 ameliorates ISO RGD PMID:19469017 RGD:150573701 NCBI chr 5:10,731,866...10,733,745
Ensembl chr 5:10,732,350...10,732,991 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase disease_progression ISO DNA:nonsense mutation
ClinVar Annotator: match by term: Colon cancer, advanced 		RGD
ClinVar		 PMID:7678609 PMID:9988270 RGD:150521542 RGD:1601371 NCBI chr 2:26,344,480...26,367,448
Ensembl chr 2:26,343,450...26,367,776 		JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 ISO protein:increased expression:colon (human) RGD PMID:17310252 RGD:11038730 NCBI chr16:35,392,573...35,396,815
Ensembl chr16:35,392,873...35,394,982 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 treatment
ameliorates 		ISO human cells in mouse model RGD PMID:29899555 PMID:33360052 RGD:127229954 RGD:151356919 NCBI chr16:63,877,884...63,957,894
Ensembl chr16:63,922,862...63,957,984 		JBrowse link
G TGFB1 transforming growth factor beta 1 treatment ISO RGD PMID:33360052 RGD:127229954 NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365 		JBrowse link
G TGFB3 transforming growth factor beta 3 disease_progression ISO RGD PMID:18360718 RGD:13432091 NCBI chr24:53,203,593...53,227,483
Ensembl chr24:53,203,301...53,227,325 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 ISO DNA:mutation:polyadenine tract RGD PMID:14988818 RGD:2301065 NCBI chr15:75,112,903...75,200,263
Ensembl chr15:75,112,561...75,197,711 		JBrowse link
G TLE5 TLE family member 5, transcriptional modulator ISO mRNA:decreased expression:colon RGD PMID:33754069 RGD:597811020 NCBI chr 6:2,822,814...2,832,625 JBrowse link
G TNFAIP3 TNF alpha induced protein 3 treatment ISO protein:decreased expression:colon (human)
mRNA,protein:increased expression:colon (human)
associated with Experimental Colitis 		RGD PMID:24099634 PMID:27991929 RGD:151347529 RGD:151347624 NCBI chr13:35,537,103...35,553,396
Ensembl chr13:35,537,102...35,549,197 		JBrowse link
G TNFRSF10A TNF receptor superfamily member 10a disease_progression ISO mRNA:increased expression:colon RGD PMID:20428773 RGD:2325778 NCBI chr 8:21,318,987...21,351,641
Ensembl chr 8:21,315,149...21,351,673 		JBrowse link
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 exacerbates ISO mRNA:increased expression:colon (human) RGD PMID:29441938 RGD:151665201 NCBI chr 8:97,104,325...97,257,317
Ensembl chr 8:97,103,220...97,257,440 		JBrowse link
G VEGFA vascular endothelial growth factor A ISO RGD PMID:21268133 RGD:5135051 NCBI chr17:28,377,959...28,394,508 JBrowse link
G WNT5A Wnt family member 5A treatment ISO RGD PMID:28032729 RGD:150530464 NCBI chr22:16,809,454...16,836,815
Ensembl chr22:16,809,451...16,825,048 		JBrowse link
G XRCC2 X-ray repair cross complementing 2 ISO ClinVar Annotator: match by term: Colon cancer ClinVar PMID:23054243 PMID:25637381 PMID:25741868 PMID:27233470 PMID:28492532 More... NCBI chr21:120,795,188...120,827,737
Ensembl chr21:120,795,212...120,827,706 		JBrowse link
colon carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:17611497 PMID:18954143 PMID:21793738 PMID:23237847 PMID:25741868 More... NCBI chr24:82,704,087...82,730,711
Ensembl chr24:82,704,068...82,727,698 		JBrowse link
G AOPEP aminopeptidase O (putative) ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:25058500 PMID:27165003 NCBI chr12:108,007,895...108,360,361
Ensembl chr12:108,171,743...108,360,041 		JBrowse link
G APC APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma 		ClinVar PMID:1316610 PMID:1324223 PMID:1338764 PMID:1338904 PMID:1528264 More... NCBI chr23:15,992,437...16,135,117
Ensembl chr23:16,042,287...16,137,067 		JBrowse link
G ATM ATM serine/threonine kinase ISO ClinVar Annotator: match by term: Carcinoma of colon
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma 		ClinVar PMID:8845835 PMID:9792409 PMID:9887333 PMID:10425038 PMID:10817650 More... NCBI chr 1:99,653,208...99,786,889
Ensembl chr 1:99,653,139...99,791,520 		JBrowse link
G AXIN2 axin 2 ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:11017067 PMID:15042511 PMID:21416598 PMID:25741868 PMID:28492532 NCBI chr16:55,874,043...55,906,739
Ensembl chr16:55,874,072...55,907,281 		JBrowse link
G BARD1 BRCA1 associated RING domain 1 ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:19197335 PMID:20077502 PMID:25741868 PMID:26350354 PMID:26467025 More... NCBI chr10:100,539,827...100,627,718
Ensembl chr10:100,539,527...100,627,675 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:9020077 PMID:9453486 PMID:9531611 PMID:10984511 NCBI chr 6:42,186,028...42,193,105 JBrowse link
G BCL10 BCL10 immune signaling adaptor ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:9989495 NCBI chr20:48,073,489...48,084,635
Ensembl chr20:48,073,800...48,085,136 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:12417513 PMID:14526373 PMID:15235019 PMID:18823382 PMID:23399955 More... NCBI chr 9:44,944,463...45,108,832
Ensembl chr 9:44,941,460...45,027,275 		JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase treatment ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma RGD
ClinVar		 PMID:12068308 PMID:12198537 PMID:12447372 PMID:12619120 PMID:12644542 More... RGD:11567267 NCBI chr21:109,495,525...109,690,261 JBrowse link
G BRCA1 BRCA1 DNA repair associated ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:25741868 PMID:26295337 PMID:26467025 PMID:28492532 PMID:31911673 More... NCBI chr16:63,162,827...63,243,928 JBrowse link
G BRCA2 BRCA2 DNA repair associated ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:11030418 PMID:12491487 PMID:15744044 PMID:15937982 PMID:15983021 More... NCBI chr 3:11,070,086...11,155,257
Ensembl chr 3:11,071,682...11,155,213 		JBrowse link
G BRIP1 BRCA1 interacting DNA helicase 1 ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:16116423 PMID:16280053 PMID:17033622 PMID:18483852 PMID:21964575 More... NCBI chr16:32,909,226...33,085,551
Ensembl chr16:32,910,693...33,082,587 		JBrowse link
G BUB1 BUB1 mitotic checkpoint serine/threonine kinase ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:9521327 NCBI chr14:13,647,342...13,698,061
Ensembl chr14:13,647,462...13,697,932 		JBrowse link
G BUB1B BUB1 mitotic checkpoint serine/threonine kinase B ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:9521327 PMID:24728327 PMID:25741868 PMID:28492532 NCBI chr26:42,769,955...42,855,353
Ensembl chr26:42,792,830...42,855,306 		JBrowse link
G CALR calreticulin treatment ISO human cells and recombinant protein in a mouse model RGD PMID:9858521 RGD:150521687 NCBI chr 6:11,618,691...11,624,299
Ensembl chr 6:11,618,396...11,623,792 		JBrowse link
G CHEK2 checkpoint kinase 2 ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:14612911 PMID:15087378 PMID:17721994 PMID:18571837 PMID:21244692 More... NCBI chr19:11,567,529...11,621,180
Ensembl chr19:11,567,528...11,604,792 		JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein ISO RGD PMID:16391854 RGD:7488899
G CTNNB1 catenin beta 1 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma ClinVar PMID:9065402 PMID:9294210 PMID:10192393 PMID:23033978 PMID:24614104 More... NCBI chr22:2,679,488...2,725,034
Ensembl chr22:2,684,022...2,723,949 		JBrowse link
G CUNH11orf65 chromosome unknown C11orf65 homolog ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:8845835 PMID:17910737 PMID:19404735 PMID:20305132 PMID:21665257 More... NCBI chr 1:99,804,191...99,879,834
Ensembl chr 1:99,804,218...99,827,182 		JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 treatment ISO RGD PMID:30381616 RGD:27095891 NCBI chr 7:24,526,657...24,529,193
Ensembl chr 7:24,526,680...24,529,130 		JBrowse link
G CXCL6 C-X-C motif chemokine ligand 6 disease_progression ISO RGD PMID:18413816 RGD:5135268 NCBI chr 7:22,291,949...22,294,191
Ensembl chr 7:22,292,045...22,294,207 		JBrowse link
G DCC DCC netrin 1 receptor ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:8188295 NCBI chr18:27,437,224...28,623,717
Ensembl chr18:27,442,489...28,212,697 		JBrowse link
G DLC1 DLC1 Rho GTPase activating protein ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:10649492 NCBI chr 8:11,211,230...11,632,278 JBrowse link
G EFNB2 ephrin B2 ameliorates ISO human cells in mouse model RGD PMID:15083195 RGD:153305907 NCBI chr 3:84,904,421...84,949,292
Ensembl chr 3:84,904,435...84,949,465 		JBrowse link
G EP300 E1A binding protein p300 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma ClinVar PMID:10700188 PMID:25741868 NCBI chr19:23,634,132...23,726,095
Ensembl chr19:23,634,571...23,724,979 		JBrowse link
G EPCAM epithelial cell adhesion molecule ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar NCBI chr14:59,815,128...59,832,360
Ensembl chr14:59,815,064...59,832,229 		JBrowse link
G FANCC FA complementation group C ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:25058500 PMID:27165003 NCBI chr12:107,780,087...107,991,828
Ensembl chr12:107,845,135...107,991,237 		JBrowse link
G FANCE FA complementation group E ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:25058500 PMID:25741868 PMID:27165003 PMID:28492532 PMID:34687117 NCBI chr17:36,659,266...36,671,274 JBrowse link
G FGFR3 fibroblast growth factor receptor 3 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma ClinVar PMID:1908846 PMID:7649548 PMID:7670477 PMID:7702086 PMID:7773297 More... NCBI chr27:46,958,444...46,974,032
Ensembl chr27:46,957,254...46,973,392 		JBrowse link
G FLCN folliculin ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:12843323 PMID:15805188 PMID:15852235 PMID:16199547 PMID:18234728 More... NCBI chr16:16,245,840...16,271,465
Ensembl chr16:16,245,715...16,267,698 		JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:25741868 NCBI chr 3:7,412,506...7,608,122
Ensembl chr 3:7,412,172...7,607,967 		JBrowse link
G FLT3LG fms related receptor tyrosine kinase 3 ligand treatment ISO RGD PMID:10842197 RGD:11049504 NCBI chr 6:42,653,820...42,665,017
Ensembl chr 6:42,654,412...42,660,458 		JBrowse link
G FLT4 fms related receptor tyrosine kinase 4 ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:25741868 PMID:28492532 NCBI chr23:82,328,257...82,373,785
Ensembl chr23:82,328,258...82,357,044 		JBrowse link
G FOXA1 forkhead box A1 disease_progression ISO RGD PMID:33296605 RGD:151665748 NCBI chr24:14,397,759...14,403,078
Ensembl chr24:14,396,702...14,403,094 		JBrowse link
G HPGD 15-hydroxyprostaglandin dehydrogenase ISO DNA:::adenoviral delivery of human gene in mouse model of colon cancer RGD PMID:19494278 RGD:5688759 NCBI chr 7:120,589,646...120,620,864
Ensembl chr 7:120,588,462...120,621,016 		JBrowse link
G IGF2R insulin like growth factor 2 receptor ISO protein:increased expression:serum: RGD PMID:29940770 RGD:14985218 NCBI chr13:87,587,717...87,723,795
Ensembl chr13:87,587,907...87,724,116 		JBrowse link
G KDR kinase insert domain receptor treatment ISO ClinVar Annotator: match by term: Carcinoma of colon RGD
ClinVar		 PMID:12415261 RGD:126925192 NCBI chr 7:13,435,059...13,482,236
Ensembl chr 7:13,435,096...13,482,771 		JBrowse link
G KMT2D lysine methyltransferase 2D ISO protein:increased expression:colon RGD PMID:20433758 RGD:150523761 NCBI chr11:45,260,873...45,303,898
Ensembl chr11:45,263,408...45,302,423 		JBrowse link
G LOC103233229 cadherin-1 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:25583476 PMID:25741868 PMID:26467025 PMID:28492532 PMID:30287823 More... NCBI chr 5:58,578,244...58,679,677
Ensembl chr 5:58,578,146...58,679,541 		JBrowse link
G LOC103246803 mismatch repair endonuclease PMS2 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma 		ClinVar PMID:285143 PMID:2402700 PMID:9536098 PMID:9683794 PMID:10037723 More... NCBI chr28:15,174,359...15,209,962
Ensembl chr28:15,172,100...15,209,852 		JBrowse link
G MCC MCC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar NCBI chr23:16,309,574...16,773,736
Ensembl chr23:16,310,968...16,579,343 		JBrowse link
G MHC-DQA1 major histocompatibility complex, class II, DQ alpha 1 susceptibility ISO DNA:polymorphism: :HLA-DQA1*0201 (human) RGD PMID:11972882 RGD:126925990 NCBI chr17:39,422,445...39,428,777
Ensembl chr17:39,420,134...39,428,871 		JBrowse link
G MLH1 mutL homolog 1 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma 		ClinVar PMID:7757073 PMID:8521398 PMID:8571956 PMID:8574961 PMID:8581513 More... NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393 		JBrowse link
G MLH3 mutL homolog 3 ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:11317354 PMID:28492532 PMID:35292633 NCBI chr24:52,231,468...52,266,179 JBrowse link
G MSH2 mutS homolog 2 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma 		ClinVar PMID:187139 PMID:625353 PMID:3258778 PMID:3616036 PMID:6096739 More... NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819 		JBrowse link
G MSH6 mutS homolog 6 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma 		ClinVar PMID:1548301 PMID:3049887 PMID:8838326 PMID:9345684 PMID:9536098 More... NCBI chr14:59,375,602...59,400,252
Ensembl chr14:59,375,691...59,400,174 		JBrowse link
G MUTYH mutY DNA glycosylase ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma 		ClinVar PMID:517270 PMID:2914711 PMID:9536098 PMID:11051386 PMID:11295288 More... NCBI chr20:87,449,480...87,462,329
Ensembl chr20:87,448,986...87,462,265 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor treatment ISO mouse cell line in a mouse model RGD PMID:20823152 RGD:150520170 NCBI chr15:1,276,804...1,281,811
Ensembl chr15:1,276,798...1,281,166 		JBrowse link
G NBN nibrin ISO ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:11325820 PMID:14559852 PMID:15338273 PMID:16474176 PMID:16810201 More... NCBI chr 8:85,017,807...85,069,219
Ensembl chr 8:85,015,752...85,069,028 		JBrowse link
G NRAS NRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:3102434 PMID:18633438 PMID:25741868 NCBI chr20:18,953,273...18,966,002
Ensembl chr20:18,953,883...18,961,931 		JBrowse link
G PALB2 partner and localizer of BRCA2 ISO ClinVar Annotator: match by term: Carcinoma of colon
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma 		ClinVar PMID:3040479 PMID:18053174 PMID:21285249 PMID:21365267 PMID:21618343 More... NCBI chr 5:21,322,952...21,358,363
Ensembl chr 5:21,322,975...21,358,198 		JBrowse link
G PDGFRA platelet derived growth factor receptor alpha ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:24033266 PMID:25741868 PMID:28492532 NCBI chr 7:14,243,291...14,307,373
Ensembl chr 7:14,241,070...14,307,422 		JBrowse link
G PDGFRL platelet derived growth factor receptor like ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:7898930 NCBI chr 8:15,671,827...15,739,396
Ensembl chr 8:15,671,425...15,738,199 		JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma 		ClinVar PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 More... NCBI chr15:10,218,034...10,304,874
Ensembl chr15:10,218,805...10,294,316 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma 		ClinVar PMID:15766587 PMID:16199547 PMID:23230001 PMID:23263490 PMID:23447401 More... NCBI chr11:127,966,879...128,030,442
Ensembl chr11:127,965,896...128,030,292 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma ClinVar PMID:10394368 PMID:25741868 NCBI chr22:48,262,743...48,407,415
Ensembl chr22:48,275,600...48,407,418 		JBrowse link
G PRF1 perforin 1 ISO RGD PMID:22420317 RGD:6482822 NCBI chr 9:60,692,544...60,698,000
Ensembl chr 9:60,692,600...60,698,465 		JBrowse link
G PTEN phosphatase and tensin homolog ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:10555148 PMID:12372056 PMID:21194675 PMID:21659347 PMID:21956414 More... NCBI chr 9:81,308,058...81,412,386
Ensembl chr 9:81,309,099...81,409,146 		JBrowse link
G PTPN12 protein tyrosine phosphatase non-receptor type 12 ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:7509295 NCBI chr21:71,285,917...71,389,645
Ensembl chr21:71,285,736...71,389,926 		JBrowse link
G PTPRJ protein tyrosine phosphatase receptor type J ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:12089527 PMID:25741868 PMID:33116287 NCBI chr 1:17,137,896...17,328,836
Ensembl chr 1:17,135,907...17,328,590 		JBrowse link
G RAD51C RAD51 paralog C ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:16199547 PMID:20400964 PMID:21537932 PMID:21990120 PMID:22538716 More... NCBI chr16:34,666,934...34,708,479
Ensembl chr16:34,666,162...34,708,457 		JBrowse link
G RAD51D RAD51 paralog D ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:25741868 PMID:28492532 NCBI chr16:28,603,326...28,623,120
Ensembl chr16:28,604,500...28,622,845 		JBrowse link
G RAD54B RAD54 homolog B ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:10362364 NCBI chr 8:89,351,203...89,450,047
Ensembl chr 8:89,351,415...89,442,825 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:25058500 PMID:27165003 NCBI chr13:62,400,241...62,586,645
Ensembl chr13:62,399,745...62,586,647 		JBrowse link
G SLCO1B3 solute carrier organic anion transporter family member 1B3 ISO mRNA,protein:increased expression:colon (human) RGD PMID:19074900 RGD:152995419 NCBI chr11:20,637,429...20,760,577
Ensembl chr11:20,648,582...20,761,161 		JBrowse link
G SMAD4 SMAD family member 4 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:9582123 PMID:10398437 PMID:11920286 PMID:15235019 PMID:16152648 More... NCBI chr18:29,894,157...29,951,445
Ensembl chr18:29,897,621...29,934,478 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO protein:increased phosphorylating activity:colon mucosa RGD PMID:2436227 RGD:150521541 NCBI chr 2:26,344,480...26,367,448
Ensembl chr 2:26,343,450...26,367,776 		JBrowse link
G STK11 serine/threonine kinase 11 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:14623934 PMID:15121768 PMID:25186949 PMID:25741868 PMID:26467025 More... NCBI chr 6:973,033...996,857
Ensembl chr 6:974,144...995,136 		JBrowse link
G TGFB1 transforming growth factor beta 1 disease_progression ISO RGD PMID:11166150 RGD:13432074 NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365 		JBrowse link
G TGFB2 transforming growth factor beta 2 disease_progression ISO RGD PMID:10416598 PMID:11166150 RGD:13432074 RGD:13432084 NCBI chr25:11,163,651...11,259,868
Ensembl chr25:11,163,100...11,258,470 		JBrowse link
G TLR3 toll like receptor 3 ISO protein:increased expression:colon RGD PMID:23467704 RGD:21079438 NCBI chr 7:131,991,068...132,014,366
Ensembl chr 7:131,991,029...132,016,232 		JBrowse link
G TNFRSF17 TNF receptor superfamily member 17 ISO RGD PMID:11104810 RGD:2317311 NCBI chr 5:11,435,306...11,438,573
Ensembl chr 5:11,435,842...11,438,351 		JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A ISO protein:increased expression:serum (human) RGD PMID:1655258 RGD:5131434 NCBI chr11:6,364,544...6,378,880
Ensembl chr11:6,364,330...6,378,902 		JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B ISO protein:increased expression:serum (human) RGD PMID:1655258 RGD:5131434 NCBI chr20:119,590,621...119,633,562
Ensembl chr20:119,590,325...119,633,497 		JBrowse link
G TOE1 target of EGR1, exonuclease ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:18271935 PMID:25741868 PMID:28492532 NCBI chr20:87,446,367...87,450,832
Ensembl chr20:87,444,683...87,450,232 		JBrowse link
G TP53 tumor protein p53 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:1565143 PMID:1683921 PMID:1978757 PMID:2932480 PMID:7887414 More... NCBI chr16:7,047,686...7,065,567
Ensembl chr16:7,045,146...7,066,223 		JBrowse link
G TYMS thymidylate synthetase ISO human tumor in mouse model RGD PMID:17848948 RGD:5133430 NCBI chr18:60,030,640...60,043,297
Ensembl chr18:60,030,658...60,041,856 		JBrowse link
G UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 ISO mRNA:increased expression:colonic mucosa (human) RGD PMID:8541345 RGD:11352739 NCBI chr 6:17,040,127...17,043,569
Ensembl chr 6:17,040,064...17,045,737 		JBrowse link
G VEGFA vascular endothelial growth factor A treatment ISO RGD PMID:18657413 RGD:15003195 NCBI chr17:28,377,959...28,394,508 JBrowse link
colorectal adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB1 ATP binding cassette subfamily B member 1 susceptibility ISO DNA:polymorphism: :3435C>T (human) RGD PMID:16107775 RGD:2312343 NCBI chr21:61,211,044...61,430,691
Ensembl chr21:61,322,748...61,529,274 		JBrowse link
G ARPC2 actin related protein 2/3 complex subunit 2 ISO mRNA:decreased expression:colonic mucosa (human) RGD PMID:25107436 RGD:11049173 NCBI chr10:104,098,275...104,144,043
Ensembl chr10:104,098,402...104,135,791 		JBrowse link
G BCL2L1 BCL2 like 1 ISO protein:increased expression:colonic mucosa (human) RGD PMID:8625322 RGD:11353854 NCBI chr 2:36,059,024...36,118,332
Ensembl chr 2:36,058,919...36,116,470 		JBrowse link
G BIRC7 baculoviral IAP repeat containing 7 ISO RGD PMID:21122381 RGD:13217408 NCBI chr 2:965,811...970,983 JBrowse link
G BORCS5 BLOC-1 related complex subunit 5 susceptibility ISO DNA:SNP:3'utr: (rs3803098) A>G (human) RGD PMID:27354594 RGD:152177496 NCBI chr11:12,259,080...12,363,576
Ensembl chr11:12,259,495...12,364,740 		JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase disease_progression ISO RGD PMID:24500602 RGD:11567230 NCBI chr21:109,495,525...109,690,261 JBrowse link
G BRD8 bromodomain containing 8 disease_progression ISO RGD PMID:19787264 RGD:9587763 NCBI chr23:40,808,706...40,848,696
Ensembl chr23:40,827,739...40,849,030 		JBrowse link
G CA12 carbonic anhydrase 12 severity ISO RGD PMID:10666387 RGD:155226866 NCBI chr26:20,162,706...20,221,680
Ensembl chr26:20,162,926...20,224,502 		JBrowse link
G CCDC17 coiled-coil domain containing 17 susceptibility ISO DNA:SNP:3'utr: (rs2275085) T>C (human) RGD PMID:27354594 RGD:152177496 NCBI chr20:87,174,581...87,179,411
Ensembl chr20:87,175,451...87,180,323 		JBrowse link
G CD44 CD44 molecule (IN blood group) disease_progression ISO mRNA, protein:splice variant, increased expression:large intestine RGD PMID:16425351 RGD:2289356 NCBI chr 1:30,039,854...30,132,646
Ensembl chr 1:30,039,749...30,132,416 		JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 susceptibility ISO DNA:SNPs:enhancers: (rs6013897, rs158552, rs17217119) (human) RGD PMID:28009432 RGD:151665179 NCBI chr 2:9,868,794...9,889,510
Ensembl chr 2:9,868,678...9,885,884 		JBrowse link
G CYP4F8 cytochrome P450 family 4 subfamily F member 8 susceptibility ISO DNA:SNP:3'utr: (rs2283606) T>C (human) RGD PMID:27354594 RGD:152177496 NCBI chr 6:14,211,899...14,229,793
Ensembl chr 6:14,215,337...14,229,509 		JBrowse link
G DNMT3B DNA methyltransferase 3 beta susceptibility ISO DNA:SNP: : 39179G>T(human) RGD PMID:19626461 RGD:9589082 NCBI chr 2:37,128,635...37,176,033
Ensembl chr 2:37,146,538...37,174,570 		JBrowse link
G DOK3 docking protein 3 susceptibility ISO DNA:SNP:3'utr: (rs2279398) (human) RGD PMID:27354594 RGD:152177496 NCBI chr23:79,514,800...79,522,176
Ensembl chr23:79,515,025...79,520,557 		JBrowse link
G EMX2 empty spiracles homeobox 2 exacerbates ISO mRNA:decreased expression:colorectal mucosa (human) RGD PMID:28830374 RGD:153323301 NCBI chr 9:110,347,043...110,353,647
Ensembl chr 9:110,347,379...110,353,643 		JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 severity ISO RGD PMID:16507107 RGD:126781766 NCBI chr11:52,020,912...52,043,809
Ensembl chr11:52,021,058...52,044,028 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit disease_progression ISO DNA:SNP: rs3757441 (human) RGD PMID:21926398 RGD:126779594 NCBI chr21:117,380,518...117,515,224
Ensembl chr21:117,380,361...117,421,573 		JBrowse link
G FAM151A family with sequence similarity 151 member A susceptibility ISO DNA:SNP:3'utr: (rs11206394) G>C (human) RGD PMID:27354594 RGD:152177496 NCBI chr20:78,308,053...78,323,398
Ensembl chr20:78,308,460...78,324,565 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 treatment ISO human cell line in a mouse model RGD PMID:31255687 RGD:155663557 NCBI chr 9:114,234,344...114,354,736
Ensembl chr 9:114,234,250...114,354,704 		JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 severity ISO DNA:polymorphisms:multiple RGD PMID:33075166 RGD:149735513 NCBI chr 3:7,117,579...7,222,600
Ensembl chr 3:7,116,947...7,222,849 		JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:8264230 RGD:13210753 NCBI chr24:52,497,465...52,501,161
Ensembl chr24:52,497,521...52,501,514 		JBrowse link
