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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:rapidly progressive glomerulonephritis
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Accession:DOID:4776 term browser browse the term
Synonyms:xref: ICD10CM:N01;   NCI:C35264
For additional species annotation, visit the Alliance of Genome Resources.



show annotations for term's descendants           Sort by:
crescentic glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl2 C-C motif chemokine ligand 2 treatment ISO RGD PMID:8903512 PMID:17314328 RGD:8549743, RGD:8549770 NCBI chr11:81,926,403...81,928,278
Ensembl chr11:81,926,397...81,928,279
JBrowse link
G Ccl3 C-C motif chemokine ligand 3 ISO associated with Anti-Neutrophil Cytoplasmic Antibody-Associated Vasculitis RGD PMID:18846416 PMID:17898087 RGD:7241813, RGD:2307059 NCBI chr11:83,538,669...83,540,204
Ensembl chr11:83,538,670...83,540,181
JBrowse link
G Cd40 CD40 antigen IMP RGD PMID:14569091 RGD:7248599 NCBI chr 2:164,897,535...164,913,574
Ensembl chr 2:164,897,547...164,914,868
JBrowse link
G Cd40lg CD40 ligand treatment IMP RGD PMID:14569091 RGD:7248599 NCBI chr  X:56,257,448...56,269,402
Ensembl chr  X:56,257,503...56,269,402
JBrowse link
G Csf1r colony stimulating factor 1 receptor treatment ISO RGD PMID:23408165 RGD:151665815 NCBI chr18:61,238,644...61,264,211
Ensembl chr18:61,233,670...61,265,221
JBrowse link
G Fcgr3 Fc receptor, IgG, low affinity III ISO DNA:CNV:3'UTR: RGD PMID:16482158 RGD:2293335 NCBI chr 1:170,878,738...170,893,477
Ensembl chr 1:170,878,743...170,892,504
JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:19959716 RGD:7175502 NCBI chr 2:129,206,490...129,213,059
Ensembl chr 2:129,206,490...129,213,059
JBrowse link
G Il1rn interleukin 1 receptor antagonist treatment ISO human protein in a rat model RGD PMID:7637259 RGD:8551712 NCBI chr 2:24,226,872...24,241,503
Ensembl chr 2:24,226,865...24,241,506
JBrowse link
G Jund jun D proto-oncogene ISO RGD PMID:18443593 RGD:2293336 NCBI chr 8:71,150,389...71,153,265
Ensembl chr 8:71,151,599...71,153,265
JBrowse link
G Mmp12 matrix metallopeptidase 12 ISO RGD PMID:20488952 PMID:12626598 RGD:2325762, RGD:737630 NCBI chr 9:7,344,397...7,360,461
Ensembl chr 9:7,344,381...7,369,499
JBrowse link
G Mmp3 matrix metallopeptidase 3 ISO RGD PMID:11095647 RGD:7241255 NCBI chr 9:7,445,845...7,455,975
Ensembl chr 9:7,445,822...7,455,975
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO protein:increased expression:renal cortex (rat) RGD PMID:16046515 RGD:2313720 NCBI chr 2:164,782,246...164,797,770
Ensembl chr 2:164,782,700...164,797,770
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO RGD PMID:21403644 RGD:7245940 NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140
JBrowse link
G Stat6 signal transducer and activator of transcription 6 IMP RGD PMID:21985369 RGD:7243976 NCBI chr10:127,478,855...127,496,856
Ensembl chr10:127,478,855...127,496,826
JBrowse link
G Tlr9 toll-like receptor 9 severity IMP RGD PMID:20847283 RGD:7246899 NCBI chr 9:106,099,797...106,104,075
Ensembl chr 9:106,099,797...106,104,082
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16271
    disease of anatomical entity 15862
      Immune & Inflammatory Diseases 5360
        Inflammation 2604
          nephritis 423
            glomerulonephritis 369
              rapidly progressive glomerulonephritis 15
                Rapidly Progressive Glomerulonephritis with Pulmonary Hemorrhage 0
                crescentic glomerulonephritis 15
Path 2
Term Annotations click to browse term
  disease 16271
    disease of anatomical entity 15862
      Urogenital Diseases 5059
        urinary system disease 2507
          kidney disease 2255
            nephritis 423
              glomerulonephritis 369
                rapidly progressive glomerulonephritis 15
                  Rapidly Progressive Glomerulonephritis with Pulmonary Hemorrhage 0
                  crescentic glomerulonephritis 15
paths to the root