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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:bile duct adenoma
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Accession:DOID:5381 term browser browse the term
Definition:A biliary tract benign neoplasm that results_in a small firm white nodule with multiple bile ducts that are located_in a fibrous stroma. (DO)
Synonyms:exact_synonym: Bile Duct Adenomas;   Cholangioma;   Cholangiomas;   cholangioadenoma
 primary_id: MESH:D002759
 xref: EFO:1000123;   ICDO:8160/0;   NCI:C2942
For additional species annotation, visit the Alliance of Genome Resources.


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bile duct adenoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Braf B-Raf proto-oncogene, serine/threonine kinase IAGP DNA:missense mutation:cds:p.V600E (human) RGD PMID:25704541 RGD:11521169 NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 19137
    disease of cellular proliferation 7889
      Neoplasms by Histologic Type 5346
        Glandular and Epithelial Neoplasms 3801
          adenoma 718
            bile duct adenoma 1
              bile duct cystadenoma + 0
              extrahepatic bile duct adenoma + 0
              intrahepatic bile duct adenoma + 0
Path 2
Term Annotations click to browse term
  disease 19137
    disease of cellular proliferation 7889
      Neoplasms by Site 7331
        Digestive System Neoplasms 3849
          Gastrointestinal Neoplasms 3725
            gastrointestinal system benign neoplasm 235
              hepatobiliary benign neoplasm 183
                biliary tract benign neoplasm 154
                  Bile Duct Neoplasms 151
                    bile duct adenoma 1
                      bile duct cystadenoma + 0
                      extrahepatic bile duct adenoma + 0
                      intrahepatic bile duct adenoma + 0
paths to the root