G GATA6 GATA binding protein 6 severity ISO human cells in a mouse model RGD PMID:24452072 RGD:13208874 NCBI chr18:58,312,328...58,345,472
Ensembl chr18:58,311,482...58,343,746 		JBrowse link
G GJB3 gap junction protein beta 3 susceptibility ISO DNA:SNP:3'utr: (rs9118) C>G (human) RGD PMID:27354594 RGD:152177496 NCBI chr20:98,100,285...98,106,517
Ensembl chr20:98,102,413...98,103,225 		JBrowse link
G GPX4 glutathione peroxidase 4 susceptibility ISO DNA:SNP:3' utr:c.718T>C (human) RGD PMID:18850177 RGD:152998895 NCBI chr 6:873,867...876,225 JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO RGD PMID:21609933 RGD:13210767 NCBI chr22:60,732,449...61,002,735
Ensembl chr22:60,733,465...60,997,239 		JBrowse link
G HPCA hippocalcin severity ISO mRNA, protein:increased expression:colon carcinoma (human) RGD PMID:22696308 RGD:9693683 NCBI chr20:99,974,952...99,983,194
Ensembl chr20:99,975,742...99,980,728 		JBrowse link
G IER2 immediate early response 2 disease_progression ISO protein:increased expression:colon (human) RGD PMID:22120713 RGD:153323322 NCBI chr 6:11,834,998...11,838,421
Ensembl chr 6:11,836,706...11,837,377 		JBrowse link
G IL16 interleukin 16 susceptibility ISO DNA:SNP:3'utr: (rs1131445) T>C (human) RGD PMID:27354594 RGD:152177496 NCBI chr26:2,080,985...2,208,764
Ensembl chr26:2,077,228...2,208,431 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:8264230 RGD:13210753 NCBI chr20:74,204,481...74,207,835
Ensembl chr20:74,205,542...74,206,546 		JBrowse link
G JUNB JunB proto-oncogene, AP-1 transcription factor subunit ISO protein:increased expression:colorectal mucosa (human) RGD PMID:10874008 RGD:151347670 NCBI chr 6:11,479,108...11,480,942
Ensembl chr 6:11,479,407...11,480,450 		JBrowse link
G KCNH1 potassium voltage-gated channel subfamily H member 1 severity ISO DNA:amplification: (human) RGD PMID:17289873 RGD:9693694 NCBI chr25:18,353,356...18,788,472
Ensembl chr25:18,353,482...18,783,592 		JBrowse link
G KDR kinase insert domain receptor treatment
severity 		ISO protein:altered phosphorylation:colon RGD PMID:25372416 PMID:26325365 RGD:11529678 RGD:126848811 NCBI chr 7:13,435,059...13,482,236
Ensembl chr 7:13,435,096...13,482,771 		JBrowse link
G KMT2B lysine methyltransferase 2B ISO human gene in a mouse model RGD PMID:22713656 RGD:9588601 NCBI chr 6:30,626,723...30,648,204
Ensembl chr 6:30,626,848...30,647,883 		JBrowse link
G LOC103224275 glutathione S-transferase Mu 1 ISO RGD PMID:12421502 RGD:14700996 NCBI chr20:23,854,969...23,861,634 JBrowse link
G LOC103243413 signal transducer and activator of transcription 5B disease_progression
ameliorates 		ISO protein:increased expression:colorectum (human)
human cells in a mouse model 		RGD PMID:21826656 PMID:23733954 RGD:11076784 RGD:153298931 NCBI chr16:63,997,486...64,070,392
Ensembl chr16:63,997,441...64,070,445 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 treatment ISO RGD PMID:25405740 RGD:13210782 NCBI chr19:4,246,144...4,352,648
Ensembl chr19:4,246,122...4,353,325 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 treatment ISO RGD PMID:25405740 RGD:13210782 NCBI chr 5:26,536,471...26,545,666
Ensembl chr 5:26,536,532...26,546,461 		JBrowse link
G MAPK8 mitogen-activated protein kinase 8 ISO RGD PMID:21122381 RGD:13217408 NCBI chr 9:43,356,603...43,489,066
Ensembl chr 9:43,356,308...43,393,425 		JBrowse link
G MSH2 mutS homolog 2 disease_progression ISO RGD PMID:11604476 RGD:126790556 NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor exacerbates ISO RNA:decreased expression:colon (human) RGD PMID:28533893 RGD:150540307 NCBI chr15:1,276,804...1,281,811
Ensembl chr15:1,276,798...1,281,166 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO protein:increased expression:colorectal mucosa (human) RGD PMID:19198856 RGD:153002579 NCBI chr 8:65,855,232...66,151,733
Ensembl chr 8:65,855,235...66,040,947 		JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 susceptibility ISO DNA:SNP:3'utr: (rs3135499) C>A (human) RGD PMID:27354594 RGD:152177496 NCBI chr 5:36,492,158...36,531,766
Ensembl chr 5:36,496,414...36,530,499 		JBrowse link
G PCSK4 proprotein convertase subtilisin/kexin type 4 susceptibility ISO DNA:SNP:3'utr: (rs1047854) C>T (human) RGD PMID:27354594 RGD:152177496 NCBI chr 6:1,253,729...1,264,114
Ensembl chr 6:1,254,276...1,263,847 		JBrowse link
G RAB24 RAB24, member RAS oncogene family susceptibility ISO DNA:SNP:3'utr: (rs1128287) C>A (human) RGD PMID:27354594 RGD:152177496 NCBI chr23:79,311,135...79,313,414
Ensembl chr23:79,310,704...79,312,994 		JBrowse link
G RAC1 Rac family small GTPase 1 disease_progression ISO mRNA, protein:increased expression:colorectum (human) RGD PMID:30926638 RGD:155230818 NCBI chr28:15,583,609...15,610,753
Ensembl chr28:15,583,516...15,610,328 		JBrowse link
G RAF1 Raf-1 proto-oncogene, serine/threonine kinase ISO RGD PMID:21122381 RGD:13217408 NCBI chr22:48,560,270...48,643,537
Ensembl chr22:48,561,161...48,618,020 		JBrowse link
G RGS5 regulator of G protein signaling 5 susceptibility ISO DNA:SNP:3'utr: (rs15049) C>A (human) RGD PMID:27354594 RGD:152177496 NCBI chr25:65,608,384...65,667,811
Ensembl chr25:65,608,303...65,662,772 		JBrowse link
G RICTOR RPTOR independent companion of MTOR complex 2 disease_progression ISO protein:increased expression:colon (human) RGD PMID:27729429 RGD:152995521 NCBI chr 4:37,758,531...37,885,323
Ensembl chr 4:37,762,901...37,873,766 		JBrowse link
G RNASET2 ribonuclease T2 ISO human cells in mouse model RGD PMID:27014725 RGD:153002831 NCBI chr13:94,670,376...94,702,585
Ensembl chr13:94,668,580...94,702,587 		JBrowse link
G RSPH1 radial spoke head component 1 susceptibility ISO DNA:SNP:3'utr: (rs2839531) T>C (human) RGD PMID:27354594 RGD:152177496 NCBI chr 2:86,348,365...86,371,908
Ensembl chr 2:86,348,056...86,371,858 		JBrowse link
G SLC7A5 solute carrier family 7 member 5 disease_progression ISO RGD PMID:32359697 RGD:151361139 NCBI chr 5:73,229,953...73,269,801
Ensembl chr 5:73,229,951...73,269,754 		JBrowse link
G SMARCB1 SWI/SNF related BAF chromatin remodeling complex subunit B1 disease_progression ISO protein:decreased expression:colon, nucleus RGD PMID:27184481 RGD:127285648 NCBI chr19:6,902,985...6,945,111
Ensembl chr19:6,902,951...6,944,784 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 no_association ISO RGD PMID:25339048 RGD:150573690 NCBI chr 5:10,731,866...10,733,745
Ensembl chr 5:10,732,350...10,732,991 		JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 ISO mRNA:increased expression:colorectum (human) RGD PMID:11358845 RGD:155631271 NCBI chr26:9,275,317...9,311,302
Ensembl chr26:9,278,303...9,311,475 		JBrowse link
G TP53 tumor protein p53 ISO RGD PMID:8264230 RGD:13210753 NCBI chr16:7,047,686...7,065,567
Ensembl chr16:7,045,146...7,066,223 		JBrowse link
G TP73 tumor protein p73 exacerbates ISO protein:increased expression:colon (human) RGD PMID:19956069 RGD:151347585 NCBI chr20:127,958,002...128,035,792
Ensembl chr20:127,958,809...128,013,691 		JBrowse link
G TPRX1 tetrapeptide repeat homeobox 1 susceptibility ISO DNA:SNP:3'utr: (rs12462695) C>A (human) RGD PMID:27354594 RGD:152177496 NCBI chr 6:41,099,988...41,102,217 JBrowse link
G TPST1 tyrosylprotein sulfotransferase 1 susceptibility ISO DNA:SNP:3'utr: (rs3757417) G>T (human) RGD PMID:27354594 RGD:152177496 NCBI chr28:1,925,002...2,065,405
Ensembl chr28:1,925,056...2,065,632 		JBrowse link
G TYMS thymidylate synthetase ISO protein:increased activity:colon (rat) RGD PMID:10226549 RGD:2317418 NCBI chr18:60,030,640...60,043,297
Ensembl chr18:60,030,658...60,041,856 		JBrowse link
G UTP23 UTP23 small subunit processome component susceptibility ISO DNA:missense mutation:cds:p.P215Q (rs16888728) (human) RGD PMID:26553438 RGD:11041896 NCBI chr 8:111,404,636...111,410,083
Ensembl chr 8:111,404,634...111,413,673 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 treatment ISO associated with Neoplasm Metastasis; DNA:missense mutation:cds: p.R399Q, c.1196G>A (human) RGD PMID:19908066 RGD:150573820 NCBI chr 6:37,062,149...37,095,138
Ensembl chr 6:37,060,439...37,095,094 		JBrowse link
colorectal cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AAGAB alpha and gamma adaptin binding protein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:16,249,811...16,310,633
Ensembl chr26:16,250,327...16,310,836 		JBrowse link
G ABHD17C abhydrolase domain containing 17C, depalmitoylase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:2,633,997...2,695,187 JBrowse link
G ABHD2 abhydrolase domain containing 2, acylglycerol lipase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:7,631,436...7,742,209
Ensembl chr29:7,631,412...7,740,394 		JBrowse link
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase disease_progression
ameliorates 		ISO mRNA, protein:increased expression:colorectum (human)
human gene in mouse model 		RGD PMID:32850446 RGD:126908002 NCBI chr12:7,258,932...7,435,658
Ensembl chr12:7,256,648...7,312,734 		JBrowse link
G ACAN aggrecan ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:7,345,350...7,416,951 JBrowse link
G ACSBG1 acyl-CoA synthetase bubblegum family member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:5,117,740...5,183,164
Ensembl chr26:5,117,818...5,185,418 		JBrowse link
G ACTC1 actin alpha cardiac muscle 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:48,105,271...48,110,670
Ensembl chr26:48,105,216...48,110,896 		JBrowse link
G ADA adenosine deaminase disease_progression ISO RGD PMID:11114712 RGD:152995282 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G ADAM10 ADAM metallopeptidase domain 10 severity ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar
RGD		 PMID:28492532 PMID:31565100 RGD:153298908 NCBI chr26:24,768,827...24,921,169
Ensembl chr26:24,768,915...24,919,009 		JBrowse link
G ADAM28 ADAM metallopeptidase domain 28 severity ISO mRNA,protein:decreased expression:colorectum RGD PMID:27661126 PMID:31565100 RGD:153298906 RGD:153298908 NCBI chr 8:22,424,260...22,483,878
Ensembl chr 8:22,430,579...22,488,257 		JBrowse link
G ADAMTS7 ADAM metallopeptidase with thrombospondin type 1 motif 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532
G ADAMTSL3 ADAMTS like 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:1,592,205...1,974,406
Ensembl chr29:1,592,300...1,972,722 		JBrowse link
G ADAR adenosine deaminase RNA specific ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr20:9,194,611...9,241,102
Ensembl chr20:9,219,937...9,241,329 		JBrowse link
G ADM adrenomedullin ISO mRNA,protein:increased expression:colorectum (human) RGD PMID:21839130 RGD:152985531 NCBI chr 1:54,518,359...54,520,683
Ensembl chr 1:54,518,358...54,520,686 		JBrowse link
G ADPGK ADP dependent glucokinase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:10,693,211...10,726,606
Ensembl chr26:10,693,291...10,725,594 		JBrowse link
G AEN apoptosis enhancing nuclease ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:7,160,445...7,172,082
Ensembl chr29:7,165,964...7,172,304 		JBrowse link
G AFF4 ALF transcription elongation factor 4 disease_progression ISO RGD PMID:35223479 RGD:155631267 NCBI chr23:35,693,427...35,782,746
Ensembl chr23:35,699,094...35,782,683 		JBrowse link
G AFG2B AFG2 AAA ATPase homolog B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:37,793,373...37,812,921
Ensembl chr26:37,793,379...37,811,582 		JBrowse link
G AGBL1 AGBL carboxypeptidase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:4,702,646...5,528,743
Ensembl chr29:4,703,207...5,294,973 		JBrowse link
G AKAP13 A-kinase anchoring protein 13 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:4,009,921...4,364,226
Ensembl chr29:4,106,732...4,359,516 		JBrowse link
G AKAP9 A-kinase anchoring protein 9 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar PMID:23861362 PMID:24033266 PMID:25741868 PMID:28492532 NCBI chr21:56,889,669...57,061,526
Ensembl chr21:56,890,183...57,061,232 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 disease_progression
susceptibility
ameliorates 		ISO protein:increased serine phosphorylation:colon
DNA:point mutation:cds:p.E17K (human)
human cells in mouse model
ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		OMIM
RGD
ClinVar		 PMID:9536098 PMID:17576681 PMID:17611497 PMID:21425139 PMID:25741868 More... RGD:13209139 RGD:151893289 RGD:1643334 NCBI chr24:82,704,087...82,730,711
Ensembl chr24:82,704,068...82,727,698 		JBrowse link
G AKT2 AKT serine/threonine kinase 2 onset ISO protein:increased expression:colon (rat)
protein:increased expression:colon (human) 		RGD PMID:11756242 RGD:2313394 NCBI chr 6:34,688,585...34,740,458
Ensembl chr 6:34,690,462...34,720,781 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:25,439,159...25,557,199
Ensembl chr26:25,439,360...25,557,202 		JBrowse link
G ALPK3 alpha kinase 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:3,484,483...3,544,016
Ensembl chr29:3,486,947...3,542,798 		JBrowse link
G ALX4 ALX homeobox 4 ISO DNA:hypermethylation:serum: RGD PMID:17101318 PMID:26918234 RGD:153323327 RGD:153344524 NCBI chr 1:21,051,413...21,099,159
Ensembl chr 1:21,051,580...21,097,605 		JBrowse link
G AMER1 APC membrane recruitment protein 1 onset
exacerbates 		ISO DNA:mutations: (human)
protein:decreased expression:colonic mucosa (human)
ClinVar Annotator: match by term: Colorectal cancer 		RGD
ClinVar		 PMID:28492532 PMID:30631060 PMID:31243121 PMID:34549727 PMID:34771502 RGD:151665181 RGD:151665183 NCBI chr  X:54,568,751...54,591,284
Ensembl chr  X:54,573,476...54,576,880 		JBrowse link
G ANKDD1A ankyrin repeat and death domain containing 1A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,631,658...18,672,006
Ensembl chr26:18,629,575...18,667,567 		JBrowse link
G ANKRD34C ankyrin repeat domain 34C ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:4,093,311...4,110,125
Ensembl chr26:4,096,668...4,098,275 		JBrowse link
G ANKRD63 ankyrin repeat domain 63 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,732,737...42,736,964
Ensembl chr26:42,732,823...42,733,968 		JBrowse link
G ANP32A acidic nuclear phosphoprotein 32 family member A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:14,650,600...14,691,108
Ensembl chr26:14,653,745...14,691,492 		JBrowse link
G ANPEP alanyl aminopeptidase, membrane ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:8,324,094...8,354,491
Ensembl chr29:8,323,797...8,346,581 		JBrowse link
G ANTXR1 ANTXR cell adhesion molecule 1 ISO mRNA:increased expression:blood: RGD PMID:21573768 RGD:9684945 NCBI chr14:37,849,911...38,116,339
Ensembl chr14:37,877,436...38,115,938 		JBrowse link
G ANXA2 annexin A2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:23,100,000...23,147,687
Ensembl chr26:23,099,992...23,145,457 		JBrowse link
G AP3B2 adaptor related protein complex 3 subunit beta 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:2,943,836...2,994,655
Ensembl chr29:2,943,919...2,994,700 		JBrowse link
G AP4E1 adaptor related protein complex 4 subunit epsilon 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:32,358,432...32,447,207
Ensembl chr26:32,357,199...32,446,274 		JBrowse link
G APC APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: DLC1-related condition | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: GALNT12-related condition | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		OMIM
ClinVar		 PMID:1316610 PMID:1324223 PMID:1338764 PMID:1651174 PMID:1651563 More... NCBI chr23:15,992,437...16,135,117
Ensembl chr23:16,042,287...16,137,067 		JBrowse link
G APH1B aph-1 homolog B, gamma-secretase subunit ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:20,236,666...20,265,167
Ensembl chr26:20,240,015...20,265,151 		JBrowse link
G APOC3 apolipoprotein C3 disease_progression ISO RGD PMID:31502404 RGD:153344612 NCBI chr 1:108,196,283...108,199,274
Ensembl chr 1:108,196,939...108,199,342 		JBrowse link
G AQP9 aquaporin 9 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:25,326,108...25,374,743
Ensembl chr26:25,326,087...25,373,336 		JBrowse link
G AQR aquarius intron-binding spliceosomal factor ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:47,927,167...48,036,764
Ensembl chr26:47,927,137...48,036,478 		JBrowse link
G ARID1A AT-rich interaction domain 1A disease_progression
exacerbates 		ISO protein:decreased expression:colorectum (human)
ClinVar Annotator: match by term: Colorectal cancer 		RGD
ClinVar		 PMID:25561809 PMID:31263894 RGD:126777686 RGD:126779574 NCBI chr20:105,981,549...106,066,093
Ensembl chr20:105,981,290...106,065,672 		JBrowse link
G ARID2 AT-rich interaction domain 2 exacerbates ISO RGD PMID:33262464 RGD:150429650 NCBI chr11:41,933,650...42,117,495
Ensembl chr11:42,028,083...42,118,892 		JBrowse link
G ARID3B AT-rich interaction domain 3B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,884,391...8,943,803
Ensembl chr26:8,882,821...8,941,155 		JBrowse link
G ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:10,890,440...11,002,812
Ensembl chr26:10,893,735...11,002,159 		JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:2,790,059...2,990,760
Ensembl chr26:2,794,372...2,990,814 		JBrowse link
G ARPP19 cAMP regulated phosphoprotein 19 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:30,825,846...30,844,005
Ensembl chr26:30,826,359...30,843,251 		JBrowse link
G ASAP3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 disease_progression ISO mRNA, protein:increased expression:colon (human) RGD PMID:28502111 RGD:153305906 NCBI chr20:109,193,261...109,248,104
Ensembl chr20:109,193,469...109,248,242 		JBrowse link
G ATM ATM serine/threonine kinase disease_progression ISO DNA:mutations
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		RGD
ClinVar		 PMID:100011 PMID:9443866 PMID:9887333 PMID:10330348 PMID:10817650 More... RGD:126790575 RGD:150340714 NCBI chr 1:99,653,208...99,786,889
Ensembl chr 1:99,653,139...99,791,520 		JBrowse link
G ATOSA atos homolog A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:30,687,636...30,813,611
Ensembl chr26:30,715,925...30,814,462 		JBrowse link
G ATP8B4 ATPase phospholipid transporting 8B4 (putative) ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:33,190,645...33,510,406
Ensembl chr26:33,256,406...33,446,584 		JBrowse link
G AURKA aurora kinase A susceptibility ISO ClinVar Annotator: match by term: AURKA-related condition | ClinVar Annotator: match by term: Colorectal cancer OMIM
ClinVar		 PMID:9771714 PMID:10511710 PMID:12881723 PMID:25741868 NCBI chr 2:7,730,060...7,753,167
Ensembl chr 2:7,734,128...7,752,395 		JBrowse link
G AVEN apoptosis and caspase activation inhibitor ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:48,868,244...49,048,037
Ensembl chr26:48,868,475...49,050,258 		JBrowse link
G AXIN2 axin 2 treatment
disease_progression 		ISO DNA:SNP::rs2240308, c.148G>A(human)
ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: DLC1-related condition | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: GALNT12-related condition | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		OMIM
RGD
ClinVar		 PMID:9536098 PMID:11017067 PMID:12101426 PMID:15042511 PMID:15735151 More... RGD:151356510 RGD:151356662 NCBI chr16:55,874,043...55,906,739
Ensembl chr16:55,874,072...55,907,281 		JBrowse link
G AZGP1 alpha-2-glycoprotein 1, zinc-binding disease_progression ISO mRNA,protein:decreased expression:colorectum:
protein:increased expression:serum 		RGD PMID:23393224 PMID:29755407 PMID:32525817 RGD:153350127 RGD:153350137 RGD:153350147 NCBI chr28:13,104,262...13,120,329
Ensembl chr28:13,104,323...13,120,363 		JBrowse link
G B2M beta-2-microglobulin ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:38,331,818...38,338,785
Ensembl chr26:38,331,442...38,338,809 		JBrowse link
G BAHD1 bromo adjacent homology domain containing 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,543,308...42,572,880
Ensembl chr26:42,543,107...42,570,430 		JBrowse link
G BAMBI BMP and activin membrane bound inhibitor disease_progression ISO RGD PMID:18756595 PMID:29085481 RGD:14390154 RGD:14390156 NCBI chr 9:28,279,479...28,284,825
Ensembl chr 9:28,279,523...28,285,937 		JBrowse link
G BARHL2 BarH like homeobox 2 severity ISO RGD PMID:27453340 RGD:14392684 NCBI chr20:42,743,465...42,757,833
Ensembl chr20:42,743,888...42,749,876 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator ISO OMIM NCBI chr 6:42,186,028...42,193,105 JBrowse link
G BBS4 Bardet-Biedl syndrome 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:10,742,982...10,799,615
Ensembl chr26:10,743,850...10,775,908 		JBrowse link
G BCL2A1 BCL2 related protein A1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:3,451,773...3,461,215
Ensembl chr26:3,451,873...3,461,180 		JBrowse link
G BCL2L10 BCL2 like 10 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:31,274,015...31,277,377
Ensembl chr26:31,274,119...31,276,937 		JBrowse link
G BCOR BCL6 corepressor treatment ISO RGD PMID:27880939 RGD:150340704 NCBI chr  X:37,191,242...37,319,966
Ensembl chr  X:37,192,874...37,319,782 		JBrowse link
G BIRC2 baculoviral IAP repeat containing 2 exacerbates ISO mRNA:decreased expression:colonic mucosa (human) RGD PMID:27827395 RGD:153344527 NCBI chr 1:93,721,449...93,746,638 JBrowse link
G BIRC3 baculoviral IAP repeat containing 3 exacerbates ISO protein:increased expression:colorectal mucosa, cytoplasm (human)
mRNA:increased expression:colorectum (human)
mRNA:decreased expression:colonic mucosa (human) 		RGD PMID:27827395 PMID:30653121 PMID:34389694 RGD:152999015 RGD:153305952 RGD:153344527 NCBI chr 1:93,692,239...93,711,905 JBrowse link
G BIRC5 baculoviral IAP repeat containing 5 ISO mRNA, protein:increased expression:colonic mucosa (human) RGD PMID:27827395 RGD:153344527 NCBI chr16:70,226,824...70,237,000 JBrowse link
G BLM BLM RecQ like helicase ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:9,046,485...9,152,320
Ensembl chr29:9,045,373...9,152,254 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:37,605,891...37,622,302
Ensembl chr26:37,604,412...37,622,083 		JBrowse link
G BMF Bcl2 modifying factor ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,893,997...42,915,062
Ensembl chr26:42,894,460...42,915,062 		JBrowse link
G BNC1 basonuclin zinc finger protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:2,331,958...2,360,832
Ensembl chr29:2,349,650...2,360,804 		JBrowse link
G BNIP2 BCL2 interacting protein 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:23,821,350...23,846,130
Ensembl chr26:23,821,499...23,855,741 		JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		OMIM
ClinVar		 PMID:2500657 PMID:12068308 PMID:12198537 PMID:12447372 PMID:12460918 More... NCBI chr21:109,495,525...109,690,261 JBrowse link
G BRCA1 BRCA1 DNA repair associated disease_progression
onset 		ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 RGD
ClinVar		 PMID:16533773 PMID:20862552 PMID:25741868 PMID:28492532 PMID:30209399 More... RGD:126790575 RGD:126925961 NCBI chr16:63,162,827...63,243,928 JBrowse link
G BRCA2 BRCA2 DNA repair associated severity ISO ClinVar Annotator: match by term: Colorectal cancer RGD
ClinVar		 PMID:16533773 PMID:28492532 PMID:33609447 RGD:126790575 NCBI chr 3:11,070,086...11,155,257
Ensembl chr 3:11,071,682...11,155,213 		JBrowse link
G BRF1 BRF1 general transcription factor IIIB subunit ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr24:83,117,823...83,192,435
Ensembl chr24:83,117,685...83,192,431 		JBrowse link
G BRIP1 BRCA1 interacting DNA helicase 1 severity
susceptibility 		ISO mRNA:increased expression:colon epithelium (human)
DNA:frameshift mutation:cds:p.N568fsX9 (human)
ClinVar Annotator: match by term: Colorectal cancer 		RGD
ClinVar		 PMID:22526901 PMID:25741868 PMID:27165003 PMID:28492532 PMID:30809968 RGD:11252105 RGD:11252117 NCBI chr16:32,909,226...33,085,551
Ensembl chr16:32,910,693...33,082,587 		JBrowse link
G BTBD1 BTB domain containing 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:2,580,373...2,636,988
Ensembl chr29:2,580,441...2,637,084 		JBrowse link
G BTK Bruton tyrosine kinase exacerbates
disease_progression 		ISO protein:increased expression:colorectum (human) RGD PMID:31238520 PMID:31518438 RGD:151347850 RGD:151347852 NCBI chr  X:89,690,569...89,727,420 JBrowse link
G BUB1 BUB1 mitotic checkpoint serine/threonine kinase susceptibility ISO DNA:splice-site mutation, missense mutation
ClinVar Annotator: match by term: BUB1-related condition | ClinVar Annotator: match by term: Colorectal cancer with chromosomal instability, somatic | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		OMIM
RGD
ClinVar		 PMID:9521327 PMID:9536098 PMID:17576681 PMID:25741868 PMID:28492532 RGD:1600539 NCBI chr14:13,647,342...13,698,061
Ensembl chr14:13,647,462...13,697,932 		JBrowse link
G BUB1B BUB1 mitotic checkpoint serine/threonine kinase B ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		OMIM
ClinVar		 PMID:9536098 PMID:17576681 PMID:20516114 PMID:24033266 PMID:24728327 More... NCBI chr26:42,769,955...42,855,353
Ensembl chr26:42,792,830...42,855,306 		JBrowse link
G C2CD4A C2 calcium dependent domain containing 4A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:21,453,198...21,458,225
Ensembl chr26:21,455,439...21,456,554 		JBrowse link
G C2CD4B C2 calcium dependent domain containing 4B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:21,359,297...21,361,910
Ensembl chr26:21,360,448...21,361,542 		JBrowse link
G CA12 carbonic anhydrase 12 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:20,162,706...20,221,680
Ensembl chr26:20,162,926...20,224,502 		JBrowse link
G CALML4 calmodulin like 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:15,278,349...15,291,934 JBrowse link
G CALR calreticulin ISO protein:decreased expression:colorectum (human) RGD PMID:26913609 RGD:150521695 NCBI chr 6:11,618,691...11,624,299
Ensembl chr 6:11,618,396...11,623,792 		JBrowse link
G CAPN3 calpain 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:40,568,320...40,657,443
Ensembl chr26:40,568,885...40,625,597 		JBrowse link
G CASP9 caspase 9 no_association ISO DNA:SNP:promoter:-1263A>G (human)
DNA:SNPs::rs4646077, rs4233532, rs2881930 (human) 		RGD PMID:21538054 PMID:23303631 RGD:13210582 RGD:13210584 NCBI chr20:116,772,819...116,798,402
Ensembl chr20:116,772,155...116,798,930 		JBrowse link
G CATSPER2 cation channel sperm associated 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,300,273...39,325,846 JBrowse link
G CBL Cbl proto-oncogene disease_progression ISO RGD PMID:30029779 RGD:126925222 NCBI chr 1:110,581,049...110,679,284
Ensembl chr 1:110,581,143...110,674,481 		JBrowse link
G CCDC32 coiled-coil domain containing 32 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,440,362...42,453,531
Ensembl chr26:42,440,392...42,452,713 		JBrowse link
G CCDC9B coiled-coil domain containing 9B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,647,463...42,683,869
Ensembl chr26:42,674,301...42,680,175 		JBrowse link
G CCNB2 cyclin B2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:24,389,654...24,408,976
Ensembl chr26:24,389,642...24,409,346 		JBrowse link
G CCND1 cyclin D1 susceptibility ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to ClinVar
OMIM		 PMID:10667569 PMID:11459873 PMID:12097293 PMID:23502783 PMID:24870244 More... NCBI chr 1:4,909,616...4,922,272
Ensembl chr 1:4,907,353...4,922,357 		JBrowse link
G CCND2 cyclin D2 severity ISO mRNA, protein:increased expression:colorectum RGD PMID:19508551 PMID:28933597 PMID:31511084 RGD:151664740 RGD:151664741 RGD:151665111 NCBI chr11:4,307,419...4,339,003
Ensembl chr11:4,307,401...4,333,661 		JBrowse link
G CCNDBP1 cyclin D1 binding protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,794,572...39,807,919
Ensembl chr26:39,797,083...39,807,827 		JBrowse link
G CCPG1 cell cycle progression 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:28,029,124...28,076,609
Ensembl chr26:28,029,078...28,080,056 		JBrowse link
G CD276 CD276 molecule ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:9,772,948...9,794,395 JBrowse link
G CDAN1 codanin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:40,235,277...40,248,224
Ensembl chr26:40,235,297...40,250,757 		JBrowse link
G CDC73 cell division cycle 73 ameliorates ISO mRNA:increased expression:colorectum (human) RGD PMID:21315421 RGD:150539448 NCBI chr25:36,167,482...36,302,918
Ensembl chr25:36,170,134...36,302,812 		JBrowse link
G CDIN1 CDAN1 interacting nuclease 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:46,135,826...46,364,476
Ensembl chr26:46,137,567...46,363,393 		JBrowse link
G CELF6 CUGBP Elav-like family member 6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:11,135,021...11,169,351
Ensembl chr26:11,135,088...11,166,493 		JBrowse link
G CEMIP cell migration inducing hyaluronidase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:2,440,075...2,611,636
Ensembl chr26:2,438,706...2,519,563 		JBrowse link
G CEP152 centrosomal protein 152 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:34,473,648...34,608,650
Ensembl chr26:34,473,757...34,546,842 		JBrowse link
G CFAP161 cilia and flagella associated protein 161 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:2,242,522...2,257,405
Ensembl chr26:2,242,304...2,257,047 		JBrowse link
G CGNL1 cingulin like 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:25,957,184...26,130,867
Ensembl chr26:25,956,942...26,067,530 		JBrowse link
G CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,038,751...42,041,836
Ensembl chr26:42,038,528...42,041,760 		JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 exacerbates ISO mRNA:increased expression:lymph node (human) RGD PMID:28486105 PMID:29467924 RGD:153323299 RGD:153323304 NCBI chr11:6,603,820...6,641,278
Ensembl chr11:6,602,694...6,640,351 		JBrowse link
G CHEK2 checkpoint kinase 2 susceptibility ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Familial colorectal cancer
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
DNA:loss of heterozygosity
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		ClinVar
RGD		 PMID:3313277 PMID:10617473 PMID:11053450 PMID:11298456 PMID:11390408 More... RGD:2289706 NCBI chr19:11,567,529...11,621,180
Ensembl chr19:11,567,528...11,604,792 		JBrowse link
G CHP1 calcineurin like EF-hand protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:41,734,698...41,785,273
Ensembl chr26:41,733,063...41,785,586 		JBrowse link
G CHRM5 cholinergic receptor muscarinic 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:48,842,021...48,940,962
Ensembl chr26:48,842,779...48,844,377 		JBrowse link
G CHRNA3 cholinergic receptor nicotinic alpha 3 subunit ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:4,721,145...4,747,694
Ensembl chr26:4,722,489...4,737,164 		JBrowse link
G CHRNA5 cholinergic receptor nicotinic alpha 5 subunit ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:4,747,734...4,779,231
Ensembl chr26:4,749,766...4,776,822 		JBrowse link
G CHRNA7 cholinergic receptor nicotinic alpha 7 subunit ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:22561515 PMID:25992589 PMID:26493165 PMID:28492532 NCBI chr26:50,554,143...50,686,847
Ensembl chr26:50,551,829...50,686,803 		JBrowse link
G CHRNB4 cholinergic receptor nicotinic beta 4 subunit ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:4,700,217...4,717,363
Ensembl chr26:4,701,321...4,719,319 		JBrowse link
G CHST14 carbohydrate sulfotransferase 14 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,538,380...42,540,588
Ensembl chr26:42,539,203...42,540,333 		JBrowse link
G CIAO2A cytosolic iron-sulfur assembly component 2A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:19,448,702...19,470,212
Ensembl chr26:19,448,903...19,469,756 		JBrowse link
G CIB1 calcium and integrin binding 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:8,777,202...8,781,027
Ensembl chr29:8,777,436...8,781,030 		JBrowse link
G CIB2 calcium and integrin binding family member 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:5,222,657...5,248,133
Ensembl chr26:5,222,902...5,248,191 		JBrowse link
G CILP cartilage intermediate layer protein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,367,950...18,384,235
Ensembl chr26:18,370,640...18,384,222 		JBrowse link
G CIMAP1C ciliary microtubule associated protein 1C ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532
G CLK3 CDC like kinase 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,846,970...8,862,831 JBrowse link
G CLN6 CLN6 transmembrane ER protein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:15,259,186...15,278,249 JBrowse link
G CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit X ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,401,593...18,441,286
Ensembl chr26:18,401,798...18,440,915 		JBrowse link
G COMMD4 COMM domain containing 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,087,150...8,091,322
Ensembl chr26:8,086,872...8,089,301 		JBrowse link
G COPS2 COP9 signalosome subunit 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:34,136,457...34,167,810
Ensembl chr26:34,136,486...34,168,236 		JBrowse link
G CORO2B coronin 2B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:14,746,497...14,909,483
Ensembl chr26:14,746,379...14,895,951 		JBrowse link
G COX5A cytochrome c oxidase subunit 5A, mitochondrial ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,533,410...8,551,818
Ensembl chr26:8,533,453...8,552,280 		JBrowse link
G CPEB1 cytoplasmic polyadenylation element binding protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:3,005,891...3,106,732
Ensembl chr29:3,006,532...3,106,793 		JBrowse link
G CPLX3 complexin 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,640,661...8,649,510
Ensembl chr26:8,641,551...8,645,155 		JBrowse link
G CRABP1 cellular retinoic acid binding protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:4,987,927...4,996,431
Ensembl chr26:4,987,882...4,996,343 		JBrowse link
G CRTC3 CREB regulated transcription coactivator 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:9,223,410...9,341,576
Ensembl chr29:9,223,409...9,341,514 		JBrowse link
G CSF1R colony stimulating factor 1 receptor exacerbates ISO protein:decreased expression:colorectum (human) RGD PMID:32118593 RGD:150524285 NCBI chr23:52,663,290...52,723,652
Ensembl chr23:52,664,076...52,697,304 		JBrowse link
G CSK C-terminal Src kinase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,667,657...8,688,850
Ensembl chr26:8,667,655...8,688,824 		JBrowse link
G CSNK1G1 casein kinase 1 gamma 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:19,164,948...19,374,016
Ensembl chr26:19,164,986...19,372,834 		JBrowse link
G CSPG4 chondroitin sulfate proteoglycan 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:7,735,972...7,761,355
Ensembl chr26:7,694,014...7,761,342 		JBrowse link
G CTDSPL2 CTD small phosphatase like 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:38,516,044...38,626,963
Ensembl chr26:38,519,094...38,627,099 		JBrowse link
G CTNNA1 catenin alpha 1 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar PMID:28492532 PMID:32051609 PMID:34425242 NCBI chr23:41,423,504...41,599,458
Ensembl chr23:41,447,675...41,600,190 		JBrowse link
G CTNNB1 catenin beta 1 disease_progression
treatment 		ISO protein:increased expression:cytoplasm, nucleus
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
Human cells in mouse model 		OMIM
RGD
ClinVar		 PMID:17893236 PMID:23033978 PMID:24614104 PMID:25326669 PMID:25741868 More... RGD:153297782 RGD:2289840 NCBI chr22:2,679,488...2,725,034
Ensembl chr22:2,684,022...2,723,949 		JBrowse link
G CTNNBL1 catenin beta like 1 ISO DNA:snps:introns: c.326+4380A>G, c.1213+1838T>C, c.1393-7258G>A (rs2344481, rs2281148, rs2235460) (human) RGD PMID:21537400 RGD:9850254 NCBI chr 2:25,877,750...26,055,283
Ensembl chr 2:25,877,700...26,055,209 		JBrowse link
G CTPS2 CTP synthase 2 resistance ISO mRNA:increased expression:tumor (human) RGD PMID:21378502 RGD:5132879 NCBI chr  X:15,027,539...15,143,812
Ensembl chr  X:15,025,876...15,143,615 		JBrowse link
G CTSH cathepsin H ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:4,451,731...4,473,220
Ensembl chr26:4,451,774...4,472,855 		JBrowse link
G CTXN2 cortexin 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:35,081,624...35,091,836
Ensembl chr26:35,081,943...35,082,185 		JBrowse link
G CUNH11orf65 chromosome unknown C11orf65 homolog ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		ClinVar PMID:100011 PMID:9443866 PMID:9887333 PMID:10330348 PMID:10817650 More... NCBI chr 1:99,804,191...99,879,834
Ensembl chr 1:99,804,218...99,827,182 		JBrowse link
G CUNH15orf39 chromosome unknown C15orf39 homolog ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,249,619...8,259,065
Ensembl chr26:8,246,524...8,261,900 		JBrowse link
G CUNH15orf40 chromosome unknown C15orf40 homolog ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:2,641,930...2,652,387
Ensembl chr29:2,642,542...2,649,741 		JBrowse link
G CUNH15orf48 chromosome unknown C15orf48 homolog ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:37,780,940...37,783,855
Ensembl chr26:37,781,021...37,783,760 		JBrowse link
G CUNH15orf61 chromosome unknown C15orf61 homolog ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:15,968,332...15,978,000
Ensembl chr26:15,964,785...15,977,762 		JBrowse link
G CUNH15orf62 chromosome unknown C15orf62 homolog ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,234,247...42,238,692
Ensembl chr26:42,235,652...42,236,179 		JBrowse link
G CUX1 cut like homeobox 1 exacerbates ISO mRNA:increased expression:colorectum (human) RGD PMID:33014778 RGD:152985540 NCBI chr28:10,901,529...11,370,834
Ensembl chr28:10,937,512...11,370,702 		JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 severity
disease_progression
exacerbates
ameliorates 		ISO mRNA:increased expression:colonic epithelium (human)
human cells in mouse model; protein:increased expression:colorectum (human)
protein:increased expression:blood serum (human)
mRNA:increased expression:colorectum (human)
mRNA,protein:increased expression:colon (human)
mRNA:increased expression:colon (human) 		RGD PMID:15837989 PMID:27330310 PMID:28515923 PMID:28739729 PMID:29481800 More... RGD:151665323 RGD:151665332 RGD:151708720 RGD:151708721 RGD:151708726 RGD:151709000 RGD:151893497 RGD:151893498 RGD:152023657 NCBI chr10:20,336,470...20,340,308
Ensembl chr10:20,336,247...20,340,309 		JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:9,122,008...9,151,844 JBrowse link
G CYP19A1 cytochrome P450 family 19 subfamily A member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:32,074,260...32,164,926
Ensembl chr26:32,132,425...32,164,277 		JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,753,236...8,759,378
Ensembl chr26:8,753,327...8,759,384 		JBrowse link
G CYP1A2 cytochrome P450 family 1 subfamily A member 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,727,996...8,733,254 JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 sexual_dimorphism
susceptibility
severity
disease_progression 		ISO mRNA:splice variants:colorectal mucosa (human)
DNA:SNP:intron: (rs4809960) (human)
mRNA:increased expression:colorectal mucosa (human)
mRNA:increased expression:colorectum (human)
DNA:SNP:intron: (rs2765934) (human)
circRNA:increased expression:colorectum (human)
DNA:missense mutation:CDS: (rs6022990) (human)
mRNA:increased expression:colon (human)
DNA:SNP:enhancer: (rs6013897) (human) 		RGD PMID:20398751 PMID:23463632 PMID:24213465 PMID:24562971 PMID:26260259 More... RGD:11526316 RGD:151361180 RGD:151361186 RGD:151665172 RGD:151665178 RGD:151665339 RGD:151665496 RGD:151665501 RGD:151665788 RGD:151708714 NCBI chr 2:9,868,794...9,889,510
Ensembl chr 2:9,868,678...9,885,884 		JBrowse link
G CYP2E1 cytochrome P450 family 2 subfamily E member 1 ISO DNA:SNP:rs3813867 (human) RGD PMID:30489355 RGD:14700897 NCBI chr26:53,390,054...53,403,309
Ensembl chr26:53,390,089...53,404,211 		JBrowse link
G DAB2IP DAB2 interacting protein disease_progression
treatment 		ISO protein:decreased expression:colorectum (human)
human cells in mouse model 		RGD PMID:26564738 PMID:30974224 PMID:31081086 RGD:11556182 RGD:151665164 RGD:151665166 NCBI chr12:17,802,030...18,017,648
Ensembl chr12:17,801,831...17,830,890 		JBrowse link
G DAPK2 death associated protein kinase 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:19,492,112...19,637,453 JBrowse link
G DCC DCC netrin 1 receptor ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm OMIM
ClinVar		 PMID:25741868 PMID:28492532 NCBI chr18:27,437,224...28,623,717
Ensembl chr18:27,442,489...28,212,697 		JBrowse link
G DDR1 discoidin domain receptor tyrosine kinase 1 severity ISO protein:increased expression, increased phosphorylation:tumor cells (human)
mRNA:increased expression:colon (mouse) 		RGD PMID:29438985 PMID:30666650 RGD:151347685 RGD:151347840 NCBI chr17:41,564,271...41,583,404
Ensembl chr17:41,564,992...41,575,682 		JBrowse link
G DDR2 discoidin domain receptor tyrosine kinase 2 disease_progression ISO RGD PMID:28476831 RGD:150429706 NCBI chr20:1,298,636...1,451,872
Ensembl chr20:1,299,574...1,359,674 		JBrowse link
G DDX3X DEAD-box helicase 3 X-linked exacerbates
treatment
ameliorates 		ISO protein:increased expression:colorectum (human)
protein:increased expression:colorectum, nucleus (human)
human cells in mouse model 		RGD PMID:26087195 PMID:26892600 PMID:27007150 PMID:28761359 PMID:31391454 RGD:11096798 RGD:151356502 RGD:151356503 RGD:151356505 RGD:151356658 NCBI chr  X:38,513,251...38,539,982
Ensembl chr  Y:689,380...706,092 		JBrowse link
G DDX51 DEAD-box helicase 51 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr11:127,520,190...127,525,438
Ensembl chr11:127,520,489...127,525,412 		JBrowse link
G DENND4A DENN domain containing 4A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:17,789,429...17,921,400
Ensembl chr26:17,789,271...17,923,744 		JBrowse link
G DET1 DET1 partner of COP1 E3 ubiquitin ligase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:7,078,777...7,103,174
Ensembl chr29:7,078,578...7,096,486 		JBrowse link
G DICER1 dicer 1, ribonuclease III disease_progression
susceptibility 		ISO DNA:SNP: :rs3742330 A>G (human) RGD PMID:24649159 PMID:30833603 RGD:149735326 RGD:149735345 NCBI chr24:72,915,550...72,986,658
Ensembl chr24:72,915,499...72,963,006 		JBrowse link
G DIS3L DIS3 like exosome 3'-5' exoribonuclease ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:17,217,316...17,258,356
Ensembl chr26:17,216,558...17,257,942 		JBrowse link
G DISP2 dispatched RND transporter family member 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,644,040...42,658,280
Ensembl chr26:42,644,780...42,656,794 		JBrowse link
G DLC1 DLC1 Rho GTPase activating protein ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: DLC1-related condition
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: DLC1-related condition | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		OMIM
ClinVar		 PMID:9536098 PMID:17576681 PMID:24587289 PMID:25741868 PMID:28106320 More... NCBI chr 8:11,211,230...11,632,278 JBrowse link
G DLL4 delta like canonical Notch ligand 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,056,473...42,066,283
Ensembl chr26:42,056,331...42,065,828 		JBrowse link
G DMD dystrophin ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr  X:29,543,003...32,218,011 JBrowse link
G DMXL2 Dmx like 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:31,750,419...31,922,022
Ensembl chr26:31,750,403...31,922,208 		JBrowse link
G DNAAF4 dynein axonemal assembly factor 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:27,946,092...28,024,495 JBrowse link
G DNAJA4 DnaJ heat shock protein family (Hsp40) member A4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:5,054,934...5,072,510
Ensembl chr26:5,056,668...5,072,459 		JBrowse link
G DNAJC17 DnaJ heat shock protein family (Hsp40) member C17 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,193,826...42,238,883
Ensembl chr26:42,193,852...42,238,811 		JBrowse link
G DPH6 diphthamine biosynthesis 6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:47,360,989...47,799,830
Ensembl chr26:47,361,674...47,539,119 		JBrowse link
G DPP8 dipeptidyl peptidase 8 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,063,446...18,136,230
Ensembl chr26:18,063,488...18,138,964 		JBrowse link
G DPYD dihydropyrimidine dehydrogenase ISO protein:increased activity:liver RGD PMID:23197286 RGD:11251746 NCBI chr20:35,376,738...36,215,388
Ensembl chr20:35,377,266...36,215,679 		JBrowse link
G DSN1 DSN1 component of MIS12 kinetochore complex disease_progression ISO RGD PMID:27329586 RGD:27372885 NCBI chr 2:57,511,171...57,525,241
Ensembl chr 2:57,511,366...57,527,088 		JBrowse link
G DTWD1 DTW domain containing 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532
G DUOX1 dual oxidase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:38,038,093...38,073,993
Ensembl chr26:38,038,771...38,072,023 		JBrowse link
G DUOX2 dual oxidase 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:38,090,053...38,110,781
Ensembl chr26:38,090,648...38,109,636 		JBrowse link
G DUOXA1 dual oxidase maturation factor 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:38,074,870...38,084,943
Ensembl chr26:38,074,775...38,086,340 		JBrowse link
G DUOXA2 dual oxidase maturation factor 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:38,084,943...38,089,701
Ensembl chr26:38,086,092...38,089,420 		JBrowse link
G DUT deoxyuridine triphosphatase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:34,941,775...34,954,184
Ensembl chr26:34,940,702...34,953,166 		JBrowse link
G EDC3 enhancer of mRNA decapping 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,784,894...8,846,616
Ensembl chr26:8,784,944...8,844,576 		JBrowse link
G EEF1E1 eukaryotic translation elongation factor 1 epsilon 1 ISO protein:decreased expression:colorectum: RGD PMID:21789020 RGD:10401218 NCBI chr17:64,058,992...64,082,187
Ensembl chr17:64,059,011...64,082,586 		JBrowse link
G EEF2 eukaryotic translation elongation factor 2 ISO protein:increased expression:colon (human) RGD PMID:24589652 RGD:153297816 NCBI chr 6:3,733,056...3,742,526
Ensembl chr 6:3,732,425...3,742,826 		JBrowse link
G EFL1 elongation factor like GTPase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:1,134,150...1,270,216
Ensembl chr26:1,134,208...1,270,885 		JBrowse link
G EGFR epidermal growth factor receptor resistance ISO human tumor in mouse model
mRNA, protein:increased expression (human) 		RGD PMID:15269313 PMID:20010090 PMID:21398618 RGD:5131455 RGD:5131632 RGD:5131871 NCBI chr21:3,664,622...3,853,492
Ensembl chr21:3,666,339...3,853,239 		JBrowse link
G EHD4 EH domain containing 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:41,012,296...41,085,738
Ensembl chr26:41,012,991...41,089,182 		JBrowse link
G EID1 EP300 interacting inhibitor of differentiation 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:34,412,053...34,413,645
Ensembl chr26:34,413,000...34,413,566 		JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,966,095...43,072,083
Ensembl chr26:42,962,447...43,072,001 		JBrowse link
G EIF3J eukaryotic translation initiation factor 3 subunit J ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:38,481,842...38,505,762 JBrowse link
G EIF5A eukaryotic translation initiation factor 5A disease_progression ISO RGD PMID:23322277 RGD:151356994 NCBI chr16:6,685,908...6,691,159 JBrowse link
G ELL3 elongation factor for RNA polymerase II 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,268,461...39,273,833
Ensembl chr26:39,269,538...39,273,321 		JBrowse link
G EMC4 ER membrane protein complex subunit 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:48,673,792...48,678,869
Ensembl chr26:48,674,134...48,678,862 		JBrowse link
G EMC7 ER membrane protein complex subunit 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:48,804,520...48,822,904
Ensembl chr26:48,804,573...48,825,820 		JBrowse link
G EMX2 empty spiracles homeobox 2 ameliorates ISO human cells in mouse model RGD PMID:27712600 RGD:153323291 NCBI chr 9:110,347,043...110,353,647
Ensembl chr 9:110,347,379...110,353,643 		JBrowse link
G EP300 E1A binding protein p300 ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		OMIM
ClinVar		 PMID:15706485 PMID:18414213 PMID:24476420 PMID:24728327 PMID:25741868 More... NCBI chr19:23,634,132...23,726,095
Ensembl chr19:23,634,571...23,724,979 		JBrowse link
G EPB42 erythrocyte membrane protein band 4.2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,770,288...39,794,252
Ensembl chr26:39,770,664...39,794,173 		JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr16:66,435,488...66,464,993
Ensembl chr16:66,434,251...66,464,952 		JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 susceptibility ISO DNA:polymorphism:promoter:-782G>T (human) RGD PMID:18094435 RGD:2289977 NCBI chr10:97,099,090...98,281,697 JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit sexual_dimorphism ISO DNA:SNP:3'utr: (rs3212986) (human)
mRNA:increased expression:colorectum (human)
DNA:SNP:exon: (rs3212986) (human) 		RGD PMID:16951227 PMID:29151331 PMID:29516665 RGD:153344543 RGD:155260343 RGD:155260348 NCBI chr 6:38,857,067...38,900,177
Ensembl chr 6:38,854,803...38,872,967 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit ISO mRNA:increased expression:colorectum (human) RGD PMID:16951227 RGD:155260343 NCBI chr 6:38,804,296...38,823,229
Ensembl chr 6:38,801,423...38,823,073 		JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit ISO mRNA:increased expression:colorectum (human) RGD PMID:16951227 RGD:155260343 NCBI chr10:2,926,410...2,963,802
Ensembl chr10:2,926,350...2,963,823 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit ISO mRNA:increased expression:colorectum (human) RGD PMID:16951227 RGD:155260343 NCBI chr 5:13,378,282...13,410,307
Ensembl chr 5:13,378,401...13,406,541 		JBrowse link
G ERCC6L ERCC excision repair 6 like, spindle assembly checkpoint helicase exacerbates ISO mRNA, protein:increased expression:colorectum (human) RGD PMID:31289493 RGD:155598681 NCBI chr  X:62,013,003...62,061,669 JBrowse link
G ESR2 estrogen receptor 2 susceptibility ISO DNA:repeat:3' utr:g.dupCA (human) RGD PMID:21884200 RGD:7364791 NCBI chr24:41,426,333...41,513,802
Ensembl chr24:41,447,224...41,512,486 		JBrowse link
G ETFA electron transfer flavoprotein subunit alpha ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:6,970,593...7,075,077
Ensembl chr26:6,970,584...7,076,049 		JBrowse link
G EXD1 exonuclease 3'-5' domain containing 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:41,785,448...41,819,540 JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit disease_progression
no_association 		ISO DNA:SNP: :rs3757441 (human)
DNA:SNPs: :rs2302427, rs41277434, rs6958683 (human) 		RGD PMID:21539681 PMID:21926398 PMID:26871294 RGD:126779590 RGD:126779594 RGD:126781700 NCBI chr21:117,380,518...117,515,224
Ensembl chr21:117,380,361...117,421,573 		JBrowse link
G F7 coagulation factor VII ISO human protein in a rat model RGD PMID:19062044 RGD:11049532 NCBI chr 3:91,109,864...91,122,707
Ensembl chr 3:91,110,380...91,123,327 		JBrowse link
G FAH fumarylacetoacetate hydrolase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:3,223,327...3,259,367
Ensembl chr26:3,223,079...3,258,657 		JBrowse link
G FAM219B family with sequence similarity 219 member B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,564,756...8,572,391
Ensembl chr26:8,565,096...8,569,808 		JBrowse link
G FAM227B family with sequence similarity 227 member B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:33,510,707...33,973,965 JBrowse link
G FAM81A family with sequence similarity 81 member A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:23,980,938...24,070,036
Ensembl chr26:23,980,942...24,050,166 		JBrowse link
G FAM98B family with sequence similarity 98 member B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:44,484,020...44,523,548 JBrowse link
G FAN1 FANCD2 and FANCI associated nuclease 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:22561515 PMID:25992589 PMID:26493165 PMID:28492532 NCBI chr26:51,720,822...51,759,652
Ensembl chr26:51,725,017...51,759,413 		JBrowse link
G FANCI FA complementation group I ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:25741868 PMID:28492532 NCBI chr29:7,788,983...7,864,505
Ensembl chr29:7,790,458...7,855,552 		JBrowse link
G FASN fatty acid synthase ISO mRNA,protein:increased expression:colorectum: RGD PMID:32525817 RGD:153350127 NCBI chr16:73,988,410...74,008,374
Ensembl chr16:73,982,899...74,006,551 		JBrowse link
G FAT1 FAT atypical cadherin 1 sexual_dimorphism ISO left-sided colorectal cancer;DNA:mutations:multiple (human) RGD PMID:33106877 RGD:150539450 NCBI chr 7:132,475,689...132,616,151
Ensembl chr 7:132,483,032...132,616,112 		JBrowse link
G FBN1 fibrillin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:34,637,916...34,877,499
Ensembl chr26:34,638,838...34,879,217 		JBrowse link
G FBRSL1 fibrosin like 1 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr11:127,840,826...127,936,739 JBrowse link
G FBXL22 F-box and leucine rich repeat protein 22 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:19,937,405...19,944,579 JBrowse link
G FBXO22 F-box protein 22 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:7,357,813...7,387,344
Ensembl chr26:7,356,064...7,387,274 		JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr 7:98,894,261...99,105,955
Ensembl chr 7:98,892,504...99,106,084 		JBrowse link
G FEM1B fem-1 homolog B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:15,183,965...15,201,394 JBrowse link
G FGF7 fibroblast growth factor 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:33,802,349...33,867,743
Ensembl chr26:33,802,328...33,867,333 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr 9:114,234,344...114,354,736
Ensembl chr 9:114,234,250...114,354,704 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 ISO ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		OMIM
ClinVar		 PMID:1908846 PMID:7647778 PMID:7649548 PMID:7670477 PMID:7702086 More... NCBI chr27:46,958,444...46,974,032
Ensembl chr27:46,957,254...46,973,392 		JBrowse link
G FGFR4 fibroblast growth factor receptor 4 ISO protein:increased expression:colorectum (human) RGD PMID:24503538 RGD:150520155 NCBI chr23:79,095,031...79,106,018
Ensembl chr23:79,097,429...79,105,456 		JBrowse link
G FLCN folliculin ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		OMIM
ClinVar		 PMID:9536098 PMID:12204536 PMID:12471204 PMID:12843323 PMID:15852235 More... NCBI chr16:16,245,840...16,271,465
Ensembl chr16:16,245,715...16,267,698 		JBrowse link
G FLT4 fms related receptor tyrosine kinase 4 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar PMID:11807987 PMID:25741868 PMID:28492532 NCBI chr23:82,328,257...82,373,785
Ensembl chr23:82,328,258...82,357,044 		JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit ISO MRNA, protein:increased expression:colon (human)
mRNA:increased expression:colon (human) 		RGD PMID:30114390 PMID:35034245 RGD:153344553 RGD:153344554 NCBI chr14:79,201,128...79,222,363
Ensembl chr14:79,201,649...79,222,373 		JBrowse link
G FOXA1 forkhead box A1 disease_progression ISO RGD PMID:27484093 PMID:31081047 RGD:151665746 RGD:151665754 NCBI chr24:14,397,759...14,403,078
Ensembl chr24:14,396,702...14,403,094 		JBrowse link
G FOXB1 forkhead box B1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:23,502,048...23,505,390
Ensembl chr26:23,503,545...23,504,522 		JBrowse link
G FOXP3 forkhead box P3 ISO DNA:hypomethylation:colorectum RGD PMID:24291052 RGD:38599002 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FRMD5 FERM domain containing 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:38,847,310...39,179,487
Ensembl chr26:39,119,525...39,170,954 		JBrowse link
G FSD2 fibronectin type III and SPRY domain containing 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:2,848,391...2,898,644
Ensembl chr29:2,867,030...2,897,780 		JBrowse link
G FSIP1 fibrous sheath interacting protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:43,220,918...43,605,506
Ensembl chr26:43,227,795...43,407,241 		JBrowse link
G FZD3 frizzled class receptor 3 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr 8:26,598,544...26,668,983
Ensembl chr 8:26,598,610...26,667,543 		JBrowse link
G GABPB1 GA binding protein transcription factor subunit beta 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:32,967,912...33,039,114
Ensembl chr26:33,008,209...33,039,689 		JBrowse link
G GAD1 glutamate decarboxylase 1 severity ISO mRNA:increased expression:colon (human) RGD PMID:26549033 RGD:151356759 NCBI chr10:56,351,495...56,396,476
Ensembl chr10:56,353,253...56,396,524 		JBrowse link
G GALK2 galactokinase 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:33,973,843...34,136,345
Ensembl chr26:33,969,657...34,122,115 		JBrowse link
G GALNT12 polypeptide N-acetylgalactosaminyltransferase 12 susceptibility ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer
ClinVar Annotator: match by term: Colorectal cancer 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: AURKA-related condition | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: GALNT12-related condition
ClinVar Annotator: match by term: Colorectal cancer 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: DLC1-related condition | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: GALNT12-related condition | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: GALNT12-related condition | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		OMIM
ClinVar		 PMID:9536098 PMID:16199547 PMID:17576681 PMID:19617566 PMID:20551049 More... NCBI chr12:40,576,628...40,619,747
Ensembl chr12:40,576,594...40,619,697 		JBrowse link
G GANC glucosidase alpha, neutral C ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:40,670,906...40,721,381 JBrowse link
G GATA1 GATA binding protein 1 disease_progression ISO RGD PMID:31069596 RGD:149735196 NCBI chr  X:45,912,638...45,920,415
Ensembl chr  X:45,917,231...45,920,268 		JBrowse link
G GATM glycine amidinotransferase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:37,836,207...37,853,811
Ensembl chr26:37,836,335...37,852,822 		JBrowse link
G GCHFR GTP cyclohydrolase I feedback regulator ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,238,875...42,243,230
Ensembl chr26:42,239,390...42,243,117 		JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit ISO mRNA:increased expression:colon: RGD PMID:8705999 RGD:11049536 NCBI chr17:19,012,994...19,060,617
Ensembl chr17:19,013,026...19,060,659 		JBrowse link
G GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:23,886,782...23,893,201
Ensembl chr26:23,887,297...23,888,613 		JBrowse link
G GDPGP1 GDP-D-glucose phosphorylase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:8,785,034...8,789,083
Ensembl chr29:8,787,912...8,789,069 		JBrowse link
G GJD2 gap junction protein delta 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:48,149,568...48,152,466
Ensembl chr26:48,149,755...48,153,660 		JBrowse link
G GLCE glucuronic acid epimerase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:14,181,625...14,295,414
Ensembl chr26:14,184,606...14,295,372 		JBrowse link
G GLDN gliomedin ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:31,966,166...32,034,236
Ensembl chr26:31,966,961...32,034,016 		JBrowse link
G GLI1 GLI family zinc finger 1 ISO RGD PMID:22901214 RGD:150520174 NCBI chr11:53,371,929...53,384,339
Ensembl chr11:53,375,558...53,385,269 		JBrowse link
G GNB5 G protein subunit beta 5 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr26:31,209,843...31,265,440
Ensembl chr26:31,209,896...31,266,873 		JBrowse link
G GOLM2 golgi membrane protein 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:38,640,461...38,762,865
Ensembl chr26:38,639,819...38,762,847 		JBrowse link
G GPR176 G protein-coupled receptor 176 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:43,085,416...43,205,075 JBrowse link
G GPX1 glutathione peroxidase 1 susceptibility ISO mRNA:decreased expression:colorectum (human)
DNA:missense mutation:CDS:p.P198L (human) 		RGD PMID:19428376 PMID:25550558 RGD:152023636 RGD:152023662 NCBI chr22:10,754,976...10,756,617 JBrowse link
G GPX2 glutathione peroxidase 2 disease_progression ISO protein:increased expression:large intestine (human) RGD PMID:18479189 RGD:152998902 NCBI chr24:42,151,205...42,155,335 JBrowse link
G GPX4 glutathione peroxidase 4 susceptibility ISO DNA:silent mutation:CDS: (rs713041) (human) RGD PMID:20378690 RGD:152995451 NCBI chr 6:873,867...876,225 JBrowse link
G GRAMD2A GRAM domain containing 2A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:11,255,629...11,299,132
Ensembl chr26:11,256,792...11,300,174 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:22561515 PMID:25741868 PMID:25992589 PMID:26493165 PMID:26947005 More... NCBI chr26:50,152,097...50,169,760 JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A sexual_dimorphism ISO right-sided colorectal cancer;DNA:mutations:multiple (human)
DNA:hypermethylation:promoter (human) 		RGD PMID:17922030 PMID:33106877 RGD:150539450 RGD:150539451 NCBI chr 5:9,233,028...9,707,322
Ensembl chr 5:9,286,775...9,462,828 		JBrowse link
G GRP gastrin releasing peptide ISO protein:increased expression:serum (human) RGD PMID:30146822 RGD:401700396 NCBI chr18:20,496,201...20,508,551
Ensembl chr18:20,496,516...20,507,153 		JBrowse link
G GTF2A2 general transcription factor IIA subunit 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:23,850,483...23,868,477 JBrowse link
G HACD3 3-hydroxyacyl-CoA dehydratase 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,002,618...18,050,302
Ensembl chr26:18,004,586...18,050,258 		JBrowse link
G HAPLN3 hyaluronan and proteoglycan link protein 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:7,419,345...7,456,484
Ensembl chr29:7,419,329...7,439,666 		JBrowse link
G HAUS2 HAUS augmin like complex subunit 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:40,409,749...40,427,544
Ensembl chr26:40,410,167...40,427,531 		JBrowse link
G HCN4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:10,107,342...10,158,885
Ensembl chr26:10,110,579...10,156,292 		JBrowse link
G HDAC1 histone deacetylase 1 ISO mRNA:increased expression:colon: RGD PMID:23724067 RGD:9590193 NCBI chr20:100,529,782...100,575,953
Ensembl chr20:100,530,369...100,558,556 		JBrowse link
G HDAC3 histone deacetylase 3 ISO mRNA:increased expression:colon: RGD PMID:23724067 RGD:9590193 NCBI chr23:44,246,296...44,263,127 JBrowse link
G HDAC5 histone deacetylase 5 ISO mRNA:increased expression:colon: RGD PMID:23724067 RGD:9590193 NCBI chr16:62,267,837...62,314,914
Ensembl chr16:62,274,041...62,315,094 		JBrowse link
G HDAC7 histone deacetylase 7 ISO mRNA:increased expression:colon: RGD PMID:23724067 RGD:9590193 NCBI chr11:44,002,616...44,040,766
Ensembl chr11:44,003,736...44,039,902 		JBrowse link
G HDC histidine decarboxylase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:33,051,048...33,074,872
Ensembl chr26:33,051,966...33,074,563 		JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr26:19,713,780...19,930,807
Ensembl chr26:19,713,617...19,930,937 		JBrowse link
G HEXA hexosaminidase subunit alpha ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:11,081,985...11,130,366
Ensembl chr26:11,082,468...11,116,075 		JBrowse link
G HFE homeostatic iron regulator susceptibility ISO DNA:missense mutation, haplotype:cds:p.C282Y (human) RGD PMID:10383894 RGD:8694350 NCBI chr17:46,159,770...46,168,831
Ensembl chr17:46,156,685...46,164,649 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ameliorates ISO human cells in mouse model RGD PMID:30789971 RGD:151893289 NCBI chr24:38,873,830...38,927,657
Ensembl chr24:38,873,861...38,928,288 		JBrowse link
G HILPDA hypoxia inducible lipid droplet associated disease_progression ISO human cells in mouse model
mRNA:increased expression:colon (human) 		RGD PMID:23916472 RGD:153344575 NCBI chr21:97,254,246...97,257,186 JBrowse link
G HK1 hexokinase 1 ISO RGD PMID:19877886 RGD:11353883 NCBI chr 9:61,917,501...62,029,737
Ensembl chr 9:61,917,440...62,001,843 		JBrowse link
G HMG20A high mobility group 20A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:5,821,356...5,891,592
Ensembl chr26:5,821,105...5,848,688 		JBrowse link
G HNF1A HNF1 homeobox A treatment ISO DNA:SNPs:multiple (human)
RNA:increased expression:colon (human) 		RGD PMID:27433921 PMID:29066969 RGD:150540313 RGD:150540315 NCBI chr11:116,334,935...116,358,582
Ensembl chr11:116,335,675...116,357,751 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K severity ISO protein:increased expression:colonic epithelium, cytoplasm (human) RGD PMID:21194727 RGD:9999439 NCBI chr12:94,768,403...94,789,957
Ensembl chr12:94,768,480...94,789,743 		JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U ISO protein:decreased expression:colonic epithelium, nucleus (human) RGD PMID:21194727 RGD:9999439 NCBI chr25:81,879,532...81,890,684
Ensembl chr25:81,878,111...81,890,701 		JBrowse link
G HOMER2 homer scaffold protein 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:2,667,718...2,810,238
Ensembl chr29:2,706,134...2,803,372 		JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 disease_progression ISO protein: increased expression: serum RGD PMID:19578980 RGD:6480104 NCBI chr 1:114,447,348...114,452,693
Ensembl chr 1:114,446,544...114,451,562 		JBrowse link
G HTRA1 HtrA serine peptidase 1 exacerbates ISO mRNA, protein:increased expression,decreased expression:colorectal mucosa (human)
protein:decreased expression:colonic epithelium,colonic mucosa (human) 		RGD PMID:28586045 PMID:32486357 RGD:152977762 RGD:152985530 NCBI chr 9:115,197,543...115,250,092
Ensembl chr 9:115,197,566...115,253,919 		JBrowse link
G HTRA2 HtrA serine peptidase 2 exacerbates ISO protein:decreased expression:colorectal mucosa (human) RGD PMID:32486357 RGD:152977762 NCBI chr14:32,745,436...32,749,176
Ensembl chr14:32,743,708...32,748,577 		JBrowse link
G HYKK hydroxylysine kinase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:4,802,764...4,836,992
Ensembl chr26:4,808,554...4,836,290 		JBrowse link
G HYPK huntingtin interacting protein K ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,242,584...39,244,681 JBrowse link
G ICE2 interactor of little elongation complex ELL subunit 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:23,011,228...23,068,134
Ensembl chr26:23,011,498...23,063,733 		JBrowse link
G IDH3A isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:5,183,470...5,205,385
Ensembl chr26:5,184,991...5,205,384 		JBrowse link
G IER2 immediate early response 2 ISO DNA:hypomethylation:promoter (human) RGD PMID:34311674 RGD:153323328 NCBI chr 6:11,834,998...11,838,421
Ensembl chr 6:11,836,706...11,837,377 		JBrowse link
G IGDCC3 immunoglobulin superfamily DCC subclass member 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,203,230...18,254,349
Ensembl chr26:18,203,479...18,252,581 		JBrowse link
G IGDCC4 immunoglobulin superfamily DCC subclass member 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,158,815...18,203,021
Ensembl chr26:18,158,859...18,197,109 		JBrowse link
G IGF2 insulin like growth factor 2 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr 1:1,937,414...1,951,238
Ensembl chr 1:1,936,830...1,945,388 		JBrowse link
G IKBKG inhibitor of nuclear factor kappa B kinase regulatory subunit gamma ISO RGD PMID:28502111 RGD:153305906 NCBI chr  X:128,781,975...128,816,039
Ensembl chr  X:128,787,785...128,806,083 		JBrowse link
G IKZF1 IKAROS family zinc finger 1 severity
disease_progression
susceptibility
exacerbates 		ISO DNA:polymorphisms: (human)
DNA:hypermethylation:promoter (human)
DNA:hypermethylation: (human)
DNA:SNP:3' utr: (rs6964823) (human) 		RGD PMID:21737484 PMID:25928810 PMID:27726312 PMID:29780264 PMID:29796114 More... RGD:150540317 RGD:150540318 RGD:150540319 RGD:150540320 RGD:150540321 RGD:150540322 RGD:150540323 RGD:150540325 RGD:150540327 RGD:150540328 RGD:150540329 RGD:151347633 NCBI chr21:8,398,902...8,500,431
Ensembl chr21:8,402,719...8,484,723 		JBrowse link
G IL16 interleukin 16 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:2,080,985...2,208,764
Ensembl chr26:2,077,228...2,208,431 		JBrowse link
G IL6 interleukin 6 ISO DNA:SNP:promoter:-174G>C (human) RGD PMID:28349833 RGD:14975287 NCBI chr21:35,577,513...35,582,385
Ensembl chr21:35,577,939...35,582,237 		JBrowse link
G IMP3 IMP U3 small nucleolar ribonucleoprotein 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:7,793,302...7,794,976
Ensembl chr26:7,793,899...7,794,453 		JBrowse link
G INO80 INO80 complex ATPase subunit ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:41,878,648...42,017,526
Ensembl chr26:41,898,723...42,017,736 		JBrowse link
G INSYN1 inhibitory synaptic factor 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:9,736,631...9,749,169
Ensembl chr26:9,737,950...9,749,062 		JBrowse link
G INTS14 integrator complex subunit 14 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:17,969,545...18,002,216
Ensembl chr26:17,969,771...18,005,020 		JBrowse link
G IQCH IQ motif containing H ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:15,997,491...16,250,187
Ensembl chr26:15,998,540...16,250,203 		JBrowse link
G IQGAP1 IQ motif containing GTPase activating protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:9,363,273...9,485,644
Ensembl chr29:9,362,926...9,485,526 		JBrowse link
G IREB2 iron responsive element binding protein 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:4,842,328...4,905,941
Ensembl chr26:4,842,122...4,905,964 		JBrowse link
G IRS4 insulin receptor substrate 4 disease_progression ISO protein:increased expression:colorectum (human)
protein:increased expression:colorectal mucosa (human) 		RGD PMID:29185229 PMID:29353348 PMID:30410539 RGD:151347867 RGD:151347868 RGD:151347869 NCBI chr  X:96,589,292...96,605,715
Ensembl chr  X:96,601,944...96,605,699 		JBrowse link
G ISG20 interferon stimulated exonuclease gene 20 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:7,178,118...7,195,460
Ensembl chr29:7,178,769...7,196,387 		JBrowse link
G ISL2 ISL LIM homeobox 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:6,940,218...6,946,007
Ensembl chr26:6,940,850...6,945,786 		JBrowse link
G ISLR immunoglobulin superfamily containing leucine rich repeat ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:9,313,819...9,316,785
Ensembl chr26:9,314,572...9,315,858 		JBrowse link
G ISLR2 immunoglobulin superfamily containing leucine rich repeat 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:9,352,549...9,362,050
Ensembl chr26:9,352,472...9,358,304 		JBrowse link
G ITGA11 integrin subunit alpha 11 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:15,045,728...15,178,151
Ensembl chr26:15,046,058...15,176,837 		JBrowse link
G ITPKA inositol-trisphosphate 3-kinase A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:41,502,417...41,512,131 JBrowse link
G IVD isovaleryl-CoA dehydrogenase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,592,387...42,605,931
Ensembl chr26:42,589,709...42,606,199 		JBrowse link
G JAK1 Janus kinase 1 disease_progression
severity 		ISO DNA:frameshift mutations RGD PMID:28539123 PMID:29121062 RGD:150524355 RGD:18936998 NCBI chr20:68,122,134...68,253,361
Ensembl chr20:68,122,173...68,252,042 		JBrowse link
G JMJD7 jumonji domain containing 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:41,148,280...41,158,744 JBrowse link
G JUNB JunB proto-oncogene, AP-1 transcription factor subunit ISO associated with ulcerative colitis;protein:increased expression:colonic mucosa (human) RGD PMID:33299340 RGD:151347858 NCBI chr 6:11,479,108...11,480,942
Ensembl chr 6:11,479,407...11,480,450 		JBrowse link
G KATNBL1 katanin regulatory subunit B1 like 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:48,693,622...48,765,021
Ensembl chr26:48,693,671...48,763,349 		JBrowse link
G KBTBD13 kelch repeat and BTB domain containing 13 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:25741868 PMID:28492532 NCBI chr26:18,507,709...18,511,025
Ensembl chr26:18,509,555...18,510,931 		JBrowse link
G KCNB2 potassium voltage-gated channel subfamily B member 2 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr 8:68,165,879...68,538,285 JBrowse link
G KDM3B lysine demethylase 3B severity ISO protein:decreased expression:colon mucosa (human) RGD PMID:22345654 RGD:9586735 NCBI chr23:41,027,490...41,111,560
Ensembl chr23:41,062,020...41,112,469 		JBrowse link
G KDM4B lysine demethylase 4B treatment ISO human gene in a mouse model RGD PMID:24473398 RGD:9587755 NCBI chr 6:4,649,140...4,831,634
Ensembl chr 6:4,649,221...4,831,636 		JBrowse link
G KDM5C lysine demethylase 5C ISO mRNA:increased expression:colorectum (human) RGD PMID:32552762 RGD:151361177 NCBI chr  X:49,306,472...49,356,151
Ensembl chr  X:49,321,173...49,356,100 		JBrowse link
G KDM6A lysine demethylase 6A ameliorates ISO human cells in a mouse model RGD PMID:31139021 RGD:150429740 NCBI chr  X:42,053,272...42,291,013
Ensembl chr  X:42,053,336...42,290,526 		JBrowse link
G KDR kinase insert domain receptor treatment
no_association 		ISO DNA:SNPs:promoter:rs10013228, rs2071559 (human)
DNA:SNPs:exons:rs1870377, rs2305948 (human) 		RGD PMID:22182247 RGD:126848807 NCBI chr 7:13,435,059...13,482,236
Ensembl chr 7:13,435,096...13,482,771 		JBrowse link
G KIF18A kinesin family member 18A disease_progression ISO RGD PMID:21213216 RGD:11554203 NCBI chr 1:37,003,325...37,088,705
Ensembl chr 1:37,003,357...37,088,640 		JBrowse link
G KIF23 kinesin family member 23 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:14,008,717...14,044,272
Ensembl chr26:14,008,633...14,043,710 		JBrowse link
G KIF2C kinesin family member 2C disease_progression ISO RGD PMID:18506187 RGD:27372891 NCBI chr20:88,023,250...88,054,715
Ensembl chr20:88,023,207...88,055,176 		JBrowse link
G KIF7 kinesin family member 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:8,172,294...8,193,775
Ensembl chr29:8,170,883...8,191,323 		JBrowse link
G KLF13 KLF transcription factor 13 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:22561515 PMID:25992589 PMID:26493165 PMID:28492532 NCBI chr26:51,308,233...51,359,433
Ensembl chr26:51,313,743...51,359,340 		JBrowse link
G KLHL25 kelch like family member 25 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:4,376,292...4,412,778
Ensembl chr29:4,385,011...4,386,780 		JBrowse link
G KNL1 kinetochore scaffold 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,342,741...42,409,466 JBrowse link
G KNSTRN kinetochore localized astrin (SPAG5) binding protein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,620,401...42,631,932
Ensembl chr26:42,621,084...42,631,822 		JBrowse link
G KRAS KRAS proto-oncogene, GTPase disease_progression ISO DNA:missense mutations:cds:p.GLY12ASP,GLY12Val,GLY13ALA,GLY13ASP(human) RGD PMID:22971512 RGD:14398748 NCBI chr11:24,963,396...25,010,747
Ensembl chr11:24,973,619...25,005,191 		JBrowse link
G KRT20 keratin 20 disease_progression ISO RGD PMID:23322277 RGD:151356994 NCBI chr16:65,296,604...65,307,912
Ensembl chr16:65,298,642...65,311,645 		JBrowse link
G L1CAM L1 cell adhesion molecule severity ISO protein:increased expression:colon (human) RGD PMID:17873897 RGD:6483011 NCBI chr  X:128,285,128...128,309,173
Ensembl chr  X:128,285,130...128,299,570 		JBrowse link
G LACTB lactamase beta ISO ClinVar Annotator: match by term: BUB1-related condition ClinVar PMID:28492532 NCBI chr26:20,399,882...20,419,422
Ensembl chr26:20,399,858...20,419,369 		JBrowse link
G LARP6 La ribonucleoprotein 6, translational regulator ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:12,605,050...12,626,661
Ensembl chr26:12,605,147...12,628,761 		JBrowse link
G LATS2 large tumor suppressor kinase 2 treatment ISO Human cells in mouse model RGD PMID:32682784 RGD:153297782 NCBI chr 3:124,520...215,426 JBrowse link
G LCMT2 leucine carboxyl methyltransferase 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,670,087...39,672,753
Ensembl chr26:39,670,106...39,672,163 		JBrowse link
G LCTL lactase like ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:16,980,318...17,001,238
Ensembl chr26:16,981,618...17,001,333 		JBrowse link
G LDHAL6B lactate dehydrogenase A like 6B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:24,304,857...24,307,906
Ensembl chr26:24,305,289...24,306,434 		JBrowse link
G LEO1 LEO1 homolog, Paf1/RNA polymerase II complex component ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:31,405,019...31,444,350
Ensembl chr26:31,404,537...31,445,198 		JBrowse link
G LIF LIF interleukin 6 family cytokine disease_progression ISO protein:increased expression:colon (human) RGD PMID:29899555 RGD:151356919 NCBI chr19:13,121,261...13,127,663
Ensembl chr19:13,121,297...13,127,679 		JBrowse link
G LIG4 DNA ligase 4 ISO DNA, mRNA:hypermethylation, decreased expression RGD PMID:24282031 RGD:8694072 NCBI chr 3:86,576,200...86,587,097
Ensembl chr 3:86,577,304...86,580,039 		JBrowse link
G LINC02694 long intergenic non-protein coding RNA 2694 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:44,271,099...44,275,832 JBrowse link
G LINGO1 leucine rich repeat and Ig domain containing 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:5,485,059...5,690,531
Ensembl chr26:5,688,293...5,690,155 		JBrowse link
G LIPC lipase C, hepatic type ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:24,946,843...25,109,338
Ensembl chr26:24,946,673...25,087,921 		JBrowse link
G LMAN1L lectin, mannose binding 1 like ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,645,361...8,659,139
Ensembl chr26:8,646,256...8,658,576 		JBrowse link
G LOC103224275 glutathione S-transferase Mu 1 no_association
disease_progression 		ISO DNA:deletion
DNA:CNVs 		RGD PMID:10445390 PMID:22234881 PMID:26406947 PMID:27893202 RGD:11353274 RGD:14700954 RGD:14700958 RGD:14700961 NCBI chr20:23,854,969...23,861,634 JBrowse link
G LOC103231165 isocitrate dehydrogenase (NADP(+)) 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:8,633,429...8,650,744
Ensembl chr29:8,633,715...8,650,657 		JBrowse link
G LOC103233018 liver carboxylesterase 1 severity
treatment 		ISO associated with obesity;mRNA:increased expression:tumor (human)
human cells in mouse model 		RGD PMID:33878036 RGD:152995285 NCBI chr 5:41,710,500...41,745,483 JBrowse link
G LOC103233229 cadherin-1 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr 5:58,578,244...58,679,677
Ensembl chr 5:58,578,146...58,679,541 		JBrowse link
G LOC103237529 adhesion G protein-coupled receptor B1 ISO mRNA:decreased expression:colorectum RGD PMID:9772287 RGD:13831353 NCBI chr 8:136,704,318...136,784,581
Ensembl chr 8:136,704,341...136,783,991 		JBrowse link
G LOC103238406 cyclic AMP-dependent transcription factor ATF-7 disease_progression ISO RGD PMID:26148593 RGD:11055686 NCBI chr11:49,608,653...49,728,702
Ensembl chr11:49,618,136...49,728,289 		JBrowse link
G LOC103239431 E1A-binding protein p400 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr11:127,335,371...127,461,564
Ensembl chr11:127,335,492...127,461,796 		JBrowse link
G LOC103242154 transient receptor potential cation channel subfamily V member 3 ISO DNA:snp:exon:c.558A>C rs11078458 (human) RGD PMID:20042636 RGD:7183081 NCBI chr16:2,975,771...3,062,952
Ensembl chr16:3,019,602...3,059,594 		JBrowse link
G LOC103245213 transmembrane channel-like protein 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:2,018,238...2,059,627
Ensembl chr26:2,018,612...2,059,328 		JBrowse link
G LOC103245341 coiled-coil domain-containing protein 33 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:9,153,498...9,251,614 JBrowse link
G LOC103245347 golgin subfamily A member 6C ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:9,399,054...9,420,493 JBrowse link
G LOC103245370 golgin subfamily A member 6C ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:10,815,869...10,828,604 JBrowse link
G LOC103245735 stereocilin ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,376,441...39,397,613
Ensembl chr26:39,378,318...39,401,072 		JBrowse link
G LOC103245846 chromosome 26 C15orf56 homolog ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,762,107...42,763,512 JBrowse link
G LOC103245858 chromosome 26 C15orf54 homolog ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:43,742,500...43,759,370 JBrowse link
G LOC103245928 rho GTPase-activating protein 11B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:22561515 PMID:25992589 PMID:26493165 PMID:28492532 NCBI chr26:50,246,538...50,269,273
Ensembl chr26:50,245,229...50,269,418 		JBrowse link
G LOC103246095 creatine kinase U-type, mitochondrial ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr26:39,397,797...39,401,046 JBrowse link
G LOX lysyl oxidase severity ISO RGD PMID:21282564 RGD:150520218 NCBI chr23:25,158,458...25,172,763
Ensembl chr23:25,157,269...25,172,757 		JBrowse link
G LOXL1 lysyl oxidase like 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:9,539,383...9,565,082
Ensembl chr26:9,538,758...9,564,751 		JBrowse link
G LPCAT4 lysophosphatidylcholine acyltransferase 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:48,420,011...48,546,667
Ensembl chr26:48,538,892...48,548,648 		JBrowse link
G LRCOL1 leucine rich colipase like 1 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr11:127,947,670...127,956,474 JBrowse link
G LRP1B LDL receptor related protein 1B exacerbates ISO DNA:mutations, haplotype:multiple: (human)
DNA:mutations, hpalotype:multiple (human) 		RGD PMID:31693169 PMID:33836681 RGD:150429788 RGD:150429790 NCBI chr10:25,611,400...27,511,903
Ensembl chr10:25,616,590...26,609,111 		JBrowse link
G LRRC49 leucine rich repeat containing 49 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:12,405,249...12,568,597
Ensembl chr26:12,405,721...12,567,987 		JBrowse link
G LRRC57 leucine rich repeat containing 57 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:40,427,588...40,434,108
Ensembl chr26:40,427,887...40,432,553 		JBrowse link
G LTK leukocyte receptor tyrosine kinase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:41,489,867...41,502,314
Ensembl chr26:41,490,902...41,501,956 		JBrowse link
G LYSMD2 LysM domain containing 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:31,624,953...31,652,483
Ensembl chr26:31,637,208...31,652,547 		JBrowse link
G MAN2C1 mannosidase alpha class 2C member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,061,643...8,074,157
Ensembl chr26:8,061,681...8,074,043 		JBrowse link
G MAP1A microtubule associated protein 1A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,469,013...39,489,666
Ensembl chr26:39,468,222...39,489,613 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:17,059,122...17,168,787
Ensembl chr26:17,060,054...17,168,782 		JBrowse link
G MAP2K2 mitogen-activated protein kinase kinase 2 ISO mRNA:decreased expression:colorectum (human) RGD PMID:28000901 RGD:150530480 NCBI chr 6:3,848,441...3,881,367
Ensembl chr 6:3,848,401...3,881,412 		JBrowse link
G MAP2K4 mitogen-activated protein kinase kinase 4 severity
ameliorates 		ISO protein:decreased expression:colorectum (human)
DNA:SNPs:promoter: -1304G>G, -1304T>G (rs3826392) (human) 		RGD PMID:19610067 PMID:28423721 RGD:150429743 RGD:150429744 NCBI chr16:11,366,610...11,485,411
Ensembl chr16:11,366,751...11,486,125 		JBrowse link
G MAP2K5 mitogen-activated protein kinase kinase 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:15,694,760...15,956,814
Ensembl chr26:15,693,811...15,956,918 		JBrowse link
G MAP3K8 mitogen-activated protein kinase kinase kinase 8 disease_progression ISO RGD PMID:23322277 PMID:29763718 RGD:151356994 RGD:151356995
G MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 exacerbates ISO mRNA:increased expression:colorectum (human)
mRNA:splicing variants:colorectum (human)
mRNA, protein:increased expression:colorectum, lymph node, blood serum (human)
protein:increased expression:colorectum (human) 		RGD PMID:20077526 PMID:25602366 PMID:27882171 PMID:29138007 RGD:151347675 RGD:151347676 RGD:151347679 RGD:151347680 NCBI chr14:5,391,416...5,579,163
Ensembl chr14:5,391,449...5,583,916 		JBrowse link
G MAPDA N6-Methyl-AMP deaminase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,648,164...39,669,734 JBrowse link
G MAPK14 mitogen-activated protein kinase 14 exacerbates ISO associated with experimental colitis RGD PMID:22828150 RGD:151665346 NCBI chr17:36,012,164...36,095,542
Ensembl chr17:36,014,454...36,095,138 		JBrowse link
G MAPK6 mitogen-activated protein kinase 6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:31,320,025...31,365,599
Ensembl chr26:31,321,281...31,339,672 		JBrowse link
G MAPK9 mitogen-activated protein kinase 9 treatment ISO RGD PMID:25205654 RGD:13217416 NCBI chr23:81,965,330...82,026,414
Ensembl chr23:81,963,899...82,013,659 		JBrowse link
G MAPKBP1 mitogen-activated protein kinase binding protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:41,159,788...41,213,045
Ensembl chr26:41,158,126...41,211,205 		JBrowse link
G MCC MCC regulator of WNT signaling pathway ISO OMIM NCBI chr23:16,309,574...16,773,736
Ensembl chr23:16,310,968...16,579,343 		JBrowse link
G MCL1 MCL1 apoptosis regulator, BCL2 family member disease_progression ISO DNA:SNP:promoter: (rs9803935) (human)
mRNA,protein:increased expression:colon (human) 		RGD PMID:29899555 PMID:32619164 RGD:151356738 RGD:151356919
G MEGF11 multiple EGF like domains 11 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:17,297,066...17,675,888 JBrowse link
G MEIS2 Meis homeobox 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:45,844,214...46,054,325 JBrowse link
G MESD mesoderm development LRP chaperone ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:2,402,719...2,413,682
Ensembl chr26:2,402,709...2,416,923 		JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:8,286,551...8,288,777
Ensembl chr29:8,286,828...8,287,918 		JBrowse link
G MESP2 mesoderm posterior bHLH transcription factor 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:8,313,022...8,316,116 JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr21:85,370,574...85,486,405
Ensembl chr21:85,397,645...85,488,093 		JBrowse link
G MEX3B mex-3 RNA binding family member B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:1,366,900...1,371,243
Ensembl chr26:1,366,815...1,371,193 		JBrowse link
G MFAP1 microfibril associated protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,220,477...39,239,964
Ensembl chr26:39,220,221...39,240,532 		JBrowse link
G MFGE8 milk fat globule EGF and factor V/VIII domain containing ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532
G MGA MAX dimerization protein MGA ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:41,215,424...41,381,828
Ensembl chr26:41,218,082...41,311,526 		JBrowse link
G MINAR1 membrane integral NOTCH2 associated receptor 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:3,916,183...3,958,664
Ensembl chr26:3,920,064...3,932,619 		JBrowse link
G MINDY2 MINDY lysine 48 deubiquitinase 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:24,662,351...24,747,383
Ensembl chr26:24,664,998...24,746,225 		JBrowse link
G MKI67 marker of proliferation Ki-67 ameliorates ISO human cells in mouse model RGD PMID:34974791 RGD:153344629 NCBI chr 9:120,697,183...120,727,039
Ensembl chr 9:120,698,834...120,726,866 		JBrowse link
G MLH1 mutL homolog 1 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:11726306 PMID:12919137 PMID:15849733 PMID:17895478 PMID:18931482 More... NCBI chr15:2,364,537...2,418,379
Ensembl chr15:2,364,738...2,418,393 		JBrowse link
G MLH3 mutL homolog 3 sexual_dimorphism
susceptibility 		ISO DNA:SNP:3'utr: (rs108621)
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		RGD
ClinVar
OMIM		 PMID:25741868 PMID:28492532 PMID:29516665 PMID:31745173 RGD:153344543 NCBI chr24:52,231,468...52,266,179 JBrowse link
G MMP2 matrix metallopeptidase 2 ISO human cells in mouse model RGD PMID:30789971 RGD:151893289 NCBI chr 5:41,264,382...41,291,657
Ensembl chr 5:41,264,354...41,291,004 		JBrowse link
G MMP9 matrix metallopeptidase 9 treatment ISO mRNA:increased expresion:colorectum (human)
human cells in mouse model 		RGD PMID:21839130 PMID:32682784 RGD:152985531 RGD:153297782 NCBI chr 2:17,867,267...17,874,757
Ensembl chr 2:17,867,177...17,874,712 		JBrowse link
G MNS1 meiosis specific nuclear structural 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:27,026,932...27,060,044
Ensembl chr26:27,027,827...27,059,863 		JBrowse link
G MORF4L1 mortality factor 4 like 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:4,500,848...4,520,830 JBrowse link
G MPI mannose phosphate isomerase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,574,135...8,582,575
Ensembl chr26:8,573,219...8,582,515 		JBrowse link
G MRPL46 mitochondrial ribosomal protein L46 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:7,025,380...7,033,219
Ensembl chr29:7,025,442...7,033,219 		JBrowse link
G MRPS11 mitochondrial ribosomal protein S11 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:7,033,403...7,043,994
Ensembl chr29:7,033,378...7,047,044 		JBrowse link
G MSH2 mutS homolog 2 ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		ClinVar PMID:1710317 PMID:8700523 PMID:9259192 PMID:9774676 PMID:11208710 More... NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819 		JBrowse link
G MSH6 mutS homolog 6 ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		ClinVar PMID:10537275 PMID:10612827 PMID:11470537 PMID:11900875 PMID:14520694 More... NCBI chr14:59,375,602...59,400,252
Ensembl chr14:59,375,691...59,400,174 		JBrowse link
G MTFMT mitochondrial methionyl-tRNA formyltransferase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,556,747...18,583,528
Ensembl chr26:18,556,791...18,583,446 		JBrowse link
G MTMR10 myotubularin related protein 10 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:22561515 PMID:25992589 PMID:26493165 PMID:28492532 NCBI chr26:51,670,086...51,723,401
Ensembl chr26:51,670,132...51,724,226 		JBrowse link
G MUTYH mutY DNA glycosylase ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer 		ClinVar PMID:2914711 PMID:11818965 PMID:12393807 PMID:12606733 PMID:12917422 More... NCBI chr20:87,449,480...87,462,329
Ensembl chr20:87,448,986...87,462,265 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor ameliorates
disease_progression
severity 		ISO mRNA:decreased expression:colon (human)
DNA:SNP:promoter: (rs4988453) (human)
protein:increased expression:colonic mucosa (human) 		RGD PMID:20145615 PMID:24154872 PMID:24887488 PMID:30221070 RGD:150519917 RGD:150520171 RGD:150524331 RGD:150524336 NCBI chr15:1,276,804...1,281,811
Ensembl chr15:1,276,798...1,281,166 		JBrowse link
G MYEF2 myelin expression factor 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:35,107,127...35,145,344
Ensembl chr26:35,107,227...35,142,543 		JBrowse link
G MYO1B myosin IB ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr10:76,773,372...76,951,006
Ensembl chr10:76,773,042...76,951,235 		JBrowse link
G MYO1E myosin IE ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:24,138,462...24,378,602
Ensembl chr26:24,138,829...24,379,143 		JBrowse link
G MYO5A myosin VA ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:30,865,947...31,085,184 JBrowse link
G MYO5C myosin VC ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:31,095,461...31,196,514
Ensembl chr26:31,107,036...31,196,049 		JBrowse link
G MYO9A myosin IXA ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:11,339,033...11,640,982
Ensembl chr26:11,339,246...11,639,956 		JBrowse link
G MYZAP myocardial zonula adherens protein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:25,822,286...25,916,191
Ensembl chr26:25,821,849...25,916,205 		JBrowse link
G NDC80 NDC80 kinetochore complex component ISO mRNA:increased expression:colorectum RGD PMID:19878654 RGD:28867241 NCBI chr18:61,835,027...61,882,660
Ensembl chr18:61,835,064...61,881,627 		JBrowse link
G NDUFAF1 NADH:ubiquinone oxidoreductase complex assembly factor 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:41,598,979...41,620,883
Ensembl chr26:41,598,977...41,622,438 		JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:27,487,652...27,655,742
Ensembl chr26:27,487,796...27,655,992 		JBrowse link
G NEIL1 nei like DNA glycosylase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,074,706...8,082,437
Ensembl chr26:8,074,310...8,082,123 		JBrowse link
G NEO1 neogenin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:10,173,707...10,427,732
Ensembl chr26:10,176,215...10,427,675 		JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor ISO DNA:loss of heterozygosity RGD PMID:24323642 RGD:150530506 NCBI chr19:12,474,479...12,572,144
Ensembl chr19:12,474,468...12,572,250 		JBrowse link
G NFE2L2 NFE2 like bZIP transcription factor 2 treatment ISO ClinVar Annotator: match by term: Colorectal cancer RGD
ClinVar		 PMID:22859375 PMID:29018201 RGD:10412740 NCBI chr10:62,789,647...62,825,651
Ensembl chr10:62,790,124...62,825,339 		JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 ISO associated with Experimental Colitis RGD PMID:25727407 RGD:40902978 NCBI chr 7:50,589,494...50,711,472
Ensembl chr 7:50,589,856...50,711,498 		JBrowse link
G NGRN neugrin, neurite outgrowth associated ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:8,809,776...8,816,862
Ensembl chr29:8,809,912...8,816,441 		JBrowse link
G NMB neuromedin B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:3,703,390...3,706,463 JBrowse link
G NOC4L nucleolar complex associated 4 homolog ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr11:127,525,569...127,531,834
Ensembl chr11:127,525,579...127,532,804 		JBrowse link
G NOP10 NOP10 ribonucleoprotein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:48,563,535...48,566,409
Ensembl chr26:48,563,517...48,566,745 		JBrowse link
G NOX5 NADPH oxidase 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:14,400,946...14,444,599
Ensembl chr26:14,401,374...14,443,890 		JBrowse link
G NPTN neuroplastin ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:9,852,592...9,924,952
Ensembl chr26:9,852,658...9,926,109 		JBrowse link
G NR2E3 nuclear receptor subfamily 2 group E member 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:11,648,675...11,655,408
Ensembl chr26:11,648,758...11,654,850 		JBrowse link
G NRAS NRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Malignant Colorectal Neoplasm OMIM
ClinVar		 PMID:17671181 PMID:22220252 PMID:23325582 PMID:23708912 PMID:24806883 More... NCBI chr20:18,953,273...18,966,002
Ensembl chr20:18,953,883...18,961,931 		JBrowse link
G NRG4 neuregulin 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:7,232,141...7,355,637
Ensembl chr26:7,276,818...7,347,514 		JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 disease_progression ISO ClinVar Annotator: match by term: Familial colorectal cancer RGD
ClinVar		 PMID:28492532 PMID:33593392 RGD:150520009 NCBI chr29:6,441,824...6,831,029
Ensembl chr29:6,447,256...6,830,526 		JBrowse link
G NUF2 NUF2 component of NDC80 kinetochore complex disease_progression ISO mRNA:increased expression:colorectum RGD PMID:19878654 PMID:24247253 RGD:28867241 RGD:28867244 NCBI chr25:65,462,608...65,493,242
Ensembl chr25:65,462,603...65,493,246 		JBrowse link
G NUSAP1 nucleolar and spindle associated protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:41,624,507...41,667,568
Ensembl chr26:41,624,894...41,667,548 		JBrowse link
G NUTM1 NUT midline carcinoma family member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:48,547,889...48,560,897
Ensembl chr26:48,548,133...48,560,731 		JBrowse link
G OAZ2 ornithine decarboxylase antizyme 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,881,776...18,897,043
Ensembl chr26:18,881,831...18,895,915 		JBrowse link
G OIP5 Opa interacting protein 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:41,667,929...41,682,056 JBrowse link
G ONECUT1 one cut homeobox 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:30,609,392...30,645,996 JBrowse link
G OSBP oxysterol binding protein ISO RGD PMID:21999571 RGD:41404653 NCBI chr 1:14,009,735...14,053,232
Ensembl chr 1:14,010,020...14,051,605 		JBrowse link
G OTUD7A OTU deubiquitinase 7A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:22561515 PMID:25992589 PMID:26493165 PMID:28492532 NCBI chr26:50,842,957...51,213,515 JBrowse link
G P2RX2 purinergic receptor P2X 2 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr11:127,961,004...127,964,529
Ensembl chr11:127,961,079...127,964,113 		JBrowse link
G PAK6 p21 (RAC1) activated kinase 6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,737,848...42,798,960
Ensembl chr26:42,737,613...42,750,248 		JBrowse link
G PALB2 partner and localizer of BRCA2 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar PMID:17200668 PMID:17200671 PMID:17200672 PMID:17420451 PMID:19264984 More... NCBI chr 5:21,322,952...21,358,363
Ensembl chr 5:21,322,975...21,358,198 		JBrowse link
G PAQR5 progestin and adipoQ receptor family member 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:14,052,236...14,149,964
Ensembl chr26:14,049,194...14,106,746 		JBrowse link
G PARP16 poly(ADP-ribose) polymerase family member 16 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,292,118...18,323,760
Ensembl chr26:18,292,186...18,333,951 		JBrowse link
G PARP6 poly(ADP-ribose) polymerase family member 6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:11,182,436...11,214,490
Ensembl chr26:11,182,424...11,214,728 		JBrowse link
G PATL2 PAT1 homolog 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:38,372,296...38,384,649
Ensembl chr26:38,374,512...38,384,424 		JBrowse link
G PBRM1 polybromo 1 severity ISO RGD PMID:28940253 RGD:150340627 NCBI chr22:13,914,023...14,059,221
Ensembl chr22:13,913,285...14,055,254 		JBrowse link
G PCLAF PCNA clamp associated factor ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:19,140,901...19,155,488
Ensembl chr26:19,140,843...19,155,730 		JBrowse link
G PDCD7 programmed cell death 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,457,101...18,470,020
Ensembl chr26:18,457,166...18,469,525 		JBrowse link
G PDE8A phosphodiesterase 8A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:3,214,183...3,367,051
Ensembl chr29:3,213,165...3,367,571 		JBrowse link
G PDGFRL platelet derived growth factor receptor like ISO OMIM NCBI chr 8:15,671,827...15,739,396
Ensembl chr 8:15,671,425...15,738,199 		JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,273,982...39,300,170
Ensembl chr26:39,272,997...39,349,966 		JBrowse link
G PEAK1 pseudopodium enriched atypical kinase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:5,891,804...6,187,854
Ensembl chr26:6,125,081...6,184,726 		JBrowse link
G PELI1 pellino E3 ubiquitin protein ligase 1 susceptibility ISO DNA:SNP:exon: (rs329497) (human) RGD PMID:33470690 RGD:152995405 NCBI chr14:42,864,857...42,930,315
Ensembl chr14:42,864,897...42,930,394 		JBrowse link
G PEX11A peroxisomal biogenesis factor 11 alpha ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:8,220,082...8,229,448
Ensembl chr29:8,221,920...8,229,243 		JBrowse link
G PGBD4 piggyBac transposable element derived 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:48,802,210...48,804,513
Ensembl chr26:48,802,223...48,803,980 		JBrowse link
G PHGR1 proline, histidine and glycine rich 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,658,800...42,665,183 JBrowse link
G PHOX2B paired like homeobox 2B ISO DNA:hypermethylation: : (human) RGD PMID:22552777 RGD:152025258 NCBI chr27:8,602,764...8,608,052
Ensembl chr27:8,603,484...8,606,299 		JBrowse link
G PIAS1 protein inhibitor of activated STAT 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:15,294,296...15,432,731
Ensembl chr26:15,297,934...15,432,659 		JBrowse link
G PIERCE2 piercer of microtubule wall 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:28,023,735...28,029,095
Ensembl chr26:28,023,603...28,028,929 		JBrowse link
G PIF1 PIF1 5'-to-3' DNA helicase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,755,276...18,765,396
Ensembl chr26:18,756,622...18,765,395 		JBrowse link
G PIGB phosphatidylinositol glycan anchor biosynthesis class B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:28,076,605...28,113,859
Ensembl chr26:28,076,819...28,113,784 		JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		OMIM
ClinVar		 PMID:15016963 PMID:15254419 PMID:15520168 PMID:15647370 PMID:15805248 More... NCBI chr15:10,218,034...10,304,874
Ensembl chr15:10,218,805...10,294,316 		JBrowse link
G PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta ameliorates ISO human cells in mouse model RGD PMID:30789971 RGD:151893289 NCBI chr15:51,705,585...51,885,848
Ensembl chr15:51,775,733...51,889,238 		JBrowse link
G PIK3CD phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta ISO DNA:hypermethylation RGD PMID:25366420 RGD:13432038 NCBI chr20:122,040,131...122,111,397
Ensembl chr20:122,041,963...122,078,504 		JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar PMID:22351933 PMID:25133428 PMID:25741868 PMID:28492532 NCBI chr 4:64,321,296...64,406,188
Ensembl chr 4:64,321,078...64,406,519 		JBrowse link
G PKM pyruvate kinase M1/2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:11,224,332...11,255,538 JBrowse link
G PLA2G2A phospholipase A2 group IIA susceptibility ISO ClinVar Annotator: match by term: PLA2G2A-related condition OMIM
ClinVar		 PMID:25741868 PMID:28492532 NCBI chr20:112,564,414...112,569,735
Ensembl chr20:112,565,165...112,569,786 		JBrowse link
G PLA2G4B phospholipase A2 group IVB ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:41,137,643...41,147,384 JBrowse link
G PLA2G4D phospholipase A2 group IVD ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:40,895,718...40,923,092
Ensembl chr26:40,897,660...40,922,031 		JBrowse link
G PLA2G4E phospholipase A2 group IVE ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:40,938,730...41,001,787
Ensembl chr26:40,939,712...41,001,217 		JBrowse link
G PLA2G4F phospholipase A2 group IVF ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:40,835,777...40,852,021
Ensembl chr26:40,836,266...40,852,054 		JBrowse link
G PLCB2 phospholipase C beta 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,706,462...42,727,516
Ensembl chr26:42,707,625...42,727,145 		JBrowse link
G PLCG1 phospholipase C gamma 1 ISO protein:increased expression:colorectum (human) RGD PMID:8275435 RGD:151356938 NCBI chr 2:22,599,547...22,638,394 JBrowse link
G PLEKHO2 pleckstrin homology domain containing O2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,711,745...18,737,769
Ensembl chr26:18,711,757...18,737,736 		JBrowse link
G PLIN1 perilipin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:8,204,071...8,219,974
Ensembl chr29:8,202,035...8,215,921 		JBrowse link
G PML PML nuclear body scaffold ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:9,441,998...9,494,949
Ensembl chr26:9,451,112...9,494,931 		JBrowse link
G PMS1 PMS1 homolog 1, mismatch repair system component ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr10:75,305,129...75,392,193
Ensembl chr10:75,311,887...75,392,590 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit exacerbates
sexual_dimorphism
severity
disease_progression
onset 		ISO DNA:mutations:multiple (human)
DNA:missense mutation:CDS:p.L424V (human)
DNA:missense mutation:CDS:multiple (human)
DNA:missense mutation:CDS, exon 9:p.P286R (human)
protein:decreased expression:colorectum (human)
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 3 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer with chromosomal instability, somatic | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: DLC1-related condition | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: DLC1-related condition | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: GALNT12-related condition | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm | ClinVar Annotator: match by term: PTPRJ-related condition 		RGD
ClinVar
OMIM		 PMID:3432686 PMID:9536098 PMID:12424237 PMID:14760276 PMID:15285897 More... RGD:151347638 RGD:151347640 RGD:151347642 RGD:151347643 RGD:151347652 RGD:151356953 NCBI chr11:127,966,879...128,030,442
Ensembl chr11:127,965,896...128,030,292 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:7,864,319...7,881,577
Ensembl chr29:7,863,277...7,882,068 		JBrowse link
G POLR2M RNA polymerase II subunit M ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:25,792,584...25,802,580
Ensembl chr26:25,791,219...25,802,383 		JBrowse link
G POT1 protection of telomeres 1 disease_progression ISO mRNA:increased expression:colorectum
DNA:SNP: :rs116895242 (human)
DNA:SNP: :rs2975843 (human) 		RGD PMID:25194444 PMID:27459707 PMID:32586834 RGD:151356940 RGD:151356943 RGD:151356949 NCBI chr21:93,572,139...93,688,374
Ensembl chr21:93,571,272...93,655,869 		JBrowse link
G PPCDC phosphopantothenoylcysteine decarboxylase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,406,288...8,450,378
Ensembl chr26:8,420,032...8,450,304 		JBrowse link
G PPIB peptidylprolyl isomerase B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:19,380,496...19,399,596 JBrowse link
G PPIP5K1 diphosphoinositol pentakisphosphate kinase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532
G PPP1R14D protein phosphatase 1 regulatory inhibitor subunit 14D ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,163,604...42,186,624
Ensembl chr26:42,164,577...42,185,523 		JBrowse link
G PRDM1 PR/SET domain 1 ISO mRNA:increased expression:colorectum: RGD PMID:32393998 RGD:150530478 NCBI chr13:67,695,436...67,719,487
Ensembl chr13:67,695,309...67,718,931 		JBrowse link
G PRDX2 peroxiredoxin 2 disease_progression ISO RGD PMID:23393224 RGD:153350137 NCBI chr 6:11,484,452...11,489,067
Ensembl chr 6:11,481,784...11,489,051 		JBrowse link
G PRTG protogenin ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:27,735,883...27,854,530 JBrowse link
G PSMA4 proteasome 20S subunit alpha 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:4,793,046...4,802,098
Ensembl chr26:4,793,307...4,801,886 		JBrowse link
G PSTPIP1 proline-serine-threonine phosphatase interacting protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:6,260,509...6,302,717
Ensembl chr26:6,260,349...6,302,673 		JBrowse link
G PTEN phosphatase and tensin homolog exacerbates ISO protein:increased expression:colorectum, cytoplasm (human) RGD PMID:27661110 RGD:127285614 NCBI chr 9:81,308,058...81,412,386
Ensembl chr 9:81,309,099...81,409,146 		JBrowse link
G PTPN12 protein tyrosine phosphatase non-receptor type 12 ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: PTPN12-related condition OMIM
ClinVar		 PMID:25741868 NCBI chr21:71,285,917...71,389,645
Ensembl chr21:71,285,736...71,389,926 		JBrowse link
G PTPN13 protein tyrosine phosphatase non-receptor type 13 susceptibility ISO DNA:missense mutations:cds:p.I1522M, p.Y2081D (human) RGD PMID:19672627 RGD:152176665 NCBI chr 7:34,974,028...35,200,214
Ensembl chr 7:34,974,082...35,200,293 		JBrowse link
G PTPN9 protein tyrosine phosphatase non-receptor type 9 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:7,852,220...7,959,671
Ensembl chr26:7,852,940...7,958,039 		JBrowse link
G PTPRJ protein tyrosine phosphatase receptor type J susceptibility ISO DNA:missense mutations:cds:p.R326Q, p.Q276P (human)
ClinVar Annotator: match by term: PTPRJ-related condition 		OMIM
RGD
ClinVar		 PMID:12089527 PMID:19672627 PMID:25741868 PMID:28492532 PMID:33116287 RGD:152176665 NCBI chr 1:17,137,896...17,328,836
Ensembl chr 1:17,135,907...17,328,590 		JBrowse link
G PTPRT protein tyrosine phosphatase receptor type T treatment ISO DNA:deletion: RGD PMID:30200630 RGD:150520195 NCBI chr 2:20,613,352...21,720,417 JBrowse link
G PUS1 pseudouridine synthase 1 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr11:127,307,955...127,327,596
Ensembl chr11:127,308,053...127,328,301 		JBrowse link
G PYGO1 pygopus family PHD finger 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:27,886,926...27,934,303
Ensembl chr26:27,888,233...27,927,171 		JBrowse link
G RAB11A RAB11A, member RAS oncogene family ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:17,682,629...17,702,325
Ensembl chr26:17,682,874...17,702,309 		JBrowse link
G RAB27A RAB27A, member RAS oncogene family ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:28,140,972...28,227,847
Ensembl chr26:28,197,464...28,227,963 		JBrowse link
G RAB8B RAB8B, member RAS oncogene family ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:20,275,555...20,354,298
Ensembl chr26:20,275,258...20,354,202 		JBrowse link
G RAC1 Rac family small GTPase 1 disease_progression
ameliorates 		ISO mRNA:alternative form
human cell line in a mouse model 		RGD PMID:17597401 PMID:24833563 PMID:29884911 RGD:13432050 RGD:13432052 RGD:152998911 NCBI chr28:15,583,609...15,610,753
Ensembl chr28:15,583,516...15,610,328 		JBrowse link
G RAD51 RAD51 recombinase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,281,085...42,319,394
Ensembl chr26:42,279,608...42,318,169 		JBrowse link
G RAD51D RAD51 paralog D ISO ClinVar Annotator: match by term: Malignant Colorectal Neoplasm ClinVar PMID:21822267 PMID:22986143 PMID:24130102 PMID:25445424 PMID:25741868 More... NCBI chr16:28,603,326...28,623,120
Ensembl chr16:28,604,500...28,622,845 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein onset
susceptibility 		ISO DNA:SNP,haplotypes:3'utr: (rs1051669) (human)
DNA:SNPs:3'utr: (rs7963551, rs11226) (human) 		RGD PMID:26735576 PMID:29245274 RGD:151361161 RGD:151361212 NCBI chr11:893,984...989,119
Ensembl chr11:895,292...927,430 		JBrowse link
G RAD54B RAD54 homolog B ISO OMIM NCBI chr 8:89,351,203...89,450,047
Ensembl chr 8:89,351,415...89,442,825 		JBrowse link
G RAMAC RNA guanine-7 methyltransferase activating subunit ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:2,652,843...2,667,718 JBrowse link
G RAMP2 receptor activity modifying protein 2 ISO mRNA:increased expression:colorectum (human) RGD PMID:21839130 RGD:152985531 NCBI chr16:63,526,915...63,529,697
Ensembl chr16:63,526,305...63,528,767 		JBrowse link
G RAMP3 receptor activity modifying protein 3 ISO mRNA:increased expression:colorectum (human) RGD PMID:21839130 RGD:152985531 NCBI chr21:13,494,981...13,521,141 JBrowse link
G RASGRF1 Ras protein specific guanine nucleotide releasing factor 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:4,298,091...4,431,606
Ensembl chr26:4,299,116...4,432,420 		JBrowse link
G RASGRP1 RAS guanyl releasing protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:44,405,007...44,483,291 JBrowse link
G RASL12 RAS like family 12 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,516,275...18,533,299
Ensembl chr26:18,518,001...18,535,726 		JBrowse link
G RBFOX1 RNA binding fox-1 homolog 1 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr 5:4,896,225...7,365,137 JBrowse link
G RBM10 RNA binding motif protein 10 onset ISO RGD PMID:33194656 RGD:151356979 NCBI chr  X:44,339,653...44,373,509
Ensembl chr  X:44,339,877...44,373,339 		JBrowse link
G RBPMS2 RNA binding protein, mRNA processing factor 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,810,371...18,847,642 JBrowse link
G RCN2 reticulocalbin 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:6,348,032...6,366,302
Ensembl chr26:6,347,539...6,366,122 		JBrowse link
G REC114 REC114 meiotic recombination protein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:9,924,765...10,041,255
Ensembl chr26:9,925,054...10,040,533 		JBrowse link
G REL REL proto-oncogene, NF-kB subunit susceptibility ISO associated with Experimental Colitis RGD PMID:25727407 RGD:40902978 NCBI chr14:46,068,212...46,097,226
Ensembl chr14:46,068,014...46,096,802 		JBrowse link
G RET ret proto-oncogene ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr 9:38,746,088...38,798,773
Ensembl chr 9:38,769,170...38,796,712 		JBrowse link
G RFX7 regulatory factor X7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:27,248,814...27,399,385 JBrowse link
G RHCG Rh family C glycoprotein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:8,015,391...8,040,811
Ensembl chr29:8,015,620...8,040,486 		JBrowse link
G RHOA ras homolog family member A ISO RGD PMID:17597401 RGD:13432052 NCBI chr22:10,757,381...10,809,257
Ensembl chr22:10,757,337...10,772,704 		JBrowse link
G RHOV ras homolog family member V ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,112,368...42,114,899
Ensembl chr26:42,112,953...42,114,039 		JBrowse link
G RICTOR RPTOR independent companion of MTOR complex 2 disease_progression ISO associated with Lymphatic Metastasis; protein:increased expression:colon (human) RGD PMID:27063170 RGD:152995519 NCBI chr 4:37,758,531...37,885,323
Ensembl chr 4:37,762,901...37,873,766 		JBrowse link
G RLBP1 retinaldehyde binding protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:7,756,742...7,769,061
Ensembl chr29:7,757,158...7,765,777 		JBrowse link
G RMDN3 regulator of microtubule dynamics 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,243,832...42,282,811
Ensembl chr26:42,256,613...42,278,771 		JBrowse link
G RMI1 RecQ mediated genome instability 1 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr12:94,792,202...94,816,112
Ensembl chr12:94,813,042...94,814,919 		JBrowse link
G RNF111 ring finger protein 111 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:24,416,946...24,528,989
Ensembl chr26:24,416,093...24,528,862 		JBrowse link
G RNF43 ring finger protein 43 ameliorates
exacerbates
onset
treatment 		ISO DNA:silent mutation, missense mutation:exon 3:p.R117R, p.R117H (rs2257205) (human)
DNA:mutations:multiple (human)
protein:decreased expression:colorectum (mouse)
mRNA, protein:decreased expression:colorectum (human)
DNA:mutations:multiple: (human)
associated with Neoplasm Metastasis;DNA:mutations:multiple (human) 		RGD PMID:22202234 PMID:22977472 PMID:23267878 PMID:25344691 PMID:27661107 More... RGD:151356979 RGD:151361145 RGD:151361209 RGD:151361218 RGD:151361223 RGD:151361224 RGD:151361228 RGD:151665113 RGD:151665114 RGD:151665115 RGD:151665116 NCBI chr16:34,981,126...35,046,478
Ensembl chr16:34,980,922...35,045,107 		JBrowse link
G RORA RAR related orphan receptor A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:22,263,889...23,002,224
Ensembl chr26:22,812,445...22,993,021 		JBrowse link
G RPAP1 RNA polymerase II associated protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:41,457,696...41,488,315
Ensembl chr26:41,457,725...41,488,314 		JBrowse link
G RPL4 ribosomal protein L4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:17,046,189...17,051,427 JBrowse link
G RPLP1 ribosomal protein lateral stalk subunit P1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:14,002,074...14,004,481
Ensembl chr26:14,002,075...14,004,474 		JBrowse link
G RPP25 ribonuclease P and MRP subunit p25 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,516,782...8,520,101
Ensembl chr26:8,517,948...8,518,547 		JBrowse link
G RPS17 ribosomal protein S17 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:3,109,426...3,113,538 JBrowse link
G RPS27L ribosomal protein S27 like ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:20,385,684...20,389,351 JBrowse link
G RPUSD2 RNA pseudouridine synthase domain containing 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,430,914...42,436,137
Ensembl chr26:42,429,263...42,436,090 		JBrowse link
G RSL24D1 ribosomal L24 domain containing 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:28,230,029...28,246,108
Ensembl chr26:28,230,168...28,245,761 		JBrowse link
G RTF1 RTF1 homolog, Paf1/RNA polymerase II complex component ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:41,523,610...41,589,014
Ensembl chr26:41,522,542...41,588,948 		JBrowse link
G RUNX2 RUNX family transcription factor 2 ISO RGD PMID:25925209 RGD:126779569 NCBI chr17:26,679,386...26,807,812
Ensembl chr17:26,683,175...26,807,319 		JBrowse link
G RUNX3 RUNX family transcription factor 3 ISO RGD PMID:25925209 RGD:126779569 NCBI chr20:107,769,244...107,802,154
Ensembl chr20:107,736,683...107,802,307 		JBrowse link
G SAXO2 stabilizer of axonemal microtubules 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:1,112,259...1,134,043 JBrowse link
G SCAMP2 secretory carrier membrane protein 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,592,240...8,627,897
Ensembl chr26:8,592,266...8,628,081 		JBrowse link
G SCAMP5 secretory carrier membrane protein 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,452,276...8,517,949 JBrowse link
G SCAPER S-phase cyclin A associated protein in the ER ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:6,400,083...6,934,573 JBrowse link
G SCG3 secretogranin III ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:31,655,789...31,693,585
Ensembl chr26:31,654,094...31,693,535 		JBrowse link
G SCG5 secretogranin V ISO ClinVar Annotator: match by term: Familial colorectal cancer
ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer 		ClinVar PMID:22561515 PMID:25992589 PMID:26493165 PMID:26947005 PMID:28492532 More... NCBI chr26:50,182,966...50,243,284
Ensembl chr26:50,189,473...50,243,282 		JBrowse link
G SEC11A SEC11 homolog A, signal peptidase complex subunit ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:3,645,234...3,690,510
Ensembl chr29:3,669,621...3,690,615 		JBrowse link
G SECISBP2L SECIS binding protein 2 like ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:34,205,361...34,303,783
Ensembl chr26:34,244,747...34,304,382 		JBrowse link
G SEMA4A semaphorin 4A ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar PMID:24265693 PMID:25637381 PMID:25741868 PMID:28492532 NCBI chr20:7,684,107...7,716,866
Ensembl chr20:7,683,994...7,708,741 		JBrowse link
G SEMA4B semaphorin 4B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:8,733,647...8,776,618
Ensembl chr29:8,749,015...8,775,621 		JBrowse link
G SEMA6D semaphorin 6D ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:35,511,593...36,095,816
Ensembl chr26:35,511,594...35,526,130 		JBrowse link
G SEMA7A semaphorin 7A (JohnMiltonHagen blood group) ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:9,039,774...9,063,700 JBrowse link
G SENP8 SUMO peptidase family member, NEDD8 specific ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:11,318,094...11,338,876
Ensembl chr26:11,318,800...11,319,438 		JBrowse link
G SEPTIN9 septin 9 ISO DNA:hypermethylation:urine: RGD PMID:33504902 RGD:153344542 NCBI chr16:44,211,692...44,424,242
Ensembl chr16:44,213,623...44,310,524 		JBrowse link
G SERF2 small EDRK-rich factor 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,250,718...39,252,786 JBrowse link
G SERINC4 serine incorporator 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,244,701...39,249,986
Ensembl chr26:39,244,783...39,249,776 		JBrowse link
G SERPINA1 serpin family A member 1 ISO protein:increased expression:serum RGD PMID:24886427 RGD:14695524 NCBI chr24:72,158,521...72,171,139
Ensembl chr24:72,156,784...72,163,500 		JBrowse link
G SERPINF1 serpin family F member 1 disease_progression ISO RGD PMID:23393224 RGD:153350137 NCBI chr16:1,408,453...1,424,197 JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase exacerbates ISO DNA:frameshift mutation:exon 3:c.4219delA (human)
mRNA:decreased expression:colon (human) 		RGD PMID:24925220 PMID:26069251 PMID:28825595 RGD:150429636 RGD:150429645 RGD:150429646 NCBI chr22:8,421,178...8,567,221
Ensembl chr22:8,420,960...8,567,201 		JBrowse link
G SGK2 serum/glucocorticoid regulated kinase 2 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr 2:20,217,768...20,245,675
Ensembl chr 2:20,218,420...20,246,186 		JBrowse link
G SH2B3 SH2B adaptor protein 3 susceptibility ISO DNA:missense mutation:CDS:p.W263R (rs3184504) (human) RGD PMID:26553438 RGD:11041896 NCBI chr11:106,657,601...106,703,940
Ensembl chr11:106,670,685...106,700,619 		JBrowse link
G SH2D7 SH2 domain containing 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:5,247,866...5,260,659
Ensembl chr26:5,249,265...5,260,145 		JBrowse link
G SH3GL3 SH3 domain containing GRB2 like 3, endophilin A3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:2,009,833...2,177,843
Ensembl chr29:2,009,776...2,177,747 		JBrowse link
G SHC4 SHC adaptor protein 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:34,319,831...34,467,072
Ensembl chr26:34,329,322...34,467,211 		JBrowse link
G SHF Src homology 2 domain containing F ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:38,005,743...38,036,378 JBrowse link
G SHH sonic hedgehog signaling molecule ISO RGD PMID:22901214 RGD:150520174 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395 		JBrowse link
G SIN3A SIN3 transcription regulator family member A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:7,971,208...8,060,888
Ensembl chr26:7,975,484...8,058,278 		JBrowse link
G SKIC8 SKI8 subunit of superkiller complex ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:5,037,386...5,062,578
Ensembl chr26:5,037,443...5,053,707 		JBrowse link
G SKOR1 SKI family transcriptional corepressor 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:15,667,477...15,679,809
Ensembl chr26:15,667,479...15,676,427 		JBrowse link
G SLC12A1 solute carrier family 12 member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:34,974,947...35,077,241
Ensembl chr26:34,976,126...35,075,186 		JBrowse link
G SLC12A6 solute carrier family 12 member 6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:48,570,399...48,673,935
Ensembl chr26:48,589,770...48,674,486 		JBrowse link
G SLC24A1 solute carrier family 24 member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:17,924,872...17,969,413
Ensembl chr26:17,923,872...17,956,668 		JBrowse link
G SLC24A5 solute carrier family 24 member 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:35,143,004...35,164,134
Ensembl chr26:35,143,097...35,163,718 		JBrowse link
G SLC27A2 solute carrier family 27 member 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:33,080,844...33,134,467
Ensembl chr26:33,083,317...33,134,433 		JBrowse link
G SLC28A1 solute carrier family 28 member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:3,387,226...3,469,461
Ensembl chr29:3,403,685...3,468,626 		JBrowse link
G SLC28A2 solute carrier family 28 member 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:37,927,200...37,956,729 JBrowse link
G SLC30A4 solute carrier family 30 member 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:37,692,164...37,732,102
Ensembl chr26:37,692,219...37,731,292 		JBrowse link
G SLC51B SLC51 subunit beta ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,533,254...18,541,881
Ensembl chr26:18,529,642...18,536,877 		JBrowse link
G SLC7A5 solute carrier family 7 member 5 severity ISO RGD PMID:29344181 RGD:151361284 NCBI chr 5:73,229,953...73,269,801
Ensembl chr 5:73,229,951...73,269,754 		JBrowse link
G SLC9A9 solute carrier family 9 member A9 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr15:46,781,220...47,362,031
Ensembl chr15:46,781,271...47,360,525 		JBrowse link
G SLCO1B3 solute carrier organic anion transporter family member 1B3 disease_progression ISO protein:increased expression:colorectum (human) RGD PMID:21677819 RGD:152995437 NCBI chr11:20,637,429...20,760,577
Ensembl chr11:20,648,582...20,761,161 		JBrowse link
G SLTM SAFB like transcription modulator ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:24,583,671...24,639,455
Ensembl chr26:24,583,699...24,642,460 		JBrowse link
G SMAD3 SMAD family member 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:16,319,959...16,446,472
Ensembl chr26:16,320,933...16,446,527 		JBrowse link
G SMAD4 SMAD family member 4 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar PMID:28492532 NCBI chr18:29,894,157...29,951,445
Ensembl chr18:29,897,621...29,934,478 		JBrowse link
G SMAD6 SMAD family member 6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:16,760,117...16,841,286
Ensembl chr26:16,759,260...16,840,240 		JBrowse link
G SMAD7 SMAD family member 7 susceptibility ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 3 | ClinVar Annotator: match by term: SMAD7-related condition OMIM
ClinVar		 PMID:17934461 PMID:18372901 PMID:18372905 PMID:25741868 PMID:28492532 NCBI chr18:31,993,543...32,024,088
Ensembl chr18:31,993,681...32,024,850 		JBrowse link
G SMARCC1 SWI/SNF related BAF chromatin remodeling complex subunit C1 ISO RNA:increased expression:colorectum (human) RGD PMID:32606978 RGD:151347862 NCBI chr22:8,987,936...9,167,689
Ensembl chr22:8,987,012...9,134,946 		JBrowse link
G SMC2 structural maintenance of chromosomes 2 exacerbates ISO mRNA:decreased expression:colorectum (human) RGD PMID:31357676 RGD:151356956 NCBI chr12:35,377,381...35,423,218
Ensembl chr12:35,374,947...35,423,364 		JBrowse link
G SMO smoothened, frizzled class receptor ISO RGD PMID:22901214 RGD:150520174 NCBI chr21:97,788,955...97,814,549
Ensembl chr21:97,788,624...97,814,709 		JBrowse link
G SNAI1 snail family transcriptional repressor 1 treatment ISO Human cells in mouse model RGD PMID:32682784 RGD:153297782 NCBI chr 2:13,988,059...13,993,780
Ensembl chr 2:13,988,024...13,993,746 		JBrowse link
G SNAP23 synaptosome associated protein 23 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:40,443,478...40,485,211
Ensembl chr26:40,442,615...40,482,346 		JBrowse link
G SNAPC5 small nuclear RNA activating complex polypeptide 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:17,052,898...17,056,839
Ensembl chr26:17,052,976...17,056,245 		JBrowse link
G SNUPN snurportin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:7,806,698...7,835,477 JBrowse link
G SNX1 sorting nexin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:19,400,298...19,446,668
Ensembl chr26:19,406,517...19,446,700 		JBrowse link
G SNX22 sorting nexin 22 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:19,383,558...19,386,664
Ensembl chr26:19,383,812...19,386,568 		JBrowse link
G SNX33 sorting nexin 33 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:7,776,989...7,787,873
Ensembl chr26:7,778,390...7,786,591 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 disease_progression ISO RGD PMID:27133036 RGD:150573688 NCBI chr 5:10,731,866...10,733,745
Ensembl chr 5:10,732,350...10,732,991 		JBrowse link
G SORD sorbitol dehydrogenase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:38,129,236...38,173,867
Ensembl chr26:38,126,911...38,155,381 		JBrowse link
G SOX9 SRY-box transcription factor 9 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr16:49,519,749...49,523,967
Ensembl chr16:49,518,185...49,523,898 		JBrowse link
G SPESP1 sperm equatorial segment protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:14,522,649...14,539,159
Ensembl chr26:14,522,648...14,539,190 		JBrowse link
G SPG11 SPG11 vesicle trafficking associated, spatacsin ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:38,386,000...38,482,236 JBrowse link
G SPG21 SPG21 abhydrolase domain containing, maspardin ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,596,106...18,624,287
Ensembl chr26:18,596,204...18,624,534 		JBrowse link
G SPINT1 serine peptidase inhibitor, Kunitz type 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,136,749...42,150,125
Ensembl chr26:42,134,536...42,150,118 		JBrowse link
G SPOP speckle type BTB/POZ protein exacerbates ISO mRNA:decreased expression:colorectum (human)
protein:decreased expression:colorectum (human)
DNA:hypermethylation:promoter (human) 		RGD PMID:26022775 PMID:28032859 PMID:30171794 RGD:11056110 RGD:153298921 RGD:153298926 NCBI chr16:69,990,554...70,073,241 JBrowse link
G SPPL2A signal peptide peptidase like 2A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:32,574,585...32,633,473
Ensembl chr26:32,574,612...32,634,034 		JBrowse link
G SPRED1 sprouty related EVH1 domain containing 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:44,623,212...44,724,651
Ensembl chr26:44,628,802...44,723,791 		JBrowse link
G SPTBN5 spectrin beta, non-erythrocytic 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:41,090,023...41,137,645
Ensembl chr26:41,091,478...41,135,932 		JBrowse link
G SQOR sulfide quinone oxidoreductase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:37,533,807...37,588,749
Ensembl chr26:37,533,749...37,567,124 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO OMIM NCBI chr 2:26,344,480...26,367,448
Ensembl chr 2:26,343,450...26,367,776 		JBrowse link
G SRP14 signal recognition particle 14 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,962,495...42,965,645
Ensembl chr26:42,962,525...42,965,352 		JBrowse link
G STARD5 StAR related lipid transfer domain containing 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:2,067,420...2,079,132
Ensembl chr26:2,067,456...2,077,949 		JBrowse link
G STARD9 StAR related lipid transfer domain containing 9 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:40,251,337...40,402,700
Ensembl chr26:40,250,832...40,324,816 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 ISO OMIM:114500 | OMIM:608812 | OMIM:611469 | OMIM:612229 | OMIM:612230 | OMIM:612231 | OMIM:612232 | OMIM:612589 | OMIM:612590 | OMIM:612591 | OMIM:612592 | OMIM:615083 MouseDO NCBI chr16:63,877,884...63,957,894
Ensembl chr16:63,922,862...63,957,984 		JBrowse link
G STIM1 stromal interaction molecule 1 disease_progression
susceptibility 		ISO mRNA,protein:increased expression:colorectum (human)
DNA:SNPs:intron, 3'utr: (rs3794050,rs7934581,rs3750996) (human) 		RGD PMID:25381814 PMID:25531324 PMID:33470690 RGD:152995364 RGD:152995402 RGD:152995405 NCBI chr 1:62,651,472...62,865,992
Ensembl chr 1:62,651,290...62,865,986 		JBrowse link
G STK33 serine/threonine kinase 33 ISO RGD PMID:30760631 RGD:405096660 NCBI chr 1:56,220,091...56,416,460
Ensembl chr 1:56,327,551...56,410,393 		JBrowse link
G STOML1 stomatin like 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:9,494,993...9,506,520
Ensembl chr26:9,497,339...9,508,548 		JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:9,275,317...9,311,302
Ensembl chr26:9,278,303...9,311,475 		JBrowse link
G TBC1D21 TBC1 domain family member 21 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:9,599,042...9,616,305
Ensembl chr26:9,599,157...9,613,986 		JBrowse link
G TBC1D2B TBC1 domain family member 2B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:5,276,348...5,358,247
Ensembl chr26:5,276,533...5,360,373 		JBrowse link
G TBX3 T-box transcription factor 3 disease_progression ISO mRNA,protein:increased expression:colorectum (human) RGD PMID:25628943 RGD:151361126 NCBI chr11:109,952,100...109,966,328
Ensembl chr11:109,952,054...109,965,065 		JBrowse link
G TCERG1 transcription elongation regulator 1 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr23:49,026,214...49,089,996
Ensembl chr23:49,026,250...49,090,063 		JBrowse link
G TCF12 transcription factor 12 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:26,219,881...26,585,452
Ensembl chr26:26,218,496...26,583,684 		JBrowse link
G TCF3 transcription factor 3 disease_progression ISO DNA:SNP:3' utr:rs1052918 (human)
DNA, mRNA:hypomethylation, increased expression 		RGD PMID:19828471 PMID:23940558 PMID:24454819 PMID:25375219 RGD:13432058 RGD:13432061 RGD:13432062 RGD:13432063 NCBI chr 6:1,393,147...1,440,515
Ensembl chr 6:1,393,107...1,440,479 		JBrowse link
G TCF7L2 transcription factor 7 like 2 ISO DNA:mutations:multiple (human) RGD PMID:25617745 RGD:13450926 NCBI chr 9:105,828,834...106,047,810 JBrowse link
G TERB2 telomere repeat binding bouquet formation protein 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:38,226,041...38,247,500
Ensembl chr26:38,226,687...38,247,076 		JBrowse link
G TES testin LIM domain protein exacerbates
severity 		ISO RGD PMID:27323777 RGD:597621674 NCBI chr21:84,913,067...84,963,290
Ensembl chr21:84,913,093...84,963,303 		JBrowse link
G TET2 tet methylcytosine dioxygenase 2 ISO mRNA:decreased expression:colon (human)
mRNA:increased expression: Blood, peripheral blood mononuclear cells (human)
associated with Neoplasm Metastasis; mRNA:decreased expression:colorectum (human)
mRNA, protein:increased expression:colorectum, CD4 positive T cells (human) 		RGD PMID:26816554 PMID:29875879 PMID:30013992 PMID:30713804 RGD:150429613 RGD:150429655 RGD:150429665 RGD:150429690 NCBI chr 7:53,193,824...53,326,813
Ensembl chr 7:53,193,941...53,326,942 		JBrowse link
G TEX9 testis expressed 9 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:27,059,890...27,245,658
Ensembl chr26:27,057,196...27,137,971 		JBrowse link
G TGFB1 transforming growth factor beta 1 disease_progression ISO protein:decreased expression:plasma RGD PMID:12778073 PMID:15057430 RGD:13432086 RGD:13432088 NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365 		JBrowse link
G TGFB2 transforming growth factor beta 2 disease_progression
treatment 		ISO RGD PMID:15057430 PMID:19661324 RGD:13432081 RGD:13432086 NCBI chr25:11,163,651...11,259,868
Ensembl chr25:11,163,100...11,258,470 		JBrowse link
G TGFB3 transforming growth factor beta 3 treatment ISO RGD PMID:12778073 RGD:13432088 NCBI chr24:53,203,593...53,227,483
Ensembl chr24:53,203,301...53,227,325 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 ISO sporadic colorectal cancer;DNA:deletion:exon: (rs11466445) (human) RGD PMID:24880985 RGD:155630638 NCBI chr12:40,272,507...40,321,740
Ensembl chr12:40,276,916...40,297,372 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:9590282 PMID:10362519 PMID:15235604 PMID:16283890 PMID:17344846 More... NCBI chr15:75,112,903...75,200,263
Ensembl chr15:75,112,561...75,197,711 		JBrowse link
G TGM5 transglutaminase 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,727,129...39,761,648
Ensembl chr26:39,734,288...39,761,441 		JBrowse link
G TGM7 transglutaminase 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,701,467...39,717,143
Ensembl chr26:39,701,479...39,716,964 		JBrowse link
G THAP10 THAP domain containing 10 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:12,568,451...12,578,691
Ensembl chr26:12,567,865...12,579,870 		JBrowse link
G THBS1 thrombospondin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:43,410,693...43,427,816
Ensembl chr26:43,410,580...43,427,812 		JBrowse link
G THSD4 thrombospondin type 1 domain containing 4 ISO ClinVar Annotator: match by term: DLC1-related condition ClinVar PMID:28492532 NCBI chr26:11,677,332...12,207,092
Ensembl chr26:11,683,231...11,912,098 		JBrowse link
G TICRR TOPBP1 interacting checkpoint and replication regulator ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:8,117,198...8,171,956 JBrowse link
G TIPIN TIMELESS interacting protein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:17,194,859...17,214,671
Ensembl chr26:17,198,734...17,214,810 		JBrowse link
G TLE3 TLE family member 3, transcriptional corepressor ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:13,355,915...13,406,446
Ensembl chr26:13,357,058...13,406,641 		JBrowse link
G TLN2 talin 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:20,688,048...21,140,585
Ensembl chr26:20,691,779...20,940,450 		JBrowse link
G TLNRD1 talin rod domain containing 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:2,388,914...2,391,944
Ensembl chr26:2,389,553...2,390,641 		JBrowse link
G TLR2 toll like receptor 2 susceptibility ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm OMIM
ClinVar		 PMID:25741868 PMID:28492532 NCBI chr 7:100,239,533...100,565,955
Ensembl chr 7:100,258,441...100,260,795 		JBrowse link
G TM6SF1 transmembrane 6 superfamily member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:2,508,945...2,538,820
Ensembl chr29:2,506,017...2,538,932 		JBrowse link
G TMCO5A transmembrane and coiled-coil domains 5A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:45,001,265...45,040,160
Ensembl chr26:45,023,323...45,038,035 		JBrowse link
G TMED3 transmembrane p24 trafficking protein 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:4,069,389...4,080,104
Ensembl chr26:4,069,150...4,080,083 		JBrowse link
G TMEM202 transmembrane protein 202 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:11,054,782...11,082,138
Ensembl chr26:11,054,924...11,064,686 		JBrowse link
G TMEM266 transmembrane protein 266 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:7,085,367...7,232,012
Ensembl chr26:7,086,016...7,154,647 		JBrowse link
G TMEM62 transmembrane protein 62 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,808,067...39,851,865
Ensembl chr26:39,807,923...39,851,611 		JBrowse link
G TMEM87A transmembrane protein 87A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:40,722,283...40,785,001
Ensembl chr26:40,722,464...40,785,863 		JBrowse link
G TMOD2 tropomodulin 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:31,560,112...31,624,967
Ensembl chr26:31,568,024...31,624,905 		JBrowse link
G TNFAIP3 TNF alpha induced protein 3 severity ISO DNA:SNP:3'utr: (rs6920220) (human) RGD PMID:22843550 RGD:151347611 NCBI chr13:35,537,103...35,553,396
Ensembl chr13:35,537,102...35,549,197 		JBrowse link
G TNFAIP8L3 TNF alpha induced protein 8 like 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:32,275,720...32,313,586 JBrowse link
G TNFSF9 TNF superfamily member 9 ISO protein:decreased expression:colon, rectum, mucosa (human) RGD PMID:16596186 RGD:2317353 NCBI chr 6:6,131,157...6,136,345
Ensembl chr 6:6,131,571...6,135,463 		JBrowse link
G TNIK TRAF2 and NCK interacting kinase ameliorates
exacerbates 		ISO protein:increased expression:colorectum RGD PMID:26499327 PMID:27562646 RGD:11530847 RGD:151347682 NCBI chr15:18,011,137...18,403,676
Ensembl chr15:18,011,170...18,399,981 		JBrowse link
G TP53 tumor protein p53 treatment
no_association 		ISO DNA:missense mutation: :p.P72R (human)
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm 		RGD
ClinVar
OMIM		 PMID:1349175 PMID:1565143 PMID:1565144 PMID:1591732 PMID:1631137 More... RGD:14995449 RGD:14995500 NCBI chr16:7,047,686...7,065,567
Ensembl chr16:7,045,146...7,066,223 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,489,925...39,595,096
Ensembl chr26:39,508,600...39,594,927 		JBrowse link
G TP73 tumor protein p73 susceptibility
exacerbates 		ISO DNA:hypermethylation:promoter: (human)
DNA:deletion:intron:IVS1-489_-417del (human)
DNA:SNPs:exon 2:4G>A, 14C>T (rs2273953, rs1801173) (human)
DNA:SNP:intron:g.3636226T>C (rs747828) (human) 		RGD PMID:14732927 PMID:21672615 PMID:29945573 PMID:30420492 PMID:31090204 RGD:151347580 RGD:151347581 RGD:151347587 RGD:151347588 RGD:151347590 NCBI chr20:127,958,002...128,035,792
Ensembl chr20:127,958,809...128,013,691 		JBrowse link
G TPM1 tropomyosin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:20,458,287...20,487,387
Ensembl chr26:20,466,037...20,487,135 		JBrowse link
G TRIM69 tripartite motif containing 69 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:38,284,883...38,313,874
Ensembl chr26:38,284,940...38,299,867 		JBrowse link
G TRIP4 thyroid hormone receptor interactor 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:19,065,934...19,133,489
Ensembl chr26:19,065,887...19,133,448 		JBrowse link
G TRPM1 transient receptor potential cation channel subfamily M member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:22561515 PMID:25992589 PMID:26493165 PMID:28492532 NCBI chr26:51,560,992...51,660,857
Ensembl chr26:51,586,041...51,660,171 		JBrowse link
G TRPM7 transient receptor potential cation channel subfamily M member 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:32,644,637...32,772,753
Ensembl chr26:32,669,187...32,771,378 		JBrowse link
G TSPAN3 tetraspanin 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:6,225,502...6,250,738
Ensembl chr26:6,225,610...6,251,896 		JBrowse link
G TTBK2 tau tubulin kinase 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:40,048,802...40,228,083
Ensembl chr26:40,048,943...40,231,228 		JBrowse link
G TTR transthyretin ISO protein:decreased expression:blood serum (human) RGD PMID:21136704 RGD:151664608 NCBI chr18:49,124,302...49,131,495
Ensembl chr18:49,124,121...49,131,399 		JBrowse link
G TUBGCP4 tubulin gamma complex component 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,596,788...39,630,859
Ensembl chr26:39,593,342...39,630,536 		JBrowse link
G TXNIP thioredoxin interacting protein disease_progression ISO mRNA:decreased expression:stomach RGD PMID:12553030 RGD:1642760 NCBI chr20:12,756,145...12,759,853
Ensembl chr20:12,756,053...12,761,177 		JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:41,429,667...41,449,130
Ensembl chr26:41,429,556...41,449,175 		JBrowse link
G UACA uveal autoantigen with coiled-coil domains and ankyrin repeats ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:12,693,208...12,792,900
Ensembl chr26:12,749,774...12,795,279 		JBrowse link
G UBAP1L ubiquitin associated protein 1 like ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:18,476,917...18,494,769
Ensembl chr26:18,483,734...18,494,676 		JBrowse link
G UBE2Q2 ubiquitin conjugating enzyme E2 Q2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:7,390,115...7,448,304
Ensembl chr26:7,389,997...7,448,137 		JBrowse link
G UBL7 ubiquitin like 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:9,013,610...9,028,077 JBrowse link
G UBR1 ubiquitin protein ligase E3 component n-recognin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,851,630...40,026,817 JBrowse link
G ULK3 unc-51 like kinase 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:8,628,289...8,635,465
Ensembl chr26:8,628,454...8,636,092 		JBrowse link
G UNC13C unc-13 homolog C ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:28,806,358...29,457,039 JBrowse link
G USP3 ubiquitin specific peptidase 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:19,947,806...20,030,515
Ensembl chr26:19,948,453...19,992,638 		JBrowse link
G USP50 ubiquitin specific peptidase 50 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:32,785,817...32,830,148 JBrowse link
G USP8 ubiquitin specific peptidase 8 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:32,829,627...32,906,493
Ensembl chr26:32,829,523...32,866,073 		JBrowse link
G VEGFA vascular endothelial growth factor A ameliorates ISO human cells in mouse model
mRNA:increased expression:colorectum (human) 		RGD PMID:21839130 PMID:30789971 RGD:151893289 RGD:152985531 NCBI chr17:28,377,959...28,394,508 JBrowse link
G VPS13C vacuolar protein sorting 13 homolog C ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:21,463,393...21,647,944
Ensembl chr26:21,463,657...21,648,603 		JBrowse link
G VPS18 VPS18 core subunit of CORVET and HOPS complexes ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,091,348...42,100,264
Ensembl chr26:42,088,938...42,100,243 		JBrowse link
G VPS39 VPS39 subunit of HOPS complex ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:40,787,204...40,834,065
Ensembl chr26:40,801,245...40,834,113 		JBrowse link
G WDR72 WD repeat domain 72 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:29,670,775...29,909,838
Ensembl chr26:29,699,645...29,904,754 		JBrowse link
G WDR73 WD repeat domain 73 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:3,707,254...3,718,600
Ensembl chr29:3,707,299...3,719,614 		JBrowse link
G WDR76 WD repeat domain 76 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,178,407...39,222,005
Ensembl chr26:39,176,535...39,223,993 		JBrowse link
G WDR93 WD repeat domain 93 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:8,205,213...8,280,335
Ensembl chr29:8,239,038...8,280,431 		JBrowse link
G WHAMM WASP homolog associated with actin, golgi membranes and microtubules ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:2,819,140...2,843,292
Ensembl chr29:2,819,367...2,843,144 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 onset ISO RGD PMID:26013439 PMID:30175821 RGD:21081520 RGD:21081528 NCBI chr16:7,065,531...7,085,590
Ensembl chr16:7,066,333...7,085,625 		JBrowse link
G XIAP X-linked inhibitor of apoptosis ISO mRNA, protein:increased expression:colonic mucosa (human) RGD PMID:27827395 RGD:153344527
G XPO1 exportin 1 ameliorates ISO human cell line in a mouse model RGD PMID:26603256 PMID:33745946 RGD:151665795 RGD:151667439 NCBI chr14:45,428,279...45,487,965
Ensembl chr14:45,432,619...45,488,723 		JBrowse link
G XPO5 exportin 5 susceptibility ISO DNA:snp, haplotype:3' utr:c.*659A>C (rs11077) (human) RGD PMID:26147304 RGD:11041733 NCBI chr17:28,585,317...28,637,045
Ensembl chr17:28,585,536...28,635,519 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 susceptibility
treatment
disease_progression
severity 		ISO DNA:SNP:: p.R194W (human)
DNA:SNP:exon 6: C>T p.R194W (human)
DNA:SNP:exon 10: p.R399Q (human)
DNA:SNP:cds: p.R399Q (human)
DNA:SNP:3'utr: (rs1799782) (human)
DNA:SNP:exon 10: p.R399Q G>A (human)
DNA:missense mutation:exon 10: p.R399Q (human)
DNA:missense mutation:exon 10: p.R399Q (rs25487) (human)
DNA:missense mutation:cds: p.R399Q G>A (human)
DNA:missense mutation:cds: p.R399Q (human) 		RGD PMID:15800946 PMID:17009149 PMID:22524842 PMID:22549274 PMID:22580644 More... RGD:11353313 RGD:150530641 RGD:150537038 RGD:150537039 RGD:150539454 RGD:150540339 RGD:150540340 RGD:150573706 RGD:150573803 RGD:150573806 NCBI chr 6:37,062,149...37,095,138
Ensembl chr 6:37,060,439...37,095,094 		JBrowse link
G XRCC2 X-ray repair cross complementing 2 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar PMID:26467025 PMID:28492532 PMID:32235514 NCBI chr21:120,795,188...120,827,737
Ensembl chr21:120,795,212...120,827,706 		JBrowse link
G YAP1 Yes1 associated transcriptional regulator treatment ISO human cells in mouse model RGD PMID:32682784 RGD:153297782 NCBI chr 1:93,479,478...93,605,340
Ensembl chr 1:93,479,135...93,606,808 		JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein F1 ameliorates ISO human cells in mouse model RGD PMID:34974791 RGD:153344629 NCBI chr 2:985,373...1,010,533
Ensembl chr 2:985,425...1,012,091 		JBrowse link
G ZFAND6 zinc finger AN1-type containing 6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:3,274,721...3,356,873
Ensembl chr26:3,274,194...3,314,527 		JBrowse link
G ZFHX3 zinc finger homeobox 3 exacerbates ISO mRNA, protein:increased expression:colorectum (human) RGD PMID:27435776 RGD:151361165 NCBI chr 5:55,912,325...56,174,010
Ensembl chr 5:55,907,983...56,085,112 		JBrowse link
G ZFYVE19 zinc finger FYVE-type containing 19 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:42,186,708...42,194,750
Ensembl chr26:42,184,668...42,193,473 		JBrowse link
G ZNF106 zinc finger protein 106 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:40,486,801...40,567,811
Ensembl chr26:40,486,913...40,563,332 		JBrowse link
G ZNF280D zinc finger protein 280D ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:26,774,805...26,872,299
Ensembl chr26:26,775,328...26,872,532 		JBrowse link
G ZNF592 zinc finger protein 592 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:3,554,095...3,611,845
Ensembl chr29:3,553,618...3,611,834 		JBrowse link
G ZNF609 zinc finger protein 609 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:19,015,388...19,021,849 JBrowse link
G ZNF710 zinc finger protein 710 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:8,551,823...8,632,636
Ensembl chr29:8,617,280...8,634,031 		JBrowse link
G ZNF770 zinc finger protein 770 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:47,910,742...47,918,178 JBrowse link
G ZNF774 zinc finger protein 774 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:9,512,568...9,578,702 JBrowse link
G ZSCAN2 zinc finger and SCAN domain containing 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr29:3,746,183...3,770,586
Ensembl chr29:3,744,923...3,769,890 		JBrowse link
G ZSCAN29 zinc finger and SCAN domain containing 29 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:39,631,076...39,643,281
Ensembl chr26:39,630,611...39,643,756 		JBrowse link
G ZWILCH zwilch kinetochore protein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr26:17,000,373...17,045,980
Ensembl chr26:17,000,148...17,045,804 		JBrowse link
Colorectal Cancer 10 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNC3 potassium voltage-gated channel subfamily C member 3 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 10 ClinVar PMID:28492532 NCBI chr 6:43,374,151...43,391,418 JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor ameliorates ISO RGD PMID:33177648 RGD:150519912 NCBI chr15:1,276,804...1,281,811
Ensembl chr15:1,276,798...1,281,166 		JBrowse link
G MYH14 myosin heavy chain 14 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 10 ClinVar PMID:28492532 NCBI chr 6:43,270,363...43,372,927
Ensembl chr 6:43,275,715...43,372,190 		JBrowse link
G NR1H2 nuclear receptor subfamily 1 group H member 2 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 10 ClinVar PMID:28492532 NCBI chr 6:43,438,428...43,445,190
Ensembl chr 6:43,437,950...43,446,063 		JBrowse link
colorectal carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR2 actin related protein 2 severity ISO protein:increased expression:colonic mucosa (human) RGD PMID:14990971 RGD:11570560 NCBI chr14:41,740,432...41,780,045
Ensembl chr14:41,739,968...41,779,964 		JBrowse link
G ACTR3 actin related protein 3 severity ISO protein:increased expression:colonic mucosa (human) RGD PMID:14990971 RGD:11570560 NCBI chr10:16,296,350...16,369,561
Ensembl chr10:16,297,502...16,369,220 		JBrowse link
G AGER advanced glycosylation end-product specific receptor treatment ISO RGD PMID:22467055 RGD:7245559 NCBI chr17:39,847,343...39,851,288
Ensembl chr17:39,847,759...39,851,127 		JBrowse link
G AKAP12 A-kinase anchoring protein 12 treatment ISO RGD PMID:21918680 RGD:14348959 NCBI chr13:78,691,588...78,812,333
Ensembl chr13:78,691,816...78,812,834 		JBrowse link
G ANTXR1 ANTXR cell adhesion molecule 1 treatment ISO RGD PMID:19528090 RGD:9684940 NCBI chr14:37,849,911...38,116,339
Ensembl chr14:37,877,436...38,115,938 		JBrowse link
G ARID1A AT-rich interaction domain 1A onset ISO protein:decreased expression:colorectum (human) RGD PMID:24925223 RGD:126790632 NCBI chr20:105,981,549...106,066,093
Ensembl chr20:105,981,290...106,065,672 		JBrowse link
G AXIN2 axin 2 ISO ClinVar Annotator: match by term: Colorectal carcinoma ClinVar PMID:15042511 PMID:16199547 PMID:21416598 PMID:25741868 PMID:28492532 NCBI chr16:55,874,043...55,906,739
Ensembl chr16:55,874,072...55,907,281 		JBrowse link
G BIRC3 baculoviral IAP repeat containing 3 ameliorates ISO human cell line in a mouse model RGD PMID:30630498 RGD:152999008 NCBI chr 1:93,692,239...93,711,905 JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger ISO RGD PMID:14732230 RGD:1580058 NCBI chr 9:22,095,592...22,104,894 JBrowse link
G BRCA1 BRCA1 DNA repair associated ISO RGD PMID:11497291 RGD:126925969 NCBI chr16:63,162,827...63,243,928 JBrowse link
G BRCA2 BRCA2 DNA repair associated ISO RGD PMID:11497291 RGD:126925969 NCBI chr 3:11,070,086...11,155,257
Ensembl chr 3:11,071,682...11,155,213 		JBrowse link
G BRD7 bromodomain containing 7 severity ISO mRNA,protein:decreased expression:colon: RGD PMID:23215825 RGD:9586444 NCBI chr 5:36,114,951...36,168,786
Ensembl chr 5:36,112,289...36,168,728 		JBrowse link
G CA12 carbonic anhydrase 12 disease_progression ISO RGD PMID:27688658 RGD:155226860 NCBI chr26:20,162,706...20,221,680
Ensembl chr26:20,162,926...20,224,502 		JBrowse link
G CA2 carbonic anhydrase 2 disease_progression ISO RGD PMID:27688658 RGD:155226860 NCBI chr 8:80,830,963...80,848,245
Ensembl chr 8:80,830,939...80,848,707 		JBrowse link
G CALU calumenin ISO mRNA:increased expression:colon (human) RGD PMID:18776587 RGD:2316232 NCBI chr21:97,338,875...97,370,947
Ensembl chr21:97,338,913...97,373,156 		JBrowse link
G CAT catalase treatment ISO RGD PMID:29229353 RGD:127284843 NCBI chr 1:30,792,533...30,828,920
Ensembl chr 1:30,792,399...30,829,592 		JBrowse link
G CBX7 chromobox 7 disease_progression ISO mRNA:decreased expression::colorectum: RGD PMID:22041561 RGD:9587355 NCBI chr19:21,776,618...21,798,525
Ensembl chr19:21,775,931...21,798,309 		JBrowse link
G CD59 CD59 molecule (CD59 blood group) ISO RGD PMID:12909127 RGD:1600485 NCBI chr 1:31,547,876...31,571,720
Ensembl chr 1:31,547,937...31,570,835 		JBrowse link
G CHI3L1 chitinase 3 like 1 severity ISO protein:increased secretion:serum (human) RGD PMID:12124825 RGD:4892637 NCBI chr25:26,160,993...26,169,005
Ensembl chr25:26,160,961...26,169,566 		JBrowse link
G CSF1R colony stimulating factor 1 receptor ISO mRNA:decreased expression:colorectal mucosa (human) RGD PMID:28675510 RGD:150524297 NCBI chr23:52,663,290...52,723,652
Ensembl chr23:52,664,076...52,697,304 		JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 disease_progression ISO mRNA,protein:increased expression:colorectum (human) RGD PMID:18803056 RGD:151893518 NCBI chr10:20,336,470...20,340,308
Ensembl chr10:20,336,247...20,340,309 		JBrowse link
G EFNB2 ephrin B2 ameliorates ISO human cells in mouse model RGD PMID:26494468 RGD:153300950 NCBI chr 3:84,904,421...84,949,292
Ensembl chr 3:84,904,435...84,949,465 		JBrowse link
G EP300 E1A binding protein p300 ISO ClinVar Annotator: match by term: Colorectal carcinoma ClinVar PMID:15706485 PMID:24476420 PMID:25741868 PMID:28492532 NCBI chr19:23,634,132...23,726,095
Ensembl chr19:23,634,571...23,724,979 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO protein:increased expression:large intestine RGD PMID:30214616 RGD:126779593 NCBI chr21:117,380,518...117,515,224
Ensembl chr21:117,380,361...117,421,573 		JBrowse link
G FUBP1 far upstream element binding protein 1 ISO mRNA, protein:increased expression:colorectum (human) RGD PMID:25030436 RGD:151361190 NCBI chr20:55,194,681...55,233,666
Ensembl chr20:55,194,743...55,230,277 		JBrowse link
G GPX2 glutathione peroxidase 2 ISO mRNA:increased expression:colorectum (human) RGD PMID:30469315 RGD:151665806 NCBI chr24:42,151,205...42,155,335 JBrowse link
G GPX3 glutathione peroxidase 3 ISO mRNA:decreased expression:colorectum (human) RGD PMID:30469315 RGD:151665806 NCBI chr23:53,576,950...53,585,321 JBrowse link
G HNRNPM heterogeneous nuclear ribonucleoprotein M disease_progression ISO protein:increased expression:colonic epithelium (human) RGD PMID:24381081 RGD:10054273 NCBI chr 6:7,795,996...7,839,506
Ensembl chr 6:7,796,045...7,839,244 		JBrowse link
G IFNG interferon gamma ISO RGD PMID:16717119 RGD:150573704 NCBI chr11:63,785,493...63,791,071
Ensembl chr11:63,786,041...63,790,473 		JBrowse link
G IL2 interleukin 2 treatment ISO RGD PMID:29229353 RGD:127284843 NCBI chr 7:69,729,635...69,736,279
Ensembl chr 7:69,730,282...69,734,969 		JBrowse link
G IL6 interleukin 6 treatment ISO RGD PMID:29229353 RGD:127284843 NCBI chr21:35,577,513...35,582,385
Ensembl chr21:35,577,939...35,582,237 		JBrowse link
G ITGB3 integrin subunit beta 3 severity ISO RGD PMID:11299820 RGD:5112894 NCBI chr16:59,372,171...59,431,434
Ensembl chr16:59,374,889...59,410,857 		JBrowse link
G JAK2 Janus kinase 2 treatment ISO RGD PMID:29229353 RGD:127284843 NCBI chr12:74,421,243...74,566,766
Ensembl chr12:74,421,016...74,566,710 		JBrowse link
G LOC103224275 glutathione S-transferase Mu 1 ISO RGD PMID:16886896 PMID:26909940 RGD:11564625 RGD:14700936 NCBI chr20:23,854,969...23,861,634 JBrowse link
G MAPK14 mitogen-activated protein kinase 14 treatment
ameliorates 		ISO human cell line in a mouse model RGD PMID:23624232 PMID:25548290 PMID:27286263 RGD:151665352 RGD:151665507 RGD:151665508 NCBI chr17:36,012,164...36,095,542
Ensembl chr17:36,014,454...36,095,138 		JBrowse link
G MBD4 methyl-CpG binding domain 4, DNA glycosylase ISO DNA:insertion, deletion:exon:c.939_940insA, c.939delA (human) RGD PMID:10637515 RGD:9588975 NCBI chr22:51,616,840...51,626,232
Ensembl chr22:51,616,803...51,626,224 		JBrowse link
G MSH3 mutS homolog 3 ISO RGD PMID:9401011 RGD:1625103 NCBI chr 4:74,811,181...75,032,067
Ensembl chr 4:74,811,198...75,032,005 		JBrowse link
G MSH6 mutS homolog 6 ISO RGD PMID:9401011 RGD:1625103 NCBI chr14:59,375,602...59,400,252
Ensembl chr14:59,375,691...59,400,174 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor exacerbates
ameliorates 		ISO mRNA:increased expression:colon (human)
human cell line in a mouse model 		RGD PMID:30221070 PMID:31746347 RGD:150519917 RGD:150520167 NCBI chr15:1,276,804...1,281,811
Ensembl chr15:1,276,798...1,281,166 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ameliorates
disease_progression 		ISO human gene and cell line in a mouse model
protein:increased expression:colorectum, myofibroblast cell, cytoplasm (human) 		RGD PMID:19277704 PMID:25823027 RGD:11085507 RGD:153002577 NCBI chr 8:65,855,232...66,151,733
Ensembl chr 8:65,855,235...66,040,947 		JBrowse link
G NF1 neurofibromin 1 severity ISO protein:increased expression:colorectum (human) RGD PMID:27798892 RGD:150429697 NCBI chr16:24,550,983...24,836,311
Ensembl chr16:24,550,977...24,836,307 		JBrowse link
G PHF6 PHD finger protein 6 ISO mRNA:increased expression:colorectal mucosa (human) RGD PMID:28675510 RGD:150524297 NCBI chr  X:109,531,700...109,595,136
Ensembl chr  X:109,531,726...109,593,854 		JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha severity ISO DNA:mutations:exons: RGD PMID:17546593 RGD:14402406 NCBI chr15:10,218,034...10,304,874
Ensembl chr15:10,218,805...10,294,316 		JBrowse link
G PSMB9 proteasome 20S subunit beta 9 ISO protein: decreased expression RGD PMID:14750179 RGD:6483362 NCBI chr17:39,246,356...39,251,852
Ensembl chr17:39,245,854...39,251,842 		JBrowse link
G PTPRB protein tyrosine phosphatase receptor type B ISO mRNA:increased expression:colon (human) RGD PMID:31040266 RGD:151361283 NCBI chr11:66,095,445...66,222,402
Ensembl chr11:66,101,038...66,221,982 		JBrowse link
G RAC1 Rac family small GTPase 1 exacerbates
ameliorates 		ISO protein:increased expression:colorectum (human)
protein:increased activity:colorectal mucosa (human)
human cell line in a mouse model 		RGD PMID:23559092 PMID:25529012 PMID:30064309 RGD:153298972 RGD:153350124 RGD:153350139 NCBI chr28:15,583,609...15,610,753
Ensembl chr28:15,583,516...15,610,328 		JBrowse link
G RAD21 RAD21 cohesin complex component exacerbates ISO mRNA, protein:increased expression:colorectum (human) RGD PMID:30546056 RGD:150520034 NCBI chr 8:111,486,356...111,515,641
Ensembl chr 8:111,486,048...111,507,729 		JBrowse link
G SELENOH selenoprotein H ISO mRNA:increased expression:colorectum (human) RGD PMID:30469315 RGD:151665806 NCBI chr 1:15,487,429...15,489,066 JBrowse link
G SELENOP selenoprotein P ISO mRNA:decreased expression:colorectum (human) RGD PMID:30469315 RGD:151665806 NCBI chr 4:41,544,098...41,556,152 JBrowse link
G SELENOS selenoprotein S ISO mRNA:decreased expression:colorectum (human) RGD PMID:30469315 RGD:151665806 NCBI chr29:19,727,073...19,732,384
Ensembl chr29:19,726,451...19,732,375 		JBrowse link
G SEPHS2 selenophosphate synthetase 2 ISO mRNA:decreased expression:colorectum (human) RGD PMID:30469315 RGD:151665806 NCBI chr 5:27,130,108...27,132,376 JBrowse link
G SH2B3 SH2B adaptor protein 3 exacerbates ISO protein:decreased expression:colorectum (human) RGD PMID:31706103 RGD:153297781 NCBI chr11:106,657,601...106,703,940
Ensembl chr11:106,670,685...106,700,619 		JBrowse link
G SMAD4 SMAD family member 4 disease_progression ISO RGD PMID:26861460 RGD:21066335 NCBI chr18:29,894,157...29,951,445
Ensembl chr18:29,897,621...29,934,478 		JBrowse link
G SMARCC1 SWI/SNF related BAF chromatin remodeling complex subunit C1 exacerbates ISO protein:increased expression:colorectum (human) RGD PMID:30144500 RGD:151347859 NCBI chr22:8,987,936...9,167,689
Ensembl chr22:8,987,012...9,134,946 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 ISO RGD PMID:16717119 RGD:150573704 NCBI chr 5:10,731,866...10,733,745
Ensembl chr 5:10,732,350...10,732,991 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase severity ISO RGD PMID:11443610 RGD:150521545 NCBI chr 2:26,344,480...26,367,448
Ensembl chr 2:26,343,450...26,367,776 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 treatment ISO RGD PMID:29229353 RGD:127284843 NCBI chr16:63,877,884...63,957,894
Ensembl chr16:63,922,862...63,957,984 		JBrowse link
G STRAP serine/threonine kinase receptor associated protein ISO RGD PMID:16778189 RGD:1581429 NCBI chr11:15,790,449...15,812,964
Ensembl chr11:15,790,798...15,813,585 		JBrowse link
G TP53 tumor protein p53 ISO DNA:missense mutation::p.R72P (human) RGD PMID:29560751 RGD:14995498 NCBI chr16:7,047,686...7,065,567
Ensembl chr16:7,045,146...7,066,223 		JBrowse link
G TXNRD3 thioredoxin reductase 3 ISO mRNA:increased expression:colorectum (human) RGD PMID:30469315 RGD:151665806 NCBI chr22:54,359,169...54,417,126
Ensembl chr22:54,361,034...54,417,397 		JBrowse link
G XPO1 exportin 1 disease_progression ISO protein:increased expression:colorectum (human) RGD PMID:31870117 RGD:151665794 NCBI chr14:45,428,279...45,487,965
Ensembl chr14:45,432,619...45,488,723 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 susceptibility ISO DNA:SNPs:exon 6, exon 10: p.R194W, p.R399Q (human) RGD PMID:28638257 RGD:150539031 NCBI chr 6:37,062,149...37,095,138
Ensembl chr 6:37,060,439...37,095,094 		JBrowse link
descending colon cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KDM5C lysine demethylase 5C onset ISO associate with colorectal cancer;DNA:mutations:multiple (human) RGD PMID:30018131 RGD:151361178 NCBI chr  X:49,306,472...49,356,151
Ensembl chr  X:49,321,173...49,356,100 		JBrowse link
Oligodontia-Colorectal Cancer Syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXIN2 axin 2 ISO ClinVar Annotator: match by term: AXIN2-related attenuated familial adenomatous polyposis | ClinVar Annotator: match by term: Oligodontia-cancer predisposition syndrome
ClinVar Annotator: match by term: AXIN2-related attenuated familial adenomatous polyposis | ClinVar Annotator: match by term: Oligodontia-colorectal cancer syndrome | ClinVar Annotator: match by term: TOOTH AGENESIS-COLORECTAL CANCER SYNDROME 		OMIM
ClinVar		 PMID:9536098 PMID:10330403 PMID:11017067 PMID:12101426 PMID:15042511 More... NCBI chr16:55,874,043...55,906,739
Ensembl chr16:55,874,072...55,907,281 		JBrowse link
G GNA13 G protein subunit alpha 13 ISO ClinVar Annotator: match by term: Oligodontia-cancer predisposition syndrome ClinVar PMID:28492532 NCBI chr16:56,372,146...56,419,754
Ensembl chr16:56,372,276...56,414,827 		JBrowse link
G RGS9 regulator of G protein signaling 9 ISO ClinVar Annotator: match by term: Oligodontia-cancer predisposition syndrome ClinVar PMID:28492532 NCBI chr16:56,199,051...56,291,002
Ensembl chr16:56,199,343...56,288,290 		JBrowse link
rectum adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Rectum adenocarcinoma ClinVar PMID:24033266 PMID:25741868 PMID:26467025 PMID:26530882 PMID:28195569 More... NCBI chr23:15,992,437...16,135,117
Ensembl chr23:16,042,287...16,137,067 		JBrowse link
G BIRC2 baculoviral IAP repeat containing 2 disease_progression ISO mRNA:increased expression:rectum (human) RGD PMID:31964418 RGD:153344516 NCBI chr 1:93,721,449...93,746,638 JBrowse link
G BIRC3 baculoviral IAP repeat containing 3 ameliorates ISO mRNA:increased expression:rectum (human) RGD PMID:31964418 RGD:153344516 NCBI chr 1:93,692,239...93,711,905 JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 ISO mRNA:increased expression:rectum (human) RGD PMID:28486105 RGD:153323299 NCBI chr11:6,603,820...6,641,278
Ensembl chr11:6,602,694...6,640,351 		JBrowse link
G EEF2 eukaryotic translation elongation factor 2 ISO protein:increased expression:rectum (human) RGD PMID:19360331 RGD:153298969 NCBI chr 6:3,733,056...3,742,526
Ensembl chr 6:3,732,425...3,742,826 		JBrowse link
G KDM6A lysine demethylase 6A exacerbates ISO mRNA:decreased expression:rectum (human) RGD PMID:33174323 RGD:150429730 NCBI chr  X:42,053,272...42,291,013
Ensembl chr  X:42,053,336...42,290,526 		JBrowse link
G SLC7A5 solute carrier family 7 member 5 treatment ISO RGD PMID:21036745 RGD:151361202 NCBI chr 5:73,229,953...73,269,801
Ensembl chr 5:73,229,951...73,269,754 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 ISO DNA:missense mutation:CDS: (rs2293152) (human) RGD PMID:22121102 RGD:153323313 NCBI chr16:63,877,884...63,957,894
Ensembl chr16:63,922,862...63,957,984 		JBrowse link
G STAT4 signal transducer and activator of transcription 4 ISO DNA:SNP:intron: (rs3024861) (human) RGD PMID:22121102 RGD:153323313 NCBI chr10:76,553,626...76,708,540
Ensembl chr10:76,553,606...76,674,928 		JBrowse link
G STAT6 signal transducer and activator of transcription 6 ISO DNA:SNP:intron: (rs3024979) (human) RGD PMID:22121102 RGD:153323313 NCBI chr11:53,005,378...53,020,899
Ensembl chr11:53,006,145...53,021,203 		JBrowse link
rectum cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNG2 cyclin G2 ISO mRNA:decreased expression:colon,rectum (human) RGD PMID:27982046 RGD:151361200 NCBI chr 7:25,657,548...25,667,464
Ensembl chr 7:25,657,441...25,666,254 		JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 ISO DNA:missense mutation:CDS p.D140E (rs7479004) (human) RGD PMID:25407497 RGD:153323305 NCBI chr11:6,603,820...6,641,278
Ensembl chr11:6,602,694...6,640,351 		JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 exacerbates ISO protein:increased expression:rectum (human) RGD PMID:24375277 RGD:152023614 NCBI chr10:20,336,470...20,340,308
Ensembl chr10:20,336,247...20,340,309 		JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 susceptibility ISO DNA:SNP:intron: (rs6022999) (human) RGD PMID:31740231 RGD:151665338 NCBI chr 2:9,868,794...9,889,510
Ensembl chr 2:9,868,678...9,885,884 		JBrowse link
G GPX3 glutathione peroxidase 3 susceptibility ISO DNA:SNPs: (rs3828599, rs736775, rs8177447) (human) RGD PMID:22371331 RGD:151665750 NCBI chr23:53,576,950...53,585,321 JBrowse link
G IL6 interleukin 6 treatment ISO RGD PMID:28272402 RGD:14975288 NCBI chr21:35,577,513...35,582,385
Ensembl chr21:35,577,939...35,582,237 		JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 susceptibility
treatment 		ISO DNA:SNP:intron: (rs43184) (human)
DNA:SNP:intron: (rs2548663) (human) 		RGD PMID:23027623 PMID:23859041 RGD:13217411 RGD:150573807 NCBI chr 4:53,040,731...53,120,784
Ensembl chr 4:53,084,023...53,120,772 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 susceptibility ISO DNA:SNPs:introns: (rs851011, rs851006) (human) RGD PMID:23859041 RGD:150573807 NCBI chr17:36,012,164...36,095,542
Ensembl chr17:36,014,454...36,095,138 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease susceptibility ISO DNA:SNP:3'utr: (rs2155209) (human) RGD PMID:26735576 RGD:151361212 NCBI chr 1:85,615,448...85,694,247
Ensembl chr 1:85,610,819...85,694,269 		JBrowse link
G NBN nibrin susceptibility ISO DNA:SNP:3'utr: (rs14448) (human) RGD PMID:26735576 RGD:151361212 NCBI chr 8:85,017,807...85,069,219
Ensembl chr 8:85,015,752...85,069,028 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 susceptibility ISO DNA:SNP:3'utr: (rs1051677) (human) RGD PMID:26735576 RGD:151361212 NCBI chr10:101,952,909...102,051,059
Ensembl chr10:101,953,067...102,049,964 		JBrowse link
sigmoid colon cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Sigmoid colon cancer ClinVar PMID:25741868 PMID:28492532 NCBI chr23:15,992,437...16,135,117
Ensembl chr23:16,042,287...16,137,067 		JBrowse link
G FBXO11 F-box protein 11 ISO ClinVar Annotator: match by term: Sigmoid colon cancer ClinVar PMID:9354786 PMID:12376507 PMID:18809606 PMID:19924528 PMID:20176959 More... NCBI chr14:59,276,380...59,375,635
Ensembl chr14:59,276,447...59,374,442 		JBrowse link
G MSH2 mutS homolog 2 ISO ClinVar Annotator: match by term: Sigmoid colon cancer ClinVar PMID:10495924 PMID:12658575 PMID:15849733 PMID:17312306 PMID:18566915 More... NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819 		JBrowse link
G MSH6 mutS homolog 6 ISO ClinVar Annotator: match by term: Sigmoid colon cancer ClinVar PMID:9354786 PMID:12376507 PMID:18809606 PMID:19924528 PMID:20176959 More... NCBI chr14:59,375,602...59,400,252
Ensembl chr14:59,375,691...59,400,174 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15420
    disease of anatomical entity 15083
      gastrointestinal system disease 6470
        Gastrointestinal Neoplasms 3505
          gastrointestinal system cancer 2750
            intestinal cancer 932
              large intestine cancer 931
                anal canal cancer + 0
                anus cancer + 0
                cecum cancer + 0
                colorectal cancer + 931
                large intestine adenocarcinoma + 66
Path 2
Term Annotations click to browse term
  disease 15420
    disease of cellular proliferation 7320
      Neoplasms by Site 6783
        Digestive System Neoplasms 3622
          Gastrointestinal Neoplasms 3505
            gastrointestinal system cancer 2750
              intestinal cancer 932
                large intestine cancer 931
                  anal canal cancer + 0
                  anus cancer + 0
                  cecum cancer + 0
                  colorectal cancer + 931
                  large intestine adenocarcinoma + 66
paths to the root